File accession File format Output type Experiment accession Assay Biosample term id Biosample term name Biosample type Biosample life stage Biosample sex Biosample Age Biosample organism Biosample treatments Biosample subcellular fraction term name Biosample phase Biosample synchronization stage Experiment target Antibody accession Library made from Library depleted in Library extraction method Library lysis method Library crosslinking method Library strand specific Experiment date released Project RBNS protein concentration Library fragmentation method Library size range Biological replicate(s) Technical replicate Read length Mapped read length Run type Paired end Paired with Derived from Size Lab md5sum dbxrefs File download URL Assembly Platform Controlled by File Status Audit WARNING Audit INTERNAL_ACTION Audit NOT_COMPLIANT Audit ERROR ENCFF000PQO bam alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PRD 837770198 Richard Myers, HAIB 904c60c41de8902725b1dbf2c5023954 https://www.encodeproject.org/files/ENCFF000PQO/@@download/ENCFF000PQO.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PQQ bigBed broadPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHS 360482 Richard Myers, HAIB 9d20785070ad500ab8da6d782fe65be8 https://www.encodeproject.org/files/ENCFF000PQQ/@@download/ENCFF000PQQ.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PQR bigBed broadPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHT 367806 Richard Myers, HAIB b75053d433a7817723b9abe5e9540fc3 https://www.encodeproject.org/files/ENCFF000PQR/@@download/ENCFF000PQR.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PQS bam alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PRB 618533308 Richard Myers, HAIB 59f601ed123ff1e9796f9f6e219e216c https://www.encodeproject.org/files/ENCFF000PQS/@@download/ENCFF000PQS.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PQT bigWig raw signal ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 66760316 Richard Myers, HAIB 309df2c50011062abf0e1fd73bf02c1b https://www.encodeproject.org/files/ENCFF000PQT/@@download/ENCFF000PQT.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PQV bigWig raw signal ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 54236531 Richard Myers, HAIB 2d7fd38e258111241ec2bc716db5b675 https://www.encodeproject.org/files/ENCFF000PQV/@@download/ENCFF000PQV.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PRB fastq reads ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 987165474 Richard Myers, HAIB 9ed041a12408cb8d80fceed685c7f51f https://www.encodeproject.org/files/ENCFF000PRB/@@download/ENCFF000PRB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POQ/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PRD fastq reads ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1433400854 Richard Myers, HAIB 02e1fd0f16a4a0bbb446a9c2ce51d11d https://www.encodeproject.org/files/ENCFF000PRD/@@download/ENCFF000PRD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POO/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UHS bed broadPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 182194 Richard Myers, HAIB 8c43249891e9ab4f869842b225bba31b https://www.encodeproject.org/files/ENCFF001UHS/@@download/ENCFF001UHS.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UHT bed broadPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 199130 Richard Myers, HAIB ed47a2448920a88b16add0956c3b76f8 https://www.encodeproject.org/files/ENCFF001UHT/@@download/ENCFF001UHT.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CLE bed narrowPeak optimal idr thresholded peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 346642 ENCODE Consortium Analysis Working Group fff8ca7b7979ca058d515c69e974c367 https://www.encodeproject.org/files/ENCFF002CLE/@@download/ENCFF002CLE.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF460ZRI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE ENCFF002CLE 944789 ENCODE Consortium 12ff96e7ea0a96019aac3c3a0831bb99 https://www.encodeproject.org/files/ENCFF460ZRI/@@download/ENCFF460ZRI.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF446TLJ bam alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PRB, ENCFF643CGH 398380900 ENCODE Processing Pipeline 0669c60d4c99ac197a5838cedec8d3d5 https://www.encodeproject.org/files/ENCFF446TLJ/@@download/ENCFF446TLJ.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF765NFJ bam alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PRD, ENCFF643CGH 552890628 ENCODE Processing Pipeline c17d13bf3339bdebb3b824bab11d6399 https://www.encodeproject.org/files/ENCFF765NFJ/@@download/ENCFF765NFJ.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF486FRS bam unfiltered alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PRB, ENCFF643CGH 1211019015 ENCODE Processing Pipeline 4009ff0f1e60ff73ff8d8863e8c2b97a https://www.encodeproject.org/files/ENCFF486FRS/@@download/ENCFF486FRS.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF279GXK bam unfiltered alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PRD, ENCFF643CGH 1741297102 ENCODE Processing Pipeline 88d9e1438a98a3f0d09fc035de53358c https://www.encodeproject.org/files/ENCFF279GXK/@@download/ENCFF279GXK.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF262TII bam alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PRB, ENCFF807MUK 398590956 ENCODE Processing Pipeline 24b83281ca0401b087bc93eac85d3693 https://www.encodeproject.org/files/ENCFF262TII/@@download/ENCFF262TII.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF403HYD bam unfiltered alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PRB, ENCFF807MUK 1208395274 ENCODE Processing Pipeline 55f556465a6b2ba5bc72bff06c48800f https://www.encodeproject.org/files/ENCFF403HYD/@@download/ENCFF403HYD.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF388UBE bam alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PRD, ENCFF807MUK 553190048 ENCODE Processing Pipeline dce0a560258678c452ac0edc6ea8d2c4 https://www.encodeproject.org/files/ENCFF388UBE/@@download/ENCFF388UBE.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF238YOA bam unfiltered alignments ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PRD, ENCFF807MUK 1737748791 ENCODE Processing Pipeline 83899478ab778d231b2e3200aa103d7e https://www.encodeproject.org/files/ENCFF238YOA/@@download/ENCFF238YOA.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF355CGV bigWig signal p-value ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF249PQD, ENCFF446TLJ, ENCFF741TQN 475048639 ENCODE Processing Pipeline b6d606bc0b4caa08add9133b01f963b6 https://www.encodeproject.org/files/ENCFF355CGV/@@download/ENCFF355CGV.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF309MID bigWig signal p-value ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF741TQN, ENCFF765NFJ 435226026 ENCODE Processing Pipeline 10a9e993940e581a802f86c17a38a86d https://www.encodeproject.org/files/ENCFF309MID/@@download/ENCFF309MID.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF602TXA bigWig signal p-value ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249PQD, ENCFF446TLJ, ENCFF741TQN, ENCFF765NFJ 505773423 ENCODE Processing Pipeline 03e1b0021cf842f6d1f66130b7b0364e https://www.encodeproject.org/files/ENCFF602TXA/@@download/ENCFF602TXA.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF932WOC bigWig fold change over control ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF741TQN, ENCFF765NFJ 317808827 ENCODE Processing Pipeline 5ee0edc1297504aa97ed392131b646b8 https://www.encodeproject.org/files/ENCFF932WOC/@@download/ENCFF932WOC.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF185KAS bigWig fold change over control ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF249PQD, ENCFF446TLJ, ENCFF741TQN 290540053 ENCODE Processing Pipeline 7346b600ac00501c4eef58d1a08d232b https://www.encodeproject.org/files/ENCFF185KAS/@@download/ENCFF185KAS.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF066KEN bigWig fold change over control ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249PQD, ENCFF446TLJ, ENCFF741TQN, ENCFF765NFJ 493662745 ENCODE Processing Pipeline 7f3b7532116ff9117ade2c62180d41c7 https://www.encodeproject.org/files/ENCFF066KEN/@@download/ENCFF066KEN.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF242XLD bed narrowPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF741TQN, ENCFF765NFJ 5464521 ENCODE Processing Pipeline 1d00b436a9fb979676abcb3f83ed65b1 https://www.encodeproject.org/files/ENCFF242XLD/@@download/ENCFF242XLD.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF391NCE bed narrowPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF249PQD, ENCFF446TLJ, ENCFF741TQN 5460494 ENCODE Processing Pipeline bee226fa9de4ef50059d51fb95804ada https://www.encodeproject.org/files/ENCFF391NCE/@@download/ENCFF391NCE.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF976LVG bed narrowPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249PQD, ENCFF446TLJ, ENCFF741TQN, ENCFF765NFJ 6226210 ENCODE Processing Pipeline bb4ff69cae1d6cafa29045e3016b3836 https://www.encodeproject.org/files/ENCFF976LVG/@@download/ENCFF976LVG.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF701FPS bigBed narrowPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF242XLD 12935964 ENCODE Processing Pipeline ee5e744c9d53d40a842b62f2779393fe https://www.encodeproject.org/files/ENCFF701FPS/@@download/ENCFF701FPS.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF871STF bed narrowPeak conservative idr thresholded peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF242XLD, ENCFF391NCE, ENCFF419RSJ, ENCFF976LVG 290775 ENCODE Processing Pipeline e2962adbbc1cfd09e8ed851114568309 https://www.encodeproject.org/files/ENCFF871STF/@@download/ENCFF871STF.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF895FGD bigBed narrowPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF391NCE 12949238 ENCODE Processing Pipeline b533e929a4d9e9d3adef6bfc3812000f https://www.encodeproject.org/files/ENCFF895FGD/@@download/ENCFF895FGD.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF023DDD bigBed narrowPeak peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF976LVG 13195252 ENCODE Processing Pipeline d25bba793df97b35321cbe4b8e9c50a6 https://www.encodeproject.org/files/ENCFF023DDD/@@download/ENCFF023DDD.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF234TBW bed narrowPeak optimal idr thresholded peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF242XLD, ENCFF391NCE, ENCFF419RSJ, ENCFF976LVG 297220 ENCODE Processing Pipeline d5e0251abcd3f4807e1080c7dee2796e https://www.encodeproject.org/files/ENCFF234TBW/@@download/ENCFF234TBW.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF887YWN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234TBW 671976 ENCODE Processing Pipeline 5eb16d4edab03a0b170d19d44550186d https://www.encodeproject.org/files/ENCFF887YWN/@@download/ENCFF887YWN.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF932DWJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF871STF 663221 ENCODE Processing Pipeline c2d98b3cbfbced6dd16150f68e206a03 https://www.encodeproject.org/files/ENCFF932DWJ/@@download/ENCFF932DWJ.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF784WOU fastq reads ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF258KHA 1614380646 Richard Myers, HAIB 7bc00f6239413a101b3a170dca9f6b97 https://www.encodeproject.org/files/ENCFF784WOU/@@download/ENCFF784WOU.fastq.gz HiSeq 2000 /files/ENCFF698GOD/ released antibody characterized with exemption experiment not submitted to GEO ENCFF258KHA fastq reads ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF784WOU 1684754346 Richard Myers, HAIB 6e5fa58b1599bcfe810f89fb8dc2965b https://www.encodeproject.org/files/ENCFF258KHA/@@download/ENCFF258KHA.fastq.gz HiSeq 2000 /files/ENCFF051ZTX/ released antibody characterized with exemption experiment not submitted to GEO ENCFF415EFI bam unfiltered alignments ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF258KHA, ENCFF784WOU, ENCFF807MUK 3977314383 ENCODE Processing Pipeline bfc1dcd1f64598d088a03f1e6c649186 https://www.encodeproject.org/files/ENCFF415EFI/@@download/ENCFF415EFI.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF957ANO bam unfiltered alignments ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF258KHA, ENCFF643CGH, ENCFF784WOU 3987083552 ENCODE Processing Pipeline 258c371c9a862f3c3d5bde911436b84c https://www.encodeproject.org/files/ENCFF957ANO/@@download/ENCFF957ANO.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF241EOY bam alignments ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF258KHA, ENCFF784WOU, ENCFF807MUK 2954555267 ENCODE Processing Pipeline f07c6a7c717ba5517d54297a0aacc295 https://www.encodeproject.org/files/ENCFF241EOY/@@download/ENCFF241EOY.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF665YIS bam alignments ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF258KHA, ENCFF643CGH, ENCFF784WOU 2954908399 ENCODE Processing Pipeline fe6df9d044100c34defb3ec76c5cc60d https://www.encodeproject.org/files/ENCFF665YIS/@@download/ENCFF665YIS.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF385QPB bigWig fold change over control ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF485SVR, ENCFF665YIS 941316499 ENCODE Processing Pipeline ccbfaa660c051cfc7ccee80babc33c14 https://www.encodeproject.org/files/ENCFF385QPB/@@download/ENCFF385QPB.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF755ATB bed narrowPeak peaks ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF485SVR, ENCFF665YIS 7039081 ENCODE Processing Pipeline 13aa71882fa5d689ef86aaccafa57ffa https://www.encodeproject.org/files/ENCFF755ATB/@@download/ENCFF755ATB.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF089AQW bigWig signal p-value ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF485SVR, ENCFF665YIS 1205005070 ENCODE Processing Pipeline 5ca3f27b2bb336bffb8fcb88ab40a717 https://www.encodeproject.org/files/ENCFF089AQW/@@download/ENCFF089AQW.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF699AQZ bigWig signal p-value ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF241EOY, ENCFF339SFQ 1299659901 ENCODE Processing Pipeline 2dac65b379b1181288074f39e68bbe62 https://www.encodeproject.org/files/ENCFF699AQZ/@@download/ENCFF699AQZ.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF391YXI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF755ATB 553554 ENCODE Processing Pipeline ac3399d696dbae17d0085977cf3f44a6 https://www.encodeproject.org/files/ENCFF391YXI/@@download/ENCFF391YXI.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF440KFY bigBed narrowPeak peaks ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF755ATB 13109880 ENCODE Processing Pipeline edb7f6dd5d176f7fd440f689d40c185d https://www.encodeproject.org/files/ENCFF440KFY/@@download/ENCFF440KFY.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF735PIC bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF391YXI 1111723 ENCODE Processing Pipeline 7b352427913c96b5a3b6451bef7c49d9 https://www.encodeproject.org/files/ENCFF735PIC/@@download/ENCFF735PIC.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF983AVN bed narrowPeak peaks ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF241EOY, ENCFF339SFQ 6959954 ENCODE Processing Pipeline 8cc99a44030761bd1e07ff83ba567fdb https://www.encodeproject.org/files/ENCFF983AVN/@@download/ENCFF983AVN.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF506QKU bigWig fold change over control ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF241EOY, ENCFF339SFQ 949287855 ENCODE Processing Pipeline 11e6d829a356533ec253855db66cc64c https://www.encodeproject.org/files/ENCFF506QKU/@@download/ENCFF506QKU.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF525NFF bigBed narrowPeak peaks ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF983AVN 13014597 ENCODE Processing Pipeline 3de533e334466edbe1ff47830988fad5 https://www.encodeproject.org/files/ENCFF525NFF/@@download/ENCFF525NFF.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF092KCB bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF983AVN 525809 ENCODE Processing Pipeline cb09b8fadefcb1b8a1b8293040add3e9 https://www.encodeproject.org/files/ENCFF092KCB/@@download/ENCFF092KCB.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF545GZQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR939FGB ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF092KCB 1071840 ENCODE Processing Pipeline 6143bdbd67bda18cc12afe5df64f6a5c https://www.encodeproject.org/files/ENCFF545GZQ/@@download/ENCFF545GZQ.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF000NND bam alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NNM 634886012 Richard Myers, HAIB 3536a8d380cb292b78604e7a0cc81f6b https://www.encodeproject.org/files/ENCFF000NND/@@download/ENCFF000NND.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NNE bam alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NNN 767928855 Richard Myers, HAIB 1ca1d8a11bf0f8189e4e93b69c57603f https://www.encodeproject.org/files/ENCFF000NNE/@@download/ENCFF000NNE.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NNG bigWig raw signal ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 1794847 Richard Myers, HAIB 09918c5994c271ac4b4cf3333ae36cfa https://www.encodeproject.org/files/ENCFF000NNG/@@download/ENCFF000NNG.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NNI bigWig raw signal ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 11380084 Richard Myers, HAIB 46e2e1a9e7d63f589b93d9c986cb2a54 https://www.encodeproject.org/files/ENCFF000NNI/@@download/ENCFF000NNI.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NNM fastq reads ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 824578556 Richard Myers, HAIB 087fd5d087a576d271e0c56a6a489675 https://www.encodeproject.org/files/ENCFF000NNM/@@download/ENCFF000NNM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NPN/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NNN fastq reads ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1149407100 Richard Myers, HAIB 2f2d8f9b6b3a9c0455c7bee060da448f https://www.encodeproject.org/files/ENCFF000NNN/@@download/ENCFF000NNN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NPN/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF321ZKP bam unfiltered alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NNM, ENCFF807MUK 1058503508 ENCODE Processing Pipeline e755dace22f77989ca915a6c86f66500 https://www.encodeproject.org/files/ENCFF321ZKP/@@download/ENCFF321ZKP.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF102JFM bam alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NNM, ENCFF807MUK 591773368 ENCODE Processing Pipeline 082d838537191d4d1e387750c4315e1d https://www.encodeproject.org/files/ENCFF102JFM/@@download/ENCFF102JFM.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF335PLH bam unfiltered alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NNN, ENCFF807MUK 1392035901 ENCODE Processing Pipeline 7c4e0591cf901931b88a6f3009bbeacc https://www.encodeproject.org/files/ENCFF335PLH/@@download/ENCFF335PLH.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF174UCM bam alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NNN, ENCFF807MUK 556291517 ENCODE Processing Pipeline 51f67e120b1fc56ddb937a76a2b8ca78 https://www.encodeproject.org/files/ENCFF174UCM/@@download/ENCFF174UCM.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF566HYM bam unfiltered alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NNM, ENCFF643CGH 1062303677 ENCODE Processing Pipeline a4ff330dc81f51436af344d1ce5048da https://www.encodeproject.org/files/ENCFF566HYM/@@download/ENCFF566HYM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF298AEN bam unfiltered alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NNN, ENCFF643CGH 1395731526 ENCODE Processing Pipeline 57f5f5ceb66ad20dbc30e2ede43d6cab https://www.encodeproject.org/files/ENCFF298AEN/@@download/ENCFF298AEN.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF942JER bam alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NNM, ENCFF643CGH 591404416 ENCODE Processing Pipeline a9c685372416fddf26c354053db3d295 https://www.encodeproject.org/files/ENCFF942JER/@@download/ENCFF942JER.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF428QRM bam alignments ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NNN, ENCFF643CGH 555873426 ENCODE Processing Pipeline a57dfb67c40acc7b2990e1f6952ebc40 https://www.encodeproject.org/files/ENCFF428QRM/@@download/ENCFF428QRM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF074YTR bigWig signal p-value ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF102JFM, ENCFF279XQE 397522041 ENCODE Processing Pipeline 3c8e61aa2035292dba0f22418b282e82 https://www.encodeproject.org/files/ENCFF074YTR/@@download/ENCFF074YTR.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF896KEY bigWig fold change over control ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF174UCM, ENCFF279XQE 283553677 ENCODE Processing Pipeline e6fc352047ff699e53e452ed986316d7 https://www.encodeproject.org/files/ENCFF896KEY/@@download/ENCFF896KEY.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF889YTC bigWig signal p-value ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF174UCM, ENCFF279XQE 458434134 ENCODE Processing Pipeline 8ac7afe610836572f34b72bae9b0717d https://www.encodeproject.org/files/ENCFF889YTC/@@download/ENCFF889YTC.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF669JMJ bigWig signal p-value ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF102JFM, ENCFF174UCM, ENCFF279XQE 522293610 ENCODE Processing Pipeline 9c948c359fb6047469e349c0309b89c1 https://www.encodeproject.org/files/ENCFF669JMJ/@@download/ENCFF669JMJ.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF931GKJ bigWig fold change over control ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF102JFM, ENCFF279XQE 287381830 ENCODE Processing Pipeline 2d8c4d436c3bbd24dcf4668aed692283 https://www.encodeproject.org/files/ENCFF931GKJ/@@download/ENCFF931GKJ.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF775CUL bigWig fold change over control ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF102JFM, ENCFF174UCM, ENCFF279XQE 492943419 ENCODE Processing Pipeline c16499397b6cafc5f776d17f4f4aad01 https://www.encodeproject.org/files/ENCFF775CUL/@@download/ENCFF775CUL.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF471HFA bed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF102JFM, ENCFF279XQE 3936542 ENCODE Processing Pipeline 48ba54da133e20845e8b851440f51c27 https://www.encodeproject.org/files/ENCFF471HFA/@@download/ENCFF471HFA.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF010JFS bed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF174UCM, ENCFF279XQE 3817595 ENCODE Processing Pipeline d047b2eb22a8539fbf3fde04c865fb9b https://www.encodeproject.org/files/ENCFF010JFS/@@download/ENCFF010JFS.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF093PHA bed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF102JFM, ENCFF174UCM, ENCFF279XQE 4497244 ENCODE Processing Pipeline d83ebb2f3d2da080bd5a1555371b2242 https://www.encodeproject.org/files/ENCFF093PHA/@@download/ENCFF093PHA.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF533YAW bigBed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF471HFA 8548755 ENCODE Processing Pipeline 9ae76be12b0473d6ac11e0ac56b77b14 https://www.encodeproject.org/files/ENCFF533YAW/@@download/ENCFF533YAW.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF821VRU bigBed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF010JFS 8266707 ENCODE Processing Pipeline d20c653f9bbd93a8447cf0e6ea29989d https://www.encodeproject.org/files/ENCFF821VRU/@@download/ENCFF821VRU.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF071FRX bigBed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF093PHA 10992416 ENCODE Processing Pipeline f302422cf9e225d92af8d550461aedda https://www.encodeproject.org/files/ENCFF071FRX/@@download/ENCFF071FRX.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF092AEQ bed narrowPeak conservative idr thresholded peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF010JFS, ENCFF093PHA, ENCFF471HFA 44953 ENCODE Processing Pipeline 499cf0de28c2d212d7beffacd66ec69b https://www.encodeproject.org/files/ENCFF092AEQ/@@download/ENCFF092AEQ.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF197OYO bigWig signal p-value ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF016HFH, ENCFF428QRM, ENCFF942JER 522976962 ENCODE Processing Pipeline 9dbab89e2de6c9e0bdf45bc96cfa2a23 https://www.encodeproject.org/files/ENCFF197OYO/@@download/ENCFF197OYO.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF686MSC bed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF016HFH, ENCFF428QRM, ENCFF942JER 4421486 ENCODE Processing Pipeline 2d3632990f00c484216d295f359908c5 https://www.encodeproject.org/files/ENCFF686MSC/@@download/ENCFF686MSC.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF519BOO bed narrowPeak optimal idr thresholded peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF128IZX, ENCFF419RSJ, ENCFF510QJQ, ENCFF686MSC 53706 ENCODE Processing Pipeline 2fb7112b8e996a10273ec8d4c495d22f https://www.encodeproject.org/files/ENCFF519BOO/@@download/ENCFF519BOO.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF932TIR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF092AEQ 136420 ENCODE Processing Pipeline 37c273bc756f727ef4da34c9c9541194 https://www.encodeproject.org/files/ENCFF932TIR/@@download/ENCFF932TIR.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF678XAK bigWig fold change over control ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF016HFH, ENCFF428QRM 283537939 ENCODE Processing Pipeline 39e3cafdc25b8e5b9b124e94e8fafc70 https://www.encodeproject.org/files/ENCFF678XAK/@@download/ENCFF678XAK.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF577EAZ bigWig fold change over control ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF016HFH, ENCFF428QRM, ENCFF942JER 491712764 ENCODE Processing Pipeline 365f65ecc7bc7916aeaee30bbecebf93 https://www.encodeproject.org/files/ENCFF577EAZ/@@download/ENCFF577EAZ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF510QJQ bed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF016HFH, ENCFF428QRM 3758228 ENCODE Processing Pipeline 854ef0074f1ba24a7520b6f76b4a33ee https://www.encodeproject.org/files/ENCFF510QJQ/@@download/ENCFF510QJQ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF200LMD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF097XOQ 134689 ENCODE Processing Pipeline 955c3a5f94a4a8e8edff037baee86b87 https://www.encodeproject.org/files/ENCFF200LMD/@@download/ENCFF200LMD.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF750JOB bed narrowPeak optimal idr thresholded peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF010JFS, ENCFF093PHA, ENCFF471HFA 59329 ENCODE Processing Pipeline be4b0fd390fa5e9646dcb71a49dd1488 https://www.encodeproject.org/files/ENCFF750JOB/@@download/ENCFF750JOB.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF667MOB bigWig fold change over control ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF016HFH, ENCFF942JER 284477265 ENCODE Processing Pipeline c004e7b061e7b02192f0c3b9358116f6 https://www.encodeproject.org/files/ENCFF667MOB/@@download/ENCFF667MOB.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF128IZX bed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF016HFH, ENCFF942JER 3829615 ENCODE Processing Pipeline 7cf93063d26e97afc3f1bd47e426d6ef https://www.encodeproject.org/files/ENCFF128IZX/@@download/ENCFF128IZX.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF398TNU bigBed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF686MSC 10972096 ENCODE Processing Pipeline cee9529ae8fe74cf822653f3d8741db5 https://www.encodeproject.org/files/ENCFF398TNU/@@download/ENCFF398TNU.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF140HEE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF519BOO 150077 ENCODE Processing Pipeline 35b2a77fb5066783a0a6ca302ab4a554 https://www.encodeproject.org/files/ENCFF140HEE/@@download/ENCFF140HEE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF323ITU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF750JOB 157626 ENCODE Processing Pipeline e3eaf7652086c31b05144d4630e9f25e https://www.encodeproject.org/files/ENCFF323ITU/@@download/ENCFF323ITU.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF542ELY bigWig signal p-value ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF016HFH, ENCFF942JER 482278404 ENCODE Processing Pipeline 0366b7750a34783e6f09c45cf22a9c79 https://www.encodeproject.org/files/ENCFF542ELY/@@download/ENCFF542ELY.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF931DOM bigWig signal p-value ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF016HFH, ENCFF428QRM 529810671 ENCODE Processing Pipeline 0426a5a5301dd022cc80ec729212888f https://www.encodeproject.org/files/ENCFF931DOM/@@download/ENCFF931DOM.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF067REJ bigBed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF128IZX 8327733 ENCODE Processing Pipeline 801f2064e47c8ab5db75e900ccf5c2aa https://www.encodeproject.org/files/ENCFF067REJ/@@download/ENCFF067REJ.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF097XOQ bed narrowPeak conservative idr thresholded peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF128IZX, ENCFF419RSJ, ENCFF510QJQ, ENCFF686MSC 43198 ENCODE Processing Pipeline ef7645500210f5f6d37e0f2f225e7a04 https://www.encodeproject.org/files/ENCFF097XOQ/@@download/ENCFF097XOQ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF307RGE bigBed narrowPeak peaks ENCSR000BLB ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF510QJQ 8194074 ENCODE Processing Pipeline 56af181ac1c54d805adee3f19bddc007 https://www.encodeproject.org/files/ENCFF307RGE/@@download/ENCFF307RGE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PYL bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 822323706 Richard Myers, HAIB 4b50d6ec5a461cb8e7a21df588cda8aa https://www.encodeproject.org/files/ENCFF000PYL/@@download/ENCFF000PYL.bam hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PYM bigBed broadPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJP 462103 Richard Myers, HAIB 5a4267440ca02043d34a40286865b120 https://www.encodeproject.org/files/ENCFF000PYM/@@download/ENCFF000PYM.bigBed hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PYN bigBed broadPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJQ 1249083 Richard Myers, HAIB 8b8f1a6772c3d173a2fedb1880455456 https://www.encodeproject.org/files/ENCFF000PYN/@@download/ENCFF000PYN.bigBed hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PYO bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 881691239 Richard Myers, HAIB e6dff4b3304ed6e58c2a15e0aea2d4e2 https://www.encodeproject.org/files/ENCFF000PYO/@@download/ENCFF000PYO.bam hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PYQ bigWig raw signal ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 17804709 Richard Myers, HAIB 8bdb31d94926a6f92f11ee0a459e6bf1 https://www.encodeproject.org/files/ENCFF000PYQ/@@download/ENCFF000PYQ.bigWig hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PYS bigWig raw signal ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 43870480 Richard Myers, HAIB ad0902f42a036598d84b378d07e3d6a3 https://www.encodeproject.org/files/ENCFF000PYS/@@download/ENCFF000PYS.bigWig hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PYX fastq reads ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 963094529 Richard Myers, HAIB 30fd1904dccb981641efafdd34c7c8c1 https://www.encodeproject.org/files/ENCFF000PYX/@@download/ENCFF000PYX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PYZ fastq reads ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1127180190 Richard Myers, HAIB 6e7dde2257d59de2d86a46ccf1ba5e6a https://www.encodeproject.org/files/ENCFF000PYZ/@@download/ENCFF000PYZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001UJP bed broadPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 230221 Richard Myers, HAIB 364cfc5d54f7780bb402a120882dfed5 https://www.encodeproject.org/files/ENCFF001UJP/@@download/ENCFF001UJP.bed.gz hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001UJQ bed broadPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 658908 Richard Myers, HAIB 1486ee285d629ced2ce23190677784ae https://www.encodeproject.org/files/ENCFF001UJQ/@@download/ENCFF001UJQ.bed.gz hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF002CLU bed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 495891 ENCODE Consortium Analysis Working Group b27d8f475ea230f1eb132ba49fd7bffe https://www.encodeproject.org/files/ENCFF002CLU/@@download/ENCFF002CLU.bed.gz hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF721DHW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE ENCFF002CLU 1287334 ENCODE Consortium 0f40eac98a204da32f831708f8d39b2b https://www.encodeproject.org/files/ENCFF721DHW/@@download/ENCFF721DHW.bigBed hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF386ZEB bam unfiltered alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYZ, ENCFF807MUK 1278816511 ENCODE Processing Pipeline dedd5ec00d1aa1ec961df649552f8dca https://www.encodeproject.org/files/ENCFF386ZEB/@@download/ENCFF386ZEB.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF032EXY bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYZ, ENCFF807MUK 310972759 ENCODE Processing Pipeline dbd8b6366013c6ed876c980d5246956f https://www.encodeproject.org/files/ENCFF032EXY/@@download/ENCFF032EXY.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF393OPU bam unfiltered alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYX, ENCFF807MUK 1134642468 ENCODE Processing Pipeline a917587d0c7d7e8d26c9312770f4a1f2 https://www.encodeproject.org/files/ENCFF393OPU/@@download/ENCFF393OPU.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF620AHU bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYX, ENCFF807MUK 457949625 ENCODE Processing Pipeline 02a2e2bb109ae341f790834e2edafe23 https://www.encodeproject.org/files/ENCFF620AHU/@@download/ENCFF620AHU.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF551QGI bam unfiltered alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYZ, ENCFF643CGH 1282956672 ENCODE Processing Pipeline 2c797dcb531cfdeb7d141b32efdec19e https://www.encodeproject.org/files/ENCFF551QGI/@@download/ENCFF551QGI.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF665PGG bam unfiltered alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYX, ENCFF643CGH 1136235528 ENCODE Processing Pipeline 05eb120fad757f96bfaaef56a7a251b0 https://www.encodeproject.org/files/ENCFF665PGG/@@download/ENCFF665PGG.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF823GCX bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYZ, ENCFF643CGH 310697982 ENCODE Processing Pipeline 4f92bcecf3b99eb51ab9adf3ce3e3c1a https://www.encodeproject.org/files/ENCFF823GCX/@@download/ENCFF823GCX.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF827SLL bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYX, ENCFF643CGH 457476245 ENCODE Processing Pipeline 2e9b3adafcbbb1f6494e6a76dfd99dfc https://www.encodeproject.org/files/ENCFF827SLL/@@download/ENCFF827SLL.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF631VAT bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234NVU, ENCFF823GCX, ENCFF827SLL, ENCFF913HVS 367095664 ENCODE Processing Pipeline dedf2788ca990f96b98127eca54f3043 https://www.encodeproject.org/files/ENCFF631VAT/@@download/ENCFF631VAT.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF600KSR bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF827SLL 4618643 ENCODE Processing Pipeline f80fb0a330e853076d1ecde97c30d612 https://www.encodeproject.org/files/ENCFF600KSR/@@download/ENCFF600KSR.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF367DJC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF160TXQ 633959 ENCODE Processing Pipeline af6b78542dc44983e74f960ff2ff6964 https://www.encodeproject.org/files/ENCFF367DJC/@@download/ENCFF367DJC.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF178MCM bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF823GCX, ENCFF913HVS 144286414 ENCODE Processing Pipeline 2cdd8aeda2dda8e589b246c831cbed6d https://www.encodeproject.org/files/ENCFF178MCM/@@download/ENCFF178MCM.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF387JQM bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF823GCX, ENCFF913HVS 2327422 ENCODE Processing Pipeline 919ab98f1062428b5bacc0e4b1fa2c45 https://www.encodeproject.org/files/ENCFF387JQM/@@download/ENCFF387JQM.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF111LUX bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234NVU, ENCFF823GCX, ENCFF827SLL, ENCFF913HVS 5407264 ENCODE Processing Pipeline 8151ed30cf0e34d025af1edbe8c3f1f9 https://www.encodeproject.org/files/ENCFF111LUX/@@download/ENCFF111LUX.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF390HFN bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF387JQM 4748073 ENCODE Processing Pipeline 80f0a29119bd413114ea5d7bdc20f717 https://www.encodeproject.org/files/ENCFF390HFN/@@download/ENCFF390HFN.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF801QVO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF533GSH 1115030 ENCODE Processing Pipeline e0cc80ceedc2a75ac71a6d6bfdd2b578 https://www.encodeproject.org/files/ENCFF801QVO/@@download/ENCFF801QVO.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF801JVB bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF823GCX, ENCFF913HVS 306250193 ENCODE Processing Pipeline c287fa83d37a5d47a8746e44ea86b6aa https://www.encodeproject.org/files/ENCFF801JVB/@@download/ENCFF801JVB.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF028RYK bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF827SLL 308236039 ENCODE Processing Pipeline 9b9fe2654a338ee643cd506f7c496dbc https://www.encodeproject.org/files/ENCFF028RYK/@@download/ENCFF028RYK.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF933BWN bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234NVU, ENCFF823GCX, ENCFF827SLL, ENCFF913HVS 578060235 ENCODE Processing Pipeline 1848013f123443a0ce5ad6962200eff1 https://www.encodeproject.org/files/ENCFF933BWN/@@download/ENCFF933BWN.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF779QGH bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF827SLL 182569393 ENCODE Processing Pipeline ed9a7217c94fc78f0c5f1bcb7d83a083 https://www.encodeproject.org/files/ENCFF779QGH/@@download/ENCFF779QGH.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF097LYC bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF600KSR 10188455 ENCODE Processing Pipeline 8a76730e139f9a7fc13b2609c0c1fb97 https://www.encodeproject.org/files/ENCFF097LYC/@@download/ENCFF097LYC.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF653OIU bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF111LUX 13201275 ENCODE Processing Pipeline 100b546549290ea7fbc9cca374cef2b5 https://www.encodeproject.org/files/ENCFF653OIU/@@download/ENCFF653OIU.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF160TXQ bed narrowPeak conservative idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF111LUX, ENCFF387JQM, ENCFF419RSJ, ENCFF600KSR 336013 ENCODE Processing Pipeline 4b878558672672e2613aaced03c649fe https://www.encodeproject.org/files/ENCFF160TXQ/@@download/ENCFF160TXQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF533GSH bed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF111LUX, ENCFF387JQM, ENCFF419RSJ, ENCFF600KSR 533841 ENCODE Processing Pipeline 7d606acf8a9036afa2f4744e0e01b98b https://www.encodeproject.org/files/ENCFF533GSH/@@download/ENCFF533GSH.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF223CAR fastq reads ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF680WFP 1529542794 Richard Myers, HAIB 90f227d956f680d644d695f34796be1e SRA:SRR6213116 https://www.encodeproject.org/files/ENCFF223CAR/@@download/ENCFF223CAR.fastq.gz HiSeq 2000 /files/ENCFF383VKC/ released antibody characterized with exemption ENCFF680WFP fastq reads ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF223CAR 1559487604 Richard Myers, HAIB 18900fa1e5c35ded15ad9f9692672cf4 SRA:SRR6213116 https://www.encodeproject.org/files/ENCFF680WFP/@@download/ENCFF680WFP.fastq.gz HiSeq 2000 /files/ENCFF793LZO/ released antibody characterized with exemption ENCFF855ASQ bam unfiltered alignments ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF223CAR, ENCFF680WFP, ENCFF807MUK 3790435478 ENCODE Processing Pipeline f14c47a391934d053661bffb6d8f2454 https://www.encodeproject.org/files/ENCFF855ASQ/@@download/ENCFF855ASQ.bam hg19 released antibody characterized with exemption ENCFF665OQP bam unfiltered alignments ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF223CAR, ENCFF643CGH, ENCFF680WFP 3808173179 ENCODE Processing Pipeline 0f668172f3a7b8cb573d3c46f476a291 https://www.encodeproject.org/files/ENCFF665OQP/@@download/ENCFF665OQP.bam GRCh38 released antibody characterized with exemption ENCFF123JQA bam alignments ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF223CAR, ENCFF643CGH, ENCFF680WFP 2883229961 ENCODE Processing Pipeline e5e1501bbee8e5e4b69ef1e2711ff6a9 https://www.encodeproject.org/files/ENCFF123JQA/@@download/ENCFF123JQA.bam GRCh38 released antibody characterized with exemption ENCFF251UXN bam alignments ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF223CAR, ENCFF680WFP, ENCFF807MUK 2880522831 ENCODE Processing Pipeline 98b3adb1d45a297dde40fc24b19137f0 https://www.encodeproject.org/files/ENCFF251UXN/@@download/ENCFF251UXN.bam hg19 released antibody characterized with exemption ENCFF972ODR bed narrowPeak peaks ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF123JQA 5805024 ENCODE Processing Pipeline 625c0244cef6c25bef9d5ba07bd28106 https://www.encodeproject.org/files/ENCFF972ODR/@@download/ENCFF972ODR.bed.gz GRCh38 released antibody characterized with exemption ENCFF392YZJ bigWig signal p-value ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF123JQA 1683240064 ENCODE Processing Pipeline a3078d1faa6a867b5501bc888ecfc7d5 https://www.encodeproject.org/files/ENCFF392YZJ/@@download/ENCFF392YZJ.bigWig GRCh38 released antibody characterized with exemption ENCFF091KSY bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF972ODR 77892 ENCODE Processing Pipeline c4f75eb2668361e573930499973d00b5 https://www.encodeproject.org/files/ENCFF091KSY/@@download/ENCFF091KSY.bed.gz GRCh38 released antibody characterized with exemption ENCFF439OWG bigWig fold change over control ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF123JQA 1534924992 ENCODE Processing Pipeline 4517141f5873dd6e5fe5de6785d4bfdf https://www.encodeproject.org/files/ENCFF439OWG/@@download/ENCFF439OWG.bigWig GRCh38 released antibody characterized with exemption ENCFF116DMQ bigBed narrowPeak peaks ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF972ODR 11798193 ENCODE Processing Pipeline 812215adf2bb9e7009b41b3bf515af24 https://www.encodeproject.org/files/ENCFF116DMQ/@@download/ENCFF116DMQ.bigBed GRCh38 released antibody characterized with exemption ENCFF295HWU bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF091KSY 190212 ENCODE Processing Pipeline ccc896888cbe8da2c9cf36b46492071e https://www.encodeproject.org/files/ENCFF295HWU/@@download/ENCFF295HWU.bigBed GRCh38 released antibody characterized with exemption ENCFF277OHA bigWig signal p-value ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF251UXN 1777573669 ENCODE Processing Pipeline 2831040662e190382992a6949d8488b6 https://www.encodeproject.org/files/ENCFF277OHA/@@download/ENCFF277OHA.bigWig hg19 released antibody characterized with exemption ENCFF092XDN bigWig fold change over control ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF251UXN 1458642605 ENCODE Processing Pipeline 153552355db324fd42d45832e9be54af https://www.encodeproject.org/files/ENCFF092XDN/@@download/ENCFF092XDN.bigWig hg19 released antibody characterized with exemption ENCFF885NNA bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF038BWR 74598 ENCODE Processing Pipeline 79259b88bda6ba06d62d37ec88eb97fd https://www.encodeproject.org/files/ENCFF885NNA/@@download/ENCFF885NNA.bed.gz hg19 released antibody characterized with exemption ENCFF547NSK bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF885NNA 184025 ENCODE Processing Pipeline ccab994ac35b83bfa0938e3f51d56130 https://www.encodeproject.org/files/ENCFF547NSK/@@download/ENCFF547NSK.bigBed hg19 released antibody characterized with exemption ENCFF038BWR bed narrowPeak peaks ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF251UXN 5797053 ENCODE Processing Pipeline 81dc193717ccd7b6e24037e8cf3defc4 https://www.encodeproject.org/files/ENCFF038BWR/@@download/ENCFF038BWR.bed.gz hg19 released antibody characterized with exemption ENCFF760HWM bigBed narrowPeak peaks ENCSR313BMV ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF038BWR 11774566 ENCODE Processing Pipeline 6726c4834d4e9a66cdb62f7c158e31a9 https://www.encodeproject.org/files/ENCFF760HWM/@@download/ENCFF760HWM.bigBed hg19 released antibody characterized with exemption ENCFF818QPF fastq reads ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF278HOZ 1380999018 Richard Myers, HAIB fb63f3e6430a6bb69680e41de9ff043d SRA:SRR6213270 https://www.encodeproject.org/files/ENCFF818QPF/@@download/ENCFF818QPF.fastq.gz HiSeq 2000 /files/ENCFF887QUQ/ released antibody characterized with exemption ENCFF278HOZ fastq reads ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF818QPF 1354943268 Richard Myers, HAIB c6751ecc57f0a31aabfb8ef40c4ee695 SRA:SRR6213270 https://www.encodeproject.org/files/ENCFF278HOZ/@@download/ENCFF278HOZ.fastq.gz HiSeq 2000 /files/ENCFF720TXT/ released antibody characterized with exemption ENCFF376LHS bam unfiltered alignments ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF278HOZ, ENCFF807MUK, ENCFF818QPF 3274988247 ENCODE Processing Pipeline 2e86e91f0f6423ff2b888020ea9c2508 https://www.encodeproject.org/files/ENCFF376LHS/@@download/ENCFF376LHS.bam hg19 released antibody characterized with exemption ENCFF108NWA bam alignments ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF278HOZ, ENCFF807MUK, ENCFF818QPF 2485298893 ENCODE Processing Pipeline 9712d8972e3b5c7acdd668b04c927ff1 https://www.encodeproject.org/files/ENCFF108NWA/@@download/ENCFF108NWA.bam hg19 released antibody characterized with exemption ENCFF605PCA bam unfiltered alignments ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF278HOZ, ENCFF643CGH, ENCFF818QPF 3288370849 ENCODE Processing Pipeline 61fb874b98dbdc6e239eeb3a2a60c852 https://www.encodeproject.org/files/ENCFF605PCA/@@download/ENCFF605PCA.bam GRCh38 released antibody characterized with exemption ENCFF874WSE bam alignments ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF278HOZ, ENCFF643CGH, ENCFF818QPF 2487006065 ENCODE Processing Pipeline 34f6e24c00d39662ff53481a873a2a0c https://www.encodeproject.org/files/ENCFF874WSE/@@download/ENCFF874WSE.bam GRCh38 released antibody characterized with exemption ENCFF780PVG bigWig fold change over control ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF874WSE 852005985 ENCODE Processing Pipeline 6ef95ae4c2fd2b6ccdc9088e3c09ee40 https://www.encodeproject.org/files/ENCFF780PVG/@@download/ENCFF780PVG.bigWig GRCh38 released antibody characterized with exemption ENCFF348MWL bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF524EST 62187 ENCODE Processing Pipeline f55cf9f6548c0465beda58439c908af0 https://www.encodeproject.org/files/ENCFF348MWL/@@download/ENCFF348MWL.bed.gz GRCh38 released antibody characterized with exemption ENCFF542NYO bigWig signal p-value ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF874WSE 837045986 ENCODE Processing Pipeline 89e5720ba8a52cc2fa3ed3ae731b8f02 https://www.encodeproject.org/files/ENCFF542NYO/@@download/ENCFF542NYO.bigWig GRCh38 released antibody characterized with exemption ENCFF222TNQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF348MWL 163226 ENCODE Processing Pipeline a4831d037eb3f6cda488d8475510d3ec https://www.encodeproject.org/files/ENCFF222TNQ/@@download/ENCFF222TNQ.bigBed GRCh38 released antibody characterized with exemption ENCFF524EST bed narrowPeak peaks ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF874WSE 4670468 ENCODE Processing Pipeline 6f867eebe1a891e0f8fa5c7a007b1fae https://www.encodeproject.org/files/ENCFF524EST/@@download/ENCFF524EST.bed.gz GRCh38 released antibody characterized with exemption ENCFF549MFC bigBed narrowPeak peaks ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF524EST 11724066 ENCODE Processing Pipeline c9f8a84e22bf88c70543801247e00dec https://www.encodeproject.org/files/ENCFF549MFC/@@download/ENCFF549MFC.bigBed GRCh38 released antibody characterized with exemption ENCFF195OMO bigWig signal p-value ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF108NWA 859956654 ENCODE Processing Pipeline 4406be2a5a3379293da768177f3901be https://www.encodeproject.org/files/ENCFF195OMO/@@download/ENCFF195OMO.bigWig hg19 released antibody characterized with exemption ENCFF450JUD bigWig fold change over control ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF108NWA 852776271 ENCODE Processing Pipeline 0912fb8a4fb0323f4ad8c769cf3c5c13 https://www.encodeproject.org/files/ENCFF450JUD/@@download/ENCFF450JUD.bigWig hg19 released antibody characterized with exemption ENCFF860SHD bed narrowPeak peaks ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF108NWA 4668753 ENCODE Processing Pipeline dbb1280f1b1472f7675aa6b8c62d2b1f https://www.encodeproject.org/files/ENCFF860SHD/@@download/ENCFF860SHD.bed.gz hg19 released antibody characterized with exemption ENCFF996CCJ bigBed narrowPeak peaks ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF860SHD 11700251 ENCODE Processing Pipeline 3e1d5d057e3f7c62ca1dd16c62fd2615 https://www.encodeproject.org/files/ENCFF996CCJ/@@download/ENCFF996CCJ.bigBed hg19 released antibody characterized with exemption ENCFF700HZX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF860SHD 63741 ENCODE Processing Pipeline f8d9017d9c917f21efca673f339bed7b https://www.encodeproject.org/files/ENCFF700HZX/@@download/ENCFF700HZX.bed.gz hg19 released antibody characterized with exemption ENCFF160ZTR bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR635XLM ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF700HZX 164050 ENCODE Processing Pipeline 103cec7dff0d9d1a8bf8054203cdeaaa https://www.encodeproject.org/files/ENCFF160ZTR/@@download/ENCFF160ZTR.bigBed hg19 released antibody characterized with exemption ENCFF705WBN fastq reads ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 1 50 single-ended 1537247195 Richard Myers, HAIB 68062d104616f659a491ee30b1a372fa SRA:SRR5339281 https://www.encodeproject.org/files/ENCFF705WBN/@@download/ENCFF705WBN.fastq.gz HiSeq 2000 /files/ENCFF400XMH/ released moderate library complexity severe bottlenecking ENCFF049PKJ fastq reads ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 1 50 single-ended 1264689902 Richard Myers, HAIB ffd2de0b7ae4669dc517cda106247489 SRA:SRR5339280 https://www.encodeproject.org/files/ENCFF049PKJ/@@download/ENCFF049PKJ.fastq.gz HiSeq 2000 /files/ENCFF774EJH/ released moderate library complexity severe bottlenecking ENCFF475TEH bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 50 ENCFF643CGH, ENCFF705WBN 1602610537 ENCODE Processing Pipeline 069cf388eb1708a94d81941d80ce11ef https://www.encodeproject.org/files/ENCFF475TEH/@@download/ENCFF475TEH.bam GRCh38 released moderate library complexity severe bottlenecking ENCFF797FVU bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 50 ENCFF643CGH, ENCFF705WBN 1172487039 ENCODE Processing Pipeline dcf2b8253ee40bc7c9ae000632dae3b8 https://www.encodeproject.org/files/ENCFF797FVU/@@download/ENCFF797FVU.bam GRCh38 released moderate library complexity severe bottlenecking ENCFF977KTE bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF797FVU 1012904130 ENCODE Processing Pipeline e4fee537b444c62b49c85a9fa270d572 https://www.encodeproject.org/files/ENCFF977KTE/@@download/ENCFF977KTE.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF482NEN bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ 960389990 ENCODE Processing Pipeline bfabdbceb75cb9c89d06505d45196256 https://www.encodeproject.org/files/ENCFF482NEN/@@download/ENCFF482NEN.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF047ZUW bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ, ENCFF797FVU 1197709859 ENCODE Processing Pipeline b0815e19ceeb802de6aba4fab7c3c473 https://www.encodeproject.org/files/ENCFF047ZUW/@@download/ENCFF047ZUW.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF306KZM bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF797FVU 778353855 ENCODE Processing Pipeline 5c807e97c47f3ee2d84b756e10ff8fd9 https://www.encodeproject.org/files/ENCFF306KZM/@@download/ENCFF306KZM.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF902DYB bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ 789460599 ENCODE Processing Pipeline 8ef4f6419b51d17fb4ee43353a806617 https://www.encodeproject.org/files/ENCFF902DYB/@@download/ENCFF902DYB.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF677HOP bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ, ENCFF797FVU 1143595392 ENCODE Processing Pipeline 8bf3b2261cf991309e1dfb64638c70cd https://www.encodeproject.org/files/ENCFF677HOP/@@download/ENCFF677HOP.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF034XAT bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF797FVU 6735210 ENCODE Processing Pipeline e6fb8b79b33ac42e1687fc8c2a64c085 https://www.encodeproject.org/files/ENCFF034XAT/@@download/ENCFF034XAT.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF009DGB bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF034XAT 13035124 ENCODE Processing Pipeline 46ff283683c31908f7fbbf80b6830a66 https://www.encodeproject.org/files/ENCFF009DGB/@@download/ENCFF009DGB.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF896YKO bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 50 ENCFF705WBN, ENCFF807MUK 1598810750 ENCODE Processing Pipeline 42d843a008b55234795bfb71fba5fdc5 https://www.encodeproject.org/files/ENCFF896YKO/@@download/ENCFF896YKO.bam hg19 released moderate library complexity severe bottlenecking ENCFF099QLM bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF807MUK 1586810927 ENCODE Processing Pipeline e9e8c621e893360cfcf2d88d51bbbd67 https://www.encodeproject.org/files/ENCFF099QLM/@@download/ENCFF099QLM.bam hg19 released moderate library complexity severe bottlenecking ENCFF392GEM bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF807MUK 1077868323 ENCODE Processing Pipeline 774cad206354fe047d5176c0b0ccec8e https://www.encodeproject.org/files/ENCFF392GEM/@@download/ENCFF392GEM.bam hg19 released moderate library complexity severe bottlenecking ENCFF986BOM bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 50 ENCFF705WBN, ENCFF807MUK 1173275706 ENCODE Processing Pipeline aa0684256da83e7371db3ac8fd227822 https://www.encodeproject.org/files/ENCFF986BOM/@@download/ENCFF986BOM.bam hg19 released moderate library complexity severe bottlenecking ENCFF678AVD bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ 6599752 ENCODE Processing Pipeline 43f8386b9e079217d0528038eb0f08c5 https://www.encodeproject.org/files/ENCFF678AVD/@@download/ENCFF678AVD.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF079HTI bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ, ENCFF797FVU 7021816 ENCODE Processing Pipeline 05284c0723c4ea830f572b6823a293ca https://www.encodeproject.org/files/ENCFF079HTI/@@download/ENCFF079HTI.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF390ZUZ bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF678AVD 13242361 ENCODE Processing Pipeline e2d721cf70c6c0883853779073e36db9 https://www.encodeproject.org/files/ENCFF390ZUZ/@@download/ENCFF390ZUZ.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF107LLK bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF079HTI 13185690 ENCODE Processing Pipeline fda5860b1b6d0b4612ef83f30af17f99 https://www.encodeproject.org/files/ENCFF107LLK/@@download/ENCFF107LLK.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF912CZG bed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF034XAT, ENCFF079HTI, ENCFF419RSJ, ENCFF678AVD 425372 ENCODE Processing Pipeline 066774c1505a15379be88e6cea295b07 https://www.encodeproject.org/files/ENCFF912CZG/@@download/ENCFF912CZG.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF545JRL bigBed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF912CZG 851113 ENCODE Processing Pipeline 9166f2eb3354ef626f500ead81fb9aac https://www.encodeproject.org/files/ENCFF545JRL/@@download/ENCFF545JRL.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF718DFX bed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF034XAT, ENCFF079HTI, ENCFF419RSJ, ENCFF678AVD 513563 ENCODE Processing Pipeline bd4007ae01d0f255d400fec344b2c2e9 https://www.encodeproject.org/files/ENCFF718DFX/@@download/ENCFF718DFX.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF317JJX bigBed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF718DFX 981711 ENCODE Processing Pipeline f84257215634dae3572010f240ab6df2 https://www.encodeproject.org/files/ENCFF317JJX/@@download/ENCFF317JJX.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF202BLM bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF643CGH 1077476746 ENCODE Processing Pipeline af75b092ea482b47232baa520cdee9fd https://www.encodeproject.org/files/ENCFF202BLM/@@download/ENCFF202BLM.bam GRCh38 released moderate library complexity severe bottlenecking ENCFF417ZUD bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF807MUK 1410409245 ENCODE Processing Pipeline 4844aa82717cbfa527ffe7fe2107d4ee https://www.encodeproject.org/files/ENCFF417ZUD/@@download/ENCFF417ZUD.bam hg19 released moderate library complexity severe bottlenecking ENCFF671VUD bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF643CGH 1415826214 ENCODE Processing Pipeline 6d6511257a005a4d3999eb35421aba65 https://www.encodeproject.org/files/ENCFF671VUD/@@download/ENCFF671VUD.bam GRCh38 released moderate library complexity severe bottlenecking ENCFF225PIB bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF807MUK 1077868308 ENCODE Processing Pipeline bb6fd225d050e728ea04ed2e28372a81 https://www.encodeproject.org/files/ENCFF225PIB/@@download/ENCFF225PIB.bam hg19 released moderate library complexity severe bottlenecking ENCFF037FVZ bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 7031469 ENCODE Processing Pipeline feb220c189b97d59af29b24ea583b4fe https://www.encodeproject.org/files/ENCFF037FVZ/@@download/ENCFF037FVZ.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF635OWB bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD 921703384 ENCODE Processing Pipeline db35f3286effc145de2a9830a1508e5d https://www.encodeproject.org/files/ENCFF635OWB/@@download/ENCFF635OWB.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF528UCI bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 1060346693 ENCODE Processing Pipeline 2ae1a36e677882813fdb25a3bd3d4264 https://www.encodeproject.org/files/ENCFF528UCI/@@download/ENCFF528UCI.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF160OZE bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD 787139477 ENCODE Processing Pipeline 910ee2aa263fff8cc0a82aa814124af1 https://www.encodeproject.org/files/ENCFF160OZE/@@download/ENCFF160OZE.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF614EKZ bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 1191277090 ENCODE Processing Pipeline 898c57514a1dec8c7277198164bc3ea3 https://www.encodeproject.org/files/ENCFF614EKZ/@@download/ENCFF614EKZ.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF052IOC bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 6746160 ENCODE Processing Pipeline bd04ead3bc991eac41605e6d188659e2 https://www.encodeproject.org/files/ENCFF052IOC/@@download/ENCFF052IOC.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF514IDT bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD 6597708 ENCODE Processing Pipeline a21edc00eb3fd7ccf328b299898d43ae https://www.encodeproject.org/files/ENCFF514IDT/@@download/ENCFF514IDT.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF491WIY bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF052IOC 13030598 ENCODE Processing Pipeline 3fe7b722fb92a848f925e5f6c73bce8a https://www.encodeproject.org/files/ENCFF491WIY/@@download/ENCFF491WIY.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF892CNV bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF514IDT 13233949 ENCODE Processing Pipeline f8865a9261a95b5c177ae316360eafcc https://www.encodeproject.org/files/ENCFF892CNV/@@download/ENCFF892CNV.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF998JIP bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF037FVZ 13193515 ENCODE Processing Pipeline a396a2ddc1951db633f78202e7c8de39 https://www.encodeproject.org/files/ENCFF998JIP/@@download/ENCFF998JIP.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF829KBM bed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF037FVZ, ENCFF052IOC, ENCFF514IDT 425262 ENCODE Processing Pipeline 37a322022254c65d6e7c7f996f3dd4ff https://www.encodeproject.org/files/ENCFF829KBM/@@download/ENCFF829KBM.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF732WDZ bigBed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF829KBM 851861 ENCODE Processing Pipeline fd59215cfa450efa251402fa4915bf83 https://www.encodeproject.org/files/ENCFF732WDZ/@@download/ENCFF732WDZ.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF569SHP bigBed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF558DSF 972908 ENCODE Processing Pipeline 3d83f5971cb4d32c0e236a9a5b72166e https://www.encodeproject.org/files/ENCFF569SHP/@@download/ENCFF569SHP.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF558DSF bed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF037FVZ, ENCFF052IOC, ENCFF514IDT 507490 ENCODE Processing Pipeline 082127ee84bc475cf8b8969343b39cd0 https://www.encodeproject.org/files/ENCFF558DSF/@@download/ENCFF558DSF.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF624PFM fastq reads ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 1 ENCFF592ZFR 1815815620 Richard Myers, HAIB a34c22f3c645adfd5b676dadb38520ed SRA:SRR6212656 https://www.encodeproject.org/files/ENCFF624PFM/@@download/ENCFF624PFM.fastq.gz HiSeq 2000 /files/ENCFF424UYB/ released antibody characterized with exemption ENCFF592ZFR fastq reads ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 2 ENCFF624PFM 1893644876 Richard Myers, HAIB 36318412de56e9f44cf8efb5d1bd893d SRA:SRR6212656 https://www.encodeproject.org/files/ENCFF592ZFR/@@download/ENCFF592ZFR.fastq.gz HiSeq 2000 /files/ENCFF550VPF/ released antibody characterized with exemption ENCFF850LVP bam unfiltered alignments ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF592ZFR, ENCFF624PFM, ENCFF807MUK 4226042732 ENCODE Processing Pipeline 31d32370130b6cd3d422a6b1f394d6c6 https://www.encodeproject.org/files/ENCFF850LVP/@@download/ENCFF850LVP.bam hg19 released antibody characterized with exemption ENCFF580KMP bam alignments ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF592ZFR, ENCFF624PFM, ENCFF643CGH 2869951323 ENCODE Processing Pipeline 0818a4819f1d119f542d3ec44da123c6 https://www.encodeproject.org/files/ENCFF580KMP/@@download/ENCFF580KMP.bam GRCh38 released antibody characterized with exemption ENCFF168QCE bam unfiltered alignments ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF592ZFR, ENCFF624PFM, ENCFF643CGH 4234508163 ENCODE Processing Pipeline ef7c19c76d33d953c310faa74f255d2b https://www.encodeproject.org/files/ENCFF168QCE/@@download/ENCFF168QCE.bam GRCh38 released antibody characterized with exemption ENCFF987QGM bam alignments ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF592ZFR, ENCFF624PFM, ENCFF807MUK 2870628477 ENCODE Processing Pipeline 8245bb3f0f744738eedaf1211de1e048 https://www.encodeproject.org/files/ENCFF987QGM/@@download/ENCFF987QGM.bam hg19 released antibody characterized with exemption ENCFF225KQB bigWig fold change over control ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF238HZC, ENCFF580KMP 931104281 ENCODE Processing Pipeline e5aa0238991f3a152cf55ebd94912f5c https://www.encodeproject.org/files/ENCFF225KQB/@@download/ENCFF225KQB.bigWig GRCh38 released antibody characterized with exemption ENCFF654KMQ bigWig signal p-value ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF724YUP, ENCFF987QGM 1200159954 ENCODE Processing Pipeline 13b5777f521b45ad2faf6ae4f0d3c020 https://www.encodeproject.org/files/ENCFF654KMQ/@@download/ENCFF654KMQ.bigWig hg19 released antibody characterized with exemption ENCFF459RLW bigBed narrowPeak peaks ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF276DMI 13397130 ENCODE Processing Pipeline a7d474e90197553896df4394fb305d40 https://www.encodeproject.org/files/ENCFF459RLW/@@download/ENCFF459RLW.bigBed hg19 released antibody characterized with exemption ENCFF339JZT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF724RDJ 2321775 ENCODE Processing Pipeline 17e9feb31f03926f67a677a97abaceff https://www.encodeproject.org/files/ENCFF339JZT/@@download/ENCFF339JZT.bigBed hg19 released antibody characterized with exemption ENCFF032NNR bigWig signal p-value ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF238HZC, ENCFF580KMP 1121894451 ENCODE Processing Pipeline 0f4876a1a3efdc9169b5f6820cea747d https://www.encodeproject.org/files/ENCFF032NNR/@@download/ENCFF032NNR.bigWig GRCh38 released antibody characterized with exemption ENCFF280LUO bed narrowPeak peaks ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF238HZC, ENCFF580KMP 6853739 ENCODE Processing Pipeline c6d0bac265f9d2f533200f231f985720 https://www.encodeproject.org/files/ENCFF280LUO/@@download/ENCFF280LUO.bed.gz GRCh38 released antibody characterized with exemption ENCFF755JEJ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF280LUO, ENCFF419RSJ 1233664 ENCODE Processing Pipeline 8e520d5b3f40f65c004dade1e645deda https://www.encodeproject.org/files/ENCFF755JEJ/@@download/ENCFF755JEJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF934GFA bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF755JEJ 2267310 ENCODE Processing Pipeline 9056264be464a475fd58828de9f080cf https://www.encodeproject.org/files/ENCFF934GFA/@@download/ENCFF934GFA.bigBed GRCh38 released antibody characterized with exemption ENCFF142CQJ bigWig fold change over control ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF724YUP, ENCFF987QGM 916173764 ENCODE Processing Pipeline 08e0a29322be523f933064f24c2d6477 https://www.encodeproject.org/files/ENCFF142CQJ/@@download/ENCFF142CQJ.bigWig hg19 released antibody characterized with exemption ENCFF935BOX bigBed narrowPeak peaks ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF280LUO 13302394 ENCODE Processing Pipeline 66b91be441ffc81a3ab5b8321b0d8178 https://www.encodeproject.org/files/ENCFF935BOX/@@download/ENCFF935BOX.bigBed GRCh38 released antibody characterized with exemption ENCFF276DMI bed narrowPeak peaks ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF724YUP, ENCFF987QGM 6934582 ENCODE Processing Pipeline f84191bdeeaecf50608c8cd038ef23d2 https://www.encodeproject.org/files/ENCFF276DMI/@@download/ENCFF276DMI.bed.gz hg19 released antibody characterized with exemption ENCFF724RDJ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR033FDW ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF001TDO, ENCFF276DMI 1266799 ENCODE Processing Pipeline 284474be34c0186f427aeb0b2f56a45c https://www.encodeproject.org/files/ENCFF724RDJ/@@download/ENCFF724RDJ.bed.gz hg19 released antibody characterized with exemption ENCFF000NWF bam alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NWT 824439542 Richard Myers, HAIB 4e904d1bb23042695bdd045f2cbc46f9 https://www.encodeproject.org/files/ENCFF000NWF/@@download/ENCFF000NWF.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NWH bigBed broadPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TXG 551037 Richard Myers, HAIB 8eb85edb685f72464029ec6c9a465f91 https://www.encodeproject.org/files/ENCFF000NWH/@@download/ENCFF000NWH.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NWI bigBed broadPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TXH 628345 Richard Myers, HAIB e1a63318adf5ca156c6f895c161a1d1e https://www.encodeproject.org/files/ENCFF000NWI/@@download/ENCFF000NWI.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NWJ bigWig raw signal ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 1 16120086 Richard Myers, HAIB 1e5f4068cd8c3603a6f55f64f8296175 https://www.encodeproject.org/files/ENCFF000NWJ/@@download/ENCFF000NWJ.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NWK bam alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NWV 967009304 Richard Myers, HAIB 012abc81238109e9790a9024328d08ff https://www.encodeproject.org/files/ENCFF000NWK/@@download/ENCFF000NWK.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NWL bigWig raw signal ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 1 21467479 Richard Myers, HAIB 7a6588eb647cbcc29ff80c1254b31bad https://www.encodeproject.org/files/ENCFF000NWL/@@download/ENCFF000NWL.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NWT fastq reads ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 870825486 Richard Myers, HAIB e011367659917a655f073ac80ee4f91e https://www.encodeproject.org/files/ENCFF000NWT/@@download/ENCFF000NWT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth biological replicates with identical biosample ENCFF000NWV fastq reads ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1035627302 Richard Myers, HAIB ff1932701763aee22984b5a951febd83 https://www.encodeproject.org/files/ENCFF000NWV/@@download/ENCFF000NWV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, low read depth biological replicates with identical biosample ENCFF001TXG bed broadPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 1 339348 Richard Myers, HAIB 03aceacdeaa397aaf3b9aac9965c4123 https://www.encodeproject.org/files/ENCFF001TXG/@@download/ENCFF001TXG.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TXH bed broadPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 1 401778 Richard Myers, HAIB 0644524f5f3062c61fa14e97648187ad https://www.encodeproject.org/files/ENCFF001TXH/@@download/ENCFF001TXH.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CHB bed narrowPeak optimal idr thresholded peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 358811 ENCODE Consortium Analysis Working Group 9e2708daf73a8a5e361e6ef88e8bb464 https://www.encodeproject.org/files/ENCFF002CHB/@@download/ENCFF002CHB.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF307HMP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE ENCFF002CHB 817179 ENCODE Consortium 2910e316232417ddb43ae7763cbc588c https://www.encodeproject.org/files/ENCFF307HMP/@@download/ENCFF307HMP.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF028SCM bam unfiltered alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NWT, ENCFF643CGH 1113335001 ENCODE Processing Pipeline 5a79c4a2fb825627512cc27291934e6f https://www.encodeproject.org/files/ENCFF028SCM/@@download/ENCFF028SCM.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF240MQI bam alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NWT, ENCFF643CGH 644643687 ENCODE Processing Pipeline 1c20ff0def323dcbaf162273da622bc1 https://www.encodeproject.org/files/ENCFF240MQI/@@download/ENCFF240MQI.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF888PAI bam alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NWV, ENCFF643CGH 766004482 ENCODE Processing Pipeline 9a381fee1a0f451d1c09fcdd2391b548 https://www.encodeproject.org/files/ENCFF888PAI/@@download/ENCFF888PAI.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF358CPI bam unfiltered alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NWV, ENCFF643CGH 1315266088 ENCODE Processing Pipeline daf751177b0c51f3df3ea7d06107d44c https://www.encodeproject.org/files/ENCFF358CPI/@@download/ENCFF358CPI.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF077CHK bam unfiltered alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NWT, ENCFF807MUK 1110036095 ENCODE Processing Pipeline 0ada5903dc30146faccc8a75547cf27e https://www.encodeproject.org/files/ENCFF077CHK/@@download/ENCFF077CHK.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF356JEO bam alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NWT, ENCFF807MUK 640952733 ENCODE Processing Pipeline 8e463d84ea86834b6494196537061722 https://www.encodeproject.org/files/ENCFF356JEO/@@download/ENCFF356JEO.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF056SZK bam unfiltered alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NWV, ENCFF807MUK 1310788835 ENCODE Processing Pipeline d333e04eedf89604e6d052cb94e3b2d5 https://www.encodeproject.org/files/ENCFF056SZK/@@download/ENCFF056SZK.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF732SBB bam alignments ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NWV, ENCFF807MUK 760267172 ENCODE Processing Pipeline 5ee214365c432e750a39372692e2a021 https://www.encodeproject.org/files/ENCFF732SBB/@@download/ENCFF732SBB.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF224TTO bigWig signal p-value ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF240MQI, ENCFF562HPN 511164791 ENCODE Processing Pipeline b8127a2bdd4a925a705c4a4462ee5271 https://www.encodeproject.org/files/ENCFF224TTO/@@download/ENCFF224TTO.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF027BBC bigWig signal p-value ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF888PAI 430013921 ENCODE Processing Pipeline b9fd321d59ee4cc4d88c194b5c898503 https://www.encodeproject.org/files/ENCFF027BBC/@@download/ENCFF027BBC.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF511TJU bigWig fold change over control ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF888PAI 343890248 ENCODE Processing Pipeline f8ee721a448c5652e42d63a3ba2f558b https://www.encodeproject.org/files/ENCFF511TJU/@@download/ENCFF511TJU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF255OTO bigWig signal p-value ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF240MQI, ENCFF438FFV, ENCFF562HPN, ENCFF888PAI 862095165 ENCODE Processing Pipeline 69b29b498ce89f9e4e5141ecc3e7a139 https://www.encodeproject.org/files/ENCFF255OTO/@@download/ENCFF255OTO.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF073JYX bigWig fold change over control ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF240MQI, ENCFF562HPN 309702919 ENCODE Processing Pipeline 13bca6f390a90f2e92bcea16d90120de https://www.encodeproject.org/files/ENCFF073JYX/@@download/ENCFF073JYX.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF185INW bigWig fold change over control ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF240MQI, ENCFF438FFV, ENCFF562HPN, ENCFF888PAI 741051636 ENCODE Processing Pipeline 7cd7a49509bf7e13c84545f6ce5dac1f https://www.encodeproject.org/files/ENCFF185INW/@@download/ENCFF185INW.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF944GNM bed narrowPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF240MQI, ENCFF562HPN 5067106 ENCODE Processing Pipeline 5468ae53970173483242c32e37204766 https://www.encodeproject.org/files/ENCFF944GNM/@@download/ENCFF944GNM.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF089TUG bed narrowPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF888PAI 4929526 ENCODE Processing Pipeline d927d47628609ca867531933148023ed https://www.encodeproject.org/files/ENCFF089TUG/@@download/ENCFF089TUG.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF119FVK bigBed narrowPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF944GNM 10870010 ENCODE Processing Pipeline 90ed2f5892e3789e80bfcb62f1d3a68f https://www.encodeproject.org/files/ENCFF119FVK/@@download/ENCFF119FVK.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF826OPY bed narrowPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF240MQI, ENCFF438FFV, ENCFF562HPN, ENCFF888PAI 6014158 ENCODE Processing Pipeline 5ac5fbf1d8a09abf546a16f47263182d https://www.encodeproject.org/files/ENCFF826OPY/@@download/ENCFF826OPY.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF588FKS bigBed narrowPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF089TUG 10699875 ENCODE Processing Pipeline 8f65eb9e0cf67b32551efd5342c75be2 https://www.encodeproject.org/files/ENCFF588FKS/@@download/ENCFF588FKS.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF134TRQ bigBed narrowPeak peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF826OPY 13201388 ENCODE Processing Pipeline 042f69e631882344922c67f7ac84969e https://www.encodeproject.org/files/ENCFF134TRQ/@@download/ENCFF134TRQ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF393ZEE bed narrowPeak conservative idr thresholded peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089TUG, ENCFF419RSJ, ENCFF826OPY, ENCFF944GNM 318424 ENCODE Processing Pipeline 12b4d328c97c1fb18048d745b51bc8bc https://www.encodeproject.org/files/ENCFF393ZEE/@@download/ENCFF393ZEE.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF049SZR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF720YMW 669895 ENCODE Processing Pipeline 6effdadce16dcad00018448622e26c9d https://www.encodeproject.org/files/ENCFF049SZR/@@download/ENCFF049SZR.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF865RMQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393ZEE 603919 ENCODE Processing Pipeline e5af43cd2fd3b2cdb796cabf28467328 https://www.encodeproject.org/files/ENCFF865RMQ/@@download/ENCFF865RMQ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF720YMW bed narrowPeak optimal idr thresholded peaks ENCSR000BGY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens IRF4-human ENCAB000AHZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089TUG, ENCFF419RSJ, ENCFF826OPY, ENCFF944GNM 366567 ENCODE Processing Pipeline ace1fb5b44c14612084d7bf52d7561bd https://www.encodeproject.org/files/ENCFF720YMW/@@download/ENCFF720YMW.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF000PGS bam alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PHG 1262274855 Richard Myers, HAIB 424e96c2b06b0b714b0c1fc4fe84ccf7 https://www.encodeproject.org/files/ENCFF000PGS/@@download/ENCFF000PGS.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PGT bam alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PHE 1291566387 Richard Myers, HAIB 651af0c6dbd9a79884777d78b870ca88 https://www.encodeproject.org/files/ENCFF000PGT/@@download/ENCFF000PGT.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PGU bigBed broadPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFO 1603006 Richard Myers, HAIB 71235abdb940262b79c67b4850d49961 https://www.encodeproject.org/files/ENCFF000PGU/@@download/ENCFF000PGU.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PGV bigBed broadPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFP 953834 Richard Myers, HAIB 256c8c7b04961611322115180339a07d https://www.encodeproject.org/files/ENCFF000PGV/@@download/ENCFF000PGV.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PGW bigWig raw signal ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 1 66888577 Richard Myers, HAIB dfc7811af0b42ece5df7126b026d5d4a https://www.encodeproject.org/files/ENCFF000PGW/@@download/ENCFF000PGW.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PGY bigWig raw signal ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 1 36090199 Richard Myers, HAIB 3e28bfa0fd04ef9e403a79307144fe47 https://www.encodeproject.org/files/ENCFF000PGY/@@download/ENCFF000PGY.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PHE fastq reads ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1230672401 Richard Myers, HAIB 4a9d64fd12204aa5efdee26a29670688 https://www.encodeproject.org/files/ENCFF000PHE/@@download/ENCFF000PHE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PHG fastq reads ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1331120379 Richard Myers, HAIB 504dbcb3bfcb216dca7b7fbc79e9295f https://www.encodeproject.org/files/ENCFF000PHG/@@download/ENCFF000PHG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF001UFO bed broadPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 1 1010225 Richard Myers, HAIB b47ce98eda1cac3d9f3b835db067c111 https://www.encodeproject.org/files/ENCFF001UFO/@@download/ENCFF001UFO.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UFP bed broadPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 1 570465 Richard Myers, HAIB 8d0adcbc204a2fc95640f1428372e544 https://www.encodeproject.org/files/ENCFF001UFP/@@download/ENCFF001UFP.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CKF bed narrowPeak optimal idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1191204 ENCODE Consortium Analysis Working Group 1377acce5b4f8944e3f6ca12debd45d0 https://www.encodeproject.org/files/ENCFF002CKF/@@download/ENCFF002CKF.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF813SUF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE ENCFF002CKF 2541591 ENCODE Consortium 4a1a45c9fc15627512fd75641b9dc701 https://www.encodeproject.org/files/ENCFF813SUF/@@download/ENCFF813SUF.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF341QCS bam unfiltered alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHE, ENCFF643CGH 1580825989 ENCODE Processing Pipeline bce708d38aa8f696a0162312b19d60ba https://www.encodeproject.org/files/ENCFF341QCS/@@download/ENCFF341QCS.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF435DKZ bam alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHE, ENCFF643CGH 863391414 ENCODE Processing Pipeline 875084a679cccdd4339b63abb6d987d6 https://www.encodeproject.org/files/ENCFF435DKZ/@@download/ENCFF435DKZ.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF481WJC bam unfiltered alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PHG, ENCFF643CGH 1577177442 ENCODE Processing Pipeline b6ddb79e65824e75c7c685ff6b609ab8 https://www.encodeproject.org/files/ENCFF481WJC/@@download/ENCFF481WJC.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF178SXE bam alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PHG, ENCFF643CGH 743760816 ENCODE Processing Pipeline 01f88275cbb3e9149201364b46c6b75d https://www.encodeproject.org/files/ENCFF178SXE/@@download/ENCFF178SXE.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF622NLS bam unfiltered alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PHG, ENCFF807MUK 1573801782 ENCODE Processing Pipeline 142023aac218d62306806d0a9d5cab12 https://www.encodeproject.org/files/ENCFF622NLS/@@download/ENCFF622NLS.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF249IWE bam alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PHG, ENCFF807MUK 744111148 ENCODE Processing Pipeline d7a12d8bb12ba0c4eece1572ce99a14c https://www.encodeproject.org/files/ENCFF249IWE/@@download/ENCFF249IWE.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF491CGX bam unfiltered alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHE, ENCFF807MUK 1572927711 ENCODE Processing Pipeline 2bca295d47bf939f007f561dd17f3557 https://www.encodeproject.org/files/ENCFF491CGX/@@download/ENCFF491CGX.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF466SFU bam alignments ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHE, ENCFF807MUK 863691631 ENCODE Processing Pipeline 00d1e925c921582ff0aac755a088a122 https://www.encodeproject.org/files/ENCFF466SFU/@@download/ENCFF466SFU.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF446XDZ bigWig signal p-value ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178SXE 477781255 ENCODE Processing Pipeline e3cdc3a5741bc365aca064def696fbfa https://www.encodeproject.org/files/ENCFF446XDZ/@@download/ENCFF446XDZ.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF497MQF bigWig fold change over control ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178SXE 334571752 ENCODE Processing Pipeline bc68f7588381f0167ed631200f79d3bb https://www.encodeproject.org/files/ENCFF497MQF/@@download/ENCFF497MQF.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF671PSW bigWig signal p-value ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF435DKZ 468578616 ENCODE Processing Pipeline 00f794e76cf50a6823ae3d94b0ee2e30 https://www.encodeproject.org/files/ENCFF671PSW/@@download/ENCFF671PSW.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF905EUN bigWig signal p-value ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178SXE, ENCFF435DKZ 589455414 ENCODE Processing Pipeline 5027f008fb04fb74e0fb3daaeb1a1b81 https://www.encodeproject.org/files/ENCFF905EUN/@@download/ENCFF905EUN.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF957STN bigWig fold change over control ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF435DKZ 425846904 ENCODE Processing Pipeline bd0b0ff44361bb6d160187bd8151859e https://www.encodeproject.org/files/ENCFF957STN/@@download/ENCFF957STN.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF601JOJ bigWig fold change over control ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178SXE, ENCFF435DKZ 653052833 ENCODE Processing Pipeline 7eb43bbbcaa8aeb11c31b87a0598a34d https://www.encodeproject.org/files/ENCFF601JOJ/@@download/ENCFF601JOJ.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF018FYT bed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF435DKZ 4517378 ENCODE Processing Pipeline bca791059416d8a8742a0358aee86cc8 https://www.encodeproject.org/files/ENCFF018FYT/@@download/ENCFF018FYT.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF168MWY bed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178SXE, ENCFF435DKZ 5012326 ENCODE Processing Pipeline b9fae953cce2f57c52d080dca2467f72 https://www.encodeproject.org/files/ENCFF168MWY/@@download/ENCFF168MWY.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF467MCE bed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178SXE 4557476 ENCODE Processing Pipeline b123cdf1d19324a9f82c8575df55f7e3 https://www.encodeproject.org/files/ENCFF467MCE/@@download/ENCFF467MCE.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF992KKV bigBed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF467MCE 10932969 ENCODE Processing Pipeline 0a9939c711fa3d608e53fdc7b1b3de67 https://www.encodeproject.org/files/ENCFF992KKV/@@download/ENCFF992KKV.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF592HQK bigBed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF168MWY 11608360 ENCODE Processing Pipeline 500afbc2b53787b31c20d58244e5e7fc https://www.encodeproject.org/files/ENCFF592HQK/@@download/ENCFF592HQK.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF954QKM bigBed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF018FYT 10968438 ENCODE Processing Pipeline f69b011036b4d54a5160c174938286e4 https://www.encodeproject.org/files/ENCFF954QKM/@@download/ENCFF954QKM.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF252PLM bed narrowPeak conservative idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF018FYT, ENCFF168MWY, ENCFF419RSJ, ENCFF467MCE 818480 ENCODE Processing Pipeline 85b63599d806a528d71b921c134cc20c https://www.encodeproject.org/files/ENCFF252PLM/@@download/ENCFF252PLM.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF543WTP bed narrowPeak optimal idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF018FYT, ENCFF168MWY, ENCFF419RSJ, ENCFF467MCE 945660 ENCODE Processing Pipeline 9ea142ef1f326a6f169650abf716af98 https://www.encodeproject.org/files/ENCFF543WTP/@@download/ENCFF543WTP.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF493ZQB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF252PLM 1488308 ENCODE Processing Pipeline 38cb078f5af5c43b3cce26868b158e57 https://www.encodeproject.org/files/ENCFF493ZQB/@@download/ENCFF493ZQB.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF008COY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF543WTP 1659828 ENCODE Processing Pipeline 455bdc7f9e864cc07ba471f400a1a4c1 https://www.encodeproject.org/files/ENCFF008COY/@@download/ENCFF008COY.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF693EOH bigWig signal p-value ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249IWE, ENCFF346RZT 510484673 ENCODE Processing Pipeline 411581c86c566db9677d3ed0e6c684d2 https://www.encodeproject.org/files/ENCFF693EOH/@@download/ENCFF693EOH.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF583JMZ bigWig signal p-value ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346RZT, ENCFF466SFU 565310933 ENCODE Processing Pipeline a472297f8ba03142a2b83d9b1e8b35f1 https://www.encodeproject.org/files/ENCFF583JMZ/@@download/ENCFF583JMZ.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF804LNZ bigWig fold change over control ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249IWE, ENCFF346RZT, ENCFF466SFU 655488472 ENCODE Processing Pipeline e72db7d1e524708211fb9d77cb4e9635 https://www.encodeproject.org/files/ENCFF804LNZ/@@download/ENCFF804LNZ.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF091UHT bigBed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF327TVJ 10974837 ENCODE Processing Pipeline 286af5b4542667e1107b540e02cda4a7 https://www.encodeproject.org/files/ENCFF091UHT/@@download/ENCFF091UHT.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF210CPJ bigWig signal p-value ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249IWE, ENCFF346RZT, ENCFF466SFU 589546806 ENCODE Processing Pipeline 59b6ed2e55792ae6591d026ccff1a49e https://www.encodeproject.org/files/ENCFF210CPJ/@@download/ENCFF210CPJ.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF487OYC bed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249IWE, ENCFF346RZT 4558024 ENCODE Processing Pipeline e6182e7855053208ac2899d09d72a51b https://www.encodeproject.org/files/ENCFF487OYC/@@download/ENCFF487OYC.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF327TVJ bed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346RZT, ENCFF466SFU 4525639 ENCODE Processing Pipeline 74e9a09fbfe54eeeb20ac00a4e971cb3 https://www.encodeproject.org/files/ENCFF327TVJ/@@download/ENCFF327TVJ.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF429DPZ bigBed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF487OYC 10928668 ENCODE Processing Pipeline 009ce71716e83b11bcf4b1a9b04aa253 https://www.encodeproject.org/files/ENCFF429DPZ/@@download/ENCFF429DPZ.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF651AZJ bigWig fold change over control ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249IWE, ENCFF346RZT 337863261 ENCODE Processing Pipeline cc2477c04e2cf36e6ecf6a909443c66a https://www.encodeproject.org/files/ENCFF651AZJ/@@download/ENCFF651AZJ.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF342TKO bigWig fold change over control ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346RZT, ENCFF466SFU 424527940 ENCODE Processing Pipeline b6d136d1d941f84d4074f9bc5ea0917f https://www.encodeproject.org/files/ENCFF342TKO/@@download/ENCFF342TKO.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF297IFU bed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249IWE, ENCFF346RZT, ENCFF466SFU 5015521 ENCODE Processing Pipeline 3ef5b0174a679daf3f7761d08e724175 https://www.encodeproject.org/files/ENCFF297IFU/@@download/ENCFF297IFU.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF808VWK bigBed narrowPeak peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF297IFU 11604376 ENCODE Processing Pipeline 9d9113ae15b5bcb8faca93a07b6eabd0 https://www.encodeproject.org/files/ENCFF808VWK/@@download/ENCFF808VWK.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF329MOF bed narrowPeak conservative idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF297IFU, ENCFF327TVJ, ENCFF487OYC 816078 ENCODE Processing Pipeline 55e49c887d7a85977cc20da2f00b2607 https://www.encodeproject.org/files/ENCFF329MOF/@@download/ENCFF329MOF.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF720IND bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF329MOF 1484255 ENCODE Processing Pipeline 26c6eb1b272a372bf435a0f934728d5d https://www.encodeproject.org/files/ENCFF720IND/@@download/ENCFF720IND.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF237OKO bed narrowPeak optimal idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF297IFU, ENCFF327TVJ, ENCFF487OYC 948053 ENCODE Processing Pipeline 13e337503a6a9deb5c4953281268d9fa https://www.encodeproject.org/files/ENCFF237OKO/@@download/ENCFF237OKO.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF915BIE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF237OKO 1663186 ENCODE Processing Pipeline ef384a4aa234cd9cf96c4900311e8c61 https://www.encodeproject.org/files/ENCFF915BIE/@@download/ENCFF915BIE.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ONZ bam alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OOH 850879774 Richard Myers, HAIB c1ac9a6c1704b0cb36e171b40c7ed686 https://www.encodeproject.org/files/ENCFF000ONZ/@@download/ENCFF000ONZ.bam hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000OOA bam alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OOO 822752988 Richard Myers, HAIB da00be6a3ac3f4a46c55eb59f43ab1db https://www.encodeproject.org/files/ENCFF000OOA/@@download/ENCFF000OOA.bam hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000OOB bigBed broadPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBE 137141 Richard Myers, HAIB baac0fc0ab2248ff6535c783854e69ea https://www.encodeproject.org/files/ENCFF000OOB/@@download/ENCFF000OOB.bigBed hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000OOC bigBed broadPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBF 247747 Richard Myers, HAIB 88be0ce9a746685f2f2bc8f142bb866c https://www.encodeproject.org/files/ENCFF000OOC/@@download/ENCFF000OOC.bigBed hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000OOE bigWig raw signal ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 3668292 Richard Myers, HAIB 9faeef9ddc51d89834867c4c0d89c9b8 https://www.encodeproject.org/files/ENCFF000OOE/@@download/ENCFF000OOE.bigWig hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OOG bigWig raw signal ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 6845744 Richard Myers, HAIB 4162e33a11ba4d50ae4b33e95e3d15e0 https://www.encodeproject.org/files/ENCFF000OOG/@@download/ENCFF000OOG.bigWig hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OOH fastq reads ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 716007363 Richard Myers, HAIB 847e1dbb9998526e3c5d2f2e3fd85e88 https://www.encodeproject.org/files/ENCFF000OOH/@@download/ENCFF000OOH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000OOO fastq reads ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 671606980 Richard Myers, HAIB 41bf0fa63a7048de35a6375d067453cf https://www.encodeproject.org/files/ENCFF000OOO/@@download/ENCFF000OOO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF001UBE bed broadPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 45349 Richard Myers, HAIB edd096386f94c52c37336292ef0e8d5e https://www.encodeproject.org/files/ENCFF001UBE/@@download/ENCFF001UBE.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UBF bed broadPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 137154 Richard Myers, HAIB 63116adcf781c0621122d467745d951e https://www.encodeproject.org/files/ENCFF001UBF/@@download/ENCFF001UBF.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CIV bed narrowPeak optimal idr thresholded peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 199154 ENCODE Consortium Analysis Working Group 0f9d09e6548dc05ba820e0b32d65e5bd https://www.encodeproject.org/files/ENCFF002CIV/@@download/ENCFF002CIV.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF041FRT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE ENCFF002CIV 490420 ENCODE Consortium 32613177ee143315cbea42db5377ffc7 https://www.encodeproject.org/files/ENCFF041FRT/@@download/ENCFF041FRT.bigBed hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF777MZR bam alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOO, ENCFF643CGH 633218294 ENCODE Processing Pipeline 291ea6b55ad7d5d6679417ebdb8a3899 https://www.encodeproject.org/files/ENCFF777MZR/@@download/ENCFF777MZR.bam GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF387QYI bam unfiltered alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOO, ENCFF643CGH 975544865 ENCODE Processing Pipeline 569a23db939abb6c714bf59cc46c0591 https://www.encodeproject.org/files/ENCFF387QYI/@@download/ENCFF387QYI.bam GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF054DVF bam alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OOH, ENCFF643CGH 675399316 ENCODE Processing Pipeline ad92fb6bcc297d0384e6bc9a726ad1fa https://www.encodeproject.org/files/ENCFF054DVF/@@download/ENCFF054DVF.bam GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF326PXU bam unfiltered alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OOH, ENCFF643CGH 1040776479 ENCODE Processing Pipeline 53a534150d69daa8a7251d30167b8baf https://www.encodeproject.org/files/ENCFF326PXU/@@download/ENCFF326PXU.bam GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF310UUE bam unfiltered alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OOH, ENCFF807MUK 1036953955 ENCODE Processing Pipeline a0fa347b84cc524b9149fbd3a5ea0c5b https://www.encodeproject.org/files/ENCFF310UUE/@@download/ENCFF310UUE.bam hg19 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF900GIN bam unfiltered alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOO, ENCFF807MUK 970817662 ENCODE Processing Pipeline d44597c844e0457d31e96e7ca6d1bbae https://www.encodeproject.org/files/ENCFF900GIN/@@download/ENCFF900GIN.bam hg19 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF343RXC bam alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOO, ENCFF807MUK 633583844 ENCODE Processing Pipeline 73a52bdcd92699ba4118a5e17dc7a82d https://www.encodeproject.org/files/ENCFF343RXC/@@download/ENCFF343RXC.bam hg19 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF998VOK bam alignments ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OOH, ENCFF807MUK 675646426 ENCODE Processing Pipeline f78b99c58fba62452c8188d470674c32 https://www.encodeproject.org/files/ENCFF998VOK/@@download/ENCFF998VOK.bam hg19 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF036DCA bigWig signal p-value ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF777MZR, ENCFF948LKH 518359618 ENCODE Processing Pipeline a8feecefe4fc430e6b60867eed4bede8 https://www.encodeproject.org/files/ENCFF036DCA/@@download/ENCFF036DCA.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF961IXB bigWig signal p-value ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF054DVF, ENCFF948LKH 559365264 ENCODE Processing Pipeline 1ed03892cf0189343f2dd2585f8802f4 https://www.encodeproject.org/files/ENCFF961IXB/@@download/ENCFF961IXB.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF621LNV bigWig fold change over control ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF777MZR, ENCFF948LKH 372803893 ENCODE Processing Pipeline f2b428eddae6a6115cac757a2eecd28f https://www.encodeproject.org/files/ENCFF621LNV/@@download/ENCFF621LNV.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF464FML bigWig fold change over control ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF054DVF, ENCFF948LKH 393523175 ENCODE Processing Pipeline 037afe403d939c73ca546186f7521b1f https://www.encodeproject.org/files/ENCFF464FML/@@download/ENCFF464FML.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF559URO bigWig signal p-value ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF054DVF, ENCFF777MZR, ENCFF948LKH 550958397 ENCODE Processing Pipeline e33cf67ada0d43e4a749f8f502a641d4 https://www.encodeproject.org/files/ENCFF559URO/@@download/ENCFF559URO.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF341OGJ bigWig fold change over control ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF054DVF, ENCFF777MZR, ENCFF948LKH 675521302 ENCODE Processing Pipeline 5788eee8195f8e6be69812fa4e4cf766 https://www.encodeproject.org/files/ENCFF341OGJ/@@download/ENCFF341OGJ.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF045DFZ bed narrowPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF777MZR, ENCFF948LKH 4410502 ENCODE Processing Pipeline 8ba8b157f76f8815d7b58c13707f7a10 https://www.encodeproject.org/files/ENCFF045DFZ/@@download/ENCFF045DFZ.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF607AWB bigBed narrowPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF229UAJ 10714082 ENCODE Processing Pipeline b8c001201af4e60e8ff81bce8a55883a https://www.encodeproject.org/files/ENCFF607AWB/@@download/ENCFF607AWB.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF229UAJ bed narrowPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF054DVF, ENCFF948LKH 4053676 ENCODE Processing Pipeline 5ef90a1530e93ca17c324c62979d7cfd https://www.encodeproject.org/files/ENCFF229UAJ/@@download/ENCFF229UAJ.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF986ASC bigBed narrowPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF678RLO 11221293 ENCODE Processing Pipeline 00b504121a93e79ae9ab8cae7704f5cc https://www.encodeproject.org/files/ENCFF986ASC/@@download/ENCFF986ASC.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF042WRS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF004MNA 298223 ENCODE Processing Pipeline 4d1f012483e96f6793c7149f2c0bb7f7 https://www.encodeproject.org/files/ENCFF042WRS/@@download/ENCFF042WRS.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF678RLO bed narrowPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF054DVF, ENCFF777MZR, ENCFF948LKH 4884681 ENCODE Processing Pipeline 3301882b37b432f5af5c4e437c07c7c2 https://www.encodeproject.org/files/ENCFF678RLO/@@download/ENCFF678RLO.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF663ZNI bigBed narrowPeak peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF045DFZ 10754105 ENCODE Processing Pipeline 7f3885f18f183d1d86fe58cf28f08806 https://www.encodeproject.org/files/ENCFF663ZNI/@@download/ENCFF663ZNI.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF004MNA bed narrowPeak conservative idr thresholded peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF045DFZ, ENCFF229UAJ, ENCFF419RSJ, ENCFF678RLO 161584 ENCODE Processing Pipeline 4e185ab5defde4572463e89b979baeac https://www.encodeproject.org/files/ENCFF004MNA/@@download/ENCFF004MNA.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF477ANT bed narrowPeak optimal idr thresholded peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF045DFZ, ENCFF229UAJ, ENCFF419RSJ, ENCFF678RLO 205541 ENCODE Processing Pipeline 29679d804ec39d878f61ec037a69b2b7 https://www.encodeproject.org/files/ENCFF477ANT/@@download/ENCFF477ANT.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF469MQG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJA ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF477ANT 430064 ENCODE Processing Pipeline f5c1bb63fe54d89ad070b5a3afd6e9c6 https://www.encodeproject.org/files/ENCFF469MQG/@@download/ENCFF469MQG.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000QIF bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QIS 1547529622 Richard Myers, HAIB 578a7c37f568b487c9a945eb57beaf27 https://www.encodeproject.org/files/ENCFF000QIF/@@download/ENCFF000QIF.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIG bigBed broadPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001ULR 670584 Richard Myers, HAIB 0d6607d4e4957dfe4c8d0cfd04223af2 https://www.encodeproject.org/files/ENCFF000QIG/@@download/ENCFF000QIG.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIH bigBed broadPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001ULT 1266312 Richard Myers, HAIB 57ee534deeec248617c83375ed075b2a https://www.encodeproject.org/files/ENCFF000QIH/@@download/ENCFF000QIH.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIJ bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QIW 1899072688 Richard Myers, HAIB 26d4a74d3bf5c8fbece32811bbdf16be https://www.encodeproject.org/files/ENCFF000QIJ/@@download/ENCFF000QIJ.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIK bigWig raw signal ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 1 35704916 Richard Myers, HAIB 502c2a3ee3cd02bfa9a39bc4add058e0 https://www.encodeproject.org/files/ENCFF000QIK/@@download/ENCFF000QIK.bigWig hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF000QIL bigWig raw signal ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 1 53989655 Richard Myers, HAIB 50d273c523bff1fe65cb675b757fe426 https://www.encodeproject.org/files/ENCFF000QIL/@@download/ENCFF000QIL.bigWig hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF000QIS fastq reads ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1517577972 Richard Myers, HAIB 5e1a8fd6006d430d0d04d2678dc4b311 https://www.encodeproject.org/files/ENCFF000QIS/@@download/ENCFF000QIS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIW fastq reads ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1916430655 Richard Myers, HAIB aea18ce14472eebcc9d525e2f86a9aa2 https://www.encodeproject.org/files/ENCFF000QIW/@@download/ENCFF000QIW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF001ULR bed broadPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 1 433550 Richard Myers, HAIB 7ab62d6adc72f387a4659bd33c6c6bef https://www.encodeproject.org/files/ENCFF001ULR/@@download/ENCFF001ULR.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF001ULT bed broadPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 1 765383 Richard Myers, HAIB 0dcd4573da528a6e7a40ccea2eecb7a6 https://www.encodeproject.org/files/ENCFF001ULT/@@download/ENCFF001ULT.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF002CMT bed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 623516 ENCODE Consortium Analysis Working Group 90e37355f317426523602e11b566c865 https://www.encodeproject.org/files/ENCFF002CMT/@@download/ENCFF002CMT.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF619KVA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE ENCFF002CMT 1252703 ENCODE Consortium 3a72697c1469b0e6fc44119722beea92 https://www.encodeproject.org/files/ENCFF619KVA/@@download/ENCFF619KVA.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF683WRR bam unfiltered alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIS, ENCFF643CGH 1682641840 ENCODE Processing Pipeline 4e2dcf27975e5ebda4d4e3de3e9b77ce https://www.encodeproject.org/files/ENCFF683WRR/@@download/ENCFF683WRR.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF790FNF bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIS, ENCFF643CGH 1122993833 ENCODE Processing Pipeline 880064634930df4e6e5799ee789c241a https://www.encodeproject.org/files/ENCFF790FNF/@@download/ENCFF790FNF.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF324YZW bam unfiltered alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QIW, ENCFF643CGH 2077785756 ENCODE Processing Pipeline 61008059b220d2264b99e07b0307adf9 https://www.encodeproject.org/files/ENCFF324YZW/@@download/ENCFF324YZW.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF516UTV bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QIW, ENCFF643CGH 1332696728 ENCODE Processing Pipeline 0e31d980062fc4145af69385d6201308 https://www.encodeproject.org/files/ENCFF516UTV/@@download/ENCFF516UTV.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF386SKS bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIS, ENCFF807MUK 1123456658 ENCODE Processing Pipeline db09a915c690d33899f975c7d3c60aab https://www.encodeproject.org/files/ENCFF386SKS/@@download/ENCFF386SKS.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF102ECA bam unfiltered alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIS, ENCFF807MUK 1679321416 ENCODE Processing Pipeline 5eeb2f4e1339b18cbbfff4c785479ff7 https://www.encodeproject.org/files/ENCFF102ECA/@@download/ENCFF102ECA.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF616BNF bam unfiltered alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QIW, ENCFF807MUK 2074168325 ENCODE Processing Pipeline 69fa2d86fef4b23e4b3aa89ad43ad422 https://www.encodeproject.org/files/ENCFF616BNF/@@download/ENCFF616BNF.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF455XOX bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QIW, ENCFF807MUK 1333424025 ENCODE Processing Pipeline a61a4c12a0e3bcfc903b45f45a6875fe https://www.encodeproject.org/files/ENCFF455XOX/@@download/ENCFF455XOX.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF847WJF bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF790FNF, ENCFF836OEO 788196150 ENCODE Processing Pipeline 281463f090899befbba894808a2c9e4f https://www.encodeproject.org/files/ENCFF847WJF/@@download/ENCFF847WJF.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF999MGO bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF516UTV, ENCFF836OEO 680521169 ENCODE Processing Pipeline ca15c3ac06e2c061f8874ea2342b9611 https://www.encodeproject.org/files/ENCFF999MGO/@@download/ENCFF999MGO.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF853NIP bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF516UTV, ENCFF790FNF, ENCFF836OEO 826426884 ENCODE Processing Pipeline 164c60dc6a328a42464cb068c346e3be https://www.encodeproject.org/files/ENCFF853NIP/@@download/ENCFF853NIP.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF940JMG bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF790FNF, ENCFF836OEO 629172388 ENCODE Processing Pipeline 4d7b2dcf94670c74ee82f38f652398b1 https://www.encodeproject.org/files/ENCFF940JMG/@@download/ENCFF940JMG.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF724ZJT bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF516UTV, ENCFF836OEO 666200794 ENCODE Processing Pipeline 8156d06a1d1e44905a48108bba32f353 https://www.encodeproject.org/files/ENCFF724ZJT/@@download/ENCFF724ZJT.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF950JFN bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF516UTV, ENCFF790FNF, ENCFF836OEO 1011329238 ENCODE Processing Pipeline 89256eda19052136568710800bce6303 https://www.encodeproject.org/files/ENCFF950JFN/@@download/ENCFF950JFN.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF299QNM bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF516UTV, ENCFF790FNF, ENCFF836OEO 7037740 ENCODE Processing Pipeline 6f9388b8a1e1bd07f65361eafd5fb445 https://www.encodeproject.org/files/ENCFF299QNM/@@download/ENCFF299QNM.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF841NBP bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF790FNF, ENCFF836OEO 6212835 ENCODE Processing Pipeline ee29b0cffb6c589e4e173445c51c4f4a https://www.encodeproject.org/files/ENCFF841NBP/@@download/ENCFF841NBP.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF364WTP bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF299QNM 13142728 ENCODE Processing Pipeline b782e5b0bfd0f6415b8a74bae26dc042 https://www.encodeproject.org/files/ENCFF364WTP/@@download/ENCFF364WTP.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF736BJY bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF516UTV, ENCFF836OEO 6566541 ENCODE Processing Pipeline 0253413adfbb4baa40646189ecfd0382 https://www.encodeproject.org/files/ENCFF736BJY/@@download/ENCFF736BJY.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF878SHR bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF841NBP 13173228 ENCODE Processing Pipeline 4efd1fdc6e48b90c5b745f11416320c9 https://www.encodeproject.org/files/ENCFF878SHR/@@download/ENCFF878SHR.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF562CUC bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF736BJY 12895312 ENCODE Processing Pipeline 8edd7baf199cd81624fbaf6859c81f7a https://www.encodeproject.org/files/ENCFF562CUC/@@download/ENCFF562CUC.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF779ZST bed narrowPeak conservative idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF299QNM, ENCFF419RSJ, ENCFF736BJY, ENCFF841NBP 540415 ENCODE Processing Pipeline 136ebaa4e07d4e452ff77f4d52816a85 https://www.encodeproject.org/files/ENCFF779ZST/@@download/ENCFF779ZST.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF162KZS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF779ZST 1139415 ENCODE Processing Pipeline 5e65504a2f7228ebec1ed55ea8585d42 https://www.encodeproject.org/files/ENCFF162KZS/@@download/ENCFF162KZS.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF547MLB bed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF299QNM, ENCFF419RSJ, ENCFF736BJY, ENCFF841NBP 632110 ENCODE Processing Pipeline 2b0ac9b8c1ad843bb00b47401296ab78 https://www.encodeproject.org/files/ENCFF547MLB/@@download/ENCFF547MLB.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF272TIX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF547MLB 1281040 ENCODE Processing Pipeline f8218c2d58a059dba4cbda6ad74fb4a8 https://www.encodeproject.org/files/ENCFF272TIX/@@download/ENCFF272TIX.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF814ZXA fastq reads ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 2 ENCFF150ATP 1986262190 Richard Myers, HAIB c96d58c4b079be67b19d9abec9c09fe4 SRA:SRR6213965 https://www.encodeproject.org/files/ENCFF814ZXA/@@download/ENCFF814ZXA.fastq.gz HiSeq 2000 /files/ENCFF500RYP/ released antibody characterized with exemption ENCFF150ATP fastq reads ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 1 ENCFF814ZXA 1941104419 Richard Myers, HAIB e169742c9505528a67996c665864391f SRA:SRR6213965 https://www.encodeproject.org/files/ENCFF150ATP/@@download/ENCFF150ATP.fastq.gz HiSeq 2000 /files/ENCFF688VIR/ released antibody characterized with exemption ENCFF259CDS bam alignments ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF150ATP, ENCFF643CGH, ENCFF814ZXA 3315513718 ENCODE Processing Pipeline 66c21029697e50c711fa15893791cf87 https://www.encodeproject.org/files/ENCFF259CDS/@@download/ENCFF259CDS.bam GRCh38 released antibody characterized with exemption ENCFF308UPV bam unfiltered alignments ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF150ATP, ENCFF643CGH, ENCFF814ZXA 4484238386 ENCODE Processing Pipeline 51c3c8997a2ee9a1dd2cb4063fba2546 https://www.encodeproject.org/files/ENCFF308UPV/@@download/ENCFF308UPV.bam GRCh38 released antibody characterized with exemption ENCFF574YYV bam unfiltered alignments ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF150ATP, ENCFF807MUK, ENCFF814ZXA 4474781598 ENCODE Processing Pipeline 139308a93356b2c8e33dd41d2a2a1ee8 https://www.encodeproject.org/files/ENCFF574YYV/@@download/ENCFF574YYV.bam hg19 released antibody characterized with exemption ENCFF622CTL bam alignments ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF150ATP, ENCFF807MUK, ENCFF814ZXA 3315231561 ENCODE Processing Pipeline 395850f0fcc656a66d3e4e7a4aa09f27 https://www.encodeproject.org/files/ENCFF622CTL/@@download/ENCFF622CTL.bam hg19 released antibody characterized with exemption ENCFF903RGZ bigWig signal p-value ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF259CDS, ENCFF680OHW 1187057716 ENCODE Processing Pipeline 613f52fa716e9b324a2b3ddaad0083a7 https://www.encodeproject.org/files/ENCFF903RGZ/@@download/ENCFF903RGZ.bigWig GRCh38 released antibody characterized with exemption ENCFF419YGU bigBed narrowPeak peaks ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF579GMB 12912261 ENCODE Processing Pipeline e78c89f870e4ff745d5cfbfcdd3b2874 https://www.encodeproject.org/files/ENCFF419YGU/@@download/ENCFF419YGU.bigBed GRCh38 released antibody characterized with exemption ENCFF594BQL bigWig fold change over control ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF259CDS, ENCFF680OHW 1078115945 ENCODE Processing Pipeline 7967bd19ecff2c4f90239f5c215dc1c7 https://www.encodeproject.org/files/ENCFF594BQL/@@download/ENCFF594BQL.bigWig GRCh38 released antibody characterized with exemption ENCFF941HRX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF899FTS 1697803 ENCODE Processing Pipeline 2442cf347945eb02bf5a234d374a7195 https://www.encodeproject.org/files/ENCFF941HRX/@@download/ENCFF941HRX.bigBed GRCh38 released antibody characterized with exemption ENCFF899FTS bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF419RSJ, ENCFF579GMB 933789 ENCODE Processing Pipeline 245f1ec3d72d93c55f02b34efc47a568 https://www.encodeproject.org/files/ENCFF899FTS/@@download/ENCFF899FTS.bed.gz GRCh38 released antibody characterized with exemption ENCFF579GMB bed narrowPeak peaks ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF259CDS, ENCFF680OHW 6999104 ENCODE Processing Pipeline 3c260aa9ac4dfe86d9477675e72f2944 https://www.encodeproject.org/files/ENCFF579GMB/@@download/ENCFF579GMB.bed.gz GRCh38 released antibody characterized with exemption ENCFF032RNH bigBed narrowPeak peaks ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF875DLM 12825605 ENCODE Processing Pipeline 3b6ea9655a8b07def3e3c0346453ee1c https://www.encodeproject.org/files/ENCFF032RNH/@@download/ENCFF032RNH.bigBed hg19 released antibody characterized with exemption ENCFF546RER bigWig fold change over control ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF444SZG, ENCFF622CTL 1087590740 ENCODE Processing Pipeline 6e47da4c050cc97f2121426afef68c6a https://www.encodeproject.org/files/ENCFF546RER/@@download/ENCFF546RER.bigWig hg19 released antibody characterized with exemption ENCFF875DLM bed narrowPeak peaks ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF444SZG, ENCFF622CTL 6930376 ENCODE Processing Pipeline 4d4177385f67999c819446a179bae721 https://www.encodeproject.org/files/ENCFF875DLM/@@download/ENCFF875DLM.bed.gz hg19 released antibody characterized with exemption ENCFF166XQW bigWig signal p-value ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF444SZG, ENCFF622CTL 1207280326 ENCODE Processing Pipeline 18f0432aacfe7a3313daf234f8498dfa https://www.encodeproject.org/files/ENCFF166XQW/@@download/ENCFF166XQW.bigWig hg19 released antibody characterized with exemption ENCFF807YPG bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF001TDO, ENCFF875DLM 922059 ENCODE Processing Pipeline a4fa07dd43acab053b82b6452f094ef7 https://www.encodeproject.org/files/ENCFF807YPG/@@download/ENCFF807YPG.bed.gz hg19 released antibody characterized with exemption ENCFF317ROD bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR714EQS ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF807YPG 1672605 ENCODE Processing Pipeline 91b0b1643291e75122235a45e50d458d https://www.encodeproject.org/files/ENCFF317ROD/@@download/ENCFF317ROD.bigBed hg19 released antibody characterized with exemption ENCFF000NYL bigBed broadPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TXU 164964 Richard Myers, HAIB ff41c1f3027d01111105849243523904 https://www.encodeproject.org/files/ENCFF000NYL/@@download/ENCFF000NYL.bigBed hg19 archived control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000NYM bigBed broadPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TXV 175528 Richard Myers, HAIB defaa54ae5bcc6d85119525e17d1c9eb https://www.encodeproject.org/files/ENCFF000NYM/@@download/ENCFF000NYM.bigBed hg19 archived control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000NYO bam alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NYY 1411780147 Richard Myers, HAIB c7dfa02ba121c3f878edefa8386bc53d https://www.encodeproject.org/files/ENCFF000NYO/@@download/ENCFF000NYO.bam hg19 archived control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000NYP bam alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NZA 2162215343 Richard Myers, HAIB 50c197eb4b88c636ea5166e0c205140d https://www.encodeproject.org/files/ENCFF000NYP/@@download/ENCFF000NYP.bam hg19 archived control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000NYQ bigWig raw signal ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 22370233 Richard Myers, HAIB dbd7d8666cd0fcfeb7022890a573eea1 https://www.encodeproject.org/files/ENCFF000NYQ/@@download/ENCFF000NYQ.bigWig hg19 archived control low read depth, mixed read lengths, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000NYR bigWig raw signal ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 19002486 Richard Myers, HAIB 0a6f9319e71de87aa2d283a78f01610b https://www.encodeproject.org/files/ENCFF000NYR/@@download/ENCFF000NYR.bigWig hg19 archived control low read depth, mixed read lengths, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000NYY fastq reads ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1317809671 Richard Myers, HAIB 5e518f0c12b14e002454400f630d7767 https://www.encodeproject.org/files/ENCFF000NYY/@@download/ENCFF000NYY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODJ/ released inconsistent control read length, control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000NZA fastq reads ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 32 single-ended 2062006233 Richard Myers, HAIB 3a840846a41a3aac8f84c130460222bb https://www.encodeproject.org/files/ENCFF000NZA/@@download/ENCFF000NZA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODG/ released inconsistent control read length, control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001TXU bed broadPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 88357 Richard Myers, HAIB 9e99d7487a607fc8583e4c8fb20cf7f4 https://www.encodeproject.org/files/ENCFF001TXU/@@download/ENCFF001TXU.bed.gz hg19 archived control low read depth, mixed read lengths, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001TXV bed broadPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 84744 Richard Myers, HAIB aaae43fdd8d0700b27b96f903bf2e297 https://www.encodeproject.org/files/ENCFF001TXV/@@download/ENCFF001TXV.bed.gz hg19 archived control low read depth, mixed read lengths, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF386AHN bam alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000NYY, ENCFF807MUK 340390215 ENCODE Processing Pipeline bc0ecd7ea08abaa5640f1e0b1c142ce3 https://www.encodeproject.org/files/ENCFF386AHN/@@download/ENCFF386AHN.bam hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF400ZBQ bam unfiltered alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000NYY, ENCFF807MUK 1238840093 ENCODE Processing Pipeline 4d884c450ea2fde3e9be1a74b92345ad https://www.encodeproject.org/files/ENCFF400ZBQ/@@download/ENCFF400ZBQ.bam hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF941DAK bam unfiltered alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000NYY, ENCFF643CGH 1241277873 ENCODE Processing Pipeline 4130f8899fc638c62b75a8d3d4fcfb57 https://www.encodeproject.org/files/ENCFF941DAK/@@download/ENCFF941DAK.bam GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF455QSR bam alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000NYY, ENCFF643CGH 343341036 ENCODE Processing Pipeline 28fb42f6ab0368bc0e092fb54751b457 https://www.encodeproject.org/files/ENCFF455QSR/@@download/ENCFF455QSR.bam GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF876KTI bam alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000NZA, ENCFF643CGH 471465252 ENCODE Processing Pipeline 6e2a04a4263b59459407a309082cf709 https://www.encodeproject.org/files/ENCFF876KTI/@@download/ENCFF876KTI.bam GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF540RBQ bam unfiltered alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000NZA, ENCFF643CGH 1989235633 ENCODE Processing Pipeline 665a453fe922404539c28c44deb2d302 https://www.encodeproject.org/files/ENCFF540RBQ/@@download/ENCFF540RBQ.bam GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF480ZVD bam unfiltered alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000NZA, ENCFF807MUK 1985651197 ENCODE Processing Pipeline 284614cfcb60d6850470cd5e196d2ea0 https://www.encodeproject.org/files/ENCFF480ZVD/@@download/ENCFF480ZVD.bam hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF259SJI bam alignments ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000NZA, ENCFF807MUK 468458084 ENCODE Processing Pipeline 1c2a8be0cbaf0f980b167a119bc13f2b https://www.encodeproject.org/files/ENCFF259SJI/@@download/ENCFF259SJI.bam hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF898SKK bigWig signal p-value ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF289ONG, ENCFF455QSR, ENCFF862QZT 540437663 ENCODE Processing Pipeline a5c16e039790bb1fe4432cb56ddb9f01 https://www.encodeproject.org/files/ENCFF898SKK/@@download/ENCFF898SKK.bigWig GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF425AIF bigWig signal p-value ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF862QZT, ENCFF876KTI 585597953 ENCODE Processing Pipeline 2d3bb71b5c07b37010c5dfb721f460a9 https://www.encodeproject.org/files/ENCFF425AIF/@@download/ENCFF425AIF.bigWig GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF826FEA bigWig signal p-value ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF259SJI, ENCFF416BIN, ENCFF818ZLY 550743648 ENCODE Processing Pipeline 494414d11e34b1c0b44b6591db54acf5 https://www.encodeproject.org/files/ENCFF826FEA/@@download/ENCFF826FEA.bigWig hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF126ZEW bigWig signal p-value ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF289ONG, ENCFF455QSR, ENCFF862QZT, ENCFF876KTI 596584394 ENCODE Processing Pipeline 5d20e1f2f25c06c7c2d4c533b9ad3cf0 https://www.encodeproject.org/files/ENCFF126ZEW/@@download/ENCFF126ZEW.bigWig GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF405LKD bigWig signal p-value ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF386AHN, ENCFF416BIN, ENCFF818ZLY 540998135 ENCODE Processing Pipeline a551117f9c76c096698080b112adc161 https://www.encodeproject.org/files/ENCFF405LKD/@@download/ENCFF405LKD.bigWig hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF203FQH bigWig signal p-value ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF259SJI, ENCFF386AHN, ENCFF416BIN, ENCFF818ZLY 667668367 ENCODE Processing Pipeline 2d6f4478f6e8d706ad35c05afc46c2d2 https://www.encodeproject.org/files/ENCFF203FQH/@@download/ENCFF203FQH.bigWig hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF141SOO bigWig fold change over control ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF862QZT, ENCFF876KTI 305201830 ENCODE Processing Pipeline 1885f9a2d34097fc86eb897f1f8ea04e https://www.encodeproject.org/files/ENCFF141SOO/@@download/ENCFF141SOO.bigWig GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF559WHJ bigWig fold change over control ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF289ONG, ENCFF455QSR, ENCFF862QZT 254364590 ENCODE Processing Pipeline 5b41a82bf4fa56620c5b88a47fe48e0e https://www.encodeproject.org/files/ENCFF559WHJ/@@download/ENCFF559WHJ.bigWig GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF853RLK bigWig fold change over control ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF259SJI, ENCFF416BIN, ENCFF818ZLY 311878324 ENCODE Processing Pipeline 8c17fcd020f5f912d41a4a9943036e2a https://www.encodeproject.org/files/ENCFF853RLK/@@download/ENCFF853RLK.bigWig hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF557SNT bigWig fold change over control ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF289ONG, ENCFF455QSR, ENCFF862QZT, ENCFF876KTI 465024555 ENCODE Processing Pipeline ea66a1600e02608c120badceb9ff711a https://www.encodeproject.org/files/ENCFF557SNT/@@download/ENCFF557SNT.bigWig GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF998SQA bigWig fold change over control ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF386AHN, ENCFF416BIN, ENCFF818ZLY 260735781 ENCODE Processing Pipeline 0e4ea09e5469a8ab9ffdd90ba93d6387 https://www.encodeproject.org/files/ENCFF998SQA/@@download/ENCFF998SQA.bigWig hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF430KUN bed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF862QZT, ENCFF876KTI 4668465 ENCODE Processing Pipeline fa96a0a34959fcff7bd272a07b9cd100 https://www.encodeproject.org/files/ENCFF430KUN/@@download/ENCFF430KUN.bed.gz GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF137ABA bed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF289ONG, ENCFF455QSR, ENCFF862QZT, ENCFF876KTI 5289715 ENCODE Processing Pipeline 7e59419095c3195595a811dac9c6a661 https://www.encodeproject.org/files/ENCFF137ABA/@@download/ENCFF137ABA.bed.gz GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF989HAC bigBed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF430KUN 10841292 ENCODE Processing Pipeline 09da4da25df1898eac74e530ceaa339e https://www.encodeproject.org/files/ENCFF989HAC/@@download/ENCFF989HAC.bigBed GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF080WIZ bed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF289ONG, ENCFF455QSR, ENCFF862QZT 3424925 ENCODE Processing Pipeline d3bf696962d290d77c7ef0976a4546d6 https://www.encodeproject.org/files/ENCFF080WIZ/@@download/ENCFF080WIZ.bed.gz GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF833UPI bigWig fold change over control ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF259SJI, ENCFF386AHN, ENCFF416BIN, ENCFF818ZLY 485499071 ENCODE Processing Pipeline 979bc4b6b242545f99022e582a143d6d https://www.encodeproject.org/files/ENCFF833UPI/@@download/ENCFF833UPI.bigWig hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF594LDC bigBed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF137ABA 11278338 ENCODE Processing Pipeline 5af499ab3a93138b3438dca8ca92b22e https://www.encodeproject.org/files/ENCFF594LDC/@@download/ENCFF594LDC.bigBed GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF562ZXJ bed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF259SJI, ENCFF416BIN, ENCFF818ZLY 4668469 ENCODE Processing Pipeline ebde3d9c6eff4885283b7b709f7f18d5 https://www.encodeproject.org/files/ENCFF562ZXJ/@@download/ENCFF562ZXJ.bed.gz hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF618GTZ bigBed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF080WIZ 8290273 ENCODE Processing Pipeline a4ea728950743c3dcc1f304197f95efa https://www.encodeproject.org/files/ENCFF618GTZ/@@download/ENCFF618GTZ.bigBed GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF775RYU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF434NOC 234763 ENCODE Processing Pipeline 48e544db6217d2a0ff6adf58d76e6e03 https://www.encodeproject.org/files/ENCFF775RYU/@@download/ENCFF775RYU.bigBed GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF434NOC bed narrowPeak conservative idr thresholded peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF080WIZ, ENCFF137ABA, ENCFF419RSJ, ENCFF430KUN 97032 ENCODE Processing Pipeline faa8fa34e33c61a72e19b471739270ec https://www.encodeproject.org/files/ENCFF434NOC/@@download/ENCFF434NOC.bed.gz GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF274BBE bed narrowPeak optimal idr thresholded peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF080WIZ, ENCFF137ABA, ENCFF419RSJ, ENCFF430KUN 109254 ENCODE Processing Pipeline fa6628790c3f493dcfca9008a5581857 https://www.encodeproject.org/files/ENCFF274BBE/@@download/ENCFF274BBE.bed.gz GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF022KXM bed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF386AHN, ENCFF416BIN, ENCFF818ZLY 3498445 ENCODE Processing Pipeline 4b1b0e06c290e3bfc70d0f2098bcde1d https://www.encodeproject.org/files/ENCFF022KXM/@@download/ENCFF022KXM.bed.gz hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF454QRR bigBed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF022KXM 8388820 ENCODE Processing Pipeline 13003522923ba442c48eefec72d709df https://www.encodeproject.org/files/ENCFF454QRR/@@download/ENCFF454QRR.bigBed hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF040RJG bigBed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF632AEM 11280436 ENCODE Processing Pipeline b058ea3b311c0d225ca847a0d55c2d50 https://www.encodeproject.org/files/ENCFF040RJG/@@download/ENCFF040RJG.bigBed hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF321MSM bigBed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562ZXJ 10848433 ENCODE Processing Pipeline 867aa3d068b0e1a8a7ec7d0e1d8070be https://www.encodeproject.org/files/ENCFF321MSM/@@download/ENCFF321MSM.bigBed hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF632AEM bed narrowPeak peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF259SJI, ENCFF386AHN, ENCFF416BIN, ENCFF818ZLY 5291423 ENCODE Processing Pipeline ccc5da720b615fdf4f07b4e11fd69c3f https://www.encodeproject.org/files/ENCFF632AEM/@@download/ENCFF632AEM.bed.gz hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF849CSU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF274BBE 250976 ENCODE Processing Pipeline 1093d460a6875bbee104340386bb1643 https://www.encodeproject.org/files/ENCFF849CSU/@@download/ENCFF849CSU.bigBed GRCh38 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF936XYD bed narrowPeak conservative idr thresholded peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF022KXM, ENCFF562ZXJ, ENCFF632AEM 96483 ENCODE Processing Pipeline 90c0de5c0124c532f655193383893f1d https://www.encodeproject.org/files/ENCFF936XYD/@@download/ENCFF936XYD.bed.gz hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF048JKT bed narrowPeak optimal idr thresholded peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF022KXM, ENCFF562ZXJ, ENCFF632AEM 104093 ENCODE Processing Pipeline 821185bde94cd93d206c629d07774040 https://www.encodeproject.org/files/ENCFF048JKT/@@download/ENCFF048JKT.bed.gz hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF420APQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF936XYD 234058 ENCODE Processing Pipeline 3ddc06ba27ea3175d7bb6c3cea9cd1ec https://www.encodeproject.org/files/ENCFF420APQ/@@download/ENCFF420APQ.bigBed hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF629KKG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF048JKT 244602 ENCODE Processing Pipeline ca641269312852ed4413c0935cac954c https://www.encodeproject.org/files/ENCFF629KKG/@@download/ENCFF629KKG.bigBed hg19 released control low read depth, mixed read lengths, low read length, low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000OAO bam alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OBB 1291463709 Richard Myers, HAIB dbdc8e6f75c73c64ccac21113c418b9a https://www.encodeproject.org/files/ENCFF000OAO/@@download/ENCFF000OAO.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000OAP bigBed broadPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TYI 1616649 Richard Myers, HAIB 92aa549f0ea1f3533d3b8e61918390f2 https://www.encodeproject.org/files/ENCFF000OAP/@@download/ENCFF000OAP.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000OAQ bigBed broadPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TYJ 1714943 Richard Myers, HAIB e2b9a81ac74b96d42e887d63b984fba1 https://www.encodeproject.org/files/ENCFF000OAQ/@@download/ENCFF000OAQ.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000OAR bam alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OBE 1304539164 Richard Myers, HAIB 4349753a4fcaa55782ece69642933bcd https://www.encodeproject.org/files/ENCFF000OAR/@@download/ENCFF000OAR.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000OAT bigWig raw signal ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 119320345 Richard Myers, HAIB 0259bbc36bcc0424779084adccd69da5 https://www.encodeproject.org/files/ENCFF000OAT/@@download/ENCFF000OAT.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample ENCFF000OAV bigWig raw signal ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 129039927 Richard Myers, HAIB c82dfa76a8d96a4534d4487857286c3f https://www.encodeproject.org/files/ENCFF000OAV/@@download/ENCFF000OAV.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample ENCFF000OBB fastq reads ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1888750897 Richard Myers, HAIB 5b77b7903fd3b50615629e1eca254e25 https://www.encodeproject.org/files/ENCFF000OBB/@@download/ENCFF000OBB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODG/ released inconsistent control read length, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000OBE fastq reads ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 2174113476 Richard Myers, HAIB 8ebc26278136df2f2d43683e5849e626 https://www.encodeproject.org/files/ENCFF000OBE/@@download/ENCFF000OBE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODJ/ released inconsistent control read length, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF001TYI bed broadPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 847298 Richard Myers, HAIB feb44a14128795975f3153b197ec79af https://www.encodeproject.org/files/ENCFF001TYI/@@download/ENCFF001TYI.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample ENCFF001TYJ bed broadPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 886866 Richard Myers, HAIB 43e06571a01b40fe48958f157bee3915 https://www.encodeproject.org/files/ENCFF001TYJ/@@download/ENCFF001TYJ.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample ENCFF002CHO bed narrowPeak optimal idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 590379 ENCODE Consortium Analysis Working Group 88dffe9237451b6aecab755ae94462fd https://www.encodeproject.org/files/ENCFF002CHO/@@download/ENCFF002CHO.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample ENCFF558QBE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CHO 1443272 ENCODE Consortium d298e09f01cd36f16ec8e0de2c997e29 https://www.encodeproject.org/files/ENCFF558QBE/@@download/ENCFF558QBE.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF020RXG bam unfiltered alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OBE, ENCFF807MUK 2159896569 ENCODE Processing Pipeline 9a0c9d6a16eedea7fc94ebf5bf72a3b4 https://www.encodeproject.org/files/ENCFF020RXG/@@download/ENCFF020RXG.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF668XIT bam unfiltered alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OBB, ENCFF643CGH 1917176049 ENCODE Processing Pipeline 791acec050a3a163a47941b1671e3584 https://www.encodeproject.org/files/ENCFF668XIT/@@download/ENCFF668XIT.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF726CVN bam unfiltered alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OBB, ENCFF807MUK 1913984884 ENCODE Processing Pipeline c7ce074b972201ec6a2292031d643d62 https://www.encodeproject.org/files/ENCFF726CVN/@@download/ENCFF726CVN.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF865BUP bam alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OBB, ENCFF807MUK 730991573 ENCODE Processing Pipeline ea451bf9500b1027f5336de0adf709f7 https://www.encodeproject.org/files/ENCFF865BUP/@@download/ENCFF865BUP.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF418NDO bam alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OBB, ENCFF643CGH 734328978 ENCODE Processing Pipeline 24ff006ae8b04a65da3529f958c75f12 https://www.encodeproject.org/files/ENCFF418NDO/@@download/ENCFF418NDO.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF591BQK bam alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OBE, ENCFF807MUK 752226113 ENCODE Processing Pipeline e5ae3519b6a9f8488912e3e192b6c7f6 https://www.encodeproject.org/files/ENCFF591BQK/@@download/ENCFF591BQK.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF795DHE bam unfiltered alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OBE, ENCFF643CGH 2163490981 ENCODE Processing Pipeline f209dc588a699f33b81325f92743143c https://www.encodeproject.org/files/ENCFF795DHE/@@download/ENCFF795DHE.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF036AWP bam alignments ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OBE, ENCFF643CGH 755210701 ENCODE Processing Pipeline cbb8035725332d14c6dfd204116a12e3 https://www.encodeproject.org/files/ENCFF036AWP/@@download/ENCFF036AWP.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF917WUN bigWig signal p-value ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF416BIN, ENCFF818ZLY, ENCFF865BUP 588015247 ENCODE Processing Pipeline 1258829cfe1298a7f1f288deb982f388 https://www.encodeproject.org/files/ENCFF917WUN/@@download/ENCFF917WUN.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF297FPN bigWig signal p-value ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF416BIN, ENCFF591BQK, ENCFF818ZLY 622151934 ENCODE Processing Pipeline d9de2394514dcdc495ec1c6dda995897 https://www.encodeproject.org/files/ENCFF297FPN/@@download/ENCFF297FPN.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF949LAB bigWig signal p-value ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF416BIN, ENCFF591BQK, ENCFF818ZLY, ENCFF865BUP 709321749 ENCODE Processing Pipeline 440daf455231100de08d07de24f69db9 https://www.encodeproject.org/files/ENCFF949LAB/@@download/ENCFF949LAB.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF644WID bigWig fold change over control ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF416BIN, ENCFF818ZLY, ENCFF865BUP 345471803 ENCODE Processing Pipeline 30ce04dcb0a255d2c467c67eef495624 https://www.encodeproject.org/files/ENCFF644WID/@@download/ENCFF644WID.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF593AJA bigWig fold change over control ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF416BIN, ENCFF591BQK, ENCFF818ZLY 360733904 ENCODE Processing Pipeline d05aa19c748edea25324f31f6deea27e https://www.encodeproject.org/files/ENCFF593AJA/@@download/ENCFF593AJA.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF368HBX bigWig fold change over control ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF416BIN, ENCFF591BQK, ENCFF818ZLY, ENCFF865BUP 557809721 ENCODE Processing Pipeline 77e7108e74b5bee5b0b73a226ea87a96 https://www.encodeproject.org/files/ENCFF368HBX/@@download/ENCFF368HBX.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF879SHG bed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF416BIN, ENCFF818ZLY, ENCFF865BUP 6758714 ENCODE Processing Pipeline 5e93c7295b5b593f91a509b6fe23f11b https://www.encodeproject.org/files/ENCFF879SHG/@@download/ENCFF879SHG.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF591LRS bed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF416BIN, ENCFF591BQK, ENCFF818ZLY 6659552 ENCODE Processing Pipeline 8c8c2d8412f808ae8d170201a02edb5d https://www.encodeproject.org/files/ENCFF591LRS/@@download/ENCFF591LRS.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF630QJJ bed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF416BIN, ENCFF591BQK, ENCFF818ZLY, ENCFF865BUP 6990535 ENCODE Processing Pipeline b1bdc3fff65041bb6cc7077f95f3d74c https://www.encodeproject.org/files/ENCFF630QJJ/@@download/ENCFF630QJJ.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF939BPS bigBed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF879SHG 11650298 ENCODE Processing Pipeline a0fb0686d578a33303706d72a67eaff2 https://www.encodeproject.org/files/ENCFF939BPS/@@download/ENCFF939BPS.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF639GMF bigBed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF591LRS 11743673 ENCODE Processing Pipeline 34f401ccc2567c2181c664065564ae80 https://www.encodeproject.org/files/ENCFF639GMF/@@download/ENCFF639GMF.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF773BJM bigBed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF630QJJ 11683828 ENCODE Processing Pipeline 0b4184ba92ab5df218d3771d265a067e https://www.encodeproject.org/files/ENCFF773BJM/@@download/ENCFF773BJM.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF587YZD bed narrowPeak conservative idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF591LRS, ENCFF630QJJ, ENCFF879SHG 770947 ENCODE Processing Pipeline 2a62f1a3226d5ff0a91a3469fb6ab8e6 https://www.encodeproject.org/files/ENCFF587YZD/@@download/ENCFF587YZD.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF719TKY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587YZD 1791763 ENCODE Processing Pipeline d88c6dc938191b1fb60ba91aaa945565 https://www.encodeproject.org/files/ENCFF719TKY/@@download/ENCFF719TKY.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF120VUT bed narrowPeak optimal idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF591LRS, ENCFF630QJJ, ENCFF879SHG 820085 ENCODE Processing Pipeline bca31e848a128f562b9082c678c3ad04 https://www.encodeproject.org/files/ENCFF120VUT/@@download/ENCFF120VUT.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF937DJK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF120VUT 1885804 ENCODE Processing Pipeline 9656dabb1ba82ef1e8b5e8999682a64e https://www.encodeproject.org/files/ENCFF937DJK/@@download/ENCFF937DJK.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF133ISK bigWig signal p-value ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF418NDO, ENCFF862QZT 530896721 ENCODE Processing Pipeline 5900df25e364650747ab6c68c25c215d https://www.encodeproject.org/files/ENCFF133ISK/@@download/ENCFF133ISK.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF770SHV bigWig signal p-value ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF036AWP, ENCFF289ONG, ENCFF862QZT 553017377 ENCODE Processing Pipeline b9ac3f60b8d2097215969def817a0f53 https://www.encodeproject.org/files/ENCFF770SHV/@@download/ENCFF770SHV.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF776ZUU bigWig signal p-value ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036AWP, ENCFF289ONG, ENCFF418NDO, ENCFF862QZT 701914670 ENCODE Processing Pipeline 7fa36fbdaa720c065afc759ed4bb5612 https://www.encodeproject.org/files/ENCFF776ZUU/@@download/ENCFF776ZUU.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF355BAY bigWig fold change over control ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF418NDO, ENCFF862QZT 353686926 ENCODE Processing Pipeline f9faf2710b5ef9fdc8ecfd7e5eb176eb https://www.encodeproject.org/files/ENCFF355BAY/@@download/ENCFF355BAY.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF340BYJ bigWig fold change over control ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF036AWP, ENCFF289ONG, ENCFF862QZT 362699813 ENCODE Processing Pipeline 7bacebcbe4c99cc34b743b83e162a866 https://www.encodeproject.org/files/ENCFF340BYJ/@@download/ENCFF340BYJ.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF600UCV bigWig fold change over control ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036AWP, ENCFF289ONG, ENCFF418NDO, ENCFF862QZT 558154629 ENCODE Processing Pipeline d8ce1cf028ad690150d7391ba192a432 https://www.encodeproject.org/files/ENCFF600UCV/@@download/ENCFF600UCV.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF409RXS bed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF418NDO, ENCFF862QZT 7062241 ENCODE Processing Pipeline 3de8be550eeaa27cf8e56e84f5a746e6 https://www.encodeproject.org/files/ENCFF409RXS/@@download/ENCFF409RXS.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF786LVK bed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF036AWP, ENCFF289ONG, ENCFF862QZT 7054015 ENCODE Processing Pipeline 6f366cd52ed9a55f10dbd823edd03cd8 https://www.encodeproject.org/files/ENCFF786LVK/@@download/ENCFF786LVK.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF987SUJ bed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036AWP, ENCFF289ONG, ENCFF418NDO, ENCFF862QZT 7316535 ENCODE Processing Pipeline c94b26f936b215913251a9368624d896 https://www.encodeproject.org/files/ENCFF987SUJ/@@download/ENCFF987SUJ.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF030ITY bigBed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF409RXS 11995700 ENCODE Processing Pipeline 22d0cb1e0c34aa3ae2fd8556e8d252cf https://www.encodeproject.org/files/ENCFF030ITY/@@download/ENCFF030ITY.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF755HUJ bigBed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF786LVK 12191978 ENCODE Processing Pipeline 622b48b875b880b2fac3b31ad46a6d10 https://www.encodeproject.org/files/ENCFF755HUJ/@@download/ENCFF755HUJ.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF986OZR bigBed narrowPeak peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF987SUJ 12058517 ENCODE Processing Pipeline aeffc40459564716ac8ae931cc3d858c https://www.encodeproject.org/files/ENCFF986OZR/@@download/ENCFF986OZR.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF794VYB bed narrowPeak conservative idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF409RXS, ENCFF419RSJ, ENCFF786LVK, ENCFF987SUJ 835693 ENCODE Processing Pipeline 5333557c51cf9ead1a16cde22274d734 https://www.encodeproject.org/files/ENCFF794VYB/@@download/ENCFF794VYB.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF211AJX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF794VYB 1902071 ENCODE Processing Pipeline c2f28507b5fad6bd5a0efc5795cc0357 https://www.encodeproject.org/files/ENCFF211AJX/@@download/ENCFF211AJX.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF455ZLJ bed narrowPeak optimal idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF409RXS, ENCFF419RSJ, ENCFF786LVK, ENCFF987SUJ 889824 ENCODE Processing Pipeline 09d7e00ece3d0d68c1485b38d2c7fe64 https://www.encodeproject.org/files/ENCFF455ZLJ/@@download/ENCFF455ZLJ.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF977WLL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF455ZLJ 2004850 ENCODE Processing Pipeline c31f069b0643f5e7b6f628f50cb5495b https://www.encodeproject.org/files/ENCFF977WLL/@@download/ENCFF977WLL.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000NGT bam alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NHI 1677195167 Richard Myers, HAIB c9ab5a48a9a2aa940f85e54c77f1ca78 https://www.encodeproject.org/files/ENCFF000NGT/@@download/ENCFF000NGT.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NGU bigBed broadPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TTN 221355 Richard Myers, HAIB d4938950e6a0bb159f2d366270a8a622 https://www.encodeproject.org/files/ENCFF000NGU/@@download/ENCFF000NGU.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NGV bigBed broadPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TTO 244825 Richard Myers, HAIB c3136c2f810e8ed8c7b264076da9da84 https://www.encodeproject.org/files/ENCFF000NGV/@@download/ENCFF000NGV.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NGW bam alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NHG 1312059815 Richard Myers, HAIB c281707a076a25809a057c5eb8cc979a https://www.encodeproject.org/files/ENCFF000NGW/@@download/ENCFF000NGW.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NGX bigWig raw signal ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 1 16250661 Richard Myers, HAIB ef821b16a64333c19679414b5f03948e https://www.encodeproject.org/files/ENCFF000NGX/@@download/ENCFF000NGX.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NGZ bigWig raw signal ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 1 13602952 Richard Myers, HAIB e1980c362771ac91135915ea0923cd89 https://www.encodeproject.org/files/ENCFF000NGZ/@@download/ENCFF000NGZ.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NHG fastq reads ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1259009468 Richard Myers, HAIB 51e84bb2faaff699fbdc20941cd15a10 https://www.encodeproject.org/files/ENCFF000NHG/@@download/ENCFF000NHG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF000NHI fastq reads ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1692796569 Richard Myers, HAIB d713c309a0c9b000f25a067b477f6795 https://www.encodeproject.org/files/ENCFF000NHI/@@download/ENCFF000NHI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF001TTN bed broadPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 1 117129 Richard Myers, HAIB 1b616994f2f397853ba03a1984014bb0 https://www.encodeproject.org/files/ENCFF001TTN/@@download/ENCFF001TTN.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF001TTO bed broadPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 1 128548 Richard Myers, HAIB 6cad4e8a3ed3cf463bc5b327cfe0c019 https://www.encodeproject.org/files/ENCFF001TTO/@@download/ENCFF001TTO.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF002CFZ bed narrowPeak optimal idr thresholded peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 122023 ENCODE Consortium Analysis Working Group b22ea9d58598b742790c5b6682dda181 https://www.encodeproject.org/files/ENCFF002CFZ/@@download/ENCFF002CFZ.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF967NVM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE ENCFF002CFZ 390068 ENCODE Consortium ac97077b7731c1c9106c6cbd1c1997cf https://www.encodeproject.org/files/ENCFF967NVM/@@download/ENCFF967NVM.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF842ISP bam alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHG, ENCFF643CGH 913396409 ENCODE Processing Pipeline 820a5dd379440e4198aa83049231698f https://www.encodeproject.org/files/ENCFF842ISP/@@download/ENCFF842ISP.bam GRCh38 released low read length biological replicates with identical biosample ENCFF766RXA bam unfiltered alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHG, ENCFF643CGH 1405656183 ENCODE Processing Pipeline ce76b040b178dddd2561bfd0f0cf0950 https://www.encodeproject.org/files/ENCFF766RXA/@@download/ENCFF766RXA.bam GRCh38 released low read length biological replicates with identical biosample ENCFF089EEX bam alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHI, ENCFF643CGH 1093076456 ENCODE Processing Pipeline 5509e07e0c0b4075c9a423a2fc7ee6a4 https://www.encodeproject.org/files/ENCFF089EEX/@@download/ENCFF089EEX.bam GRCh38 released low read length biological replicates with identical biosample ENCFF228VUS bam unfiltered alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHI, ENCFF643CGH 1820285869 ENCODE Processing Pipeline cb0a25c37af7004db96961eb18f22ed8 https://www.encodeproject.org/files/ENCFF228VUS/@@download/ENCFF228VUS.bam GRCh38 released low read length biological replicates with identical biosample ENCFF465JTP bam unfiltered alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHG, ENCFF807MUK 1401821278 ENCODE Processing Pipeline f29c52edd995206a5de1b7f9a3a789e4 https://www.encodeproject.org/files/ENCFF465JTP/@@download/ENCFF465JTP.bam hg19 released low read length biological replicates with identical biosample ENCFF139WTG bam alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHG, ENCFF807MUK 913451977 ENCODE Processing Pipeline 26918aef90b57a33d8a90c494ac67c06 https://www.encodeproject.org/files/ENCFF139WTG/@@download/ENCFF139WTG.bam hg19 released low read length biological replicates with identical biosample ENCFF165JIN bam unfiltered alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHI, ENCFF807MUK 1815628785 ENCODE Processing Pipeline 8325165c4a98ad4bbde02832f1ec64ab https://www.encodeproject.org/files/ENCFF165JIN/@@download/ENCFF165JIN.bam hg19 released low read length biological replicates with identical biosample ENCFF218ESX bam alignments ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHI, ENCFF807MUK 1093161462 ENCODE Processing Pipeline a4f1fb09469d85e744aeb32496f081e9 https://www.encodeproject.org/files/ENCFF218ESX/@@download/ENCFF218ESX.bam hg19 released low read length biological replicates with identical biosample ENCFF213NHC bigWig signal p-value ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 ENCFF089EEX, ENCFF656HEF 614902850 ENCODE Processing Pipeline 29b66d00ac07dfa9e96dd6a4364ab175 https://www.encodeproject.org/files/ENCFF213NHC/@@download/ENCFF213NHC.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF256PQO bigWig signal p-value ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF842ISP 565345503 ENCODE Processing Pipeline 1eccff733eca1027bd66dfb2b75f5842 https://www.encodeproject.org/files/ENCFF256PQO/@@download/ENCFF256PQO.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF971LSF bigWig signal p-value ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF089EEX, ENCFF656HEF, ENCFF842ISP 848499175 ENCODE Processing Pipeline 9532a348db6340cadfd2ac81b6cbde61 https://www.encodeproject.org/files/ENCFF971LSF/@@download/ENCFF971LSF.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF043CDP bigWig fold change over control ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF089EEX, ENCFF656HEF, ENCFF842ISP 906781577 ENCODE Processing Pipeline d5b96c807c4d7a1a34280b016e69cc19 https://www.encodeproject.org/files/ENCFF043CDP/@@download/ENCFF043CDP.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF411VJF bed narrowPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 ENCFF089EEX, ENCFF656HEF 5975687 ENCODE Processing Pipeline 154c84b0d37ba434bc197a73af71b1bc https://www.encodeproject.org/files/ENCFF411VJF/@@download/ENCFF411VJF.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF473RTH bigBed narrowPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 ENCFF531PJP 12908036 ENCODE Processing Pipeline c55f33cefd35fb6a952070292a544d6f https://www.encodeproject.org/files/ENCFF473RTH/@@download/ENCFF473RTH.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF240WIO bigBed narrowPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF464OLU 13054846 ENCODE Processing Pipeline 6b3900e1d6be3337ee74566e913caea6 https://www.encodeproject.org/files/ENCFF240WIO/@@download/ENCFF240WIO.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF823WEU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF582OZH 298171 ENCODE Processing Pipeline cf0cd899b5dc010f86b8b509fbca435f https://www.encodeproject.org/files/ENCFF823WEU/@@download/ENCFF823WEU.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF594GNP bigWig fold change over control ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 ENCFF089EEX, ENCFF656HEF 579506584 ENCODE Processing Pipeline 5c28943a343d0a7f60f131bf9a9b0a2e https://www.encodeproject.org/files/ENCFF594GNP/@@download/ENCFF594GNP.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF582OZH bed narrowPeak conservative idr thresholded peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF411VJF, ENCFF419RSJ, ENCFF464OLU, ENCFF531PJP 131084 ENCODE Processing Pipeline 88fd6cdb1a9721c9cef0f1d04492b397 https://www.encodeproject.org/files/ENCFF582OZH/@@download/ENCFF582OZH.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF013FCN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF189NMX 329682 ENCODE Processing Pipeline 0b1491e36f5a4a9557e7b6e58d3533ae https://www.encodeproject.org/files/ENCFF013FCN/@@download/ENCFF013FCN.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF654HSR bigWig fold change over control ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF842ISP 549646739 ENCODE Processing Pipeline 7c4e213133dd8e9cdb792f5693623de4 https://www.encodeproject.org/files/ENCFF654HSR/@@download/ENCFF654HSR.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF464OLU bed narrowPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF089EEX, ENCFF656HEF, ENCFF842ISP 6820309 ENCODE Processing Pipeline 39d7d284c153743cb0b25f58c582fcbc https://www.encodeproject.org/files/ENCFF464OLU/@@download/ENCFF464OLU.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF531PJP bed narrowPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF842ISP 6429059 ENCODE Processing Pipeline 31f707adbea16498eb421de407d250cd https://www.encodeproject.org/files/ENCFF531PJP/@@download/ENCFF531PJP.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF764FVP bigBed narrowPeak peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1 ENCFF411VJF 13217679 ENCODE Processing Pipeline 35440c9796777bea2a19f479d603ca43 https://www.encodeproject.org/files/ENCFF764FVP/@@download/ENCFF764FVP.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF189NMX bed narrowPeak optimal idr thresholded peaks ENCSR000BRL ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIX5-human ENCAB000AKV DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF411VJF, ENCFF419RSJ, ENCFF464OLU, ENCFF531PJP 149994 ENCODE Processing Pipeline 1814339a864f8b8758c575576e6d5258 https://www.encodeproject.org/files/ENCFF189NMX/@@download/ENCFF189NMX.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF000RDE bam alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000RDS 1440326795 Richard Myers, HAIB c75d7b2cefaa4197f16b7ef0b4080731 https://www.encodeproject.org/files/ENCFF000RDE/@@download/ENCFF000RDE.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RDF bigBed broadPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UQF 265105 Richard Myers, HAIB 2139646714a66c3a947a466b5fa145c3 https://www.encodeproject.org/files/ENCFF000RDF/@@download/ENCFF000RDF.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RDG bam alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000RDR 1453143371 Richard Myers, HAIB 39afb08bead873d98e9e09eb044df276 https://www.encodeproject.org/files/ENCFF000RDG/@@download/ENCFF000RDG.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RDH bigBed broadPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UQG 666330 Richard Myers, HAIB b9b1d7da4575cc5541b0620032572c32 https://www.encodeproject.org/files/ENCFF000RDH/@@download/ENCFF000RDH.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RDI bigWig raw signal ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 17541181 Richard Myers, HAIB 7574160a93744ff8ebc7eaacc5dcaa35 https://www.encodeproject.org/files/ENCFF000RDI/@@download/ENCFF000RDI.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RDK bigWig raw signal ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 25115827 Richard Myers, HAIB 8928d8b81d7ca38daf93c875c357bbc0 https://www.encodeproject.org/files/ENCFF000RDK/@@download/ENCFF000RDK.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RDR fastq reads ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1477305399 Richard Myers, HAIB 474162d5a3cfecb646684645dda5b162 https://www.encodeproject.org/files/ENCFF000RDR/@@download/ENCFF000RDR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RCC/ released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RDS fastq reads ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1483067580 Richard Myers, HAIB e5be3b641a1cd36196910056546e2919 https://www.encodeproject.org/files/ENCFF000RDS/@@download/ENCFF000RDS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RCC/ released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UQF bed broadPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 148910 Richard Myers, HAIB 5e76dd10fb62e93d8e58c6252694b757 https://www.encodeproject.org/files/ENCFF001UQF/@@download/ENCFF001UQF.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UQG bed broadPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 414375 Richard Myers, HAIB da8b05e4339db136073fb60235c335ff https://www.encodeproject.org/files/ENCFF001UQG/@@download/ENCFF001UQG.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CNN bed narrowPeak optimal idr thresholded peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 312512 ENCODE Consortium Analysis Working Group f7d783668cd94e5bdfcd189e4507f1ac https://www.encodeproject.org/files/ENCFF002CNN/@@download/ENCFF002CNN.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF756IGL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE ENCFF002CNN 814578 ENCODE Consortium 8ff74d55b1b406b4d78c404d4d8eb623 https://www.encodeproject.org/files/ENCFF756IGL/@@download/ENCFF756IGL.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF833WOK bam unfiltered alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RDR, ENCFF643CGH 1564157531 ENCODE Processing Pipeline 9873e572a820306657203a12c731b574 https://www.encodeproject.org/files/ENCFF833WOK/@@download/ENCFF833WOK.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF316XFH bam alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RDR, ENCFF643CGH 698288274 ENCODE Processing Pipeline 246f571fd1fa85f17a388d1f83ed5ff8 https://www.encodeproject.org/files/ENCFF316XFH/@@download/ENCFF316XFH.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF511XTS bam alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RDS, ENCFF643CGH 763817119 ENCODE Processing Pipeline ae14b94fa876d870e290f64e96fa748b https://www.encodeproject.org/files/ENCFF511XTS/@@download/ENCFF511XTS.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF958VAF bam unfiltered alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RDS, ENCFF643CGH 1564023347 ENCODE Processing Pipeline 5dc79fb5a6b1d0e63c36e77637d980b9 https://www.encodeproject.org/files/ENCFF958VAF/@@download/ENCFF958VAF.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF327WGZ bam unfiltered alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RDS, ENCFF807MUK 1556375325 ENCODE Processing Pipeline 8dcc191733c7874f5d27a95a8fc22223 https://www.encodeproject.org/files/ENCFF327WGZ/@@download/ENCFF327WGZ.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF125YJB bam unfiltered alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RDR, ENCFF807MUK 1558164262 ENCODE Processing Pipeline 8d8b5a96601f667f4922e560818a71b3 https://www.encodeproject.org/files/ENCFF125YJB/@@download/ENCFF125YJB.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF916OWO bam alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RDS, ENCFF807MUK 764192275 ENCODE Processing Pipeline 68954f7faa8dd1f83ba422315aa4315b https://www.encodeproject.org/files/ENCFF916OWO/@@download/ENCFF916OWO.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF185JZF bam alignments ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RDR, ENCFF807MUK 698587648 ENCODE Processing Pipeline 44e70fffbf2f7f20708d5d062660d076 https://www.encodeproject.org/files/ENCFF185JZF/@@download/ENCFF185JZF.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF185UJL bigWig signal p-value ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF511XTS, ENCFF798ORT 459293764 ENCODE Processing Pipeline 5c48865f14cfee95faca94445702cdbe https://www.encodeproject.org/files/ENCFF185UJL/@@download/ENCFF185UJL.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF497TIP bigWig signal p-value ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF316XFH, ENCFF798ORT 498847891 ENCODE Processing Pipeline b16969a64fa1f887b0f570c3b66ddbfa https://www.encodeproject.org/files/ENCFF497TIP/@@download/ENCFF497TIP.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF167MXL bigWig signal p-value ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF316XFH, ENCFF511XTS, ENCFF798ORT 606725149 ENCODE Processing Pipeline 45bf28b5a7310711c0f17b2822fe08cb https://www.encodeproject.org/files/ENCFF167MXL/@@download/ENCFF167MXL.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF139CGS bigWig fold change over control ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF511XTS, ENCFF798ORT 364471765 ENCODE Processing Pipeline f1070579d255a8a12e33d36f0e24b30f https://www.encodeproject.org/files/ENCFF139CGS/@@download/ENCFF139CGS.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF867MCT bigWig fold change over control ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF316XFH, ENCFF798ORT 329768686 ENCODE Processing Pipeline 7c9657d735c4cbbb8a40cc4698fb7417 https://www.encodeproject.org/files/ENCFF867MCT/@@download/ENCFF867MCT.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF342FDS bigWig fold change over control ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF316XFH, ENCFF511XTS, ENCFF798ORT 610194035 ENCODE Processing Pipeline d5fb34ee0afff4d38dc4c467e71a6f29 https://www.encodeproject.org/files/ENCFF342FDS/@@download/ENCFF342FDS.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF358MIL bed narrowPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF316XFH, ENCFF798ORT 4896777 ENCODE Processing Pipeline 0e1ddb85587263b78900368b9f0e240e https://www.encodeproject.org/files/ENCFF358MIL/@@download/ENCFF358MIL.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF255DCQ bed narrowPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF511XTS, ENCFF798ORT 3975964 ENCODE Processing Pipeline e4ffdffeb4c163597c07a687f315e6c0 https://www.encodeproject.org/files/ENCFF255DCQ/@@download/ENCFF255DCQ.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF631JWG bigBed narrowPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF358MIL 10821248 ENCODE Processing Pipeline e26be20fc52264b4f334b7df70b16db1 https://www.encodeproject.org/files/ENCFF631JWG/@@download/ENCFF631JWG.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF313XJY bigBed narrowPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF255DCQ 10422509 ENCODE Processing Pipeline 08d8fc3416def9edaa0972cc41ff4c60 https://www.encodeproject.org/files/ENCFF313XJY/@@download/ENCFF313XJY.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF407IDB bed narrowPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF316XFH, ENCFF511XTS, ENCFF798ORT 5426644 ENCODE Processing Pipeline 0ea8ad16380eb3d7ff63e2b640be0b20 https://www.encodeproject.org/files/ENCFF407IDB/@@download/ENCFF407IDB.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF176NGG bigBed narrowPeak peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF407IDB 11183960 ENCODE Processing Pipeline 1b1ff506caff64c381bee9afee03013b https://www.encodeproject.org/files/ENCFF176NGG/@@download/ENCFF176NGG.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF300PAY bed narrowPeak conservative idr thresholded peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF255DCQ, ENCFF358MIL, ENCFF407IDB, ENCFF419RSJ 219594 ENCODE Processing Pipeline 00044cdf1a07bb0558405aabbe5b377b https://www.encodeproject.org/files/ENCFF300PAY/@@download/ENCFF300PAY.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF423CTO bed narrowPeak optimal idr thresholded peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF255DCQ, ENCFF358MIL, ENCFF407IDB, ENCFF419RSJ 301234 ENCODE Processing Pipeline eaae94f5dda84be557f60e0d9f8d2b79 https://www.encodeproject.org/files/ENCFF423CTO/@@download/ENCFF423CTO.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF217OOK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF423CTO 575032 ENCODE Processing Pipeline 38f8db42116b63022fa5488a1c7dc250 https://www.encodeproject.org/files/ENCFF217OOK/@@download/ENCFF217OOK.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF749LZC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF300PAY 459997 ENCODE Processing Pipeline 3b95602e846ad879f4293c38290f9d16 https://www.encodeproject.org/files/ENCFF749LZC/@@download/ENCFF749LZC.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OMZ bigBed broadPeak peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAX 70572 Richard Myers, HAIB 55d214ad953cba21c2abb44139b3351f https://www.encodeproject.org/files/ENCFF000OMZ/@@download/ENCFF000OMZ.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking ENCFF000ONA bam alignments ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000ONH 641143860 Richard Myers, HAIB cfa64c7b59ee854938411e6f3e5404fb https://www.encodeproject.org/files/ENCFF000ONA/@@download/ENCFF000ONA.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking ENCFF000ONB bigWig raw signal ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 1 1905695 Richard Myers, HAIB 6d15229d8c4eabbbb8cead91f5ec3102 https://www.encodeproject.org/files/ENCFF000ONB/@@download/ENCFF000ONB.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from ENCFF000ONH fastq reads ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 608105654 Richard Myers, HAIB 5a3120044c59fa1e33aec3aef88c3535 https://www.encodeproject.org/files/ENCFF000ONH/@@download/ENCFF000ONH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking ENCFF001UAX bed broadPeak peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 1 24214 Richard Myers, HAIB 1b3ca5292990e5a8e84618495a18157d https://www.encodeproject.org/files/ENCFF001UAX/@@download/ENCFF001UAX.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from ENCFF638QOI bam alignments ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ONH, ENCFF807MUK 456453092 ENCODE Processing Pipeline 4c0963969d6ceea96220e13be1b87cb0 https://www.encodeproject.org/files/ENCFF638QOI/@@download/ENCFF638QOI.bam hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF534OAL bam unfiltered alignments ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ONH, ENCFF643CGH 763652519 ENCODE Processing Pipeline 705f307ca3c840b6075f87221271bbf4 https://www.encodeproject.org/files/ENCFF534OAL/@@download/ENCFF534OAL.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF827SDJ bam unfiltered alignments ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ONH, ENCFF807MUK 761384585 ENCODE Processing Pipeline 0c423d58aadf64a67fa733e273fadc59 https://www.encodeproject.org/files/ENCFF827SDJ/@@download/ENCFF827SDJ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF974QRX bam alignments ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ONH, ENCFF643CGH 456170230 ENCODE Processing Pipeline 17ec0524f538aebc3a5259aa88d012ff https://www.encodeproject.org/files/ENCFF974QRX/@@download/ENCFF974QRX.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF984OSF bigBed narrowPeak peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140VNN 8145834 ENCODE Processing Pipeline 768d3342ebfed735228e678f6d2b6d3b https://www.encodeproject.org/files/ENCFF984OSF/@@download/ENCFF984OSF.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF087VWX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140VNN, ENCFF419RSJ 12735 ENCODE Processing Pipeline 4a4d2cc1b3a86636535051ef3b4f8242 https://www.encodeproject.org/files/ENCFF087VWX/@@download/ENCFF087VWX.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF380MSS bigWig signal p-value ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF638QOI 478156673 ENCODE Processing Pipeline 6e993cc904a698fd98f9eabcbbbe4943 https://www.encodeproject.org/files/ENCFF380MSS/@@download/ENCFF380MSS.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF735TIA bigWig fold change over control ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF948LKH, ENCFF974QRX 251145291 ENCODE Processing Pipeline c78dbf2d1a163666413e94f3dc25f847 https://www.encodeproject.org/files/ENCFF735TIA/@@download/ENCFF735TIA.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF208VDW bigWig signal p-value ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF948LKH, ENCFF974QRX 420199716 ENCODE Processing Pipeline 7160e7cf8e553f5a68b866efe3790520 https://www.encodeproject.org/files/ENCFF208VDW/@@download/ENCFF208VDW.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF697OBV bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF001TDO, ENCFF686BCT 13736 ENCODE Processing Pipeline ff1abe30b9a68e0b8ddf0332ba500d19 https://www.encodeproject.org/files/ENCFF697OBV/@@download/ENCFF697OBV.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF140VNN bed narrowPeak peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF948LKH, ENCFF974QRX 3710816 ENCODE Processing Pipeline 5ab701c94372952011adf68b75319d04 https://www.encodeproject.org/files/ENCFF140VNN/@@download/ENCFF140VNN.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF686BCT bed narrowPeak peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF638QOI 3736105 ENCODE Processing Pipeline db3d8e882754797b05f67bf1ef499923 https://www.encodeproject.org/files/ENCFF686BCT/@@download/ENCFF686BCT.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF208LKJ bigBed narrowPeak peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF686BCT 8235614 ENCODE Processing Pipeline 1afece8f932789f6fc316678a3010f4b https://www.encodeproject.org/files/ENCFF208LKJ/@@download/ENCFF208LKJ.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF531SDA bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF697OBV 63215 ENCODE Processing Pipeline e618c9d3bccb8ece09475018095877c3 https://www.encodeproject.org/files/ENCFF531SDA/@@download/ENCFF531SDA.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF553MAY bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF087VWX 62423 ENCODE Processing Pipeline e7d8dbbec196a796326d7dab5da2cfa8 https://www.encodeproject.org/files/ENCFF553MAY/@@download/ENCFF553MAY.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF916NRL bigWig fold change over control ENCSR000BMJ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF638QOI 256762219 ENCODE Processing Pipeline 65daeb8a261aef00876c4981828fad4f https://www.encodeproject.org/files/ENCFF916NRL/@@download/ENCFF916NRL.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF000QZZ bam alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RAL 1445282075 Richard Myers, HAIB 5f4d39c136d76a2b03ab835fe2f9c21b https://www.encodeproject.org/files/ENCFF000QZZ/@@download/ENCFF000QZZ.bam hg19 archived low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000RAA bigBed broadPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UPR 87956 Richard Myers, HAIB 38110b1d9a5d93815118554c3f5c2fde https://www.encodeproject.org/files/ENCFF000RAA/@@download/ENCFF000RAA.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000RAB bigBed broadPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UPS 483392 Richard Myers, HAIB 8fcfda817ba78ece79762293dd29ec1d https://www.encodeproject.org/files/ENCFF000RAB/@@download/ENCFF000RAB.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000RAC bam alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RAO 2080170595 Richard Myers, HAIB a0e579bdc43899c595f965a821e8aec4 https://www.encodeproject.org/files/ENCFF000RAC/@@download/ENCFF000RAC.bam hg19 archived low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000RAD bigWig raw signal ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 11115475 Richard Myers, HAIB 83282304e62c8cb9e55baf067aa4ac5e https://www.encodeproject.org/files/ENCFF000RAD/@@download/ENCFF000RAD.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000RAF bigWig raw signal ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 38033763 Richard Myers, HAIB b09d5f9524be2c90fe18cd108f62fdda https://www.encodeproject.org/files/ENCFF000RAF/@@download/ENCFF000RAF.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000RAL fastq reads ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1184386272 Richard Myers, HAIB 6134de82b5005c3513880b25c76dfa43 https://www.encodeproject.org/files/ENCFF000RAL/@@download/ENCFF000RAL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RBV/ released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000RAO fastq reads ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1600960648 Richard Myers, HAIB 7102c8eb701e11b08f1900ad0a27012b https://www.encodeproject.org/files/ENCFF000RAO/@@download/ENCFF000RAO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RBV/ released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF001UPR bed broadPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 24710 Richard Myers, HAIB 56d40f7efca785a2f2d998d3b15f523c https://www.encodeproject.org/files/ENCFF001UPR/@@download/ENCFF001UPR.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF001UPS bed broadPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 236985 Richard Myers, HAIB 968484794f6b9489ca85d898651d3d0b https://www.encodeproject.org/files/ENCFF001UPS/@@download/ENCFF001UPS.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF002CNJ bed narrowPeak optimal idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 358708 ENCODE Consortium Analysis Working Group 1049533d6b97f7574b73c5a0e67a3edf https://www.encodeproject.org/files/ENCFF002CNJ/@@download/ENCFF002CNJ.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF609TKL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE ENCFF002CNJ 661535 ENCODE Consortium 61972f29565947e018690c12dfa8440b https://www.encodeproject.org/files/ENCFF609TKL/@@download/ENCFF609TKL.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF765AGL bam unfiltered alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 32 ENCFF000RAL, ENCFF643CGH 1364515933 ENCODE Processing Pipeline 5a4df7c36befa9cdbf14fa7cee2090cd https://www.encodeproject.org/files/ENCFF765AGL/@@download/ENCFF765AGL.bam GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF347EJI bam alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 32 ENCFF000RAL, ENCFF643CGH 508140908 ENCODE Processing Pipeline 3dabed910ca20e140c3851d5b9a4eb0b https://www.encodeproject.org/files/ENCFF347EJI/@@download/ENCFF347EJI.bam GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF712XHP bam unfiltered alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 32 ENCFF000RAL, ENCFF807MUK 1362665401 ENCODE Processing Pipeline 165594495f91a37c37430a6f54dfd943 https://www.encodeproject.org/files/ENCFF712XHP/@@download/ENCFF712XHP.bam hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF601DDB bam alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 32 ENCFF000RAL, ENCFF807MUK 508229958 ENCODE Processing Pipeline ab286c9960730e47690d2058088a2e57 https://www.encodeproject.org/files/ENCFF601DDB/@@download/ENCFF601DDB.bam hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF991GDN bam unfiltered alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 32 ENCFF000RAO, ENCFF807MUK 1755365603 ENCODE Processing Pipeline bc13e9359d1a846efa3897da72af6469 https://www.encodeproject.org/files/ENCFF991GDN/@@download/ENCFF991GDN.bam hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF523AMT bam alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 32 ENCFF000RAO, ENCFF643CGH 621339203 ENCODE Processing Pipeline 1f6fc82836df89e6da80382597cb6760 https://www.encodeproject.org/files/ENCFF523AMT/@@download/ENCFF523AMT.bam GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF950YAN bam alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 32 ENCFF000RAO, ENCFF807MUK 621556925 ENCODE Processing Pipeline 3b42e919890f8461add3c1720247a482 https://www.encodeproject.org/files/ENCFF950YAN/@@download/ENCFF950YAN.bam hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF100IEA bam unfiltered alignments ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 32 ENCFF000RAO, ENCFF643CGH 1758255811 ENCODE Processing Pipeline 556d85f56710ad93919483d3951ada55 https://www.encodeproject.org/files/ENCFF100IEA/@@download/ENCFF100IEA.bam GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF770MYB bed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF154IKH, ENCFF347EJI 30955 ENCODE Processing Pipeline efae8fbb5652a8d9300c18144639a62c https://www.encodeproject.org/files/ENCFF770MYB/@@download/ENCFF770MYB.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF644XIO bed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF154IKH, ENCFF523AMT 1332138 ENCODE Processing Pipeline 35116c86ce81901722574f21be3c83ba https://www.encodeproject.org/files/ENCFF644XIO/@@download/ENCFF644XIO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF132RGF bigBed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF602BIH 10579640 ENCODE Processing Pipeline af042eeb9bc1bd8043ba16ff8e8fa9af https://www.encodeproject.org/files/ENCFF132RGF/@@download/ENCFF132RGF.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF513JBS bigBed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF639APX 2735813 ENCODE Processing Pipeline e22ec933430e018246f87f96ccc7abab https://www.encodeproject.org/files/ENCFF513JBS/@@download/ENCFF513JBS.bigBed hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF458KOT bed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF410PKI, ENCFF601DDB, ENCFF950YAN 4820553 ENCODE Processing Pipeline c8e96fe29d6c959225a226ade0de4bc0 https://www.encodeproject.org/files/ENCFF458KOT/@@download/ENCFF458KOT.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF153TZT bigBed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF644HHB 115042 ENCODE Processing Pipeline dc3fc9b58d5f170cb1f0edc19707285a https://www.encodeproject.org/files/ENCFF153TZT/@@download/ENCFF153TZT.bigBed hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF540XNF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF269ZSB 83713 ENCODE Processing Pipeline 49bb875365fabfda537488f08c796dfc https://www.encodeproject.org/files/ENCFF540XNF/@@download/ENCFF540XNF.bigBed hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF946MYA bed narrowPeak optimal idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF458KOT, ENCFF639APX, ENCFF644HHB 46236 ENCODE Processing Pipeline e416fd7813f52a1578336e19c89685f0 https://www.encodeproject.org/files/ENCFF946MYA/@@download/ENCFF946MYA.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF094DPC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF946MYA 123727 ENCODE Processing Pipeline d29d7a1b0e46367554f68de3996becdf https://www.encodeproject.org/files/ENCFF094DPC/@@download/ENCFF094DPC.bigBed hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF070ETF bigWig signal p-value ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF154IKH, ENCFF523AMT 202078355 ENCODE Processing Pipeline 6383fecc449afa37cc0bd0609a85347b https://www.encodeproject.org/files/ENCFF070ETF/@@download/ENCFF070ETF.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF855STS bigWig signal p-value ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF154IKH, ENCFF347EJI, ENCFF523AMT 180073477 ENCODE Processing Pipeline 304fc1e56928326973469a92190afdc1 https://www.encodeproject.org/files/ENCFF855STS/@@download/ENCFF855STS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF222CHH bigWig fold change over control ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF154IKH, ENCFF347EJI 182001053 ENCODE Processing Pipeline c3de01a3daf74a8f7be2ea08f0ba12e3 https://www.encodeproject.org/files/ENCFF222CHH/@@download/ENCFF222CHH.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF268TSB bigWig fold change over control ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF154IKH, ENCFF523AMT 208469559 ENCODE Processing Pipeline fb32bd8163ade1e90c7a8d3ef745d022 https://www.encodeproject.org/files/ENCFF268TSB/@@download/ENCFF268TSB.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF887KNE bigBed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF770MYB 115395 ENCODE Processing Pipeline d7cba14bee4bdc86b8b08bdf597b2744 https://www.encodeproject.org/files/ENCFF887KNE/@@download/ENCFF887KNE.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF159XXN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF520MMO 83724 ENCODE Processing Pipeline 01cf27e5b4f032fb8e295a364314b3a5 https://www.encodeproject.org/files/ENCFF159XXN/@@download/ENCFF159XXN.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF796YFZ bed narrowPeak optimal idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF602BIH, ENCFF644XIO, ENCFF770MYB 48086 ENCODE Processing Pipeline 204a6095ee98c7927665cea011d34b33 https://www.encodeproject.org/files/ENCFF796YFZ/@@download/ENCFF796YFZ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF726ZAY bigWig signal p-value ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF154IKH, ENCFF347EJI 199266497 ENCODE Processing Pipeline 13be0f1c980d174ff242488070a0e05e https://www.encodeproject.org/files/ENCFF726ZAY/@@download/ENCFF726ZAY.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF955MCC bigWig fold change over control ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF154IKH, ENCFF347EJI, ENCFF523AMT 347396322 ENCODE Processing Pipeline 71dd03f1eef87fb6cb707beafce1a6bc https://www.encodeproject.org/files/ENCFF955MCC/@@download/ENCFF955MCC.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF602BIH bed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF154IKH, ENCFF347EJI, ENCFF523AMT 4817882 ENCODE Processing Pipeline cd658da627d7db2b52a26e572a853225 https://www.encodeproject.org/files/ENCFF602BIH/@@download/ENCFF602BIH.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF896ZOK bigBed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF644XIO 2734361 ENCODE Processing Pipeline d9a2245d51308ce5391d4d6e3fbe3e8b https://www.encodeproject.org/files/ENCFF896ZOK/@@download/ENCFF896ZOK.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF520MMO bed narrowPeak conservative idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF602BIH, ENCFF644XIO, ENCFF770MYB 17464 ENCODE Processing Pipeline 134493d28dfae921598d06bb0ed0a384 https://www.encodeproject.org/files/ENCFF520MMO/@@download/ENCFF520MMO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF670MPE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF796YFZ 126422 ENCODE Processing Pipeline 2dfe23776181ccff8399deea7ff77a7a https://www.encodeproject.org/files/ENCFF670MPE/@@download/ENCFF670MPE.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF191USS bigWig signal p-value ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF410PKI, ENCFF601DDB 199273020 ENCODE Processing Pipeline 755c87cb3f22b8fc0393a4b1acdd4dd5 https://www.encodeproject.org/files/ENCFF191USS/@@download/ENCFF191USS.bigWig hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF506XLF bigBed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF458KOT 10580195 ENCODE Processing Pipeline 7e4c14b9092482933b8c8496b5dfdc11 https://www.encodeproject.org/files/ENCFF506XLF/@@download/ENCFF506XLF.bigBed hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF949OXS bigWig fold change over control ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF410PKI, ENCFF601DDB 181361868 ENCODE Processing Pipeline 41b878fc9680d03287e32fc487b499b1 https://www.encodeproject.org/files/ENCFF949OXS/@@download/ENCFF949OXS.bigWig hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF949JIZ bigWig fold change over control ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF410PKI, ENCFF601DDB, ENCFF950YAN 345249698 ENCODE Processing Pipeline ed37f9e453d5df6c2357494caa926655 https://www.encodeproject.org/files/ENCFF949JIZ/@@download/ENCFF949JIZ.bigWig hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF445NNL bigWig signal p-value ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF410PKI, ENCFF950YAN 202152402 ENCODE Processing Pipeline 26cbc16bb4ffcf2ca67c17954566f658 https://www.encodeproject.org/files/ENCFF445NNL/@@download/ENCFF445NNL.bigWig hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF453YKQ bigWig signal p-value ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF410PKI, ENCFF601DDB, ENCFF950YAN 179228177 ENCODE Processing Pipeline 187b70752a5c1f0697cc6a17cda1e9bd https://www.encodeproject.org/files/ENCFF453YKQ/@@download/ENCFF453YKQ.bigWig hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF996VAQ bigWig fold change over control ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF410PKI, ENCFF950YAN 208972219 ENCODE Processing Pipeline dbc0cdab715e95ed56a8d19049b3d5ba https://www.encodeproject.org/files/ENCFF996VAQ/@@download/ENCFF996VAQ.bigWig hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF644HHB bed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF410PKI, ENCFF601DDB 30829 ENCODE Processing Pipeline 1b27e74260cf0b9b43575bc68ebe9ba8 https://www.encodeproject.org/files/ENCFF644HHB/@@download/ENCFF644HHB.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF639APX bed narrowPeak peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF410PKI, ENCFF950YAN 1333674 ENCODE Processing Pipeline 387e0af54d0a526e1bacee665d50a446 https://www.encodeproject.org/files/ENCFF639APX/@@download/ENCFF639APX.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF269ZSB bed narrowPeak conservative idr thresholded peaks ENCSR000BJJ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF458KOT, ENCFF639APX, ENCFF644HHB 17535 ENCODE Processing Pipeline 35ec3a817849ef96dabf833b6eef7b01 https://www.encodeproject.org/files/ENCFF269ZSB/@@download/ENCFF269ZSB.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000PPA bam alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PPM 742142532 Richard Myers, HAIB 5cf5074e753cffcf8d4659afac0961e1 https://www.encodeproject.org/files/ENCFF000PPA/@@download/ENCFF000PPA.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPB bam alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PPQ 808429180 Richard Myers, HAIB 011ece3ee3d38d8f32e7bb9c1bcac8e2 https://www.encodeproject.org/files/ENCFF000PPB/@@download/ENCFF000PPB.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPD bigBed broadPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHI 340550 Richard Myers, HAIB 98eccfc990582b0b82b253272b7e83bf https://www.encodeproject.org/files/ENCFF000PPD/@@download/ENCFF000PPD.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPE bigBed broadPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHJ 671287 Richard Myers, HAIB a20ba0caabe41d5c16fe863309e7e1e3 https://www.encodeproject.org/files/ENCFF000PPE/@@download/ENCFF000PPE.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPG bigWig raw signal ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 12541362 Richard Myers, HAIB 735a69bf98955aa6d556acd1d29a7a03 https://www.encodeproject.org/files/ENCFF000PPG/@@download/ENCFF000PPG.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000PPH bigWig raw signal ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 35563268 Richard Myers, HAIB 15ae32ce08322b5b6e4166aaa9169c34 https://www.encodeproject.org/files/ENCFF000PPH/@@download/ENCFF000PPH.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000PPM fastq reads ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1034032891 Richard Myers, HAIB c7ac554e436df63f213430706a521aa8 https://www.encodeproject.org/files/ENCFF000PPM/@@download/ENCFF000PPM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPQ fastq reads ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1396879713 Richard Myers, HAIB cc259275d0b9203cd1d22408c88f13ea https://www.encodeproject.org/files/ENCFF000PPQ/@@download/ENCFF000PPQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POH/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF001UHI bed broadPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 159504 Richard Myers, HAIB 72518824716d4948cd0ec3e4c582a385 https://www.encodeproject.org/files/ENCFF001UHI/@@download/ENCFF001UHI.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF001UHJ bed broadPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 406650 Richard Myers, HAIB e811f4a573c6ceafeac9301d5592b86b https://www.encodeproject.org/files/ENCFF001UHJ/@@download/ENCFF001UHJ.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF002CKZ bed narrowPeak optimal idr thresholded peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 378584 ENCODE Consortium Analysis Working Group 664cfd5f0deaa3414bb50c28fe2ec980 https://www.encodeproject.org/files/ENCFF002CKZ/@@download/ENCFF002CKZ.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF166HAS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE ENCFF002CKZ 802797 ENCODE Consortium 34ee2b170c14143b7b3ae5062596d6a8 https://www.encodeproject.org/files/ENCFF166HAS/@@download/ENCFF166HAS.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF990BLX bam unfiltered alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PPM, ENCFF643CGH 1255485246 ENCODE Processing Pipeline d779ae931bed13d718f1ed7b6a77fdb5 https://www.encodeproject.org/files/ENCFF990BLX/@@download/ENCFF990BLX.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF333LDV bam alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PPM, ENCFF643CGH 509766898 ENCODE Processing Pipeline b20c6fb5f5cb5dd71a8a4f12549a7e1e https://www.encodeproject.org/files/ENCFF333LDV/@@download/ENCFF333LDV.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF892EXU bam unfiltered alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PPQ, ENCFF643CGH 1849633762 ENCODE Processing Pipeline b0f2967b50eaa5ae198f7ee71b5b66e7 https://www.encodeproject.org/files/ENCFF892EXU/@@download/ENCFF892EXU.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF199GHD bam alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PPQ, ENCFF643CGH 1036280843 ENCODE Processing Pipeline d8162b11739b12a38c2a9d284d58904c https://www.encodeproject.org/files/ENCFF199GHD/@@download/ENCFF199GHD.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF815HWQ bam unfiltered alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PPM, ENCFF807MUK 1251210703 ENCODE Processing Pipeline 65a7fd366bfbde02fa217e50b8cbbd01 https://www.encodeproject.org/files/ENCFF815HWQ/@@download/ENCFF815HWQ.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF881TVG bam alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PPM, ENCFF807MUK 510268191 ENCODE Processing Pipeline 13d0fa62d53998834f6c1965e151d407 https://www.encodeproject.org/files/ENCFF881TVG/@@download/ENCFF881TVG.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF192KLO bam unfiltered alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PPQ, ENCFF807MUK 1839499206 ENCODE Processing Pipeline 27ff825c1ff6c111635186f9b91cd7aa https://www.encodeproject.org/files/ENCFF192KLO/@@download/ENCFF192KLO.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF300XQD bam alignments ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PPQ, ENCFF807MUK 1037084632 ENCODE Processing Pipeline 3ca78b4b3c3399f14d00d81319467a12 https://www.encodeproject.org/files/ENCFF300XQD/@@download/ENCFF300XQD.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF835BIS bigWig signal p-value ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF333LDV 474966558 ENCODE Processing Pipeline acc6f358e3f0da492598d13f0d1d7bfb https://www.encodeproject.org/files/ENCFF835BIS/@@download/ENCFF835BIS.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF559LIZ bigWig signal p-value ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF199GHD 672658749 ENCODE Processing Pipeline c95039b36b39058c7016edf2b25a8c18 https://www.encodeproject.org/files/ENCFF559LIZ/@@download/ENCFF559LIZ.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF008TRI bigWig signal p-value ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF199GHD, ENCFF333LDV 705389289 ENCODE Processing Pipeline 50e960ef070569ff2d7f59fb8863057f https://www.encodeproject.org/files/ENCFF008TRI/@@download/ENCFF008TRI.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF764PYK bigWig fold change over control ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF333LDV 292741408 ENCODE Processing Pipeline ad1e62bce9d2141d6e55d7597fba6784 https://www.encodeproject.org/files/ENCFF764PYK/@@download/ENCFF764PYK.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF714IJK bigWig fold change over control ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF199GHD 526908425 ENCODE Processing Pipeline 97639c133892aa909453e96fa366f733 https://www.encodeproject.org/files/ENCFF714IJK/@@download/ENCFF714IJK.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF174EJM bigWig fold change over control ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF199GHD, ENCFF333LDV 699282215 ENCODE Processing Pipeline c59eb825a3c9f2f36de901b086b015dc https://www.encodeproject.org/files/ENCFF174EJM/@@download/ENCFF174EJM.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF062HBO bed narrowPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF333LDV 4680336 ENCODE Processing Pipeline 855723d9bb5597f3b7903150282335de https://www.encodeproject.org/files/ENCFF062HBO/@@download/ENCFF062HBO.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF944QJD bed narrowPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF199GHD 5430578 ENCODE Processing Pipeline 01255282514bfdc3a6c29e9683e50150 https://www.encodeproject.org/files/ENCFF944QJD/@@download/ENCFF944QJD.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF376OXL bigBed narrowPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF944QJD 11252048 ENCODE Processing Pipeline f27044af1fb077ab4e52d1b9611c18e3 https://www.encodeproject.org/files/ENCFF376OXL/@@download/ENCFF376OXL.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF318HTQ bigBed narrowPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF702PPD 11407604 ENCODE Processing Pipeline 8ac6c9864defe6bf2da6f711b997d138 https://www.encodeproject.org/files/ENCFF318HTQ/@@download/ENCFF318HTQ.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF141JYN bed narrowPeak conservative idr thresholded peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF062HBO, ENCFF419RSJ, ENCFF702PPD, ENCFF944QJD 205705 ENCODE Processing Pipeline bfb68048658856898e454bdae4c43192 https://www.encodeproject.org/files/ENCFF141JYN/@@download/ENCFF141JYN.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF257ERZ bigBed narrowPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF062HBO 10874242 ENCODE Processing Pipeline 033666cbd94e9da77e5f5368dd2d326e https://www.encodeproject.org/files/ENCFF257ERZ/@@download/ENCFF257ERZ.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF171MQS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF141JYN 435489 ENCODE Processing Pipeline b19f936e6ae0fa53ebd435e9d11fab06 https://www.encodeproject.org/files/ENCFF171MQS/@@download/ENCFF171MQS.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF702PPD bed narrowPeak peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF199GHD, ENCFF333LDV 5887854 ENCODE Processing Pipeline 726431d10d2e9e072d654e2a76bcf869 https://www.encodeproject.org/files/ENCFF702PPD/@@download/ENCFF702PPD.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF105TFM bed narrowPeak optimal idr thresholded peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF062HBO, ENCFF419RSJ, ENCFF702PPD, ENCFF944QJD 433780 ENCODE Processing Pipeline 438b625ba5eff85195b33b51c82ec7fc https://www.encodeproject.org/files/ENCFF105TFM/@@download/ENCFF105TFM.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF740NNN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105TFM 748888 ENCODE Processing Pipeline 18c9b091bd46e7628b57fe4e1d411910 https://www.encodeproject.org/files/ENCFF740NNN/@@download/ENCFF740NNN.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF846BTF fastq reads ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF133IBS 1296046548 Richard Myers, HAIB 50de1099f54ab41ee1b3d13e9c045ecd SRA:SRR6213225 https://www.encodeproject.org/files/ENCFF846BTF/@@download/ENCFF846BTF.fastq.gz HiSeq 2000 /files/ENCFF939CSH/ released antibody characterized with exemption, low read depth ENCFF133IBS fastq reads ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF846BTF 1269460468 Richard Myers, HAIB 75457cdce544fa33ba5cf651d3a0e69c SRA:SRR6213225 https://www.encodeproject.org/files/ENCFF133IBS/@@download/ENCFF133IBS.fastq.gz HiSeq 2000 /files/ENCFF141WOU/ released antibody characterized with exemption, low read depth ENCFF827JFW bam unfiltered alignments ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF133IBS, ENCFF807MUK, ENCFF846BTF 3158572201 ENCODE Processing Pipeline 4085e4344bab279967e6c8593a9426c8 https://www.encodeproject.org/files/ENCFF827JFW/@@download/ENCFF827JFW.bam hg19 released antibody characterized with exemption, low read depth ENCFF329BOB bam unfiltered alignments ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF133IBS, ENCFF643CGH, ENCFF846BTF 3170717243 ENCODE Processing Pipeline c744ed65e686873c051d04a816689066 https://www.encodeproject.org/files/ENCFF329BOB/@@download/ENCFF329BOB.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF527RBK bam alignments ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF133IBS, ENCFF643CGH, ENCFF846BTF 2447866623 ENCODE Processing Pipeline 55cb02bcd104d8000978e037c4b4ad71 https://www.encodeproject.org/files/ENCFF527RBK/@@download/ENCFF527RBK.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF726KOK bam alignments ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF133IBS, ENCFF807MUK, ENCFF846BTF 2446585181 ENCODE Processing Pipeline b9efae8e1e18f10f12b971992b651436 https://www.encodeproject.org/files/ENCFF726KOK/@@download/ENCFF726KOK.bam hg19 released antibody characterized with exemption, low read depth ENCFF844FEO bigWig signal p-value ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF527RBK 1074767011 ENCODE Processing Pipeline f7e261b8d0f51bfc56fd26e7e9a3a850 https://www.encodeproject.org/files/ENCFF844FEO/@@download/ENCFF844FEO.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF305XIN bigWig fold change over control ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF527RBK 996326495 ENCODE Processing Pipeline f6c8e9689e07c7c56db9977a01e0bdfb https://www.encodeproject.org/files/ENCFF305XIN/@@download/ENCFF305XIN.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF495JYR bed narrowPeak peaks ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF527RBK 5521388 ENCODE Processing Pipeline 972cecb75a3a1f117d54988233fbcebd https://www.encodeproject.org/files/ENCFF495JYR/@@download/ENCFF495JYR.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF943IGX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF244FQD 384930 ENCODE Processing Pipeline 2808f05f9eef91f716ef6d57307372b2 https://www.encodeproject.org/files/ENCFF943IGX/@@download/ENCFF943IGX.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF689HEP bigBed narrowPeak peaks ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF495JYR 11789551 ENCODE Processing Pipeline 41b4413ca8adf9122413eca84770c727 https://www.encodeproject.org/files/ENCFF689HEP/@@download/ENCFF689HEP.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF244FQD bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF495JYR 177250 ENCODE Processing Pipeline bd428621998ff39a5315959379847fe1 https://www.encodeproject.org/files/ENCFF244FQD/@@download/ENCFF244FQD.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF200AGB bigWig signal p-value ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF726KOK 1078352793 ENCODE Processing Pipeline 3f6f899cf82ad185235d445a1d57d03a https://www.encodeproject.org/files/ENCFF200AGB/@@download/ENCFF200AGB.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF348UUV bigWig fold change over control ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF726KOK 995141249 ENCODE Processing Pipeline 3bb7a3542418ef54e2cda3ac014f4fdc https://www.encodeproject.org/files/ENCFF348UUV/@@download/ENCFF348UUV.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF035UIJ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF913GNW 179206 ENCODE Processing Pipeline 7e56ef87beacb49cb8540f6f23299f85 https://www.encodeproject.org/files/ENCFF035UIJ/@@download/ENCFF035UIJ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF997RBH bigBed narrowPeak peaks ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF913GNW 11778787 ENCODE Processing Pipeline 489b69ee08ba9bb79b1d1b95c58de95a https://www.encodeproject.org/files/ENCFF997RBH/@@download/ENCFF997RBH.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF376ZIE bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF035UIJ 384875 ENCODE Processing Pipeline a428a268ec1ff8444aaba1f846ce6b15 https://www.encodeproject.org/files/ENCFF376ZIE/@@download/ENCFF376ZIE.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF913GNW bed narrowPeak peaks ENCSR429JTR ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF726KOK 5526232 ENCODE Processing Pipeline 30e19fa28b5af368754c5bc6f9a9905e https://www.encodeproject.org/files/ENCFF913GNW/@@download/ENCFF913GNW.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF000OLV bam alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OMI 678060709 Richard Myers, HAIB afd6a654f43dfd9b0d657595b26f1a05 https://www.encodeproject.org/files/ENCFF000OLV/@@download/ENCFF000OLV.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OLX bam alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OML 1078621506 Richard Myers, HAIB d6d22c7d204744d101f02e1c49a4f5a3 https://www.encodeproject.org/files/ENCFF000OLX/@@download/ENCFF000OLX.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OLY bigBed broadPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAQ 659118 Richard Myers, HAIB e50586b6e85c3e370cc627e3bab1b75c https://www.encodeproject.org/files/ENCFF000OLY/@@download/ENCFF000OLY.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OMA bigBed broadPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAR 287912 Richard Myers, HAIB bbb6b1d16a19fcf308cc7ba8dd8d5015 https://www.encodeproject.org/files/ENCFF000OMA/@@download/ENCFF000OMA.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OMB bigWig raw signal ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 19984713 Richard Myers, HAIB be559800c81fade35dc27e8680c55abb https://www.encodeproject.org/files/ENCFF000OMB/@@download/ENCFF000OMB.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OMC bigWig raw signal ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 16544195 Richard Myers, HAIB 1aad9f295b4c37af2e85caca86d128cb https://www.encodeproject.org/files/ENCFF000OMC/@@download/ENCFF000OMC.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OMI fastq reads ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 632017699 Richard Myers, HAIB 0f1d1e80e65c08f43f98eee6042e7d5b https://www.encodeproject.org/files/ENCFF000OMI/@@download/ENCFF000OMI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLS/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OML fastq reads ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 947630020 Richard Myers, HAIB 3fd125abdf21254c0d70f8b8a74eaff7 https://www.encodeproject.org/files/ENCFF000OML/@@download/ENCFF000OML.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLS/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UAQ bed broadPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 431082 Richard Myers, HAIB 00aad22ea19890ccb9145619a22608fc https://www.encodeproject.org/files/ENCFF001UAQ/@@download/ENCFF001UAQ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UAR bed broadPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 166204 Richard Myers, HAIB 6eca10344705d0aa7eacb561fa35fcd7 https://www.encodeproject.org/files/ENCFF001UAR/@@download/ENCFF001UAR.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CIQ bed narrowPeak optimal idr thresholded peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 314930 ENCODE Consortium Analysis Working Group 2e6452116f6209adbe07483c03da261b https://www.encodeproject.org/files/ENCFF002CIQ/@@download/ENCFF002CIQ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF015WVO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE ENCFF002CIQ 742894 ENCODE Consortium 7320f7ec08c5dcb5ac36e0f7bbd42439 https://www.encodeproject.org/files/ENCFF015WVO/@@download/ENCFF015WVO.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF981GSU bam alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMI, ENCFF643CGH 447846038 ENCODE Processing Pipeline 66ab8ba1153416e8a6dd52ace05d14c6 https://www.encodeproject.org/files/ENCFF981GSU/@@download/ENCFF981GSU.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF782ISX bam unfiltered alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMI, ENCFF643CGH 814508154 ENCODE Processing Pipeline c4cf2118b86e2fbf97fcd21869092848 https://www.encodeproject.org/files/ENCFF782ISX/@@download/ENCFF782ISX.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF627UME bam alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OML, ENCFF643CGH 788083385 ENCODE Processing Pipeline e6322fc82d8523e7035a6394f4b55e56 https://www.encodeproject.org/files/ENCFF627UME/@@download/ENCFF627UME.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF297QAP bam unfiltered alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OML, ENCFF643CGH 1263229469 ENCODE Processing Pipeline 887a2afec60f39a1ccf99dbbbf8ef7da https://www.encodeproject.org/files/ENCFF297QAP/@@download/ENCFF297QAP.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF208PVV bam unfiltered alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMI, ENCFF807MUK 817068983 ENCODE Processing Pipeline e126baf9ae46021c5dc26860dbd5ab28 https://www.encodeproject.org/files/ENCFF208PVV/@@download/ENCFF208PVV.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF632AHN bam alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMI, ENCFF807MUK 442840254 ENCODE Processing Pipeline db692737fbbc25269e563b9f8ef850f6 https://www.encodeproject.org/files/ENCFF632AHN/@@download/ENCFF632AHN.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF951SLF bam unfiltered alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OML, ENCFF807MUK 1259991430 ENCODE Processing Pipeline 22b7497b20dfdada5822f69ff395359b https://www.encodeproject.org/files/ENCFF951SLF/@@download/ENCFF951SLF.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF790IAM bam alignments ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OML, ENCFF807MUK 785178821 ENCODE Processing Pipeline 61eb4b6269d6b4526cf1da709fcebd83 https://www.encodeproject.org/files/ENCFF790IAM/@@download/ENCFF790IAM.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF965OZC bigWig signal p-value ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF827ILE, ENCFF981GSU 470044095 ENCODE Processing Pipeline f71c3c293e4cf903d0e29dec9227956e https://www.encodeproject.org/files/ENCFF965OZC/@@download/ENCFF965OZC.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF329SEO bigWig signal p-value ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF627UME, ENCFF827ILE, ENCFF981GSU 678442705 ENCODE Processing Pipeline f820e7de0ff7e81efab542c13975e446 https://www.encodeproject.org/files/ENCFF329SEO/@@download/ENCFF329SEO.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF212UBM bigWig fold change over control ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF627UME, ENCFF827ILE 459002001 ENCODE Processing Pipeline 19fc4147765e9552b88e31f29fe76209 https://www.encodeproject.org/files/ENCFF212UBM/@@download/ENCFF212UBM.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF236HJF bigWig signal p-value ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF627UME, ENCFF827ILE 503824336 ENCODE Processing Pipeline 814c1cab4d26a7f76d9a7559e46d39a7 https://www.encodeproject.org/files/ENCFF236HJF/@@download/ENCFF236HJF.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF895YUC bigWig fold change over control ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF627UME, ENCFF827ILE, ENCFF981GSU 623140935 ENCODE Processing Pipeline 7eccf118221a51d10bac315e9bf7e3d5 https://www.encodeproject.org/files/ENCFF895YUC/@@download/ENCFF895YUC.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF610ZYL bed narrowPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF827ILE, ENCFF981GSU 5407053 ENCODE Processing Pipeline ba81498ec6e8073a8be94ab80f6e955f https://www.encodeproject.org/files/ENCFF610ZYL/@@download/ENCFF610ZYL.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF638LMU bed narrowPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF627UME, ENCFF827ILE 4877791 ENCODE Processing Pipeline 166ffafd58d3f68bbf8cc8fd0161f639 https://www.encodeproject.org/files/ENCFF638LMU/@@download/ENCFF638LMU.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF314DZW bigWig fold change over control ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF827ILE, ENCFF981GSU 275899101 ENCODE Processing Pipeline 46a7799dcc77954e18b2e6066f38d047 https://www.encodeproject.org/files/ENCFF314DZW/@@download/ENCFF314DZW.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF296TQE bigBed narrowPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF610ZYL 12950048 ENCODE Processing Pipeline 0d6d2f280e14215d075ddb8b9578c159 https://www.encodeproject.org/files/ENCFF296TQE/@@download/ENCFF296TQE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF481SOW bigBed narrowPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF638LMU 11107722 ENCODE Processing Pipeline 65a2ca094f3c98931ef3429467c221d2 https://www.encodeproject.org/files/ENCFF481SOW/@@download/ENCFF481SOW.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF726HLR bigBed narrowPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF170YHF 13501099 ENCODE Processing Pipeline 9ed1ec28cc324cbceb2abf52da7b3942 https://www.encodeproject.org/files/ENCFF726HLR/@@download/ENCFF726HLR.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF072IHJ bed narrowPeak optimal idr thresholded peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF170YHF, ENCFF419RSJ, ENCFF610ZYL, ENCFF638LMU 355167 ENCODE Processing Pipeline 6fa9471ae4d4ed4de71b3172b83c4efa https://www.encodeproject.org/files/ENCFF072IHJ/@@download/ENCFF072IHJ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF170YHF bed narrowPeak peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF627UME, ENCFF827ILE, ENCFF981GSU 5969514 ENCODE Processing Pipeline e8b19cfd9005438036c747e6d8acc406 https://www.encodeproject.org/files/ENCFF170YHF/@@download/ENCFF170YHF.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF571RHI bed narrowPeak conservative idr thresholded peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF170YHF, ENCFF419RSJ, ENCFF610ZYL, ENCFF638LMU 204024 ENCODE Processing Pipeline 03f90a29f34b578a33dc2b34211f7a89 https://www.encodeproject.org/files/ENCFF571RHI/@@download/ENCFF571RHI.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF668SIE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF571RHI 447180 ENCODE Processing Pipeline 4f7917622eb6f54a14ba1742d6b78ae2 https://www.encodeproject.org/files/ENCFF668SIE/@@download/ENCFF668SIE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF625DJK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLT ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF072IHJ 655315 ENCODE Processing Pipeline 5142189c774fdbbfaa552c492b513d7d https://www.encodeproject.org/files/ENCFF625DJK/@@download/ENCFF625DJK.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OWU bam alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000OXD 1414523695 Richard Myers, HAIB bd4ed318a05df207b342464185fdefa1 https://www.encodeproject.org/files/ENCFF000OWU/@@download/ENCFF000OWU.bam hg19 archived biological replicates with identical biosample ENCFF000OWV bam alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000OXG 1706200394 Richard Myers, HAIB 0c1ed93078348e4c4cf43b617fea050b https://www.encodeproject.org/files/ENCFF000OWV/@@download/ENCFF000OWV.bam hg19 archived biological replicates with identical biosample ENCFF000OWW bigBed broadPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UDG 1567483 Richard Myers, HAIB 37b562d4f717a707ce5a36d4ba92e928 https://www.encodeproject.org/files/ENCFF000OWW/@@download/ENCFF000OWW.bigBed hg19 archived biological replicates with identical biosample ENCFF000OWX bigBed broadPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UDH 1609320 Richard Myers, HAIB 104f0a8b99be21a69648400369858c61 https://www.encodeproject.org/files/ENCFF000OWX/@@download/ENCFF000OWX.bigBed hg19 archived biological replicates with identical biosample ENCFF000OWY bigWig raw signal ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 1 229230140 Richard Myers, HAIB b58c57ca95f992e52f2bbb8e91026cf9 https://www.encodeproject.org/files/ENCFF000OWY/@@download/ENCFF000OWY.bigWig hg19 archived missing derived_from, biological replicates with identical biosample ENCFF000OXA bigWig raw signal ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 1 195342328 Richard Myers, HAIB d8c5a2fb03186806d90728986e07b12c https://www.encodeproject.org/files/ENCFF000OXA/@@download/ENCFF000OXA.bigWig hg19 archived missing derived_from, biological replicates with identical biosample ENCFF000OXD fastq reads ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1483400497 Richard Myers, HAIB e5ded8d06129e09aee30fc0f47832484 https://www.encodeproject.org/files/ENCFF000OXD/@@download/ENCFF000OXD.fastq.gz HiSeq 2000 /files/ENCFF000OXQ/ released biological replicates with identical biosample ENCFF000OXG fastq reads ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1786999237 Richard Myers, HAIB 303c85408434fde009bfbce24716263c https://www.encodeproject.org/files/ENCFF000OXG/@@download/ENCFF000OXG.fastq.gz HiSeq 2000 /files/ENCFF000OXP/ released biological replicates with identical biosample ENCFF001UDG bed broadPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 1 864456 Richard Myers, HAIB 09514841a227917d51412b02a0f67f82 https://www.encodeproject.org/files/ENCFF001UDG/@@download/ENCFF001UDG.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample ENCFF001UDH bed broadPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 1 891458 Richard Myers, HAIB 9b164fd77c97aeeebddd239551d61005 https://www.encodeproject.org/files/ENCFF001UDH/@@download/ENCFF001UDH.bed.gz hg19 archived missing derived_from, biological replicates with identical biosample ENCFF536VAX bam alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000OXD, ENCFF807MUK 1155622382 ENCODE Processing Pipeline 9ba6810302c6c86160d3ea953ef3a360 https://www.encodeproject.org/files/ENCFF536VAX/@@download/ENCFF536VAX.bam hg19 released biological replicates with identical biosample ENCFF402LCR bam unfiltered alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000OXD, ENCFF643CGH 1509322002 ENCODE Processing Pipeline 6f11498b8a2cf81a1515c4c33d010e93 https://www.encodeproject.org/files/ENCFF402LCR/@@download/ENCFF402LCR.bam GRCh38 released biological replicates with identical biosample ENCFF709AFO bam unfiltered alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000OXG, ENCFF643CGH 1829547199 ENCODE Processing Pipeline ff5ccd7be9a8695967288b0e583826d4 https://www.encodeproject.org/files/ENCFF709AFO/@@download/ENCFF709AFO.bam GRCh38 released biological replicates with identical biosample ENCFF949NKN bam unfiltered alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000OXD, ENCFF807MUK 1507576416 ENCODE Processing Pipeline 75a7ff2bea3a78a5eef01170ad2ba658 https://www.encodeproject.org/files/ENCFF949NKN/@@download/ENCFF949NKN.bam hg19 released biological replicates with identical biosample ENCFF184YRD bam unfiltered alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000OXG, ENCFF807MUK 1827105298 ENCODE Processing Pipeline 950e64b4009e1b7844aa4c16ab50f512 https://www.encodeproject.org/files/ENCFF184YRD/@@download/ENCFF184YRD.bam hg19 released biological replicates with identical biosample ENCFF319TCF bam alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000OXD, ENCFF643CGH 1155405653 ENCODE Processing Pipeline 1ffaf62e02d79070e7341d1113e0bf2a https://www.encodeproject.org/files/ENCFF319TCF/@@download/ENCFF319TCF.bam GRCh38 released biological replicates with identical biosample ENCFF712GSG bam alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000OXG, ENCFF807MUK 1405841745 ENCODE Processing Pipeline 5b2536dde1857ec292a54984f7d20184 https://www.encodeproject.org/files/ENCFF712GSG/@@download/ENCFF712GSG.bam hg19 released biological replicates with identical biosample ENCFF372IRO bam alignments ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000OXG, ENCFF643CGH 1405544549 ENCODE Processing Pipeline 1eaa3b39bb0e72f314493ac0a9e0eca4 https://www.encodeproject.org/files/ENCFF372IRO/@@download/ENCFF372IRO.bam GRCh38 released biological replicates with identical biosample ENCFF187WWV bigWig fold change over control ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF549XKN, ENCFF638ZDZ, ENCFF712GSG 575047536 ENCODE Processing Pipeline 058dbf7b00e60403f86f4a0ad3d9fb25 https://www.encodeproject.org/files/ENCFF187WWV/@@download/ENCFF187WWV.bigWig hg19 released biological replicates with identical biosample ENCFF936MWV bed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF536VAX, ENCFF549XKN, ENCFF638ZDZ, ENCFF712GSG 6950213 ENCODE Processing Pipeline 6321b3dd7930582c5180a6ed426c46fe https://www.encodeproject.org/files/ENCFF936MWV/@@download/ENCFF936MWV.bed.gz hg19 released biological replicates with identical biosample ENCFF794EOZ bigBed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF666HPI 13258947 ENCODE Processing Pipeline 00e29cab9eb1bf899d7381d00350ca27 https://www.encodeproject.org/files/ENCFF794EOZ/@@download/ENCFF794EOZ.bigBed hg19 released biological replicates with identical biosample ENCFF526ROQ bigBed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF813QDL 13301962 ENCODE Processing Pipeline 7b40865d01bd98769d0423e44a0d1874 https://www.encodeproject.org/files/ENCFF526ROQ/@@download/ENCFF526ROQ.bigBed hg19 released biological replicates with identical biosample ENCFF653EXO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF411LEJ 1353779 ENCODE Processing Pipeline 593458668dcdb32ca38370179b7f8443 https://www.encodeproject.org/files/ENCFF653EXO/@@download/ENCFF653EXO.bigBed hg19 released biological replicates with identical biosample ENCFF885AHU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF450AEF 1890537 ENCODE Processing Pipeline eacd27b3b19fad49e64e043d5009b3e2 https://www.encodeproject.org/files/ENCFF885AHU/@@download/ENCFF885AHU.bigBed hg19 released biological replicates with identical biosample ENCFF594WLP bigWig signal p-value ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF536VAX, ENCFF549XKN, ENCFF638ZDZ, ENCFF712GSG 1021626420 ENCODE Processing Pipeline 94244481f690fb2ffae3f528f864f6ab https://www.encodeproject.org/files/ENCFF594WLP/@@download/ENCFF594WLP.bigWig hg19 released biological replicates with identical biosample ENCFF487ITT bigWig fold change over control ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF536VAX, ENCFF549XKN, ENCFF638ZDZ, ENCFF712GSG 869659501 ENCODE Processing Pipeline 72d4905f87152fd88bcc1392257f1a1c https://www.encodeproject.org/files/ENCFF487ITT/@@download/ENCFF487ITT.bigWig hg19 released biological replicates with identical biosample ENCFF666HPI bed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF536VAX, ENCFF549XKN, ENCFF638ZDZ 6366854 ENCODE Processing Pipeline 94a2d4a11337fcc5323421521394cb4b https://www.encodeproject.org/files/ENCFF666HPI/@@download/ENCFF666HPI.bed.gz hg19 released biological replicates with identical biosample ENCFF813QDL bed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF549XKN, ENCFF638ZDZ, ENCFF712GSG 6690166 ENCODE Processing Pipeline efbfbc0674eba9f54bf91b7305c189f4 https://www.encodeproject.org/files/ENCFF813QDL/@@download/ENCFF813QDL.bed.gz hg19 released biological replicates with identical biosample ENCFF450AEF bed narrowPeak optimal idr thresholded peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF666HPI, ENCFF813QDL, ENCFF936MWV 909701 ENCODE Processing Pipeline fca497b5804264f255cbb22e52ba9c93 https://www.encodeproject.org/files/ENCFF450AEF/@@download/ENCFF450AEF.bed.gz hg19 released biological replicates with identical biosample ENCFF463ACB bigWig signal p-value ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF549XKN, ENCFF638ZDZ, ENCFF712GSG 834382883 ENCODE Processing Pipeline 305db2a5217e279c18e6c219fd68a1dd https://www.encodeproject.org/files/ENCFF463ACB/@@download/ENCFF463ACB.bigWig hg19 released biological replicates with identical biosample ENCFF598RRZ bigWig signal p-value ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF536VAX, ENCFF549XKN, ENCFF638ZDZ 780885080 ENCODE Processing Pipeline bfecb29c07e8719feb63ba394730c11f https://www.encodeproject.org/files/ENCFF598RRZ/@@download/ENCFF598RRZ.bigWig hg19 released biological replicates with identical biosample ENCFF928JCP bigWig fold change over control ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF536VAX, ENCFF549XKN, ENCFF638ZDZ 480062686 ENCODE Processing Pipeline be5e62f6c4368295845a226ca857a306 https://www.encodeproject.org/files/ENCFF928JCP/@@download/ENCFF928JCP.bigWig hg19 released biological replicates with identical biosample ENCFF957MAB bigBed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF936MWV 13419117 ENCODE Processing Pipeline 7ed040ee5578f842b0d0cb97a6e9ea9c https://www.encodeproject.org/files/ENCFF957MAB/@@download/ENCFF957MAB.bigBed hg19 released biological replicates with identical biosample ENCFF411LEJ bed narrowPeak conservative idr thresholded peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF666HPI, ENCFF813QDL, ENCFF936MWV 815935 ENCODE Processing Pipeline 4aaa275dc8af52d4925e6080cae466ad https://www.encodeproject.org/files/ENCFF411LEJ/@@download/ENCFF411LEJ.bed.gz hg19 released biological replicates with identical biosample ENCFF073DFV bigWig signal p-value ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF372IRO, ENCFF495JTQ, ENCFF599OHS 826204535 ENCODE Processing Pipeline 03d89356ad6ed16a3ad5735daa45ea76 https://www.encodeproject.org/files/ENCFF073DFV/@@download/ENCFF073DFV.bigWig GRCh38 released biological replicates with identical biosample ENCFF869DUN bigWig signal p-value ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF319TCF, ENCFF495JTQ, ENCFF599OHS 776428941 ENCODE Processing Pipeline 2d947b380960786385b84270e1ca56d6 https://www.encodeproject.org/files/ENCFF869DUN/@@download/ENCFF869DUN.bigWig GRCh38 released biological replicates with identical biosample ENCFF443HSG bigWig fold change over control ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF319TCF, ENCFF372IRO, ENCFF495JTQ, ENCFF599OHS 871207006 ENCODE Processing Pipeline 61d35b8352b2aa4b353120821e8e4fcd https://www.encodeproject.org/files/ENCFF443HSG/@@download/ENCFF443HSG.bigWig GRCh38 released biological replicates with identical biosample ENCFF966TRM bigWig signal p-value ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF319TCF, ENCFF372IRO, ENCFF495JTQ, ENCFF599OHS 853842137 ENCODE Processing Pipeline d7b6cf50c358b0782bfa62c056dd8180 https://www.encodeproject.org/files/ENCFF966TRM/@@download/ENCFF966TRM.bigWig GRCh38 released biological replicates with identical biosample ENCFF847XYX bed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF319TCF, ENCFF495JTQ, ENCFF599OHS 6365925 ENCODE Processing Pipeline 1fb1f7eec48076b46e6329d53d9d2603 https://www.encodeproject.org/files/ENCFF847XYX/@@download/ENCFF847XYX.bed.gz GRCh38 released biological replicates with identical biosample ENCFF341YXD bigBed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF847XYX 13256846 ENCODE Processing Pipeline a1a864ee5d9f11c687a57635adc7d362 https://www.encodeproject.org/files/ENCFF341YXD/@@download/ENCFF341YXD.bigBed GRCh38 released biological replicates with identical biosample ENCFF996MRE bed narrowPeak conservative idr thresholded peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF118XHY, ENCFF419RSJ, ENCFF744MES, ENCFF847XYX 815779 ENCODE Processing Pipeline 4da7f790d9af61c020bfd0edb86269a9 https://www.encodeproject.org/files/ENCFF996MRE/@@download/ENCFF996MRE.bed.gz GRCh38 released biological replicates with identical biosample ENCFF242OFV bigWig fold change over control ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF319TCF, ENCFF495JTQ, ENCFF599OHS 478957363 ENCODE Processing Pipeline 1b0bfefd11560201b61d61d8dd28d7a3 https://www.encodeproject.org/files/ENCFF242OFV/@@download/ENCFF242OFV.bigWig GRCh38 released biological replicates with identical biosample ENCFF615QML bigBed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF118XHY 13420520 ENCODE Processing Pipeline 6db1fed30db7db98fd9702119bc0722e https://www.encodeproject.org/files/ENCFF615QML/@@download/ENCFF615QML.bigBed GRCh38 released biological replicates with identical biosample ENCFF850TQR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF996MRE 1355112 ENCODE Processing Pipeline 5a3f0a339510f35507e09e381027da9a https://www.encodeproject.org/files/ENCFF850TQR/@@download/ENCFF850TQR.bigBed GRCh38 released biological replicates with identical biosample ENCFF801OJA bigWig fold change over control ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF372IRO, ENCFF495JTQ, ENCFF599OHS 574489543 ENCODE Processing Pipeline 3039722eef35360e3291de0ca2fb56c5 https://www.encodeproject.org/files/ENCFF801OJA/@@download/ENCFF801OJA.bigWig GRCh38 released biological replicates with identical biosample ENCFF744MES bed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF372IRO, ENCFF495JTQ, ENCFF599OHS 6654085 ENCODE Processing Pipeline 57d5465bfeec77b0b3a278c59d14d32a https://www.encodeproject.org/files/ENCFF744MES/@@download/ENCFF744MES.bed.gz GRCh38 released biological replicates with identical biosample ENCFF376LUT bigBed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF744MES 13259993 ENCODE Processing Pipeline 6a56a5ce58dbb5a5c26c6ccf030537ac https://www.encodeproject.org/files/ENCFF376LUT/@@download/ENCFF376LUT.bigBed GRCh38 released biological replicates with identical biosample ENCFF118XHY bed narrowPeak peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF319TCF, ENCFF372IRO, ENCFF495JTQ, ENCFF599OHS 6949851 ENCODE Processing Pipeline 34035c75f6d9c81748c374c1bee9b315 https://www.encodeproject.org/files/ENCFF118XHY/@@download/ENCFF118XHY.bed.gz GRCh38 released biological replicates with identical biosample ENCFF322KPG bed narrowPeak optimal idr thresholded peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF118XHY, ENCFF419RSJ, ENCFF744MES, ENCFF847XYX 908498 ENCODE Processing Pipeline 750a6bb0aeb0963ca59e5e2e9e84ad18 https://www.encodeproject.org/files/ENCFF322KPG/@@download/ENCFF322KPG.bed.gz GRCh38 released biological replicates with identical biosample ENCFF547DYL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BTW ChIP-seq CL:0002319 neural cell in vitro differentiated cells embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF322KPG 1889608 ENCODE Processing Pipeline b25a182c04b058ed8af6117ae9edd30e https://www.encodeproject.org/files/ENCFF547DYL/@@download/ENCFF547DYL.bigBed GRCh38 released biological replicates with identical biosample ENCFF000OFT bam alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OGC 1113241566 Richard Myers, HAIB 3abdba81426ae52373a6c75b95339d59 https://www.encodeproject.org/files/ENCFF000OFT/@@download/ENCFF000OFT.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OFU bigBed broadPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZG 335763 Richard Myers, HAIB 7ee513aed7ebf3a90050f6ae71aad02e https://www.encodeproject.org/files/ENCFF000OFU/@@download/ENCFF000OFU.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OFV bigBed broadPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZH 473452 Richard Myers, HAIB 953ae2c9c438f5d9030945de592d71e1 https://www.encodeproject.org/files/ENCFF000OFV/@@download/ENCFF000OFV.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OFW bam alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OGH 1284608236 Richard Myers, HAIB 52cdb4c4f095cfeb6e9d63502c07b590 https://www.encodeproject.org/files/ENCFF000OFW/@@download/ENCFF000OFW.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OFX bigWig raw signal ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 12071535 Richard Myers, HAIB b6c7aa2696639601db574251ef48dee4 https://www.encodeproject.org/files/ENCFF000OFX/@@download/ENCFF000OFX.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OFZ bigWig raw signal ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 23907801 Richard Myers, HAIB 3da2acceb89c76e619cd2207c1ab0abb https://www.encodeproject.org/files/ENCFF000OFZ/@@download/ENCFF000OFZ.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OGC fastq reads ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 753030876 Richard Myers, HAIB 29a0cf661050a49283a6613cc2208469 https://www.encodeproject.org/files/ENCFF000OGC/@@download/ENCFF000OGC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OGH fastq reads ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1022932272 Richard Myers, HAIB 49c307b2f0e07072aee60541e02142f4 https://www.encodeproject.org/files/ENCFF000OGH/@@download/ENCFF000OGH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TZG bed broadPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 149523 Richard Myers, HAIB 8e5843c97332009af35bd817479019f6 https://www.encodeproject.org/files/ENCFF001TZG/@@download/ENCFF001TZG.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TZH bed broadPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 280865 Richard Myers, HAIB eeb7161043b1b3673aeda69cac596e5d https://www.encodeproject.org/files/ENCFF001TZH/@@download/ENCFF001TZH.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CHY bed narrowPeak optimal idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 282154 ENCODE Consortium Analysis Working Group f6ea8668fc006929a00e08ac85165285 https://www.encodeproject.org/files/ENCFF002CHY/@@download/ENCFF002CHY.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF280GJO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE ENCFF002CHY 661822 ENCODE Consortium 1f9897e64080715fa6e3eecf6cf0fa1b https://www.encodeproject.org/files/ENCFF280GJO/@@download/ENCFF280GJO.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF412ZRB bam unfiltered alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OGC, ENCFF643CGH 970919450 ENCODE Processing Pipeline 8c490b2698707cb8fef89b72e2c6a87b https://www.encodeproject.org/files/ENCFF412ZRB/@@download/ENCFF412ZRB.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF575GRT bam alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OGC, ENCFF643CGH 566838088 ENCODE Processing Pipeline 8265b1603a327623600cae1fdc4919df https://www.encodeproject.org/files/ENCFF575GRT/@@download/ENCFF575GRT.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF985XWE bam unfiltered alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OGH, ENCFF643CGH 1345408269 ENCODE Processing Pipeline f2c6e19143141b0c726a38d1dc07e0d9 https://www.encodeproject.org/files/ENCFF985XWE/@@download/ENCFF985XWE.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF177XDM bam alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OGH, ENCFF643CGH 743430394 ENCODE Processing Pipeline 49149538d294da437dad4845ceb2fd06 https://www.encodeproject.org/files/ENCFF177XDM/@@download/ENCFF177XDM.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF686PRS bam unfiltered alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OGC, ENCFF807MUK 967819421 ENCODE Processing Pipeline a0c934b43c13f53a027a0a4cfa7b8159 https://www.encodeproject.org/files/ENCFF686PRS/@@download/ENCFF686PRS.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF305OWM bam alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OGC, ENCFF807MUK 563659161 ENCODE Processing Pipeline 122c8c7bc37b5e9c41417be5f1c8ec3c https://www.encodeproject.org/files/ENCFF305OWM/@@download/ENCFF305OWM.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF097OFH bam unfiltered alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OGH, ENCFF807MUK 1340962166 ENCODE Processing Pipeline 3358765c2885d5589e9ccd4586c34eb3 https://www.encodeproject.org/files/ENCFF097OFH/@@download/ENCFF097OFH.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF388CVC bam alignments ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OGH, ENCFF807MUK 738021623 ENCODE Processing Pipeline 2015c068fc357c88d41fc60b8f26ec7f https://www.encodeproject.org/files/ENCFF388CVC/@@download/ENCFF388CVC.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF182KYZ bigWig fold change over control ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF575GRT 255061285 ENCODE Processing Pipeline 07a84ee5b3faa66d74a9bce1530f7790 https://www.encodeproject.org/files/ENCFF182KYZ/@@download/ENCFF182KYZ.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF105MPH bigWig fold change over control ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF177XDM, ENCFF562HPN, ENCFF575GRT 537222156 ENCODE Processing Pipeline 75f57d84518677ed13764334c344cd95 https://www.encodeproject.org/files/ENCFF105MPH/@@download/ENCFF105MPH.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF951TSS bed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF177XDM, ENCFF562HPN 4860295 ENCODE Processing Pipeline 0378174572aa280080c8fbebade0f3d0 https://www.encodeproject.org/files/ENCFF951TSS/@@download/ENCFF951TSS.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF071CCU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF767OVB 495252 ENCODE Processing Pipeline 75d075baff1bfc5b03c58c4912a0af09 https://www.encodeproject.org/files/ENCFF071CCU/@@download/ENCFF071CCU.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF041HHH bigWig signal p-value ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF177XDM, ENCFF562HPN, ENCFF575GRT 590037029 ENCODE Processing Pipeline c05b363b1f84473ce4072cfcb1913ba8 https://www.encodeproject.org/files/ENCFF041HHH/@@download/ENCFF041HHH.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF182UOW bigBed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF500MWL 11270426 ENCODE Processing Pipeline 0e9eb035156e160356cd6c8577c7d423 https://www.encodeproject.org/files/ENCFF182UOW/@@download/ENCFF182UOW.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF767OVB bed narrowPeak conservative idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF500MWL, ENCFF552ARU, ENCFF951TSS 256334 ENCODE Processing Pipeline 4347abd67b74ad2f0ae63b23a3b75344 https://www.encodeproject.org/files/ENCFF767OVB/@@download/ENCFF767OVB.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF540AAP bed narrowPeak optimal idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF500MWL, ENCFF552ARU, ENCFF951TSS 296703 ENCODE Processing Pipeline b57a74e5aefde946a17deafa312166e5 https://www.encodeproject.org/files/ENCFF540AAP/@@download/ENCFF540AAP.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF599JVH bigWig signal p-value ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF575GRT 440770358 ENCODE Processing Pipeline 998b94896f55e33cfb8a8e22d067e39b https://www.encodeproject.org/files/ENCFF599JVH/@@download/ENCFF599JVH.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF431HWK bigWig signal p-value ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF177XDM, ENCFF562HPN 447435664 ENCODE Processing Pipeline c145c26e467e9f187c4de6f776492f02 https://www.encodeproject.org/files/ENCFF431HWK/@@download/ENCFF431HWK.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF552ARU bed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF575GRT 4276491 ENCODE Processing Pipeline 00596bd90d24e6ae7ae0415d9b9d1bda https://www.encodeproject.org/files/ENCFF552ARU/@@download/ENCFF552ARU.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF500MWL bed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF177XDM, ENCFF562HPN, ENCFF575GRT 5380462 ENCODE Processing Pipeline 3c6d3fdc0ab5c03f9476432431c00dee https://www.encodeproject.org/files/ENCFF500MWL/@@download/ENCFF500MWL.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF703LXC bigBed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF552ARU 10488664 ENCODE Processing Pipeline 7b5854eeee6123157f4ed83bb557f728 https://www.encodeproject.org/files/ENCFF703LXC/@@download/ENCFF703LXC.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF670GXF bigBed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF951TSS 10983165 ENCODE Processing Pipeline 9836668706e09116647c73b2073cb64a https://www.encodeproject.org/files/ENCFF670GXF/@@download/ENCFF670GXF.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF845MJO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF540AAP 672569 ENCODE Processing Pipeline 3133fda6609c451e52afe8ec5f1f6fc5 https://www.encodeproject.org/files/ENCFF845MJO/@@download/ENCFF845MJO.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF790GTG bigWig fold change over control ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF177XDM, ENCFF562HPN 367154319 ENCODE Processing Pipeline 3f476c1b6e030fcab2b49958ab810bd3 https://www.encodeproject.org/files/ENCFF790GTG/@@download/ENCFF790GTG.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF697UIX bigWig fold change over control ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF305OWM, ENCFF958RTR 252722852 ENCODE Processing Pipeline 118bd4836a3098abb303fb2e9f935103 https://www.encodeproject.org/files/ENCFF697UIX/@@download/ENCFF697UIX.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF950ZUX bigWig signal p-value ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF305OWM, ENCFF958RTR 400632900 ENCODE Processing Pipeline 3967cca05193d03d5bf6064f6965bb1e https://www.encodeproject.org/files/ENCFF950ZUX/@@download/ENCFF950ZUX.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF393YZE bigWig signal p-value ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF388CVC, ENCFF958RTR 520460804 ENCODE Processing Pipeline 9316d5c1614ce94d959aa279fe6c5c9b https://www.encodeproject.org/files/ENCFF393YZE/@@download/ENCFF393YZE.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF660IAV bigWig signal p-value ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF305OWM, ENCFF388CVC, ENCFF958RTR 586335003 ENCODE Processing Pipeline 2f78be6caf5011c466aff99e3a16e384 https://www.encodeproject.org/files/ENCFF660IAV/@@download/ENCFF660IAV.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF229EJD bigWig fold change over control ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF388CVC, ENCFF958RTR 366552642 ENCODE Processing Pipeline 8ac7a402c2db0a4cb0b99ceb684d921c https://www.encodeproject.org/files/ENCFF229EJD/@@download/ENCFF229EJD.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF411THR bigWig fold change over control ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF305OWM, ENCFF388CVC, ENCFF958RTR 540924624 ENCODE Processing Pipeline bf2ae531b1d8e2bd061020d8011fe3dc https://www.encodeproject.org/files/ENCFF411THR/@@download/ENCFF411THR.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF626GCR bed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF305OWM, ENCFF958RTR 4217685 ENCODE Processing Pipeline 713f7c15938a74780918c02c698d614e https://www.encodeproject.org/files/ENCFF626GCR/@@download/ENCFF626GCR.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF897WUX bigBed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF626GCR 10422503 ENCODE Processing Pipeline 466a1feccfa25b70cefb0463ea626ecc https://www.encodeproject.org/files/ENCFF897WUX/@@download/ENCFF897WUX.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF070XEI bigBed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF466MWY 11252634 ENCODE Processing Pipeline f5ddeac77900443c6a5e95d397c5927e https://www.encodeproject.org/files/ENCFF070XEI/@@download/ENCFF070XEI.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF270KWZ bed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF388CVC, ENCFF958RTR 4858938 ENCODE Processing Pipeline 921c7d3a7304282c1fbd1270122c75c3 https://www.encodeproject.org/files/ENCFF270KWZ/@@download/ENCFF270KWZ.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF466MWY bed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF305OWM, ENCFF388CVC, ENCFF958RTR 5338861 ENCODE Processing Pipeline 7e3b5d35b97608971c26401399c1cadb https://www.encodeproject.org/files/ENCFF466MWY/@@download/ENCFF466MWY.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF544NRC bed narrowPeak optimal idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF270KWZ, ENCFF466MWY, ENCFF626GCR 288644 ENCODE Processing Pipeline c83c2b45f1ee4fc7ad3a0bce44c11279 https://www.encodeproject.org/files/ENCFF544NRC/@@download/ENCFF544NRC.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF528MPL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF544NRC 539605 ENCODE Processing Pipeline 16b2aa454feafb9fb601a05e08006ff1 https://www.encodeproject.org/files/ENCFF528MPL/@@download/ENCFF528MPL.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF430QAC bigBed narrowPeak peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF270KWZ 10948773 ENCODE Processing Pipeline 9db3c15ce8e19f2c4d28ecd638503ce6 https://www.encodeproject.org/files/ENCFF430QAC/@@download/ENCFF430QAC.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF325FCK bed narrowPeak conservative idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF270KWZ, ENCFF466MWY, ENCFF626GCR 251008 ENCODE Processing Pipeline b888ed8b09e2012ec79b20eb1519b618 https://www.encodeproject.org/files/ENCFF325FCK/@@download/ENCFF325FCK.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF476ZNS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF325FCK 488152 ENCODE Processing Pipeline 05e812a1cd804603c84aafa7bff69983 https://www.encodeproject.org/files/ENCFF476ZNS/@@download/ENCFF476ZNS.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NYC bam alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NYK 763139690 Richard Myers, HAIB e496d25a3a25b0a3311fe3a52b11646d https://www.encodeproject.org/files/ENCFF000NYC/@@download/ENCFF000NYC.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000NYD bigBed broadPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TXS 200961 Richard Myers, HAIB 222306f35061a6607873f0c2e10d78cf https://www.encodeproject.org/files/ENCFF000NYD/@@download/ENCFF000NYD.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000NYE bigBed broadPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TXT 168287 Richard Myers, HAIB 513a4ce93ec1e04dc661bda834dbae41 https://www.encodeproject.org/files/ENCFF000NYE/@@download/ENCFF000NYE.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000NYF bam alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NYN 976393022 Richard Myers, HAIB a0db4c4f98b9b5f42007955b2afaa751 https://www.encodeproject.org/files/ENCFF000NYF/@@download/ENCFF000NYF.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000NYG bigWig raw signal ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 8687856 Richard Myers, HAIB 326175949a41294491bb704a219a1cdd https://www.encodeproject.org/files/ENCFF000NYG/@@download/ENCFF000NYG.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NYI bigWig raw signal ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 6190287 Richard Myers, HAIB a55185f2b42444c4310e801dbb25a05a https://www.encodeproject.org/files/ENCFF000NYI/@@download/ENCFF000NYI.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NYK fastq reads ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 612423185 Richard Myers, HAIB 10a1b8c37dfe6fc057631dc03acee9d3 https://www.encodeproject.org/files/ENCFF000NYK/@@download/ENCFF000NYK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000NYN fastq reads ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1021427875 Richard Myers, HAIB 23f72aa666973d48f41a7bc3113e6ee0 https://www.encodeproject.org/files/ENCFF000NYN/@@download/ENCFF000NYN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODO/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF001TXS bed broadPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 98767 Richard Myers, HAIB 5be290b00c270f6f6dec142726dfae9d https://www.encodeproject.org/files/ENCFF001TXS/@@download/ENCFF001TXS.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001TXT bed broadPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 89336 Richard Myers, HAIB a20d72c70d2e82be2b7bdf75e03d3c1f https://www.encodeproject.org/files/ENCFF001TXT/@@download/ENCFF001TXT.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CHH bed narrowPeak optimal idr thresholded peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 143093 ENCODE Consortium Analysis Working Group 044de7bd595573dff64ec47830e92bf3 https://www.encodeproject.org/files/ENCFF002CHH/@@download/ENCFF002CHH.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF251ELV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE ENCFF002CHH 357623 ENCODE Consortium 06d1266c5a02e4d189525d5e2a77da78 https://www.encodeproject.org/files/ENCFF251ELV/@@download/ENCFF251ELV.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF471UKN bam unfiltered alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYK, ENCFF643CGH 800235482 ENCODE Processing Pipeline 07bee68494af308a80fa981ad85ec93f https://www.encodeproject.org/files/ENCFF471UKN/@@download/ENCFF471UKN.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF894EID bam alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYK, ENCFF643CGH 473312374 ENCODE Processing Pipeline 54a9b1c6eb2cb3ae493132121dbe776e https://www.encodeproject.org/files/ENCFF894EID/@@download/ENCFF894EID.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF407MEC bam unfiltered alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NYN, ENCFF643CGH 1040754385 ENCODE Processing Pipeline 765f0dfa19820083c259e276b929d703 https://www.encodeproject.org/files/ENCFF407MEC/@@download/ENCFF407MEC.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF569QEN bam alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NYN, ENCFF643CGH 521791845 ENCODE Processing Pipeline 80b445f0a422ba4c8c19d56dd7bcba4e https://www.encodeproject.org/files/ENCFF569QEN/@@download/ENCFF569QEN.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF753DEQ bam unfiltered alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYK, ENCFF807MUK 797739085 ENCODE Processing Pipeline 8a7b8c91aaf455558a8a7283d94898b1 https://www.encodeproject.org/files/ENCFF753DEQ/@@download/ENCFF753DEQ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF929UNL bam unfiltered alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NYN, ENCFF807MUK 1040220372 ENCODE Processing Pipeline e7489ba9c425374b3c1fef5f5b3dbd1e https://www.encodeproject.org/files/ENCFF929UNL/@@download/ENCFF929UNL.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF549FFR bam alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYK, ENCFF807MUK 470964396 ENCODE Processing Pipeline 114d6ca233ae105f66a9e7cfce0432c5 https://www.encodeproject.org/files/ENCFF549FFR/@@download/ENCFF549FFR.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF892PZK bam alignments ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NYN, ENCFF807MUK 515481333 ENCODE Processing Pipeline 9788117fc415cf1e9e720205efce13c2 https://www.encodeproject.org/files/ENCFF892PZK/@@download/ENCFF892PZK.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF346XFA bigWig signal p-value ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF430ZCF, ENCFF562HPN, ENCFF894EID 637095392 ENCODE Processing Pipeline 1dba3fc1be83714a78d31b6cb92e0f20 https://www.encodeproject.org/files/ENCFF346XFA/@@download/ENCFF346XFA.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF054ANM bigWig signal p-value ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF430ZCF, ENCFF562HPN, ENCFF569QEN 711361632 ENCODE Processing Pipeline 348862782d39dde39cdb350e62a4d6b4 https://www.encodeproject.org/files/ENCFF054ANM/@@download/ENCFF054ANM.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF043OML bigWig signal p-value ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF430ZCF, ENCFF562HPN, ENCFF569QEN, ENCFF894EID 662282019 ENCODE Processing Pipeline 79b9b7a5fb717595658d457674ccb4bd https://www.encodeproject.org/files/ENCFF043OML/@@download/ENCFF043OML.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF854VYC bigWig fold change over control ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF430ZCF, ENCFF562HPN, ENCFF894EID 323372919 ENCODE Processing Pipeline a975d52eb492007c2e352becc30b24b4 https://www.encodeproject.org/files/ENCFF854VYC/@@download/ENCFF854VYC.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF700VHX bigWig fold change over control ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF430ZCF, ENCFF562HPN, ENCFF569QEN 346653276 ENCODE Processing Pipeline f81b651c33dc8a72368e3a1b56ffa285 https://www.encodeproject.org/files/ENCFF700VHX/@@download/ENCFF700VHX.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF027PQW bigWig fold change over control ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF430ZCF, ENCFF562HPN, ENCFF569QEN, ENCFF894EID 572068614 ENCODE Processing Pipeline 1d46765d5cc050d2653a972a3e4cd0f8 https://www.encodeproject.org/files/ENCFF027PQW/@@download/ENCFF027PQW.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF758EWS bed narrowPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF430ZCF, ENCFF562HPN, ENCFF569QEN 4232323 ENCODE Processing Pipeline 5d46accfa744a67675230dfae78da98d https://www.encodeproject.org/files/ENCFF758EWS/@@download/ENCFF758EWS.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF569CKR bigBed narrowPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF260LSE 10890033 ENCODE Processing Pipeline 00dfcddc639c73dc01ffc3e22fa8b890 https://www.encodeproject.org/files/ENCFF569CKR/@@download/ENCFF569CKR.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF260LSE bed narrowPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF430ZCF, ENCFF562HPN, ENCFF894EID 4767248 ENCODE Processing Pipeline 178b73bacfea699e8ae7bd809aad2601 https://www.encodeproject.org/files/ENCFF260LSE/@@download/ENCFF260LSE.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF300OPW bed narrowPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF430ZCF, ENCFF562HPN, ENCFF569QEN, ENCFF894EID 5394954 ENCODE Processing Pipeline 302865d2933fc134d66d8f1f850b2c20 https://www.encodeproject.org/files/ENCFF300OPW/@@download/ENCFF300OPW.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF780SWK bigBed narrowPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF300OPW 11415507 ENCODE Processing Pipeline 9b5c43a4cfc4faac3afae14b6b758df6 https://www.encodeproject.org/files/ENCFF780SWK/@@download/ENCFF780SWK.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF519TUM bigBed narrowPeak peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF758EWS 10407062 ENCODE Processing Pipeline f9aa457e6aad978be7c7bbc10720be03 https://www.encodeproject.org/files/ENCFF519TUM/@@download/ENCFF519TUM.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF854AIH bed narrowPeak conservative idr thresholded peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF260LSE, ENCFF300OPW, ENCFF419RSJ, ENCFF758EWS 78145 ENCODE Processing Pipeline f4af8f1be6738544efb126972f42fcbf https://www.encodeproject.org/files/ENCFF854AIH/@@download/ENCFF854AIH.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF313CII bed narrowPeak optimal idr thresholded peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF260LSE, ENCFF300OPW, ENCFF419RSJ, ENCFF758EWS 120679 ENCODE Processing Pipeline ca4db15a84a95381cc0cb84611326272 https://www.encodeproject.org/files/ENCFF313CII/@@download/ENCFF313CII.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF382TDG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313CII 258099 ENCODE Processing Pipeline 74064b21f789cfec8d2f539fd8212010 https://www.encodeproject.org/files/ENCFF382TDG/@@download/ENCFF382TDG.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF347ZDK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF854AIH 198073 ENCODE Processing Pipeline 13ae190567f8ca008fd8a463bdbb5113 https://www.encodeproject.org/files/ENCFF347ZDK/@@download/ENCFF347ZDK.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PZJ bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PZV 432779940 Richard Myers, HAIB 4b3bfc98f1cb4281475f256442454c3d https://www.encodeproject.org/files/ENCFF000PZJ/@@download/ENCFF000PZJ.bam hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PZL bigBed broadPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJT 569845 Richard Myers, HAIB 5d43928af48252d4edbd32a8347f4e9d https://www.encodeproject.org/files/ENCFF000PZL/@@download/ENCFF000PZL.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PZM bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PZY 1076704850 Richard Myers, HAIB 6f0499d31a3f646b08bab254754a8755 https://www.encodeproject.org/files/ENCFF000PZM/@@download/ENCFF000PZM.bam hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PZN bigBed broadPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJU 883280 Richard Myers, HAIB f3b9e6ee482a6b5908b2fc92c9ab3f89 https://www.encodeproject.org/files/ENCFF000PZN/@@download/ENCFF000PZN.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PZO bigWig raw signal ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 19533657 Richard Myers, HAIB c71ba57618686aa1c314a94dc44a54e4 https://www.encodeproject.org/files/ENCFF000PZO/@@download/ENCFF000PZO.bigWig hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PZQ bigWig raw signal ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 35479114 Richard Myers, HAIB 5e8431eaf9055ce965b83fd4e2f912c0 https://www.encodeproject.org/files/ENCFF000PZQ/@@download/ENCFF000PZQ.bigWig hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PZV fastq reads ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 494929517 Richard Myers, HAIB d09692ac6acf1416cc43e5ef452e0223 https://www.encodeproject.org/files/ENCFF000PZV/@@download/ENCFF000PZV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PZY fastq reads ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1026344517 Richard Myers, HAIB 937f6244ae245604b7e3098cf3ee6665 https://www.encodeproject.org/files/ENCFF000PZY/@@download/ENCFF000PZY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF001UJT bed broadPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 346418 Richard Myers, HAIB 38b1460bc8bbad5ee52956d4e78c6aba https://www.encodeproject.org/files/ENCFF001UJT/@@download/ENCFF001UJT.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF001UJU bed broadPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 606633 Richard Myers, HAIB d954c79cc03fe81ab436de905d2a2818 https://www.encodeproject.org/files/ENCFF001UJU/@@download/ENCFF001UJU.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF002CLW bed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 547340 ENCODE Consortium Analysis Working Group 7f45cf21d10df1bd05cc423854e7a79f https://www.encodeproject.org/files/ENCFF002CLW/@@download/ENCFF002CLW.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF523DQU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE ENCFF002CLW 1179500 ENCODE Consortium 459542967cf3754f033c4964f792decf https://www.encodeproject.org/files/ENCFF523DQU/@@download/ENCFF523DQU.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF331TRC bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZV, ENCFF643CGH 189715385 ENCODE Processing Pipeline 7a7b384e5a57335211f6b39bd28a8b8b https://www.encodeproject.org/files/ENCFF331TRC/@@download/ENCFF331TRC.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF236BRO bam unfiltered alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZV, ENCFF643CGH 563509802 ENCODE Processing Pipeline cb51747847cf9f59f35b28effac2a13e https://www.encodeproject.org/files/ENCFF236BRO/@@download/ENCFF236BRO.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF174XBV bam unfiltered alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZY, ENCFF643CGH 1324290862 ENCODE Processing Pipeline cc5b8b9c0000a55124ffc0cb7afdd731 https://www.encodeproject.org/files/ENCFF174XBV/@@download/ENCFF174XBV.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF535PLW bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZY, ENCFF643CGH 767172471 ENCODE Processing Pipeline 298e40432ceeb43681e43e6c31aa40d2 https://www.encodeproject.org/files/ENCFF535PLW/@@download/ENCFF535PLW.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF622LEW bam unfiltered alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZV, ENCFF807MUK 562418712 ENCODE Processing Pipeline bac1ff8780d8d1caf26e34f05621e81e https://www.encodeproject.org/files/ENCFF622LEW/@@download/ENCFF622LEW.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF649QHV bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZV, ENCFF807MUK 189978068 ENCODE Processing Pipeline 3a5e6de3bdedba129a7a9623f3a29aad https://www.encodeproject.org/files/ENCFF649QHV/@@download/ENCFF649QHV.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF400SJA bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZY, ENCFF807MUK 767732324 ENCODE Processing Pipeline 62bd020b3f854ed98a5598c63c1f35a2 https://www.encodeproject.org/files/ENCFF400SJA/@@download/ENCFF400SJA.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF591FHN bam unfiltered alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZY, ENCFF807MUK 1321017359 ENCODE Processing Pipeline 2ad101fb274e4591871122e9026abf36 https://www.encodeproject.org/files/ENCFF591FHN/@@download/ENCFF591FHN.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF218HJX bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331TRC, ENCFF913HVS 287242249 ENCODE Processing Pipeline e2a5801f0fdeaef6d944511cae5d4fff https://www.encodeproject.org/files/ENCFF218HJX/@@download/ENCFF218HJX.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF223ZWR bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF535PLW, ENCFF913HVS 439172363 ENCODE Processing Pipeline 30e3fadce087ef8924a2d13200e5e2ae https://www.encodeproject.org/files/ENCFF223ZWR/@@download/ENCFF223ZWR.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF401ULN bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331TRC, ENCFF535PLW, ENCFF913HVS 463754730 ENCODE Processing Pipeline cccb5623f964f89b5a57c61a65b076ec https://www.encodeproject.org/files/ENCFF401ULN/@@download/ENCFF401ULN.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF992ARM bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331TRC, ENCFF913HVS 99818461 ENCODE Processing Pipeline df619c3765cbd87752e83a98df7a6efd https://www.encodeproject.org/files/ENCFF992ARM/@@download/ENCFF992ARM.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF070LSE bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF535PLW, ENCFF913HVS 342033978 ENCODE Processing Pipeline 70809d95e3ae9dd7ee19a37b68a5ddd5 https://www.encodeproject.org/files/ENCFF070LSE/@@download/ENCFF070LSE.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF576IQY bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331TRC, ENCFF535PLW, ENCFF913HVS 407166590 ENCODE Processing Pipeline 689734ddfaf772f6ff6fd4f9f96ef98e https://www.encodeproject.org/files/ENCFF576IQY/@@download/ENCFF576IQY.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF914RGQ bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331TRC, ENCFF535PLW, ENCFF913HVS 5484339 ENCODE Processing Pipeline a14031581d0788f2eda7584f5fea43c6 https://www.encodeproject.org/files/ENCFF914RGQ/@@download/ENCFF914RGQ.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF617WYS bed narrowPeak conservative idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF373RYW, ENCFF419RSJ, ENCFF914RGQ, ENCFF940ZYR 276128 ENCODE Processing Pipeline 22af1e45992aaabb040e3d227c4300d0 https://www.encodeproject.org/files/ENCFF617WYS/@@download/ENCFF617WYS.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF463GCH bed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF373RYW, ENCFF419RSJ, ENCFF914RGQ, ENCFF940ZYR 569548 ENCODE Processing Pipeline 425ae520c266a3da61db4b1767c41189 https://www.encodeproject.org/files/ENCFF463GCH/@@download/ENCFF463GCH.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF293DZJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF463GCH 1183034 ENCODE Processing Pipeline f87fe26fe636e497eecaf1e9675b1c5c https://www.encodeproject.org/files/ENCFF293DZJ/@@download/ENCFF293DZJ.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF373RYW bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331TRC, ENCFF913HVS 1718491 ENCODE Processing Pipeline 2ea02304fb23b1579258f43d988f1954 https://www.encodeproject.org/files/ENCFF373RYW/@@download/ENCFF373RYW.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF940ZYR bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF535PLW, ENCFF913HVS 5090410 ENCODE Processing Pipeline af49958ede7ca18fdc1a0dfe0afdcbbc https://www.encodeproject.org/files/ENCFF940ZYR/@@download/ENCFF940ZYR.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF610QMV bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF373RYW 3969005 ENCODE Processing Pipeline f7bea53f9bdd0de20d3c6ff84d7ffe07 https://www.encodeproject.org/files/ENCFF610QMV/@@download/ENCFF610QMV.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF263XHO bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF914RGQ 13279552 ENCODE Processing Pipeline f06ef26a5f3fa37e89832b626e365d15 https://www.encodeproject.org/files/ENCFF263XHO/@@download/ENCFF263XHO.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF699AIM bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF940ZYR 10893089 ENCODE Processing Pipeline 30b0e7e67a6d2d044b0a67acc2445d70 https://www.encodeproject.org/files/ENCFF699AIM/@@download/ENCFF699AIM.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF419PLT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF617WYS 568647 ENCODE Processing Pipeline 7b18faaa29c73510b2c20861549a630f https://www.encodeproject.org/files/ENCFF419PLT/@@download/ENCFF419PLT.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000NBT bam alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NCD 1005317542 Richard Myers, HAIB 405f4310668fa12422690bebab505b2a https://www.encodeproject.org/files/ENCFF000NBT/@@download/ENCFF000NBT.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBU bam alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NCF 1015862954 Richard Myers, HAIB b924529f1c78d31f1cf86490a198dd54 https://www.encodeproject.org/files/ENCFF000NBU/@@download/ENCFF000NBU.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBV bigBed broadPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TSR 252537 Richard Myers, HAIB b69a57598189c12840b012b6fe74fd23 https://www.encodeproject.org/files/ENCFF000NBV/@@download/ENCFF000NBV.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBW bigBed broadPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TSS 360077 Richard Myers, HAIB c35f19bd671bad7fc0dcb1f8f5de90c7 https://www.encodeproject.org/files/ENCFF000NBW/@@download/ENCFF000NBW.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBY bigWig raw signal ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 17361779 Richard Myers, HAIB 6584d6ed296317d36570bcfc9b4cef83 https://www.encodeproject.org/files/ENCFF000NBY/@@download/ENCFF000NBY.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NCA bigWig raw signal ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 24640105 Richard Myers, HAIB bed212d8a63a91697c09b50e56d173e1 https://www.encodeproject.org/files/ENCFF000NCA/@@download/ENCFF000NCA.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NCD fastq reads ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1047820956 Richard Myers, HAIB 703985123943d5f4f82110fae04632d1 https://www.encodeproject.org/files/ENCFF000NCD/@@download/ENCFF000NCD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NCO/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NCF fastq reads ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1123154303 Richard Myers, HAIB 9fc72a1ab67b3aa0de71898f45daeb5e https://www.encodeproject.org/files/ENCFF000NCF/@@download/ENCFF000NCF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NCL/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF001TSR bed broadPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 100652 Richard Myers, HAIB 58eeab04ab318d1b9db4c30936b242ea https://www.encodeproject.org/files/ENCFF001TSR/@@download/ENCFF001TSR.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TSS bed broadPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 175361 Richard Myers, HAIB a46f07e75f37f3300dda587b541b3209 https://www.encodeproject.org/files/ENCFF001TSS/@@download/ENCFF001TSS.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CFS bed narrowPeak optimal idr thresholded peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 263337 ENCODE Consortium Analysis Working Group 219d9f444edeb30973949904d40d519e https://www.encodeproject.org/files/ENCFF002CFS/@@download/ENCFF002CFS.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF269VZG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE ENCFF002CFS 750418 ENCODE Consortium 564f7e148cda4c7fd60853dc456036eb https://www.encodeproject.org/files/ENCFF269VZG/@@download/ENCFF269VZG.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF512MUR bam unfiltered alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCF, ENCFF643CGH 1422358774 ENCODE Processing Pipeline 969a631f85872aebcd0601fab09fe0e8 https://www.encodeproject.org/files/ENCFF512MUR/@@download/ENCFF512MUR.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF690ZBC bam unfiltered alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCD, ENCFF643CGH 1342312317 ENCODE Processing Pipeline c1ce004227c2e45e82936583c95c3291 https://www.encodeproject.org/files/ENCFF690ZBC/@@download/ENCFF690ZBC.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF160JFP bam alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCF, ENCFF643CGH 769068933 ENCODE Processing Pipeline f51a691bffa5ffa14f3afbd31031e174 https://www.encodeproject.org/files/ENCFF160JFP/@@download/ENCFF160JFP.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF296AWB bam alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCD, ENCFF643CGH 775177527 ENCODE Processing Pipeline c83c15cfa6850c98c340cd6e912eb56c https://www.encodeproject.org/files/ENCFF296AWB/@@download/ENCFF296AWB.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF687AHO bam unfiltered alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCF, ENCFF807MUK 1416119631 ENCODE Processing Pipeline 598141dedacd3ad1757e752b156530c1 https://www.encodeproject.org/files/ENCFF687AHO/@@download/ENCFF687AHO.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF548VNJ bam alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCD, ENCFF807MUK 775366247 ENCODE Processing Pipeline 7dc474927d0f3bf341e291fa9b138697 https://www.encodeproject.org/files/ENCFF548VNJ/@@download/ENCFF548VNJ.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF435WGN bam unfiltered alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCD, ENCFF807MUK 1336841398 ENCODE Processing Pipeline a2ff9d183261709f720b781e91abd9ff https://www.encodeproject.org/files/ENCFF435WGN/@@download/ENCFF435WGN.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF285CTQ bam alignments ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCF, ENCFF807MUK 769143379 ENCODE Processing Pipeline e758f7080b78ee4cb10231f00f46fd0a https://www.encodeproject.org/files/ENCFF285CTQ/@@download/ENCFF285CTQ.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF070ZVN bigWig signal p-value ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF160JFP, ENCFF440RZX 387233533 ENCODE Processing Pipeline ca33838bfd453251f74a3f60339f7dbf https://www.encodeproject.org/files/ENCFF070ZVN/@@download/ENCFF070ZVN.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF399LLW bigWig signal p-value ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF296AWB, ENCFF440RZX 578865049 ENCODE Processing Pipeline 1a59fe4c7f939bd4d5458f3fb9204d86 https://www.encodeproject.org/files/ENCFF399LLW/@@download/ENCFF399LLW.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF145KZZ bigWig fold change over control ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF296AWB, ENCFF440RZX 384441135 ENCODE Processing Pipeline 1efce6d3ee99f198b82d44f1189e82e0 https://www.encodeproject.org/files/ENCFF145KZZ/@@download/ENCFF145KZZ.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF827JJC bed narrowPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF160JFP, ENCFF296AWB, ENCFF440RZX 5588567 ENCODE Processing Pipeline 05dc9ff9e4bcb380be13e337a57fff8b https://www.encodeproject.org/files/ENCFF827JJC/@@download/ENCFF827JJC.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF556FWG bigWig signal p-value ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF160JFP, ENCFF296AWB, ENCFF440RZX 672260863 ENCODE Processing Pipeline b069202d84a1be419302698c0a9f4c99 https://www.encodeproject.org/files/ENCFF556FWG/@@download/ENCFF556FWG.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF591NAK bed narrowPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF160JFP, ENCFF440RZX 4169677 ENCODE Processing Pipeline 1b2bd253755d2f504c4a010af4fbfd5d https://www.encodeproject.org/files/ENCFF591NAK/@@download/ENCFF591NAK.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF890RIW bigWig fold change over control ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF160JFP, ENCFF440RZX 295541021 ENCODE Processing Pipeline f1d1c750a4f64eb8d95799ee06040981 https://www.encodeproject.org/files/ENCFF890RIW/@@download/ENCFF890RIW.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF548YOD bigWig fold change over control ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF160JFP, ENCFF296AWB, ENCFF440RZX 630099094 ENCODE Processing Pipeline bf990c7738e00ab5b822f8e25a79035c https://www.encodeproject.org/files/ENCFF548YOD/@@download/ENCFF548YOD.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF948WVM bed narrowPeak conservative idr thresholded peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF431LJN, ENCFF591NAK, ENCFF827JJC 195574 ENCODE Processing Pipeline ad7cea63a2147bd1e9f0c9ee5951604a https://www.encodeproject.org/files/ENCFF948WVM/@@download/ENCFF948WVM.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF431LJN bed narrowPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF296AWB, ENCFF440RZX 4813437 ENCODE Processing Pipeline e27d66b65e3c7753d8563855e00a2758 https://www.encodeproject.org/files/ENCFF431LJN/@@download/ENCFF431LJN.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF873WCD bigBed narrowPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF591NAK 10496305 ENCODE Processing Pipeline 84c8c2e19e7e3993024b0250c771c84c https://www.encodeproject.org/files/ENCFF873WCD/@@download/ENCFF873WCD.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF810HLX bigBed narrowPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF431LJN 11114608 ENCODE Processing Pipeline fd121cf6e2d7471647a3f7b406e15178 https://www.encodeproject.org/files/ENCFF810HLX/@@download/ENCFF810HLX.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF166EHB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF714KXI 448649 ENCODE Processing Pipeline e2ad3ee13a7f1280b16026e9c97e9690 https://www.encodeproject.org/files/ENCFF166EHB/@@download/ENCFF166EHB.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF431XFB bigBed narrowPeak peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF827JJC 11413117 ENCODE Processing Pipeline 14a2e084eb18266565d0f27ecaf40e96 https://www.encodeproject.org/files/ENCFF431XFB/@@download/ENCFF431XFB.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF195GIF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF948WVM 402183 ENCODE Processing Pipeline 9cbeca480150edf89a374c167b1bdd00 https://www.encodeproject.org/files/ENCFF195GIF/@@download/ENCFF195GIF.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF714KXI bed narrowPeak optimal idr thresholded peaks ENCSR000BHG ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF431LJN, ENCFF591NAK, ENCFF827JJC 227295 ENCODE Processing Pipeline d1451893dd477d427232f89d97b96ce4 https://www.encodeproject.org/files/ENCFF714KXI/@@download/ENCFF714KXI.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NWO bam alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NXA 446351594 Richard Myers, HAIB 445b6a8ad57ecd0f738a45dd315d2a71 https://www.encodeproject.org/files/ENCFF000NWO/@@download/ENCFF000NWO.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NWP bigBed broadPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TXI 501789 Richard Myers, HAIB e04095acd09e023c6dabc4eb709356f2 https://www.encodeproject.org/files/ENCFF000NWP/@@download/ENCFF000NWP.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NWQ bigBed broadPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TXJ 351826 Richard Myers, HAIB 196739b782dfbe669a059ad94e1d1589 https://www.encodeproject.org/files/ENCFF000NWQ/@@download/ENCFF000NWQ.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NWR bam alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NXC 782651201 Richard Myers, HAIB e2756e0740c6f7524dd7e494512f995f https://www.encodeproject.org/files/ENCFF000NWR/@@download/ENCFF000NWR.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NWS bigWig raw signal ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 11234028 Richard Myers, HAIB c7a49123e55104b113589646d8736f4a https://www.encodeproject.org/files/ENCFF000NWS/@@download/ENCFF000NWS.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NWU bigWig raw signal ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 17121973 Richard Myers, HAIB 686f63e1eec2e91fff8ae2948eb63fe2 https://www.encodeproject.org/files/ENCFF000NWU/@@download/ENCFF000NWU.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NXA fastq reads ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 395056731 Richard Myers, HAIB 1ca98854b5773e20d8d1ecf4559b1f4b https://www.encodeproject.org/files/ENCFF000NXA/@@download/ENCFF000NXA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NXC fastq reads ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 741553023 Richard Myers, HAIB 59927ab7d09d1f0c8adc231c0f76123c https://www.encodeproject.org/files/ENCFF000NXC/@@download/ENCFF000NXC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001TXI bed broadPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 287783 Richard Myers, HAIB 87aafa7d49a5ba352c1c578c89643d1f https://www.encodeproject.org/files/ENCFF001TXI/@@download/ENCFF001TXI.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001TXJ bed broadPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 165195 Richard Myers, HAIB 6279041a2ad3b6324f65adb1e89a026f https://www.encodeproject.org/files/ENCFF001TXJ/@@download/ENCFF001TXJ.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CHC bed narrowPeak optimal idr thresholded peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 341744 ENCODE Consortium Analysis Working Group 54631587162d50440ad8b95c7c7e85c5 https://www.encodeproject.org/files/ENCFF002CHC/@@download/ENCFF002CHC.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF217YUT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE ENCFF002CHC 782365 ENCODE Consortium b742ab5eaf6250388d9dff122375fdff https://www.encodeproject.org/files/ENCFF217YUT/@@download/ENCFF217YUT.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF105SCN bam unfiltered alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NXA, ENCFF643CGH 516739571 ENCODE Processing Pipeline bd30c26e0f36fe58b150366a6eee4bf3 https://www.encodeproject.org/files/ENCFF105SCN/@@download/ENCFF105SCN.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF510YAI bam alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NXA, ENCFF643CGH 287797489 ENCODE Processing Pipeline 002600767b501270177d2fd821d863db https://www.encodeproject.org/files/ENCFF510YAI/@@download/ENCFF510YAI.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF405ENX bam unfiltered alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NXC, ENCFF643CGH 937125696 ENCODE Processing Pipeline c23c6492a2b55e5bd573212c45500309 https://www.encodeproject.org/files/ENCFF405ENX/@@download/ENCFF405ENX.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF476CBG bam alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NXC, ENCFF643CGH 412043094 ENCODE Processing Pipeline d048bf26f111ee7328da127541ae1f38 https://www.encodeproject.org/files/ENCFF476CBG/@@download/ENCFF476CBG.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF012YAB bam unfiltered alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NXA, ENCFF807MUK 516623832 ENCODE Processing Pipeline 3e9f3955536837049220ae4a582dc106 https://www.encodeproject.org/files/ENCFF012YAB/@@download/ENCFF012YAB.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF359HKJ bam unfiltered alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NXC, ENCFF807MUK 936089123 ENCODE Processing Pipeline 000ea03e8831b467297741b1579343fc https://www.encodeproject.org/files/ENCFF359HKJ/@@download/ENCFF359HKJ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF651UZJ bam alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NXA, ENCFF807MUK 284898385 ENCODE Processing Pipeline 2dcece7fa644c33b3c9ec91a7faf6918 https://www.encodeproject.org/files/ENCFF651UZJ/@@download/ENCFF651UZJ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF659SUJ bam alignments ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NXC, ENCFF807MUK 408553237 ENCODE Processing Pipeline 0b9a0c159415516cfd2c386b184fc260 https://www.encodeproject.org/files/ENCFF659SUJ/@@download/ENCFF659SUJ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF972LZR bigWig fold change over control ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF510YAI 183493900 ENCODE Processing Pipeline b87b5a74db12ad5563bece17cbf8a22f https://www.encodeproject.org/files/ENCFF972LZR/@@download/ENCFF972LZR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF306VZV bigWig signal p-value ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF510YAI 309767740 ENCODE Processing Pipeline b0baaba7aa53414114762eb526a65b6c https://www.encodeproject.org/files/ENCFF306VZV/@@download/ENCFF306VZV.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF099YNL bigWig fold change over control ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF476CBG, ENCFF488YYE 244480755 ENCODE Processing Pipeline b146d7854dfdd6e982ff6b120d519ed8 https://www.encodeproject.org/files/ENCFF099YNL/@@download/ENCFF099YNL.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF128TCK bigWig signal p-value ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF476CBG, ENCFF488YYE 319444926 ENCODE Processing Pipeline 69f27c133ac66e2afb8b1926a8272c0f https://www.encodeproject.org/files/ENCFF128TCK/@@download/ENCFF128TCK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF923AZM bigWig signal p-value ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF476CBG, ENCFF488YYE, ENCFF510YAI 452512456 ENCODE Processing Pipeline 272ef5b82356db22bec167d19ef48d19 https://www.encodeproject.org/files/ENCFF923AZM/@@download/ENCFF923AZM.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF373KCT bigWig fold change over control ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF476CBG, ENCFF488YYE, ENCFF510YAI 372488881 ENCODE Processing Pipeline b28e55cd97405791849e7edf5698cd14 https://www.encodeproject.org/files/ENCFF373KCT/@@download/ENCFF373KCT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF792NPH bed narrowPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF510YAI 3971799 ENCODE Processing Pipeline df1194e5e9d9fba66ffcb9b10889d96b https://www.encodeproject.org/files/ENCFF792NPH/@@download/ENCFF792NPH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF687SGU bed narrowPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF476CBG, ENCFF488YYE, ENCFF510YAI 4917102 ENCODE Processing Pipeline 6d27c319f535e3e0f0b25cd69aa097f0 https://www.encodeproject.org/files/ENCFF687SGU/@@download/ENCFF687SGU.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF747WVH bigBed narrowPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF792NPH 8794841 ENCODE Processing Pipeline 1e61b85f4b8db26b8ece738a850fe4c1 https://www.encodeproject.org/files/ENCFF747WVH/@@download/ENCFF747WVH.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF385QJP bed narrowPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF476CBG, ENCFF488YYE 4235606 ENCODE Processing Pipeline 706dd0c594eeb290fa808a7739b0c7e1 https://www.encodeproject.org/files/ENCFF385QJP/@@download/ENCFF385QJP.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF214EGO bigBed narrowPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF385QJP 10081503 ENCODE Processing Pipeline 90655e5e75fb2cdf83f2abad32edbd01 https://www.encodeproject.org/files/ENCFF214EGO/@@download/ENCFF214EGO.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF921HDK bigBed narrowPeak peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF687SGU 10724607 ENCODE Processing Pipeline 5c7ed3e6859a49ce772de6b07472dc94 https://www.encodeproject.org/files/ENCFF921HDK/@@download/ENCFF921HDK.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF151PNI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF958GXF 660225 ENCODE Processing Pipeline 7732aaadcd7532128a9c804372b7c374 https://www.encodeproject.org/files/ENCFF151PNI/@@download/ENCFF151PNI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF131JIX bed narrowPeak conservative idr thresholded peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF385QJP, ENCFF419RSJ, ENCFF687SGU, ENCFF792NPH 302801 ENCODE Processing Pipeline 33c168bab17da8e2d591665919dd7c09 https://www.encodeproject.org/files/ENCFF131JIX/@@download/ENCFF131JIX.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF254YDX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF131JIX 569008 ENCODE Processing Pipeline c8648a17dcbed263df674d58c2399371 https://www.encodeproject.org/files/ENCFF254YDX/@@download/ENCFF254YDX.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF958GXF bed narrowPeak optimal idr thresholded peaks ENCSR000BKB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF385QJP, ENCFF419RSJ, ENCFF687SGU, ENCFF792NPH 368392 ENCODE Processing Pipeline 1435a07403e10acf4e6191d5d35e43d5 https://www.encodeproject.org/files/ENCFF958GXF/@@download/ENCFF958GXF.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PPJ bam alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PPW 806719836 Richard Myers, HAIB 1a3767d19cb4ebf89cfa29ccc5404e1f https://www.encodeproject.org/files/ENCFF000PPJ/@@download/ENCFF000PPJ.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PPK bigBed broadPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHK 401974 Richard Myers, HAIB 9de3226b1af6b6483b7060c6558ada06 https://www.encodeproject.org/files/ENCFF000PPK/@@download/ENCFF000PPK.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PPL bigBed broadPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHL 914732 Richard Myers, HAIB 7ba06e9ccf0bab8df7469bf26f1f557b https://www.encodeproject.org/files/ENCFF000PPL/@@download/ENCFF000PPL.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PPN bam alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PQC 1407293343 Richard Myers, HAIB 8c0dd25c453b7a62f40baf1dd4495b90 https://www.encodeproject.org/files/ENCFF000PPN/@@download/ENCFF000PPN.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PPO bigWig raw signal ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 14946845 Richard Myers, HAIB 2a52acb7848d5510387a8086fab7033b https://www.encodeproject.org/files/ENCFF000PPO/@@download/ENCFF000PPO.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PPP bigWig raw signal ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 48237360 Richard Myers, HAIB c5ef48eb65f185c498268ea12021db41 https://www.encodeproject.org/files/ENCFF000PPP/@@download/ENCFF000PPP.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PPW fastq reads ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1053721655 Richard Myers, HAIB cbbc7af22415e7f7c4c39598bde6d122 https://www.encodeproject.org/files/ENCFF000PPW/@@download/ENCFF000PPW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PQC fastq reads ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1994482361 Richard Myers, HAIB fee989923a7d2e1b0b060f12e3d55942 https://www.encodeproject.org/files/ENCFF000PQC/@@download/ENCFF000PQC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UHK bed broadPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 170234 Richard Myers, HAIB a86033dce55d9cfa0be5d803b0cfca57 https://www.encodeproject.org/files/ENCFF001UHK/@@download/ENCFF001UHK.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UHL bed broadPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 479185 Richard Myers, HAIB 69a87fcceecf1640815c6a1c276ea496 https://www.encodeproject.org/files/ENCFF001UHL/@@download/ENCFF001UHL.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CLA bed narrowPeak optimal idr thresholded peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 394744 ENCODE Consortium Analysis Working Group f6dc806d724b85aa7551d084e3dc160b https://www.encodeproject.org/files/ENCFF002CLA/@@download/ENCFF002CLA.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF351QGY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE ENCFF002CLA 1065667 ENCODE Consortium 43810c9461ed15165cce10db57b736fe https://www.encodeproject.org/files/ENCFF351QGY/@@download/ENCFF351QGY.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF281FRR bam alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PPW, ENCFF643CGH 532601731 ENCODE Processing Pipeline 8cf1c3ac22adb3038a73178fbf453044 https://www.encodeproject.org/files/ENCFF281FRR/@@download/ENCFF281FRR.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF481VKV bam unfiltered alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PPW, ENCFF643CGH 1277463218 ENCODE Processing Pipeline 1892622058556e614dfa30fca15e5208 https://www.encodeproject.org/files/ENCFF481VKV/@@download/ENCFF481VKV.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF053QKA bam unfiltered alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PQC, ENCFF643CGH 2399396489 ENCODE Processing Pipeline a22fe0b7f7e517c8ef4352bd0d40d4b4 https://www.encodeproject.org/files/ENCFF053QKA/@@download/ENCFF053QKA.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF122ECM bam alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PQC, ENCFF643CGH 1002350183 ENCODE Processing Pipeline a803f0442da91e49f41539c9d0c9e359 https://www.encodeproject.org/files/ENCFF122ECM/@@download/ENCFF122ECM.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF504NAO bam unfiltered alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PPW, ENCFF807MUK 1272969839 ENCODE Processing Pipeline ed63ba72a4c1791e4751a70d01deb144 https://www.encodeproject.org/files/ENCFF504NAO/@@download/ENCFF504NAO.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF459TVC bam alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PPW, ENCFF807MUK 532915607 ENCODE Processing Pipeline 3fb9a0cd86bef37cadceb31bd726a1f3 https://www.encodeproject.org/files/ENCFF459TVC/@@download/ENCFF459TVC.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF688QGX bam unfiltered alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PQC, ENCFF807MUK 2391974525 ENCODE Processing Pipeline e9e1b8118b9d54e50758d6da06aad547 https://www.encodeproject.org/files/ENCFF688QGX/@@download/ENCFF688QGX.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF803DFL bam alignments ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PQC, ENCFF807MUK 1002904752 ENCODE Processing Pipeline e32e54992339067250e1e10f62745557 https://www.encodeproject.org/files/ENCFF803DFL/@@download/ENCFF803DFL.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF761TEO bigWig signal p-value ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF281FRR, ENCFF943DZB 290242473 ENCODE Processing Pipeline 0654cbeb4ea366efbfa650204166fac5 https://www.encodeproject.org/files/ENCFF761TEO/@@download/ENCFF761TEO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF341BMC bigWig signal p-value ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF122ECM, ENCFF943DZB 357311727 ENCODE Processing Pipeline 030e714b76099a8e1d09b6aa93e78466 https://www.encodeproject.org/files/ENCFF341BMC/@@download/ENCFF341BMC.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF564LAJ bigWig signal p-value ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF122ECM, ENCFF281FRR, ENCFF943DZB 329350663 ENCODE Processing Pipeline 7d5afa7693b715f6210f0336eb610ed2 https://www.encodeproject.org/files/ENCFF564LAJ/@@download/ENCFF564LAJ.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF467UXL bigWig fold change over control ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF281FRR, ENCFF943DZB 211492608 ENCODE Processing Pipeline 2e4f99551266b517edf7a0030c5fa7ef https://www.encodeproject.org/files/ENCFF467UXL/@@download/ENCFF467UXL.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF584EYJ bigWig fold change over control ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF122ECM, ENCFF943DZB 330605103 ENCODE Processing Pipeline 01277f3a1e703699d6f48885f844b0c6 https://www.encodeproject.org/files/ENCFF584EYJ/@@download/ENCFF584EYJ.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF768RBO bigBed narrowPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF446TZX 9929461 ENCODE Processing Pipeline 8bf193083d96a0454932b9d17ed01afb https://www.encodeproject.org/files/ENCFF768RBO/@@download/ENCFF768RBO.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF084IGC bigBed narrowPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF711WGR 12963392 ENCODE Processing Pipeline 669bc9c370524254c0809ed18e2a5def https://www.encodeproject.org/files/ENCFF084IGC/@@download/ENCFF084IGC.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF746QKY bigWig fold change over control ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF122ECM, ENCFF281FRR, ENCFF943DZB 478849583 ENCODE Processing Pipeline 5af3479da305930184f4bfa790ceb217 https://www.encodeproject.org/files/ENCFF746QKY/@@download/ENCFF746QKY.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF446TZX bed narrowPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF281FRR, ENCFF943DZB 4157143 ENCODE Processing Pipeline 6e23bca096afad4609d63180b8adf781 https://www.encodeproject.org/files/ENCFF446TZX/@@download/ENCFF446TZX.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF711WGR bed narrowPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF122ECM, ENCFF943DZB 5337686 ENCODE Processing Pipeline 514d305b9f96d7ff1baf02584cc95510 https://www.encodeproject.org/files/ENCFF711WGR/@@download/ENCFF711WGR.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF327PSB bed narrowPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF122ECM, ENCFF281FRR, ENCFF943DZB 5711887 ENCODE Processing Pipeline 9fd898b5bf2afec4fd9d766d9168b9ac https://www.encodeproject.org/files/ENCFF327PSB/@@download/ENCFF327PSB.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF012MMC bigBed narrowPeak peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF327PSB 13203650 ENCODE Processing Pipeline 3070edafb9c5509de8c237c1316642d8 https://www.encodeproject.org/files/ENCFF012MMC/@@download/ENCFF012MMC.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF635YMI bed narrowPeak optimal idr thresholded peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF327PSB, ENCFF419RSJ, ENCFF446TZX, ENCFF711WGR 412215 ENCODE Processing Pipeline cc228b7f113019a06503b2dc60844057 https://www.encodeproject.org/files/ENCFF635YMI/@@download/ENCFF635YMI.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF025EZP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF635YMI 925314 ENCODE Processing Pipeline 45fda9bf61d29c79547bbd329b614075 https://www.encodeproject.org/files/ENCFF025EZP/@@download/ENCFF025EZP.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF222NHS bed narrowPeak conservative idr thresholded peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF327PSB, ENCFF419RSJ, ENCFF446TZX, ENCFF711WGR 316092 ENCODE Processing Pipeline 9bbfe30194e0b73a60e4024b474b05a9 https://www.encodeproject.org/files/ENCFF222NHS/@@download/ENCFF222NHS.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF735FHH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF222NHS 756816 ENCODE Processing Pipeline 85328ef895c58f584c8d9ef64f3f11ee https://www.encodeproject.org/files/ENCFF735FHH/@@download/ENCFF735FHH.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF837CJW fastq reads ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 1 50 single-ended 1474769152 Richard Myers, HAIB 89ee21b642c0f77058acd7f98fe32bd0 SRA:SRR5331450 https://www.encodeproject.org/files/ENCFF837CJW/@@download/ENCFF837CJW.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released low read depth ENCFF945WVN fastq reads ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 1 50 single-ended 1224213428 Richard Myers, HAIB 551bc9f86021cb7c2b3f21b90e5a7235 SRA:SRR5331449 https://www.encodeproject.org/files/ENCFF945WVN/@@download/ENCFF945WVN.fastq.gz HiSeq 2000 /files/ENCFF002BGB/ released low read depth ENCFF267EKF bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF807MUK, ENCFF837CJW 1197006611 ENCODE Processing Pipeline b89de83e8fc571eab5cda8b05ffa831c https://www.encodeproject.org/files/ENCFF267EKF/@@download/ENCFF267EKF.bam hg19 released low read depth ENCFF182CYB bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF807MUK, ENCFF945WVN 990833683 ENCODE Processing Pipeline 0897c9e30bee2316802f4b65e0a57160 https://www.encodeproject.org/files/ENCFF182CYB/@@download/ENCFF182CYB.bam hg19 released low read depth ENCFF139KEU bam unfiltered alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 50 ENCFF807MUK, ENCFF945WVN 1305197221 ENCODE Processing Pipeline 6ce450330426a6292c60241664ff494e https://www.encodeproject.org/files/ENCFF139KEU/@@download/ENCFF139KEU.bam hg19 released low read depth ENCFF388AJM bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 50 ENCFF807MUK, ENCFF837CJW 1197006639 ENCODE Processing Pipeline a39959fe10304481284280185474db1d https://www.encodeproject.org/files/ENCFF388AJM/@@download/ENCFF388AJM.bam hg19 released low read depth ENCFF835NGP bam unfiltered alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 50 ENCFF807MUK, ENCFF837CJW 1570382173 ENCODE Processing Pipeline f7c7710f06d1cd98bea532285423de20 https://www.encodeproject.org/files/ENCFF835NGP/@@download/ENCFF835NGP.bam hg19 released low read depth ENCFF057WPZ bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 50 ENCFF807MUK, ENCFF945WVN 990833712 ENCODE Processing Pipeline 378bea0563dbf50eebfa8eef9303708b https://www.encodeproject.org/files/ENCFF057WPZ/@@download/ENCFF057WPZ.bam hg19 released low read depth ENCFF530FQE bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF023YMB, ENCFF388AJM 652331562 ENCODE Processing Pipeline d651a93a71f509c2602de6e5797e1e9e https://www.encodeproject.org/files/ENCFF530FQE/@@download/ENCFF530FQE.bigWig hg19 released low read depth ENCFF126ZZJ bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF057WPZ, ENCFF092ACZ 606608926 ENCODE Processing Pipeline 4513df82eafa53c70e4cb37e32ff89df https://www.encodeproject.org/files/ENCFF126ZZJ/@@download/ENCFF126ZZJ.bigWig hg19 released low read depth ENCFF702ZXJ bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF023YMB, ENCFF057WPZ, ENCFF092ACZ, ENCFF388AJM 1002237612 ENCODE Processing Pipeline 6743fe3cc50ad82b5cdcd7fbb2b4dd94 https://www.encodeproject.org/files/ENCFF702ZXJ/@@download/ENCFF702ZXJ.bigWig hg19 released low read depth ENCFF652VZZ bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF939VGO 11116183 ENCODE Processing Pipeline a6238b649792c55897d9d4284c9b3415 https://www.encodeproject.org/files/ENCFF652VZZ/@@download/ENCFF652VZZ.bigBed hg19 released low read depth ENCFF826XEI bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF649MHK 13282217 ENCODE Processing Pipeline d681ce5ffc54e7c5b4c196f41bb45381 https://www.encodeproject.org/files/ENCFF826XEI/@@download/ENCFF826XEI.bigBed hg19 released low read depth ENCFF152PKU bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF023YMB, ENCFF388AJM 549601057 ENCODE Processing Pipeline 85fa9b8634833af3985c7c7715b684e2 https://www.encodeproject.org/files/ENCFF152PKU/@@download/ENCFF152PKU.bigWig hg19 released low read depth ENCFF240IEH bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF057WPZ, ENCFF092ACZ 472794917 ENCODE Processing Pipeline aa8cce57d1c3715c09eae1c9360319a1 https://www.encodeproject.org/files/ENCFF240IEH/@@download/ENCFF240IEH.bigWig hg19 released low read depth ENCFF935RWY bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF023YMB, ENCFF388AJM 6270021 ENCODE Processing Pipeline dbc92775e620277e3b12ed79fdb72198 https://www.encodeproject.org/files/ENCFF935RWY/@@download/ENCFF935RWY.bed.gz hg19 released low read depth ENCFF371KUO bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF023YMB, ENCFF057WPZ, ENCFF092ACZ, ENCFF388AJM 1080701487 ENCODE Processing Pipeline f93db66264d53d87c6b94a41670e2ad5 https://www.encodeproject.org/files/ENCFF371KUO/@@download/ENCFF371KUO.bigWig hg19 released low read depth ENCFF939VGO bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF057WPZ, ENCFF092ACZ 5334856 ENCODE Processing Pipeline eff79c853adca22eacf0d0f889aabc8d https://www.encodeproject.org/files/ENCFF939VGO/@@download/ENCFF939VGO.bed.gz hg19 released low read depth ENCFF649MHK bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF023YMB, ENCFF057WPZ, ENCFF092ACZ, ENCFF388AJM 6815016 ENCODE Processing Pipeline 1e97055946a0cdc1b6155530135a8074 https://www.encodeproject.org/files/ENCFF649MHK/@@download/ENCFF649MHK.bed.gz hg19 released low read depth ENCFF997ADV bigBed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF001TDO, ENCFF470MLY 490868 ENCODE Processing Pipeline 72b5778e871ec3306a7bd31b801877c2 https://www.encodeproject.org/files/ENCFF997ADV/@@download/ENCFF997ADV.bigBed hg19 released low read depth ENCFF737YFG bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF935RWY 13058925 ENCODE Processing Pipeline b1816d637fa6c1a2f705949c326ab8e7 https://www.encodeproject.org/files/ENCFF737YFG/@@download/ENCFF737YFG.bigBed hg19 released low read depth ENCFF459ESZ bigBed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF001TDO, ENCFF496CSN 401109 ENCODE Processing Pipeline 10d0a6887f56baf530d97db05f0c9d6b https://www.encodeproject.org/files/ENCFF459ESZ/@@download/ENCFF459ESZ.bigBed hg19 released low read depth ENCFF496CSN bed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF001TDO, ENCFF649MHK, ENCFF935RWY, ENCFF939VGO 196970 ENCODE Processing Pipeline 5879d9de68c11d1bf13234fc432a76b8 https://www.encodeproject.org/files/ENCFF496CSN/@@download/ENCFF496CSN.bed.gz hg19 released low read depth ENCFF470MLY bed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF001TDO, ENCFF649MHK, ENCFF935RWY, ENCFF939VGO 263596 ENCODE Processing Pipeline 4deea444df0f55717f0b9f7d26c0db9b https://www.encodeproject.org/files/ENCFF470MLY/@@download/ENCFF470MLY.bed.gz hg19 released low read depth ENCFF833BLL bam unfiltered alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 50 ENCFF643CGH, ENCFF945WVN 1309278408 ENCODE Processing Pipeline ccd8da4414182b10b33b086557d5cb7b https://www.encodeproject.org/files/ENCFF833BLL/@@download/ENCFF833BLL.bam GRCh38 released low read depth ENCFF665BZJ bam unfiltered alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 50 ENCFF643CGH, ENCFF837CJW 1573285455 ENCODE Processing Pipeline 1c86c8ac828f3b343376d166255a00d9 https://www.encodeproject.org/files/ENCFF665BZJ/@@download/ENCFF665BZJ.bam GRCh38 released low read depth ENCFF502VUK bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 50 ENCFF643CGH, ENCFF945WVN 990487143 ENCODE Processing Pipeline 776ec5ffba48125a1209d1e5f9acd002 https://www.encodeproject.org/files/ENCFF502VUK/@@download/ENCFF502VUK.bam GRCh38 released low read depth ENCFF655OEX bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 50 ENCFF643CGH, ENCFF837CJW 1196518197 ENCODE Processing Pipeline 28498adc3fb4a61e83d1f7ea479c57e8 https://www.encodeproject.org/files/ENCFF655OEX/@@download/ENCFF655OEX.bam GRCh38 released low read depth ENCFF266MVF bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF655OEX, ENCFF709XAA 747864284 ENCODE Processing Pipeline d80dc622b8b2ed308cfb9f6d67e0392a https://www.encodeproject.org/files/ENCFF266MVF/@@download/ENCFF266MVF.bigWig GRCh38 released low read depth ENCFF706DMF bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF285EWB, ENCFF502VUK 539476812 ENCODE Processing Pipeline f67e435a1c0720a1703657aa858bef32 https://www.encodeproject.org/files/ENCFF706DMF/@@download/ENCFF706DMF.bigWig GRCh38 released low read depth ENCFF510BMM bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF285EWB, ENCFF502VUK, ENCFF655OEX, ENCFF709XAA 1105822559 ENCODE Processing Pipeline cf165b4dbb6802ad229f8a598093d238 https://www.encodeproject.org/files/ENCFF510BMM/@@download/ENCFF510BMM.bigWig GRCh38 released low read depth ENCFF714RDN bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF655OEX, ENCFF709XAA 549481833 ENCODE Processing Pipeline e53caee8efdbd0468d71d930272cc4df https://www.encodeproject.org/files/ENCFF714RDN/@@download/ENCFF714RDN.bigWig GRCh38 released low read depth ENCFF211CUZ bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF285EWB, ENCFF502VUK 453709870 ENCODE Processing Pipeline 8e7b941ff2e7c5e7304cd2bd60aec504 https://www.encodeproject.org/files/ENCFF211CUZ/@@download/ENCFF211CUZ.bigWig GRCh38 released low read depth ENCFF205QAK bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF285EWB, ENCFF502VUK, ENCFF655OEX, ENCFF709XAA 1087193107 ENCODE Processing Pipeline e98ec5179a327280c21aad0ec5c30dbb https://www.encodeproject.org/files/ENCFF205QAK/@@download/ENCFF205QAK.bigWig GRCh38 released low read depth ENCFF786NME bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF285EWB, ENCFF502VUK, ENCFF655OEX, ENCFF709XAA 6686514 ENCODE Processing Pipeline 8313c07392a735e4c4825a41653894af https://www.encodeproject.org/files/ENCFF786NME/@@download/ENCFF786NME.bed.gz GRCh38 released low read depth ENCFF183QZB bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF655OEX, ENCFF709XAA 6067722 ENCODE Processing Pipeline 4d460eb19f03963eb9813170043022c0 https://www.encodeproject.org/files/ENCFF183QZB/@@download/ENCFF183QZB.bed.gz GRCh38 released low read depth ENCFF674UBG bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF285EWB, ENCFF502VUK 5142366 ENCODE Processing Pipeline b9435d56291e10aac952795e0061b933 https://www.encodeproject.org/files/ENCFF674UBG/@@download/ENCFF674UBG.bed.gz GRCh38 released low read depth ENCFF055NYF bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF183QZB 13044498 ENCODE Processing Pipeline 7ccdff8f449b91756442a012b069b848 https://www.encodeproject.org/files/ENCFF055NYF/@@download/ENCFF055NYF.bigBed GRCh38 released low read depth ENCFF332FKV bigBed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF768YPD 408205 ENCODE Processing Pipeline 36bbf2c76f4bbab6aa1c50a00a8104c3 https://www.encodeproject.org/files/ENCFF332FKV/@@download/ENCFF332FKV.bigBed GRCh38 released low read depth ENCFF768YPD bed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF183QZB, ENCFF419RSJ, ENCFF674UBG, ENCFF786NME 200845 ENCODE Processing Pipeline 076cba5a53b9d3e8cfedd0606cdc0985 https://www.encodeproject.org/files/ENCFF768YPD/@@download/ENCFF768YPD.bed.gz GRCh38 released low read depth ENCFF467FYE bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF674UBG 11028380 ENCODE Processing Pipeline 007d5e26b684cc019525c53cd5047cc8 https://www.encodeproject.org/files/ENCFF467FYE/@@download/ENCFF467FYE.bigBed GRCh38 released low read depth ENCFF617QSK bed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF183QZB, ENCFF419RSJ, ENCFF674UBG, ENCFF786NME 266336 ENCODE Processing Pipeline 046b782ea7920ad8889abd52fee8102b https://www.encodeproject.org/files/ENCFF617QSK/@@download/ENCFF617QSK.bed.gz GRCh38 released low read depth ENCFF940VXW bigBed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF617QSK 496603 ENCODE Processing Pipeline 94a05286a4eea0a0e1a7fd448f0bf252 https://www.encodeproject.org/files/ENCFF940VXW/@@download/ENCFF940VXW.bigBed GRCh38 released low read depth ENCFF944YCP bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF786NME 13308475 ENCODE Processing Pipeline 10f88ed321156694a5570b216eb10ffe https://www.encodeproject.org/files/ENCFF944YCP/@@download/ENCFF944YCP.bigBed GRCh38 released low read depth ENCFF665CXV fastq reads ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 1 50 single-ended 1584223225 Richard Myers, HAIB ee34101b64221922c7123b4cbeb8d589 SRA:SRR5339580 https://www.encodeproject.org/files/ENCFF665CXV/@@download/ENCFF665CXV.fastq.gz HiSeq 2000 /files/ENCFF400XMH/ released antibody characterized with exemption, low read depth ENCFF946BAN fastq reads ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 1 50 single-ended 1255278551 Richard Myers, HAIB ddbdf8e5a1fa0578843fe8be2b0e7da2 https://www.encodeproject.org/files/ENCFF946BAN/@@download/ENCFF946BAN.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption, low read depth ENCFF713QBG bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF665CXV, ENCFF807MUK 1222977489 ENCODE Processing Pipeline 1ed304cc9bb022d8da175d84b3c11410 https://www.encodeproject.org/files/ENCFF713QBG/@@download/ENCFF713QBG.bam hg19 released antibody characterized with exemption, low read depth ENCFF493UYW bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF807MUK, ENCFF946BAN 932941826 ENCODE Processing Pipeline 4f0f23e754489417db9b990291d358eb https://www.encodeproject.org/files/ENCFF493UYW/@@download/ENCFF493UYW.bam hg19 released antibody characterized with exemption, low read depth ENCFF758UNJ bam unfiltered alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 50 ENCFF643CGH, ENCFF665CXV 1718635019 ENCODE Processing Pipeline c8df0d9856868c9051c089cc23b30924 https://www.encodeproject.org/files/ENCFF758UNJ/@@download/ENCFF758UNJ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF971UIQ bam unfiltered alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 50 ENCFF643CGH, ENCFF946BAN 1342725116 ENCODE Processing Pipeline bf99720421bf0e777eff6a22bb2613db https://www.encodeproject.org/files/ENCFF971UIQ/@@download/ENCFF971UIQ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF382DBE bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 50 ENCFF643CGH, ENCFF665CXV 1223177321 ENCODE Processing Pipeline cbf1ebb9f3d4fc6cea3e4fa3c4f67aff https://www.encodeproject.org/files/ENCFF382DBE/@@download/ENCFF382DBE.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF888AOR bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 50 ENCFF643CGH, ENCFF946BAN 932564663 ENCODE Processing Pipeline c29b68ac34e0bd63f2ea4d09174c1f33 https://www.encodeproject.org/files/ENCFF888AOR/@@download/ENCFF888AOR.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF701SKJ bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF063BAN, ENCFF382DBE 833642095 ENCODE Processing Pipeline 4d3994ec37589ed32815e7b35d4d3f59 https://www.encodeproject.org/files/ENCFF701SKJ/@@download/ENCFF701SKJ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF113NMU bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF332SVJ, ENCFF888AOR 634541586 ENCODE Processing Pipeline d3ba39bf02686ff6194efd171a4f9369 https://www.encodeproject.org/files/ENCFF113NMU/@@download/ENCFF113NMU.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF401SID bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF063BAN, ENCFF382DBE 535867688 ENCODE Processing Pipeline c729b4a88ae986a963a08ace9513a53c https://www.encodeproject.org/files/ENCFF401SID/@@download/ENCFF401SID.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF692LXI bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF063BAN, ENCFF332SVJ, ENCFF382DBE, ENCFF888AOR 1215164739 ENCODE Processing Pipeline 15cc0699b789e312ed9677311bc9ed52 https://www.encodeproject.org/files/ENCFF692LXI/@@download/ENCFF692LXI.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF865QNO bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF332SVJ, ENCFF888AOR 488537011 ENCODE Processing Pipeline 90d58287da5a133c0cce95debbf3cdcb https://www.encodeproject.org/files/ENCFF865QNO/@@download/ENCFF865QNO.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF058NFI bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF063BAN, ENCFF332SVJ, ENCFF382DBE, ENCFF888AOR 1099201356 ENCODE Processing Pipeline 68fe864c22aaa4f0838f3a328fa0a4df https://www.encodeproject.org/files/ENCFF058NFI/@@download/ENCFF058NFI.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF990SRA bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF332SVJ, ENCFF888AOR 6419371 ENCODE Processing Pipeline 0ee4136d06a2513eae8bbc68898ee1cd https://www.encodeproject.org/files/ENCFF990SRA/@@download/ENCFF990SRA.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF670HFC bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF063BAN, ENCFF332SVJ, ENCFF382DBE, ENCFF888AOR 7098085 ENCODE Processing Pipeline ec9952c78441f3ac198de9908e8b0d8c https://www.encodeproject.org/files/ENCFF670HFC/@@download/ENCFF670HFC.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF698PDD bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF990SRA 13060481 ENCODE Processing Pipeline ed0cddf2b95bd8393dff9ebde12512a3 https://www.encodeproject.org/files/ENCFF698PDD/@@download/ENCFF698PDD.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF881HOX bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF670HFC 13263987 ENCODE Processing Pipeline 5e024042e6b34c99d4b2815deaf65b93 https://www.encodeproject.org/files/ENCFF881HOX/@@download/ENCFF881HOX.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF046QEQ bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF063BAN, ENCFF382DBE 6126018 ENCODE Processing Pipeline 544d72f381ce8441b5d3b265945b2c96 https://www.encodeproject.org/files/ENCFF046QEQ/@@download/ENCFF046QEQ.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF743YOX bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF046QEQ 13385105 ENCODE Processing Pipeline b3ad7602db03ada65ad0bf104c1e829c https://www.encodeproject.org/files/ENCFF743YOX/@@download/ENCFF743YOX.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF191MYC bed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF046QEQ, ENCFF419RSJ, ENCFF670HFC, ENCFF990SRA 176306 ENCODE Processing Pipeline 221dcf358f7454630cd40eb494850607 https://www.encodeproject.org/files/ENCFF191MYC/@@download/ENCFF191MYC.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF163FLA bed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF046QEQ, ENCFF419RSJ, ENCFF670HFC, ENCFF990SRA 275708 ENCODE Processing Pipeline c62dfebc3a00c7cd0535bd47ec04a154 https://www.encodeproject.org/files/ENCFF163FLA/@@download/ENCFF163FLA.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF586NQQ bigBed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF191MYC 421179 ENCODE Processing Pipeline 6d73d62dc1bfd8dbfd0ac241c3419abd https://www.encodeproject.org/files/ENCFF586NQQ/@@download/ENCFF586NQQ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF432ZFR bigBed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF163FLA 584395 ENCODE Processing Pipeline 8ad3f9cfa73c3b40faabbc89ce6f34c5 https://www.encodeproject.org/files/ENCFF432ZFR/@@download/ENCFF432ZFR.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF284HTQ bam unfiltered alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 50 ENCFF665CXV, ENCFF807MUK 1710856975 ENCODE Processing Pipeline 540e789e351be00cb6571797c24525bf https://www.encodeproject.org/files/ENCFF284HTQ/@@download/ENCFF284HTQ.bam hg19 released antibody characterized with exemption, low read depth ENCFF997CVO bam unfiltered alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 50 ENCFF807MUK, ENCFF946BAN 1339666498 ENCODE Processing Pipeline 73abeb30ab16f2c60734f48f79cf277c https://www.encodeproject.org/files/ENCFF997CVO/@@download/ENCFF997CVO.bam hg19 released antibody characterized with exemption, low read depth ENCFF476EGJ bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 50 ENCFF665CXV, ENCFF807MUK 1222977518 ENCODE Processing Pipeline c808f5e505d29c48bc3e06918611ee38 https://www.encodeproject.org/files/ENCFF476EGJ/@@download/ENCFF476EGJ.bam hg19 released antibody characterized with exemption, low read depth ENCFF798GLN bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 50 ENCFF807MUK, ENCFF946BAN 932941854 ENCODE Processing Pipeline e04c78fc03112d729e56b6067dd5c447 https://www.encodeproject.org/files/ENCFF798GLN/@@download/ENCFF798GLN.bam hg19 released antibody characterized with exemption, low read depth ENCFF814LTT bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF135TJX 13062200 ENCODE Processing Pipeline 63fd2f363d7bec68ff5f39430572f07b https://www.encodeproject.org/files/ENCFF814LTT/@@download/ENCFF814LTT.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF135ALT bigBed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF740VTJ 333869 ENCODE Processing Pipeline 50f4dd1a44e3fd10e64ac9e5c123d17c https://www.encodeproject.org/files/ENCFF135ALT/@@download/ENCFF135ALT.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF484DKT bed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF001TDO, ENCFF135TJX, ENCFF491AYX, ENCFF908UOT 257946 ENCODE Processing Pipeline 4ef8751c301c235ed067836ca888b02b https://www.encodeproject.org/files/ENCFF484DKT/@@download/ENCFF484DKT.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF670CQZ bigBed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF484DKT 557243 ENCODE Processing Pipeline 1afc306179e4c73457c3cce37a5bf401 https://www.encodeproject.org/files/ENCFF670CQZ/@@download/ENCFF670CQZ.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF016ERH bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF061QOJ, ENCFF798GLN 784261797 ENCODE Processing Pipeline d811814ddc03314c6a6b7b30796ef5bd https://www.encodeproject.org/files/ENCFF016ERH/@@download/ENCFF016ERH.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF135TJX bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF061QOJ, ENCFF798GLN 6448558 ENCODE Processing Pipeline fe994e22e5535e903c5d1b003e19c321 https://www.encodeproject.org/files/ENCFF135TJX/@@download/ENCFF135TJX.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF908UOT bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF061QOJ, ENCFF227XXD, ENCFF476EGJ, ENCFF798GLN 7071954 ENCODE Processing Pipeline f23079c4c92c24d44c132d688663e3f5 https://www.encodeproject.org/files/ENCFF908UOT/@@download/ENCFF908UOT.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF843TPP bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF227XXD, ENCFF476EGJ 796755153 ENCODE Processing Pipeline 393b2eab317cdf415ce40ec7c8c3df8e https://www.encodeproject.org/files/ENCFF843TPP/@@download/ENCFF843TPP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF985MBQ bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF227XXD, ENCFF476EGJ 539444918 ENCODE Processing Pipeline 9ac181a6cdfcd0537310e4bd6e6e4b08 https://www.encodeproject.org/files/ENCFF985MBQ/@@download/ENCFF985MBQ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF779XVG bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF061QOJ, ENCFF227XXD, ENCFF476EGJ, ENCFF798GLN 1319242479 ENCODE Processing Pipeline 462f8ca41d0ab6598d72ce934e7738d2 https://www.encodeproject.org/files/ENCFF779XVG/@@download/ENCFF779XVG.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF824OMP bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF061QOJ, ENCFF798GLN 446286079 ENCODE Processing Pipeline 68e6d2f2f20ac9b2a072385ed4c3a5d5 https://www.encodeproject.org/files/ENCFF824OMP/@@download/ENCFF824OMP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF762MAM bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF061QOJ, ENCFF227XXD, ENCFF476EGJ, ENCFF798GLN 1085683293 ENCODE Processing Pipeline 575de9171f2dc30c44e5e472772263ef https://www.encodeproject.org/files/ENCFF762MAM/@@download/ENCFF762MAM.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF491AYX bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF227XXD, ENCFF476EGJ 6115452 ENCODE Processing Pipeline dda65365ecde455a4549c284db4677e3 https://www.encodeproject.org/files/ENCFF491AYX/@@download/ENCFF491AYX.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF088DLY bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF491AYX 13348674 ENCODE Processing Pipeline 764cbffa4b0bdb61befe3011177a48d2 https://www.encodeproject.org/files/ENCFF088DLY/@@download/ENCFF088DLY.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF125KZN bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF908UOT 13206413 ENCODE Processing Pipeline 25c32a72f5d0e95a3d010a020d09988a https://www.encodeproject.org/files/ENCFF125KZN/@@download/ENCFF125KZN.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF740VTJ bed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF001TDO, ENCFF135TJX, ENCFF491AYX, ENCFF908UOT 165903 ENCODE Processing Pipeline 55a46c61ae40dbfeefbf981ed442e630 https://www.encodeproject.org/files/ENCFF740VTJ/@@download/ENCFF740VTJ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF000RGJ bam alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RGV 939427019 Richard Myers, HAIB c477cec97dcb67a194e0bcb4cda3970b https://www.encodeproject.org/files/ENCFF000RGJ/@@download/ENCFF000RGJ.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RGK bigBed broadPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UQZ 538487 Richard Myers, HAIB e267db7b5e7cba2a4cfdee492da9dfa8 https://www.encodeproject.org/files/ENCFF000RGK/@@download/ENCFF000RGK.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RGL bigBed broadPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001URA 667567 Richard Myers, HAIB d6e31d8648abfea04c44fe5fd891fdef https://www.encodeproject.org/files/ENCFF000RGL/@@download/ENCFF000RGL.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RGN bam alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RGY 1351377109 Richard Myers, HAIB 543c11af5a13936a50c98d991030dec5 https://www.encodeproject.org/files/ENCFF000RGN/@@download/ENCFF000RGN.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RGO bigWig raw signal ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 18804694 Richard Myers, HAIB 6d7b48486f3c29f993cc23356a568699 https://www.encodeproject.org/files/ENCFF000RGO/@@download/ENCFF000RGO.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RGP bigWig raw signal ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 28706328 Richard Myers, HAIB c7827f612dc0924e32af3ee8017debf7 https://www.encodeproject.org/files/ENCFF000RGP/@@download/ENCFF000RGP.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RGV fastq reads ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 822686450 Richard Myers, HAIB 24f1ddbefbd9c9a375504d5b9f663d4f https://www.encodeproject.org/files/ENCFF000RGV/@@download/ENCFF000RGV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RGI/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RGY fastq reads ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1285697417 Richard Myers, HAIB f5ff5781c7f85099b06856ca365705f2 https://www.encodeproject.org/files/ENCFF000RGY/@@download/ENCFF000RGY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RGI/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UQZ bed broadPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 298036 Richard Myers, HAIB 40c184eb9f75b597615b156980d819fa https://www.encodeproject.org/files/ENCFF001UQZ/@@download/ENCFF001UQZ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001URA bed broadPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 394302 Richard Myers, HAIB 28b8958ce2ead1c799988dc48717130f https://www.encodeproject.org/files/ENCFF001URA/@@download/ENCFF001URA.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CNS bed narrowPeak optimal idr thresholded peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 382176 ENCODE Consortium Analysis Working Group 47f8ab33c05f0a60dc591d3254061600 https://www.encodeproject.org/files/ENCFF002CNS/@@download/ENCFF002CNS.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF433EZP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE ENCFF002CNS 958708 ENCODE Consortium a2c52390bb2ca480e57940465b89483f https://www.encodeproject.org/files/ENCFF433EZP/@@download/ENCFF433EZP.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF621QHK bam unfiltered alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGV, ENCFF643CGH 1106576973 ENCODE Processing Pipeline 7ebba7501bf508154a2e3db0af86abd5 https://www.encodeproject.org/files/ENCFF621QHK/@@download/ENCFF621QHK.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF660NOK bam alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGV, ENCFF643CGH 713466645 ENCODE Processing Pipeline eb4b75e7a65dcf614e3e40dabffc4381 https://www.encodeproject.org/files/ENCFF660NOK/@@download/ENCFF660NOK.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF382TBW bam alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGY, ENCFF643CGH 1029173377 ENCODE Processing Pipeline 6460694c47a81f369c7dcbc8fecc43bb https://www.encodeproject.org/files/ENCFF382TBW/@@download/ENCFF382TBW.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF258QFE bam unfiltered alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGY, ENCFF643CGH 1656769750 ENCODE Processing Pipeline 3960cc8bc68b44199522a01543df5755 https://www.encodeproject.org/files/ENCFF258QFE/@@download/ENCFF258QFE.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF795LLU bam unfiltered alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGV, ENCFF807MUK 1102890553 ENCODE Processing Pipeline b32ec66ed80b6104aa6aadeaddf57b4e https://www.encodeproject.org/files/ENCFF795LLU/@@download/ENCFF795LLU.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF770MRP bam alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGV, ENCFF807MUK 713855007 ENCODE Processing Pipeline c2eb752fe5783c66a214f6bd64fbfd25 https://www.encodeproject.org/files/ENCFF770MRP/@@download/ENCFF770MRP.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF175LQE bam unfiltered alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGY, ENCFF807MUK 1650888420 ENCODE Processing Pipeline 0e9fbd812b324b626a78107d0986da5a https://www.encodeproject.org/files/ENCFF175LQE/@@download/ENCFF175LQE.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF374UFJ bam alignments ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGY, ENCFF807MUK 1029550955 ENCODE Processing Pipeline 073a44dafbc2800c41da127dc15b1860 https://www.encodeproject.org/files/ENCFF374UFJ/@@download/ENCFF374UFJ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF402XAG bigWig signal p-value ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF382TBW 496416258 ENCODE Processing Pipeline 48d1d5aa6a44548a4521d89f6653f060 https://www.encodeproject.org/files/ENCFF402XAG/@@download/ENCFF402XAG.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF400TAQ bigWig signal p-value ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF660NOK 421337341 ENCODE Processing Pipeline 0faac804f5b811b1f356acc872d8b4ec https://www.encodeproject.org/files/ENCFF400TAQ/@@download/ENCFF400TAQ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF823PZG bigWig signal p-value ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF382TBW, ENCFF660NOK 522812908 ENCODE Processing Pipeline e5be58e0fb15ab36943c8027892013a7 https://www.encodeproject.org/files/ENCFF823PZG/@@download/ENCFF823PZG.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF183SML bigWig fold change over control ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF382TBW, ENCFF660NOK 686306468 ENCODE Processing Pipeline 3b5a70f6931f3cad6b908768810db805 https://www.encodeproject.org/files/ENCFF183SML/@@download/ENCFF183SML.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF369COI bigWig fold change over control ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF660NOK 353086745 ENCODE Processing Pipeline 9376fd59267744b87131581bdf5a916f https://www.encodeproject.org/files/ENCFF369COI/@@download/ENCFF369COI.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF101WMO bigWig fold change over control ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF382TBW 460353884 ENCODE Processing Pipeline f1d3ded7ee54ab387680a99ff6ac2b50 https://www.encodeproject.org/files/ENCFF101WMO/@@download/ENCFF101WMO.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF987WBU bigBed narrowPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077SAB 10995687 ENCODE Processing Pipeline 3366c931d045d61da5cc403d5217e362 https://www.encodeproject.org/files/ENCFF987WBU/@@download/ENCFF987WBU.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF077SAB bed narrowPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF660NOK 5148454 ENCODE Processing Pipeline 5a1c844faa807af1bd9a4f7c0690183b https://www.encodeproject.org/files/ENCFF077SAB/@@download/ENCFF077SAB.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF690TOW bed narrowPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF382TBW, ENCFF660NOK 6223019 ENCODE Processing Pipeline a757d44af0f209e0b1e94fe9e81435d5 https://www.encodeproject.org/files/ENCFF690TOW/@@download/ENCFF690TOW.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF525HYS bed narrowPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF382TBW 5514044 ENCODE Processing Pipeline d3ab8086cd02d2edbd31589fabcf48d1 https://www.encodeproject.org/files/ENCFF525HYS/@@download/ENCFF525HYS.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF122RTT bigBed narrowPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF525HYS 13310354 ENCODE Processing Pipeline 1d3dda006de8de3a38481b1beaf63403 https://www.encodeproject.org/files/ENCFF122RTT/@@download/ENCFF122RTT.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF755GZM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF276FAU 703631 ENCODE Processing Pipeline bd8e01897fe7fdf3a5e3a208b006166d https://www.encodeproject.org/files/ENCFF755GZM/@@download/ENCFF755GZM.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF128AGL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF363UWP 729711 ENCODE Processing Pipeline 610e15b3c41d0d2a1b6907dda777822e https://www.encodeproject.org/files/ENCFF128AGL/@@download/ENCFF128AGL.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF363UWP bed narrowPeak optimal idr thresholded peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077SAB, ENCFF419RSJ, ENCFF525HYS, ENCFF690TOW 403936 ENCODE Processing Pipeline f9cde27ff4b881bbfe880af72eec2f12 https://www.encodeproject.org/files/ENCFF363UWP/@@download/ENCFF363UWP.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF511QAN bigBed narrowPeak peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF690TOW 13590858 ENCODE Processing Pipeline 2381fd876afa96f13c1350e7af6bbd15 https://www.encodeproject.org/files/ENCFF511QAN/@@download/ENCFF511QAN.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF276FAU bed narrowPeak conservative idr thresholded peaks ENCSR000BLZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077SAB, ENCFF419RSJ, ENCFF525HYS, ENCFF690TOW 386150 ENCODE Processing Pipeline 75c373da02150f33692fc8ffb21782e4 https://www.encodeproject.org/files/ENCFF276FAU/@@download/ENCFF276FAU.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF898YVQ fastq reads ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 1 50 single-ended 1089441455 Richard Myers, HAIB c72fc2f0d82bed2984f7d2303aa6cfcb SRA:SRR5338645 https://www.encodeproject.org/files/ENCFF898YVQ/@@download/ENCFF898YVQ.fastq.gz HiSeq 2000 /files/ENCFF484RXR/ released low read depth missing unfiltered alignments partially characterized antibody ENCFF211BUP fastq reads ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 1 50 single-ended 878927804 Richard Myers, HAIB 70f090d0af98ddae984ff7285cca81d7 SRA:SRR5338646 https://www.encodeproject.org/files/ENCFF211BUP/@@download/ENCFF211BUP.fastq.gz HiSeq 2000 /files/ENCFF252PYF/ released low read depth missing unfiltered alignments partially characterized antibody ENCFF778QKS bam alignments ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 50 ENCFF807MUK, ENCFF898YVQ 953388380 ENCODE Processing Pipeline b4747c161ca790813e3b899d872fee3b https://www.encodeproject.org/files/ENCFF778QKS/@@download/ENCFF778QKS.bam hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF773JVR bam alignments ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 50 ENCFF211BUP, ENCFF807MUK 763649961 ENCODE Processing Pipeline 0b56ebdeb4d3b883cabb3100e0154fec https://www.encodeproject.org/files/ENCFF773JVR/@@download/ENCFF773JVR.bam hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF890HJH bigWig signal p-value ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 ENCFF017YFK, ENCFF778QKS 629194363 ENCODE Processing Pipeline dfc9158d5d95d881cb9250f743d9b59b https://www.encodeproject.org/files/ENCFF890HJH/@@download/ENCFF890HJH.bigWig hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF919VDD bigWig signal p-value ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF017YFK, ENCFF773JVR, ENCFF778QKS, ENCFF956QBZ 965889598 ENCODE Processing Pipeline abd5bf64cc2881ac7ebd91b44cc18d72 https://www.encodeproject.org/files/ENCFF919VDD/@@download/ENCFF919VDD.bigWig hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF239TZH bigWig signal p-value ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 ENCFF773JVR, ENCFF956QBZ 426270505 ENCODE Processing Pipeline 5b54b504552b36312b7d987b7c848586 https://www.encodeproject.org/files/ENCFF239TZH/@@download/ENCFF239TZH.bigWig hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF433CWQ bigWig fold change over control ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 ENCFF773JVR, ENCFF956QBZ 330441710 ENCODE Processing Pipeline 0644e9fec4280f9e09e1ae4b72ddba81 https://www.encodeproject.org/files/ENCFF433CWQ/@@download/ENCFF433CWQ.bigWig hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF624PGT bigWig fold change over control ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 ENCFF017YFK, ENCFF778QKS 405357927 ENCODE Processing Pipeline 450d059d6d6d38af6a3bb909ba260d94 https://www.encodeproject.org/files/ENCFF624PGT/@@download/ENCFF624PGT.bigWig hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF430AFG bigBed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 ENCFF263YLX 12650468 ENCODE Processing Pipeline 879da7cb8b94391605254a5da85fc22c https://www.encodeproject.org/files/ENCFF430AFG/@@download/ENCFF430AFG.bigBed hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF618FBU bed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 ENCFF017YFK, ENCFF778QKS 6474544 ENCODE Processing Pipeline 3e79ba93fd8141123efa25622e40714d https://www.encodeproject.org/files/ENCFF618FBU/@@download/ENCFF618FBU.bed.gz hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF140EHF bigWig fold change over control ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF017YFK, ENCFF773JVR, ENCFF778QKS, ENCFF956QBZ 785583806 ENCODE Processing Pipeline 3770480dbf275f79b89905842b7f0a01 https://www.encodeproject.org/files/ENCFF140EHF/@@download/ENCFF140EHF.bigWig hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF171YNB bed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF017YFK, ENCFF773JVR, ENCFF778QKS, ENCFF956QBZ 7021232 ENCODE Processing Pipeline 04216611ece5f8fe19fb78b3a01656be https://www.encodeproject.org/files/ENCFF171YNB/@@download/ENCFF171YNB.bed.gz hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF059CJC bigBed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 ENCFF618FBU 12601971 ENCODE Processing Pipeline dfa7594b98c41f56b2a1d35e88925751 https://www.encodeproject.org/files/ENCFF059CJC/@@download/ENCFF059CJC.bigBed hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF906CBH bigBed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF171YNB 12525076 ENCODE Processing Pipeline ecc672d3899242168cb37873fd9b8171 https://www.encodeproject.org/files/ENCFF906CBH/@@download/ENCFF906CBH.bigBed hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF263YLX bed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 ENCFF773JVR, ENCFF956QBZ 6232967 ENCODE Processing Pipeline 42f6213ed26eca9dab6e123818cfbbeb https://www.encodeproject.org/files/ENCFF263YLX/@@download/ENCFF263YLX.bed.gz hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF815UJE bam unfiltered alignments ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 50 ENCFF211BUP, ENCFF643CGH 973581067 ENCODE Processing Pipeline 1c210e7483f2379b5b76b75982c432b3 https://www.encodeproject.org/files/ENCFF815UJE/@@download/ENCFF815UJE.bam GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF122VCH bam alignments ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 50 ENCFF211BUP, ENCFF643CGH 763401977 ENCODE Processing Pipeline 033aab42fa144b50216773ac077250a0 https://www.encodeproject.org/files/ENCFF122VCH/@@download/ENCFF122VCH.bam GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF852FHU bam unfiltered alignments ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 50 ENCFF643CGH, ENCFF898YVQ 1202042668 ENCODE Processing Pipeline ca3c3d6d8cad34dc085d9d1b612625c4 https://www.encodeproject.org/files/ENCFF852FHU/@@download/ENCFF852FHU.bam GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF591JSM bam alignments ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 50 ENCFF643CGH, ENCFF898YVQ 953123176 ENCODE Processing Pipeline 8f8ad10ad22a6bf5105768f6dd6d2fc4 https://www.encodeproject.org/files/ENCFF591JSM/@@download/ENCFF591JSM.bam GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF833YOX bigWig signal p-value ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 ENCFF591JSM, ENCFF982GQU 634294474 ENCODE Processing Pipeline 21ab5107dca845db980bd6fead1dbb5f https://www.encodeproject.org/files/ENCFF833YOX/@@download/ENCFF833YOX.bigWig GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF218COB bigWig signal p-value ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 ENCFF122VCH, ENCFF341IVK 544441405 ENCODE Processing Pipeline 7533ba143bc5f877b4944ca3a9fb0608 https://www.encodeproject.org/files/ENCFF218COB/@@download/ENCFF218COB.bigWig GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF988GOB bigWig signal p-value ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF122VCH, ENCFF341IVK, ENCFF591JSM, ENCFF982GQU 791960466 ENCODE Processing Pipeline 9d9aba695a0d60f4f058b4a69d3c6853 https://www.encodeproject.org/files/ENCFF988GOB/@@download/ENCFF988GOB.bigWig GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF455JXT bigWig fold change over control ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 ENCFF591JSM, ENCFF982GQU 411889800 ENCODE Processing Pipeline ce79698c5440f3d53eda5a23f98b25b6 https://www.encodeproject.org/files/ENCFF455JXT/@@download/ENCFF455JXT.bigWig GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF877ROF bigWig fold change over control ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 ENCFF122VCH, ENCFF341IVK 328548634 ENCODE Processing Pipeline 4341e5e98f620043a1309483afe5160b https://www.encodeproject.org/files/ENCFF877ROF/@@download/ENCFF877ROF.bigWig GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF170YDM bigWig fold change over control ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF122VCH, ENCFF341IVK, ENCFF591JSM, ENCFF982GQU 804804710 ENCODE Processing Pipeline f89cec93acbe36a3e62da8f2fb5e1127 https://www.encodeproject.org/files/ENCFF170YDM/@@download/ENCFF170YDM.bigWig GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF913TST bed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 ENCFF122VCH, ENCFF341IVK 6038348 ENCODE Processing Pipeline bbe989a2003c10d31430b492e098e596 https://www.encodeproject.org/files/ENCFF913TST/@@download/ENCFF913TST.bed.gz GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF608SAA bed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF122VCH, ENCFF341IVK, ENCFF591JSM, ENCFF982GQU 6974963 ENCODE Processing Pipeline 772fb4f4e9dc4748504db79c8e0b66e8 https://www.encodeproject.org/files/ENCFF608SAA/@@download/ENCFF608SAA.bed.gz GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF920OTS bigBed narrowPeak optimal idr thresholded peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF516QUC 1010022 ENCODE Processing Pipeline e2073c89cee3553183fe0cb3a151b307 https://www.encodeproject.org/files/ENCFF920OTS/@@download/ENCFF920OTS.bigBed GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF080WBH bigBed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF608SAA 12537346 ENCODE Processing Pipeline eb13750c9d7e1a8d8f741922eff2c601 https://www.encodeproject.org/files/ENCFF080WBH/@@download/ENCFF080WBH.bigBed GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF399EAI bed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 ENCFF591JSM, ENCFF982GQU 6366938 ENCODE Processing Pipeline 9af86459b95458219c59126e4163da00 https://www.encodeproject.org/files/ENCFF399EAI/@@download/ENCFF399EAI.bed.gz GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF829VUH bigBed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1 ENCFF399EAI 12619745 ENCODE Processing Pipeline 7a4307eaba38a1b96c7852a8b54795ee https://www.encodeproject.org/files/ENCFF829VUH/@@download/ENCFF829VUH.bigBed GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF608OQO bigBed narrowPeak peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 2 ENCFF913TST 12621175 ENCODE Processing Pipeline 5536677afe98077b47442e1044da41e3 https://www.encodeproject.org/files/ENCFF608OQO/@@download/ENCFF608OQO.bigBed GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF516QUC bed narrowPeak optimal idr thresholded peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF399EAI, ENCFF419RSJ, ENCFF608SAA, ENCFF913TST 496920 ENCODE Processing Pipeline 63f4d4e413071de2bd748c615b5762c9 https://www.encodeproject.org/files/ENCFF516QUC/@@download/ENCFF516QUC.bed.gz GRCh38 released low read depth missing unfiltered alignments partially characterized antibody ENCFF822TCG bigBed narrowPeak conservative idr thresholded peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF903OKN 962156 ENCODE Processing Pipeline 93d7f50cda2ad1d6b5029084d8705ffb https://www.encodeproject.org/files/ENCFF822TCG/@@download/ENCFF822TCG.bigBed hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF523JXM bigBed narrowPeak optimal idr thresholded peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF690DDP 1002488 ENCODE Processing Pipeline 7a6c154aa4d9362eb6f35e57ffb56716 https://www.encodeproject.org/files/ENCFF523JXM/@@download/ENCFF523JXM.bigBed hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF903OKN bed narrowPeak conservative idr thresholded peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF001TDO, ENCFF171YNB, ENCFF263YLX, ENCFF618FBU 460341 ENCODE Processing Pipeline b23b625c65b75377136037732bae84b9 https://www.encodeproject.org/files/ENCFF903OKN/@@download/ENCFF903OKN.bed.gz hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF690DDP bed narrowPeak optimal idr thresholded peaks ENCSR369NGL ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-08-09 ENCODE 1, 2 ENCFF001TDO, ENCFF171YNB, ENCFF263YLX, ENCFF618FBU 490398 ENCODE Processing Pipeline 6707f2d1389cc2c8e7c8e9d240c4bfbf https://www.encodeproject.org/files/ENCFF690DDP/@@download/ENCFF690DDP.bed.gz hg19 released low read depth missing unfiltered alignments partially characterized antibody ENCFF986KEK fastq reads ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 1 50 single-ended 856236553 Richard Myers, HAIB e0831568ddcc307c2f3114025318c62a SRA:SRR5331562 https://www.encodeproject.org/files/ENCFF986KEK/@@download/ENCFF986KEK.fastq.gz HiSeq 2000 /files/ENCFF252PYF/ released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF647APA fastq reads ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 1 50 single-ended 1055296765 Richard Myers, HAIB c9c2ea77bb031b70d6d7dea6c3b36dbd SRA:SRR5331563 https://www.encodeproject.org/files/ENCFF647APA/@@download/ENCFF647APA.fastq.gz HiSeq 2000 /files/ENCFF484RXR/ released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF964YHS bam alignments ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 50 ENCFF807MUK, ENCFF986KEK 768291967 ENCODE Processing Pipeline ca9028d9e8a6f93d2e00fa1436349d5e https://www.encodeproject.org/files/ENCFF964YHS/@@download/ENCFF964YHS.bam hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF654GAA bam alignments ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 50 ENCFF647APA, ENCFF807MUK 973545935 ENCODE Processing Pipeline 9b59112807ab44ae5bcb159edc9c7637 https://www.encodeproject.org/files/ENCFF654GAA/@@download/ENCFF654GAA.bam hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF392ILP bigWig signal p-value ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 ENCFF017YFK, ENCFF654GAA 503608687 ENCODE Processing Pipeline 5530108173fd4138e323a19eb36f526d https://www.encodeproject.org/files/ENCFF392ILP/@@download/ENCFF392ILP.bigWig hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF974GFI bigWig signal p-value ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 ENCFF956QBZ, ENCFF964YHS 517604123 ENCODE Processing Pipeline cc7e8cdc7081a9cd7c1e58de01d99347 https://www.encodeproject.org/files/ENCFF974GFI/@@download/ENCFF974GFI.bigWig hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF010EQD bigWig signal p-value ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF017YFK, ENCFF654GAA, ENCFF956QBZ, ENCFF964YHS 1025928692 ENCODE Processing Pipeline 4cfa567c7e909ce5ed17bdd20df6c52a https://www.encodeproject.org/files/ENCFF010EQD/@@download/ENCFF010EQD.bigWig hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF233HLR bigWig fold change over control ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 ENCFF017YFK, ENCFF654GAA 424638170 ENCODE Processing Pipeline ae306c80ef11f8775b4f329e580f3361 https://www.encodeproject.org/files/ENCFF233HLR/@@download/ENCFF233HLR.bigWig hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF288ABD bigWig fold change over control ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 ENCFF956QBZ, ENCFF964YHS 345983568 ENCODE Processing Pipeline b9eb18e6ec4edee284534bb319dbcbd3 https://www.encodeproject.org/files/ENCFF288ABD/@@download/ENCFF288ABD.bigWig hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF587SQF bigWig fold change over control ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF017YFK, ENCFF654GAA, ENCFF956QBZ, ENCFF964YHS 837791304 ENCODE Processing Pipeline 0791f7ca168b577cce268619d291c8ef https://www.encodeproject.org/files/ENCFF587SQF/@@download/ENCFF587SQF.bigWig hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF969HTA bed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 ENCFF017YFK, ENCFF654GAA 4919201 ENCODE Processing Pipeline a6c06e33ccec7b7897bd661361e841cf https://www.encodeproject.org/files/ENCFF969HTA/@@download/ENCFF969HTA.bed.gz hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF626GQM bigBed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF598PVZ 11574581 ENCODE Processing Pipeline 0ebdf5b24be8cac452bae27140ac88b2 https://www.encodeproject.org/files/ENCFF626GQM/@@download/ENCFF626GQM.bigBed hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF534BVF bigBed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 ENCFF969HTA 11268810 ENCODE Processing Pipeline eee7d5bfe215e804be0885999192d248 https://www.encodeproject.org/files/ENCFF534BVF/@@download/ENCFF534BVF.bigBed hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF718TIR bigBed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 ENCFF132GYY 11134682 ENCODE Processing Pipeline 3676cf80e7e3ac58d6a72bbbc0c8e67c https://www.encodeproject.org/files/ENCFF718TIR/@@download/ENCFF718TIR.bigBed hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF132GYY bed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 ENCFF956QBZ, ENCFF964YHS 4917436 ENCODE Processing Pipeline e365c57b89ba2e09737b2f7fd3299a31 https://www.encodeproject.org/files/ENCFF132GYY/@@download/ENCFF132GYY.bed.gz hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF598PVZ bed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF017YFK, ENCFF654GAA, ENCFF956QBZ, ENCFF964YHS 6121024 ENCODE Processing Pipeline baff9b7f0ce2d2ccc753f7a5c7f6684a https://www.encodeproject.org/files/ENCFF598PVZ/@@download/ENCFF598PVZ.bed.gz hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF816KPQ bam unfiltered alignments ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 50 ENCFF643CGH, ENCFF986KEK 985374580 ENCODE Processing Pipeline 32c765f4f2ed5db7b9a0078f1a9610be https://www.encodeproject.org/files/ENCFF816KPQ/@@download/ENCFF816KPQ.bam GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF624WCF bam unfiltered alignments ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 50 ENCFF643CGH, ENCFF647APA 1214394790 ENCODE Processing Pipeline 0e67fa6108e5d61979f82d3239cf3415 https://www.encodeproject.org/files/ENCFF624WCF/@@download/ENCFF624WCF.bam GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF582ZOC bam alignments ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 50 ENCFF643CGH, ENCFF986KEK 768141068 ENCODE Processing Pipeline 6c98000f6e16138e45932e941985a4c4 https://www.encodeproject.org/files/ENCFF582ZOC/@@download/ENCFF582ZOC.bam GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF720OTS bam alignments ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 50 ENCFF643CGH, ENCFF647APA 973458834 ENCODE Processing Pipeline db339a288ebd87476cee2a77d5b78c6c https://www.encodeproject.org/files/ENCFF720OTS/@@download/ENCFF720OTS.bam GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF758PON bigWig signal p-value ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 ENCFF720OTS, ENCFF982GQU 534605745 ENCODE Processing Pipeline 681840ae21a9ade58f1180fc51be79b1 https://www.encodeproject.org/files/ENCFF758PON/@@download/ENCFF758PON.bigWig GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF656IGP bigWig signal p-value ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 ENCFF341IVK, ENCFF582ZOC 427454624 ENCODE Processing Pipeline 1e5eabb8f8a551686e01121af32642a9 https://www.encodeproject.org/files/ENCFF656IGP/@@download/ENCFF656IGP.bigWig GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF276VXR bigWig signal p-value ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF341IVK, ENCFF582ZOC, ENCFF720OTS, ENCFF982GQU 896117014 ENCODE Processing Pipeline e4038fd72cf53e794589b96a2cfb16e7 https://www.encodeproject.org/files/ENCFF276VXR/@@download/ENCFF276VXR.bigWig GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF732CMZ bigWig fold change over control ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 ENCFF720OTS, ENCFF982GQU 432158438 ENCODE Processing Pipeline ad8f42f917cf8a09426b15d1e506767b https://www.encodeproject.org/files/ENCFF732CMZ/@@download/ENCFF732CMZ.bigWig GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF436BLC bigWig fold change over control ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 ENCFF341IVK, ENCFF582ZOC 336422787 ENCODE Processing Pipeline 2fade47700943b5a9c799dea0fefefcc https://www.encodeproject.org/files/ENCFF436BLC/@@download/ENCFF436BLC.bigWig GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF058VKQ bigWig fold change over control ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF341IVK, ENCFF582ZOC, ENCFF720OTS, ENCFF982GQU 839354112 ENCODE Processing Pipeline df9df73b9907a691c310365f8d34e085 https://www.encodeproject.org/files/ENCFF058VKQ/@@download/ENCFF058VKQ.bigWig GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF637CFC bed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 ENCFF720OTS, ENCFF982GQU 4692517 ENCODE Processing Pipeline 0b80fdc3ab52cda7538225b4ab2198e8 https://www.encodeproject.org/files/ENCFF637CFC/@@download/ENCFF637CFC.bed.gz GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF571PCH bed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 ENCFF341IVK, ENCFF582ZOC 4679404 ENCODE Processing Pipeline 76c7eb257a8cb8b15545be3b86e73da0 https://www.encodeproject.org/files/ENCFF571PCH/@@download/ENCFF571PCH.bed.gz GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF214WRX bigBed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1 ENCFF637CFC 11122564 ENCODE Processing Pipeline 09f94749c3d8e4e5689d88e634ce1519 https://www.encodeproject.org/files/ENCFF214WRX/@@download/ENCFF214WRX.bigBed GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF774BKW bed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF341IVK, ENCFF582ZOC, ENCFF720OTS, ENCFF982GQU 5861943 ENCODE Processing Pipeline dc946900afd0009f54100e2c6ae3dc3c https://www.encodeproject.org/files/ENCFF774BKW/@@download/ENCFF774BKW.bed.gz GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF423PMS bigBed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 2 ENCFF571PCH 10902736 ENCODE Processing Pipeline a3ec5cf20059d2b601d7496f3307429c https://www.encodeproject.org/files/ENCFF423PMS/@@download/ENCFF423PMS.bigBed GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF425KXW bed narrowPeak optimal idr thresholded peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF571PCH, ENCFF637CFC, ENCFF774BKW 107304 ENCODE Processing Pipeline 912dca14d06c3859fc66f1a5783e5047 https://www.encodeproject.org/files/ENCFF425KXW/@@download/ENCFF425KXW.bed.gz GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF726DRN bigBed narrowPeak peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF774BKW 11553721 ENCODE Processing Pipeline e4479796431810d965d1fe0e6dde03cb https://www.encodeproject.org/files/ENCFF726DRN/@@download/ENCFF726DRN.bigBed GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF497JBZ bigBed narrowPeak optimal idr thresholded peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF425KXW 228144 ENCODE Processing Pipeline 61ac6299a442f816da06c0d25e29aa1e https://www.encodeproject.org/files/ENCFF497JBZ/@@download/ENCFF497JBZ.bigBed GRCh38 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF046WLI bed narrowPeak optimal idr thresholded peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF001TDO, ENCFF132GYY, ENCFF598PVZ, ENCFF969HTA 118721 ENCODE Processing Pipeline f6ed66919a91beb16dcee1ffdd1e497e https://www.encodeproject.org/files/ENCFF046WLI/@@download/ENCFF046WLI.bed.gz hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF857YPI bed narrowPeak conservative idr thresholded peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF001TDO, ENCFF132GYY, ENCFF598PVZ, ENCFF969HTA 94674 ENCODE Processing Pipeline 8a4beb666a6c5a81d045412005e0c311 https://www.encodeproject.org/files/ENCFF857YPI/@@download/ENCFF857YPI.bed.gz hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF574CLO bigBed narrowPeak conservative idr thresholded peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF857YPI 210012 ENCODE Processing Pipeline afc449e677bf74cb2eb6edc23a1d8a4c https://www.encodeproject.org/files/ENCFF574CLO/@@download/ENCFF574CLO.bigBed hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF711NGY bigBed narrowPeak optimal idr thresholded peaks ENCSR264RJX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens POU5F1-human ENCAB000AKD DNA False 2016-06-16 ENCODE 1, 2 ENCFF046WLI 241995 ENCODE Processing Pipeline c4c07192ec7d6ef59170d133016b3322 https://www.encodeproject.org/files/ENCFF711NGY/@@download/ENCFF711NGY.bigBed hg19 released low read depth missing unfiltered alignments, biological replicates with identical biosample partially characterized antibody ENCFF000PQX bam alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PRJ 467234698 Richard Myers, HAIB 1e820df8f2c772ee106f40bc00310d8e https://www.encodeproject.org/files/ENCFF000PQX/@@download/ENCFF000PQX.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF000PQY bigBed broadPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHU 358070 Richard Myers, HAIB 185b31f1ac121ef85cfc391d8b8fae79 https://www.encodeproject.org/files/ENCFF000PQY/@@download/ENCFF000PQY.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF000PQZ bigBed broadPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHV 86733 Richard Myers, HAIB 63b0bd6b0a71f50c56556c484af156a7 https://www.encodeproject.org/files/ENCFF000PQZ/@@download/ENCFF000PQZ.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF000PRA bam alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PRL 1139296083 Richard Myers, HAIB b602808eeb55cc677c5b1f2ce42fee4c https://www.encodeproject.org/files/ENCFF000PRA/@@download/ENCFF000PRA.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF000PRC bigWig raw signal ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 22985707 Richard Myers, HAIB 8dde100dfe5e221b3c149f92df04d666 https://www.encodeproject.org/files/ENCFF000PRC/@@download/ENCFF000PRC.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000PRE bigWig raw signal ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 11191726 Richard Myers, HAIB 31ec7bea63894895ed2d13beb321127f https://www.encodeproject.org/files/ENCFF000PRE/@@download/ENCFF000PRE.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000PRJ fastq reads ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1025829912 Richard Myers, HAIB 8d5bd2915d916e127e9ce1e0f79cbfd2 https://www.encodeproject.org/files/ENCFF000PRJ/@@download/ENCFF000PRJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF000PRL fastq reads ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1310304518 Richard Myers, HAIB dd94888936254731d407b0a52530b86c https://www.encodeproject.org/files/ENCFF000PRL/@@download/ENCFF000PRL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POH/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF001UHU bed broadPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 186875 Richard Myers, HAIB 3a9740fdeed604fe690de8e24e113015 https://www.encodeproject.org/files/ENCFF001UHU/@@download/ENCFF001UHU.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF001UHV bed broadPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 18397 Richard Myers, HAIB 5f189d0574b39501046e73fefc81c658 https://www.encodeproject.org/files/ENCFF001UHV/@@download/ENCFF001UHV.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF002CLF bed narrowPeak optimal idr thresholded peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 52120 ENCODE Consortium Analysis Working Group cf726c8c2b2cdf3ccdfcb4232d5f3431 https://www.encodeproject.org/files/ENCFF002CLF/@@download/ENCFF002CLF.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF126UPS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE ENCFF002CLF 177409 ENCODE Consortium 9ad71c527f1dd3984471dfec2f03c581 https://www.encodeproject.org/files/ENCFF126UPS/@@download/ENCFF126UPS.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF167ZAW bam alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PRJ, ENCFF643CGH 507564616 ENCODE Processing Pipeline c06f8ab3d520166b50e0fb60905dfecc https://www.encodeproject.org/files/ENCFF167ZAW/@@download/ENCFF167ZAW.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF424JUA bam unfiltered alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PRJ, ENCFF643CGH 1269520060 ENCODE Processing Pipeline e5ce7bfed3884601e7598dc2eda2beeb https://www.encodeproject.org/files/ENCFF424JUA/@@download/ENCFF424JUA.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF382ZGT bam unfiltered alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PRL, ENCFF643CGH 1776076359 ENCODE Processing Pipeline 72e83ba6ca003daaad891edebc376a61 https://www.encodeproject.org/files/ENCFF382ZGT/@@download/ENCFF382ZGT.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF948DOF bam alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PRL, ENCFF643CGH 1076708084 ENCODE Processing Pipeline 2162c858f2bdbe6d452ff3368bb5eae2 https://www.encodeproject.org/files/ENCFF948DOF/@@download/ENCFF948DOF.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF200BEZ bam unfiltered alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PRJ, ENCFF807MUK 1265995713 ENCODE Processing Pipeline 6876cfd1a08e678194d1a38fdc84e954 https://www.encodeproject.org/files/ENCFF200BEZ/@@download/ENCFF200BEZ.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF455VKD bam alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PRJ, ENCFF807MUK 507868592 ENCODE Processing Pipeline e2223999b5e531a4be148630f2b74e6c https://www.encodeproject.org/files/ENCFF455VKD/@@download/ENCFF455VKD.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF110OVH bam unfiltered alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PRL, ENCFF807MUK 1770876161 ENCODE Processing Pipeline dcd88975103e8936fe869d6533ed9e0e https://www.encodeproject.org/files/ENCFF110OVH/@@download/ENCFF110OVH.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF353IXR bam alignments ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PRL, ENCFF807MUK 1076633212 ENCODE Processing Pipeline d2a72b4d0b1594b88fc5a24875d7f6ee https://www.encodeproject.org/files/ENCFF353IXR/@@download/ENCFF353IXR.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF924TXL bigWig signal p-value ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF167ZAW, ENCFF193YIO, ENCFF943DZB 576985800 ENCODE Processing Pipeline e4cafb8db0e1676f7d4f0307f9269621 https://www.encodeproject.org/files/ENCFF924TXL/@@download/ENCFF924TXL.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF044UZR bigWig signal p-value ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF943DZB, ENCFF948DOF 626305786 ENCODE Processing Pipeline fbb5d02305aa28f63e83cd5a9a3c371c https://www.encodeproject.org/files/ENCFF044UZR/@@download/ENCFF044UZR.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF268MXY bigWig signal p-value ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF167ZAW, ENCFF193YIO, ENCFF943DZB, ENCFF948DOF 785736198 ENCODE Processing Pipeline 44fe927e0cb6f624ad50745c75972b03 https://www.encodeproject.org/files/ENCFF268MXY/@@download/ENCFF268MXY.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF628KKM bigWig fold change over control ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF167ZAW, ENCFF193YIO, ENCFF943DZB 301474702 ENCODE Processing Pipeline 3c4cc0049d1b519df752e68f0d10fee9 https://www.encodeproject.org/files/ENCFF628KKM/@@download/ENCFF628KKM.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF406LCO bigWig fold change over control ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF943DZB, ENCFF948DOF 546447311 ENCODE Processing Pipeline cd927bf32d619e3dd99adf7e9cd35213 https://www.encodeproject.org/files/ENCFF406LCO/@@download/ENCFF406LCO.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF883ERP bigWig fold change over control ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF167ZAW, ENCFF193YIO, ENCFF943DZB, ENCFF948DOF 719529840 ENCODE Processing Pipeline c3cec4f73638b6fde5edaa28d20828c3 https://www.encodeproject.org/files/ENCFF883ERP/@@download/ENCFF883ERP.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF378FHV bed narrowPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF943DZB, ENCFF948DOF 5488133 ENCODE Processing Pipeline 2072cffd0db8cc0d4df040b46e7df610 https://www.encodeproject.org/files/ENCFF378FHV/@@download/ENCFF378FHV.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF645JFE bed narrowPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF167ZAW, ENCFF193YIO, ENCFF943DZB, ENCFF948DOF 5992159 ENCODE Processing Pipeline 7d9dfd35c0916f8333d6c20993087671 https://www.encodeproject.org/files/ENCFF645JFE/@@download/ENCFF645JFE.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF730DJF bed narrowPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF167ZAW, ENCFF193YIO, ENCFF943DZB 4311896 ENCODE Processing Pipeline a98e14f8d36aa6926fd093b4897db6f5 https://www.encodeproject.org/files/ENCFF730DJF/@@download/ENCFF730DJF.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF405EWG bigBed narrowPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF645JFE 11409470 ENCODE Processing Pipeline 4ae2b50debf071c086f820417a2cee95 https://www.encodeproject.org/files/ENCFF405EWG/@@download/ENCFF405EWG.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF802XJS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF666HKG 56489 ENCODE Processing Pipeline 3d4cca6e33113154bae53ff7e4a15b73 https://www.encodeproject.org/files/ENCFF802XJS/@@download/ENCFF802XJS.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF247RLG bigBed narrowPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF730DJF 10507141 ENCODE Processing Pipeline b154b48a27bbf6c6a51c26a2dc9d1c7e https://www.encodeproject.org/files/ENCFF247RLG/@@download/ENCFF247RLG.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF299JYV bed narrowPeak optimal idr thresholded peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF378FHV, ENCFF419RSJ, ENCFF645JFE, ENCFF730DJF 82741 ENCODE Processing Pipeline b7bb2469a60f4b8cdd671d788fa78216 https://www.encodeproject.org/files/ENCFF299JYV/@@download/ENCFF299JYV.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF133HHH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF299JYV 181454 ENCODE Processing Pipeline 64b21aab34efd88e8b5194f4d2e1be76 https://www.encodeproject.org/files/ENCFF133HHH/@@download/ENCFF133HHH.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF734AVB bigBed narrowPeak peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF378FHV 11313252 ENCODE Processing Pipeline 189d707cb0e4ec16b0864607353ff909 https://www.encodeproject.org/files/ENCFF734AVB/@@download/ENCFF734AVB.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF666HKG bed narrowPeak conservative idr thresholded peaks ENCSR000BJG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF378FHV, ENCFF419RSJ, ENCFF645JFE, ENCFF730DJF 7723 ENCODE Processing Pipeline 7b0b1dc65dd38f8a58a58701a8254972 https://www.encodeproject.org/files/ENCFF666HKG/@@download/ENCFF666HKG.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance ENCFF000MZY bam alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NAI 917282545 Richard Myers, HAIB 90c71e94f290de87884fab0f4db43334 https://www.encodeproject.org/files/ENCFF000MZY/@@download/ENCFF000MZY.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000MZZ bam alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NAH 763456755 Richard Myers, HAIB d714d37f2ee457a01f113e32625236ef https://www.encodeproject.org/files/ENCFF000MZZ/@@download/ENCFF000MZZ.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NAB bigWig raw signal ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 1 23594892 Richard Myers, HAIB f316b2263bf08ce69db007eb75438ebc https://www.encodeproject.org/files/ENCFF000NAB/@@download/ENCFF000NAB.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000NAC bigWig raw signal ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 1 26101942 Richard Myers, HAIB 241e01154354969f285cda1e043c8d8e https://www.encodeproject.org/files/ENCFF000NAC/@@download/ENCFF000NAC.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000NAH fastq reads ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 698200509 Richard Myers, HAIB 86ca37809a3311b189c3ee3fefa3a3da https://www.encodeproject.org/files/ENCFF000NAH/@@download/ENCFF000NAH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGB/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NAI fastq reads ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 831536401 Richard Myers, HAIB 7c238bfb41efa9336ad924a163107c70 https://www.encodeproject.org/files/ENCFF000NAI/@@download/ENCFF000NAI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGB/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF100NDO bam unfiltered alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAH, ENCFF643CGH 907729341 ENCODE Processing Pipeline 123e2bf6a0a88be87b689c5471766bfb https://www.encodeproject.org/files/ENCFF100NDO/@@download/ENCFF100NDO.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF142VIE bam unfiltered alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NAI, ENCFF643CGH 1093931004 ENCODE Processing Pipeline ef0908d27ec213a7027b3561edbcb89c https://www.encodeproject.org/files/ENCFF142VIE/@@download/ENCFF142VIE.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF325BGM bam alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAH, ENCFF643CGH 510539331 ENCODE Processing Pipeline 290a57bf4e5135433517e5361002bae5 https://www.encodeproject.org/files/ENCFF325BGM/@@download/ENCFF325BGM.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF285GBC bam alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NAI, ENCFF643CGH 641729351 ENCODE Processing Pipeline 86cdf4db468ca120f2fc1e4a6ed3b33d https://www.encodeproject.org/files/ENCFF285GBC/@@download/ENCFF285GBC.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF592ZAW bam unfiltered alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAH, ENCFF807MUK 904702170 ENCODE Processing Pipeline de4a19a1d47403486cb8ab773578f3a8 https://www.encodeproject.org/files/ENCFF592ZAW/@@download/ENCFF592ZAW.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF879AJU bam alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAH, ENCFF807MUK 510780075 ENCODE Processing Pipeline 5bfd82ae48513ab427aa0383f3ed4af7 https://www.encodeproject.org/files/ENCFF879AJU/@@download/ENCFF879AJU.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF420WIR bam unfiltered alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NAI, ENCFF807MUK 1088171004 ENCODE Processing Pipeline cfef1fef387f50d755616d9ecf880ab1 https://www.encodeproject.org/files/ENCFF420WIR/@@download/ENCFF420WIR.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF336HSE bam alignments ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NAI, ENCFF807MUK 641934085 ENCODE Processing Pipeline f2115baea14a16ca4fffba42c21b1be3 https://www.encodeproject.org/files/ENCFF336HSE/@@download/ENCFF336HSE.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF931XWC bigWig signal p-value ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF285GBC, ENCFF570JEY 385387087 ENCODE Processing Pipeline 3cdc2fe3bed108645eefdf236f72f458 https://www.encodeproject.org/files/ENCFF931XWC/@@download/ENCFF931XWC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF529JIR bigWig fold change over control ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF285GBC, ENCFF325BGM, ENCFF570JEY 526957804 ENCODE Processing Pipeline 15bd0f6e76ec61ff549ca5b48c9e733e https://www.encodeproject.org/files/ENCFF529JIR/@@download/ENCFF529JIR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF934QQH bed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF285GBC, ENCFF570JEY 4491216 ENCODE Processing Pipeline b8f0d2d6c14ffbd7c9a9ca64cb50a915 https://www.encodeproject.org/files/ENCFF934QQH/@@download/ENCFF934QQH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF791VHV bed narrowPeak conservative idr thresholded peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF191XRV, ENCFF419RSJ, ENCFF824DRB, ENCFF934QQH 440098 ENCODE Processing Pipeline 671d5a4eed133034f0d49cbe25cfdb68 https://www.encodeproject.org/files/ENCFF791VHV/@@download/ENCFF791VHV.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF283CAL bigWig fold change over control ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF325BGM, ENCFF570JEY 270594578 ENCODE Processing Pipeline 21d95b3a01be371e583591d213f05158 https://www.encodeproject.org/files/ENCFF283CAL/@@download/ENCFF283CAL.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF185VEF bigBed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF191XRV 11241410 ENCODE Processing Pipeline e4b801fb68535dd6c709074bf2049d00 https://www.encodeproject.org/files/ENCFF185VEF/@@download/ENCFF185VEF.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF542NWD bigWig signal p-value ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF285GBC, ENCFF325BGM, ENCFF570JEY 475815438 ENCODE Processing Pipeline 7ca46ab7d8644ada863feaa75e44f4d3 https://www.encodeproject.org/files/ENCFF542NWD/@@download/ENCFF542NWD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF333XHR bigBed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF934QQH 10790753 ENCODE Processing Pipeline 9563aa6aa22a51fea031f5e9dfe685af https://www.encodeproject.org/files/ENCFF333XHR/@@download/ENCFF333XHR.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF500CAL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF297HAX 935825 ENCODE Processing Pipeline 4991bca2da7ed12ce71b0d63e8dedcff https://www.encodeproject.org/files/ENCFF500CAL/@@download/ENCFF500CAL.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF399ECM bigWig signal p-value ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF325BGM, ENCFF570JEY 401223527 ENCODE Processing Pipeline bf08ba0acd4d5c0a25b2aae3d5d3a565 https://www.encodeproject.org/files/ENCFF399ECM/@@download/ENCFF399ECM.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF771GWG bigBed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF824DRB 10605989 ENCODE Processing Pipeline 540a8b128e412dfa3fe2266b83193198 https://www.encodeproject.org/files/ENCFF771GWG/@@download/ENCFF771GWG.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF134PKS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF791VHV 798333 ENCODE Processing Pipeline 932057c287b28b6699cd197299c95678 https://www.encodeproject.org/files/ENCFF134PKS/@@download/ENCFF134PKS.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF297HAX bed narrowPeak optimal idr thresholded peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF191XRV, ENCFF419RSJ, ENCFF824DRB, ENCFF934QQH 542179 ENCODE Processing Pipeline 34ca231016192e42298695c5c65cc372 https://www.encodeproject.org/files/ENCFF297HAX/@@download/ENCFF297HAX.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF111IIM bigWig fold change over control ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF285GBC, ENCFF570JEY 338277426 ENCODE Processing Pipeline 8db3953a4530d286510d28ce2caf921f https://www.encodeproject.org/files/ENCFF111IIM/@@download/ENCFF111IIM.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF824DRB bed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF325BGM, ENCFF570JEY 4607119 ENCODE Processing Pipeline 95318a2d9bacbe1360377eb73a046d6c https://www.encodeproject.org/files/ENCFF824DRB/@@download/ENCFF824DRB.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF191XRV bed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF285GBC, ENCFF325BGM, ENCFF570JEY 5301684 ENCODE Processing Pipeline 967e15909e6e2465d0556555795295dd https://www.encodeproject.org/files/ENCFF191XRV/@@download/ENCFF191XRV.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF014NQI bigWig signal p-value ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF540RWT, ENCFF879AJU 391380509 ENCODE Processing Pipeline d58ba8ad3ceed2463162fa6937428f97 https://www.encodeproject.org/files/ENCFF014NQI/@@download/ENCFF014NQI.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF748ERW bigWig fold change over control ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF540RWT, ENCFF879AJU 270505986 ENCODE Processing Pipeline 2ea226a4f44b85399810df74d163c1e4 https://www.encodeproject.org/files/ENCFF748ERW/@@download/ENCFF748ERW.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF337VFV bigWig signal p-value ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF336HSE, ENCFF540RWT 399863706 ENCODE Processing Pipeline 5233abaaeec1f71773d06d0e9c4ffb91 https://www.encodeproject.org/files/ENCFF337VFV/@@download/ENCFF337VFV.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF169EXC bigWig fold change over control ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF336HSE, ENCFF540RWT 341651780 ENCODE Processing Pipeline 26ef3c44c42a41cfe25aeff506924326 https://www.encodeproject.org/files/ENCFF169EXC/@@download/ENCFF169EXC.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF300XQO bigWig fold change over control ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF336HSE, ENCFF540RWT, ENCFF879AJU 525661646 ENCODE Processing Pipeline b5ad10c28a17a866204c79df8272c88a https://www.encodeproject.org/files/ENCFF300XQO/@@download/ENCFF300XQO.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF591IMY bed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF336HSE, ENCFF540RWT 4548314 ENCODE Processing Pipeline 798f793a84f1e3af58a15813a23217b0 https://www.encodeproject.org/files/ENCFF591IMY/@@download/ENCFF591IMY.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF699KBP bigWig signal p-value ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF336HSE, ENCFF540RWT, ENCFF879AJU 475982760 ENCODE Processing Pipeline 8d0c05a690450ae14269cb115978cbf9 https://www.encodeproject.org/files/ENCFF699KBP/@@download/ENCFF699KBP.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF175AMB bigBed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF420TYJ 11236396 ENCODE Processing Pipeline 0959cccb2897f21cbc61d954b6036af8 https://www.encodeproject.org/files/ENCFF175AMB/@@download/ENCFF175AMB.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF116SSE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF755AXA 935249 ENCODE Processing Pipeline eeac7e076ad1ad7edf7fa3f30416d05a https://www.encodeproject.org/files/ENCFF116SSE/@@download/ENCFF116SSE.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF840ZOF bed narrowPeak conservative idr thresholded peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF420TYJ, ENCFF591IMY, ENCFF605IMH 439768 ENCODE Processing Pipeline 920d4e9a311a4c11e6de13f8c2194529 https://www.encodeproject.org/files/ENCFF840ZOF/@@download/ENCFF840ZOF.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF659ZNL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF840ZOF 796866 ENCODE Processing Pipeline 89b00ab222d07dbb1cd40a5d8782b8fe https://www.encodeproject.org/files/ENCFF659ZNL/@@download/ENCFF659ZNL.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF755AXA bed narrowPeak optimal idr thresholded peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF420TYJ, ENCFF591IMY, ENCFF605IMH 541926 ENCODE Processing Pipeline 7833f49f8263628cdb770c7d08714a7d https://www.encodeproject.org/files/ENCFF755AXA/@@download/ENCFF755AXA.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF605IMH bed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF540RWT, ENCFF879AJU 4607785 ENCODE Processing Pipeline 1344f2b1b6e3a6c9ab3165215b3a5777 https://www.encodeproject.org/files/ENCFF605IMH/@@download/ENCFF605IMH.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF420TYJ bed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF336HSE, ENCFF540RWT, ENCFF879AJU 5302846 ENCODE Processing Pipeline cb55e9bfeb2597b7d7a2204b1293c34d https://www.encodeproject.org/files/ENCFF420TYJ/@@download/ENCFF420TYJ.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF006IBV bigBed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF591IMY 10855290 ENCODE Processing Pipeline 6f300e99a58c081e79e74caf234386ab https://www.encodeproject.org/files/ENCFF006IBV/@@download/ENCFF006IBV.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF703YRC bigBed narrowPeak peaks ENCSR000BRD ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF605IMH 10601899 ENCODE Processing Pipeline eb0b8a4ab0cbab0dcee44e4c821e0fdc https://www.encodeproject.org/files/ENCFF703YRC/@@download/ENCFF703YRC.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF204SCC fastq reads ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 1 50 single-ended 1928647239 Richard Myers, HAIB 958fd5ff95d60799f33afd6e29ff50b5 SRA:SRR5331441 https://www.encodeproject.org/files/ENCFF204SCC/@@download/ENCFF204SCC.fastq.gz HiSeq 2000 /files/ENCFF225JIA/ released borderline replicate concordance missing unfiltered alignments ENCFF583BRM fastq reads ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 1 50 single-ended 1141399880 Richard Myers, HAIB 40f5d8a369a6f215217d9bc1cb9d85eb SRA:SRR5331440 https://www.encodeproject.org/files/ENCFF583BRM/@@download/ENCFF583BRM.fastq.gz HiSeq 2000 /files/ENCFF090NGH/ released borderline replicate concordance missing unfiltered alignments ENCFF563WQV bam alignments ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 50 ENCFF583BRM, ENCFF807MUK 896436280 ENCODE Processing Pipeline c863e3c9a4b93c39d6f7b7955df320d7 https://www.encodeproject.org/files/ENCFF563WQV/@@download/ENCFF563WQV.bam hg19 released borderline replicate concordance missing unfiltered alignments ENCFF534KZJ bam alignments ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 50 ENCFF204SCC, ENCFF807MUK 1529926606 ENCODE Processing Pipeline 6cccf27645b6e4e60e6abe2e7729c540 https://www.encodeproject.org/files/ENCFF534KZJ/@@download/ENCFF534KZJ.bam hg19 released borderline replicate concordance missing unfiltered alignments ENCFF811SCS bigWig signal p-value ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 ENCFF445QVI, ENCFF563WQV, ENCFF927EKA 639684025 ENCODE Processing Pipeline 7fc27715a41dfd315c08290ac26790eb https://www.encodeproject.org/files/ENCFF811SCS/@@download/ENCFF811SCS.bigWig hg19 released borderline replicate concordance missing unfiltered alignments ENCFF095UKZ bigWig signal p-value ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF445QVI, ENCFF534KZJ, ENCFF563WQV, ENCFF927EKA 1057410454 ENCODE Processing Pipeline acefa07fc98201284e7e07af365cf5b3 https://www.encodeproject.org/files/ENCFF095UKZ/@@download/ENCFF095UKZ.bigWig hg19 released borderline replicate concordance missing unfiltered alignments ENCFF347VWB bigWig fold change over control ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 ENCFF445QVI, ENCFF534KZJ, ENCFF927EKA 788447734 ENCODE Processing Pipeline 99037c0a7a22abc5b996d9d70c6deca2 https://www.encodeproject.org/files/ENCFF347VWB/@@download/ENCFF347VWB.bigWig hg19 released borderline replicate concordance missing unfiltered alignments ENCFF846TRX bed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 ENCFF445QVI, ENCFF534KZJ, ENCFF927EKA 6731053 ENCODE Processing Pipeline 7268d5254a0b1fb2e2af59a0bf851ec8 https://www.encodeproject.org/files/ENCFF846TRX/@@download/ENCFF846TRX.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF097ZFO bigWig signal p-value ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 ENCFF445QVI, ENCFF534KZJ, ENCFF927EKA 853905606 ENCODE Processing Pipeline 4cb7e7fb738337fa9a9b84d1d5c12e96 https://www.encodeproject.org/files/ENCFF097ZFO/@@download/ENCFF097ZFO.bigWig hg19 released borderline replicate concordance missing unfiltered alignments ENCFF493ZGH bed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 ENCFF445QVI, ENCFF563WQV, ENCFF927EKA 6278467 ENCODE Processing Pipeline c3e6b8a485e8bd298fa9c2ae32c9ffe3 https://www.encodeproject.org/files/ENCFF493ZGH/@@download/ENCFF493ZGH.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF598QVS bigWig fold change over control ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 ENCFF445QVI, ENCFF563WQV, ENCFF927EKA 573340837 ENCODE Processing Pipeline 4e51fdc7ece09c54827ebe4ce4863b0f https://www.encodeproject.org/files/ENCFF598QVS/@@download/ENCFF598QVS.bigWig hg19 released borderline replicate concordance missing unfiltered alignments ENCFF546BYE bigWig fold change over control ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF445QVI, ENCFF534KZJ, ENCFF563WQV, ENCFF927EKA 1082344054 ENCODE Processing Pipeline 89964c6e3e19460471339dd70a41a62e https://www.encodeproject.org/files/ENCFF546BYE/@@download/ENCFF546BYE.bigWig hg19 released borderline replicate concordance missing unfiltered alignments ENCFF196ECC bed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF445QVI, ENCFF534KZJ, ENCFF563WQV, ENCFF927EKA 7067949 ENCODE Processing Pipeline 84642ffd46d3d8d8d11695770f278b13 https://www.encodeproject.org/files/ENCFF196ECC/@@download/ENCFF196ECC.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF837ZXT bigBed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 ENCFF846TRX 13274009 ENCODE Processing Pipeline 5ea8af022cb66b9dc47f178cd1218817 https://www.encodeproject.org/files/ENCFF837ZXT/@@download/ENCFF837ZXT.bigBed hg19 released borderline replicate concordance missing unfiltered alignments ENCFF736FXF bigBed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 ENCFF493ZGH 13338058 ENCODE Processing Pipeline 4f6faf37cd24513670c7d25ef99ddb37 https://www.encodeproject.org/files/ENCFF736FXF/@@download/ENCFF736FXF.bigBed hg19 released borderline replicate concordance missing unfiltered alignments ENCFF582YLE bigBed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF196ECC 13223049 ENCODE Processing Pipeline 32d68f751a1fe471a791a8ee6ef36195 https://www.encodeproject.org/files/ENCFF582YLE/@@download/ENCFF582YLE.bigBed hg19 released borderline replicate concordance missing unfiltered alignments ENCFF147IJZ bam unfiltered alignments ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 50 ENCFF583BRM, ENCFF643CGH 1247194765 ENCODE Processing Pipeline e24f173d3d4293c90b32fe8e81445953 https://www.encodeproject.org/files/ENCFF147IJZ/@@download/ENCFF147IJZ.bam GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF893PGF bam alignments ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 50 ENCFF583BRM, ENCFF643CGH 899220998 ENCODE Processing Pipeline 9f88985aa7cc4b73b561cc827078b829 https://www.encodeproject.org/files/ENCFF893PGF/@@download/ENCFF893PGF.bam GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF287MOV bam unfiltered alignments ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 50 ENCFF204SCC, ENCFF643CGH 2104045401 ENCODE Processing Pipeline e364ac2afffd3112452e3db0b2976a57 https://www.encodeproject.org/files/ENCFF287MOV/@@download/ENCFF287MOV.bam GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF641VCR bam alignments ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 50 ENCFF204SCC, ENCFF643CGH 1535357296 ENCODE Processing Pipeline 23870d173b9512c98100475d5f80a89b https://www.encodeproject.org/files/ENCFF641VCR/@@download/ENCFF641VCR.bam GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF877CEC bigWig signal p-value ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 ENCFF183AOM, ENCFF290EGQ, ENCFF641VCR 823044296 ENCODE Processing Pipeline d74898821bec70cdd66cf73ec222f13f https://www.encodeproject.org/files/ENCFF877CEC/@@download/ENCFF877CEC.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF437QUC bigWig signal p-value ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 ENCFF183AOM, ENCFF290EGQ, ENCFF893PGF 714541921 ENCODE Processing Pipeline f657989b230373b871ec963074530e5a https://www.encodeproject.org/files/ENCFF437QUC/@@download/ENCFF437QUC.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF302DMZ bigWig signal p-value ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF183AOM, ENCFF290EGQ, ENCFF641VCR, ENCFF893PGF 1050242539 ENCODE Processing Pipeline 780efed8db1db2845e8a223110f49275 https://www.encodeproject.org/files/ENCFF302DMZ/@@download/ENCFF302DMZ.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF734YAE bigWig fold change over control ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 ENCFF183AOM, ENCFF290EGQ, ENCFF641VCR 776137963 ENCODE Processing Pipeline 50049f5bb05078588dfc023b87e19d5f https://www.encodeproject.org/files/ENCFF734YAE/@@download/ENCFF734YAE.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF264JDM bigWig fold change over control ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 ENCFF183AOM, ENCFF290EGQ, ENCFF893PGF 587488136 ENCODE Processing Pipeline f854ea0c16dd3c7ba00fc934d081ce01 https://www.encodeproject.org/files/ENCFF264JDM/@@download/ENCFF264JDM.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF794XLB bigWig fold change over control ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF183AOM, ENCFF290EGQ, ENCFF641VCR, ENCFF893PGF 1072582154 ENCODE Processing Pipeline a92b225fa9c4f28cde78a66348932c8b https://www.encodeproject.org/files/ENCFF794XLB/@@download/ENCFF794XLB.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF965CZF bed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF183AOM, ENCFF290EGQ, ENCFF641VCR, ENCFF893PGF 6939696 ENCODE Processing Pipeline 0d512286c7257a791cc463627d578bb8 https://www.encodeproject.org/files/ENCFF965CZF/@@download/ENCFF965CZF.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF990NXB bigBed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF965CZF 13208487 ENCODE Processing Pipeline 26003198a7b20f65153d59d08dcdc634 https://www.encodeproject.org/files/ENCFF990NXB/@@download/ENCFF990NXB.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF775QKY bed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 ENCFF183AOM, ENCFF290EGQ, ENCFF641VCR 6590975 ENCODE Processing Pipeline f204f96d49b1dd6509b93563af2d4151 https://www.encodeproject.org/files/ENCFF775QKY/@@download/ENCFF775QKY.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF817EFX bigBed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1 ENCFF775QKY 13254192 ENCODE Processing Pipeline eaa8dd3d410f60bc607dd7c2fe71641d https://www.encodeproject.org/files/ENCFF817EFX/@@download/ENCFF817EFX.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF907JXH bed narrowPeak conservative idr thresholded peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF775QKY, ENCFF799PZN, ENCFF965CZF 175819 ENCODE Processing Pipeline d3ed189a54e6aa34f5cf94145c517edc https://www.encodeproject.org/files/ENCFF907JXH/@@download/ENCFF907JXH.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF799PZN bed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 ENCFF183AOM, ENCFF290EGQ, ENCFF893PGF 6050631 ENCODE Processing Pipeline 016d9a42e5258f51490e7000af1c9b39 https://www.encodeproject.org/files/ENCFF799PZN/@@download/ENCFF799PZN.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF418ORB bigBed narrowPeak peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 2 ENCFF799PZN 13350675 ENCODE Processing Pipeline 6c927398f2adec261d5ad07676d3d787 https://www.encodeproject.org/files/ENCFF418ORB/@@download/ENCFF418ORB.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF125JVH bigBed narrowPeak conservative idr thresholded peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF907JXH 407064 ENCODE Processing Pipeline 8cac6cd47e344ecb97a41d959602dc93 https://www.encodeproject.org/files/ENCFF125JVH/@@download/ENCFF125JVH.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF630FLK bed narrowPeak optimal idr thresholded peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF775QKY, ENCFF799PZN, ENCFF965CZF 264396 ENCODE Processing Pipeline 1307e25bd4c8b822ca0dca5bf395edec https://www.encodeproject.org/files/ENCFF630FLK/@@download/ENCFF630FLK.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF688FED bigBed narrowPeak optimal idr thresholded peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF630FLK 551743 ENCODE Processing Pipeline 6fa137356bf686d6dabfa91fd6ab94a0 https://www.encodeproject.org/files/ENCFF688FED/@@download/ENCFF688FED.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments ENCFF613ZJY bigBed narrowPeak conservative idr thresholded peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF266JBU 305218 ENCODE Processing Pipeline 6654f75130692c0513bce6ccd57a4447 https://www.encodeproject.org/files/ENCFF613ZJY/@@download/ENCFF613ZJY.bigBed hg19 released borderline replicate concordance missing unfiltered alignments ENCFF266JBU bed narrowPeak conservative idr thresholded peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF001TDO, ENCFF196ECC, ENCFF493ZGH, ENCFF846TRX 148381 ENCODE Processing Pipeline 75f8120aab0d90b0c8f68f250e263996 https://www.encodeproject.org/files/ENCFF266JBU/@@download/ENCFF266JBU.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF845VWY bigBed narrowPeak optimal idr thresholded peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF123WEZ 484391 ENCODE Processing Pipeline 96e9c0dd8e3fed72c1b21d4cae7c5394 https://www.encodeproject.org/files/ENCFF845VWY/@@download/ENCFF845VWY.bigBed hg19 released borderline replicate concordance missing unfiltered alignments ENCFF123WEZ bed narrowPeak optimal idr thresholded peaks ENCSR207PFI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBED1-human ENCAB000AAK DNA False 2016-02-05 ENCODE 1, 2 ENCFF001TDO, ENCFF196ECC, ENCFF493ZGH, ENCFF846TRX 217520 ENCODE Processing Pipeline 6c56ef3935736be7731a0100ba97731f https://www.encodeproject.org/files/ENCFF123WEZ/@@download/ENCFF123WEZ.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments ENCFF002BFH fastq reads ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1272359428 Richard Myers, HAIB ba6a8d0f63526b139a763ac29ecfcb08 SRA:SRR5339391 https://www.encodeproject.org/files/ENCFF002BFH/@@download/ENCFF002BFH.fastq.gz HiSeq 2000 /files/ENCFF002BGA/ released control low read depth, antibody characterized with exemption, low read depth ENCFF964RPP fastq reads ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1314889666 Richard Myers, HAIB b2eeb24154559932eced2b9dabcc4973 SRA:SRR5339390 https://www.encodeproject.org/files/ENCFF964RPP/@@download/ENCFF964RPP.fastq.gz HiSeq 2000 /files/ENCFF192IAC/ released control low read depth, antibody characterized with exemption, low read depth ENCFF581VMI bam unfiltered alignments ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFH, ENCFF643CGH 1377852338 ENCODE Processing Pipeline ab16f893ac6506062760ba22605e79a5 https://www.encodeproject.org/files/ENCFF581VMI/@@download/ENCFF581VMI.bam GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF162MTY bam alignments ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFH, ENCFF643CGH 1054788070 ENCODE Processing Pipeline a40d0f581f1c9bd8b90a08894ca0d60f https://www.encodeproject.org/files/ENCFF162MTY/@@download/ENCFF162MTY.bam GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF193PTK bam unfiltered alignments ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF807MUK, ENCFF964RPP 1387483505 ENCODE Processing Pipeline 2fd698f5b5c82afe482d52335ab8072a https://www.encodeproject.org/files/ENCFF193PTK/@@download/ENCFF193PTK.bam hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF936WIW bam unfiltered alignments ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF643CGH, ENCFF964RPP 1388985304 ENCODE Processing Pipeline 334e4066c38761349f178dca58d0dbe2 https://www.encodeproject.org/files/ENCFF936WIW/@@download/ENCFF936WIW.bam GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF045MGB bam unfiltered alignments ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFH, ENCFF807MUK 1375527748 ENCODE Processing Pipeline 7b181c3fc9a6590b7a9953264685c7d5 https://www.encodeproject.org/files/ENCFF045MGB/@@download/ENCFF045MGB.bam hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF500GPO bam alignments ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF807MUK, ENCFF964RPP 1051799974 ENCODE Processing Pipeline 7f6a54b74440f971bd3ded4b5c9bbaa0 https://www.encodeproject.org/files/ENCFF500GPO/@@download/ENCFF500GPO.bam hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF614KRR bam alignments ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF643CGH, ENCFF964RPP 1056986153 ENCODE Processing Pipeline 76947ec6ef90e32b1ccc6463e389d3f9 https://www.encodeproject.org/files/ENCFF614KRR/@@download/ENCFF614KRR.bam GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF517YSM bam alignments ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFH, ENCFF807MUK 1048679444 ENCODE Processing Pipeline f542a92b10f88d5b03d66a033833841a https://www.encodeproject.org/files/ENCFF517YSM/@@download/ENCFF517YSM.bam hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF881BYX bigWig signal p-value ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF423BBH, ENCFF614KRR, ENCFF747NOF 776051773 ENCODE Processing Pipeline 43d322dad4d95b205db7d87b16b6e4c7 https://www.encodeproject.org/files/ENCFF881BYX/@@download/ENCFF881BYX.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF966LCJ bigWig signal p-value ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF162MTY, ENCFF423BBH, ENCFF747NOF 809821614 ENCODE Processing Pipeline b9cfe8afc3cddef861f99731ff45594a https://www.encodeproject.org/files/ENCFF966LCJ/@@download/ENCFF966LCJ.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF648MAE bigWig signal p-value ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF162MTY, ENCFF423BBH, ENCFF614KRR, ENCFF747NOF 878301320 ENCODE Processing Pipeline d7452e962515e498a7f34f1d172e4faa https://www.encodeproject.org/files/ENCFF648MAE/@@download/ENCFF648MAE.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF284OTT bigWig fold change over control ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF423BBH, ENCFF614KRR, ENCFF747NOF 525215756 ENCODE Processing Pipeline 050ba6ecc94658cc4ef4cbad60282b96 https://www.encodeproject.org/files/ENCFF284OTT/@@download/ENCFF284OTT.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF745JSM bigWig fold change over control ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF162MTY, ENCFF423BBH, ENCFF747NOF 539129417 ENCODE Processing Pipeline db887a63fe0cfa45b2f421e2ef3c0cf6 https://www.encodeproject.org/files/ENCFF745JSM/@@download/ENCFF745JSM.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF639LCK bigWig fold change over control ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF162MTY, ENCFF423BBH, ENCFF614KRR, ENCFF747NOF 838786357 ENCODE Processing Pipeline 6c954581ab2163ed7d8d0dacf104305e https://www.encodeproject.org/files/ENCFF639LCK/@@download/ENCFF639LCK.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF659OTK bigBed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF646WFE 13465302 ENCODE Processing Pipeline 773726a4b8fdd8f8dfe6503c94a5ab4a https://www.encodeproject.org/files/ENCFF659OTK/@@download/ENCFF659OTK.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF698YPW bigBed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF961VUW 11322439 ENCODE Processing Pipeline 79b4fd0d2562d0314a1c291bae45ba7d https://www.encodeproject.org/files/ENCFF698YPW/@@download/ENCFF698YPW.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF646WFE bed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF423BBH, ENCFF614KRR, ENCFF747NOF 6062346 ENCODE Processing Pipeline 0524e595bf8fef96484aa775673a8b21 https://www.encodeproject.org/files/ENCFF646WFE/@@download/ENCFF646WFE.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF795GZP bed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF162MTY, ENCFF423BBH, ENCFF614KRR, ENCFF747NOF 6395569 ENCODE Processing Pipeline 2552bf0b9e257d55c0d002d5765e350e https://www.encodeproject.org/files/ENCFF795GZP/@@download/ENCFF795GZP.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF711VDK bigBed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF795GZP 13636096 ENCODE Processing Pipeline 13f4997e1fe7fcd3260b33c566d456db https://www.encodeproject.org/files/ENCFF711VDK/@@download/ENCFF711VDK.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF961VUW bed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF162MTY, ENCFF423BBH, ENCFF747NOF 5458452 ENCODE Processing Pipeline 7f6d0775533a4e3bc388164b68d2ddd3 https://www.encodeproject.org/files/ENCFF961VUW/@@download/ENCFF961VUW.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF503NOA bigBed narrowPeak conservative idr thresholded peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF035AJG 1073227 ENCODE Processing Pipeline 9c8ee0c78780a92303ba71057816bd79 https://www.encodeproject.org/files/ENCFF503NOA/@@download/ENCFF503NOA.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF086FOI bigBed narrowPeak optimal idr thresholded peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF091YID 1198509 ENCODE Processing Pipeline ea002a8b6e6e1a6bc373b6f089f7a1a4 https://www.encodeproject.org/files/ENCFF086FOI/@@download/ENCFF086FOI.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF035AJG bed narrowPeak conservative idr thresholded peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF646WFE, ENCFF795GZP, ENCFF961VUW 521147 ENCODE Processing Pipeline 603440d0b20450c1c33b08646e9b3510 https://www.encodeproject.org/files/ENCFF035AJG/@@download/ENCFF035AJG.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF091YID bed narrowPeak optimal idr thresholded peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF646WFE, ENCFF795GZP, ENCFF961VUW 605844 ENCODE Processing Pipeline 6a779db924de2fca75c71bc99be06fc1 https://www.encodeproject.org/files/ENCFF091YID/@@download/ENCFF091YID.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth ENCFF608VRG bigWig signal p-value ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF500GPO, ENCFF787RYL, ENCFF991WDT 770224812 ENCODE Processing Pipeline e6b9f472e3e53f793a88b993db621bf6 https://www.encodeproject.org/files/ENCFF608VRG/@@download/ENCFF608VRG.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF948DXE bigWig signal p-value ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF517YSM, ENCFF787RYL, ENCFF991WDT 661703033 ENCODE Processing Pipeline 5b48690b0c185e740a1c138dd49faef3 https://www.encodeproject.org/files/ENCFF948DXE/@@download/ENCFF948DXE.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF741RBE bigWig fold change over control ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF517YSM, ENCFF787RYL, ENCFF991WDT 531223046 ENCODE Processing Pipeline e53d1a4bc5556ca7cf8f0d1f864d9cd4 https://www.encodeproject.org/files/ENCFF741RBE/@@download/ENCFF741RBE.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF457KTG bigWig signal p-value ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF500GPO, ENCFF517YSM, ENCFF787RYL, ENCFF991WDT 1023909768 ENCODE Processing Pipeline 0d9c7fde416f10e7a65d436975790e9f https://www.encodeproject.org/files/ENCFF457KTG/@@download/ENCFF457KTG.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF292CRL bigWig fold change over control ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF500GPO, ENCFF787RYL, ENCFF991WDT 516320299 ENCODE Processing Pipeline 2b698d88cec6618214352762efc046ee https://www.encodeproject.org/files/ENCFF292CRL/@@download/ENCFF292CRL.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF510TYC bed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF517YSM, ENCFF787RYL, ENCFF991WDT 5371872 ENCODE Processing Pipeline 594c0369b32afa4408986dc95524133a https://www.encodeproject.org/files/ENCFF510TYC/@@download/ENCFF510TYC.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF642JEY bed narrowPeak conservative idr thresholded peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF263KGZ, ENCFF510TYC, ENCFF874IMP 475482 ENCODE Processing Pipeline 0e18718a3bd65d189c46e0d31de54a86 https://www.encodeproject.org/files/ENCFF642JEY/@@download/ENCFF642JEY.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF403JWE bigWig fold change over control ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF500GPO, ENCFF517YSM, ENCFF787RYL, ENCFF991WDT 865373117 ENCODE Processing Pipeline 1c370e3835a95a8c12abd7999bbd2044 https://www.encodeproject.org/files/ENCFF403JWE/@@download/ENCFF403JWE.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF148GYG bigBed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF510TYC 11216979 ENCODE Processing Pipeline 6250b55b402df62f445ed759c09f954d https://www.encodeproject.org/files/ENCFF148GYG/@@download/ENCFF148GYG.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF874IMP bed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF500GPO, ENCFF787RYL, ENCFF991WDT 5824274 ENCODE Processing Pipeline 6027065cb694432f59cc9542acf08c01 https://www.encodeproject.org/files/ENCFF874IMP/@@download/ENCFF874IMP.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF263KGZ bed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF500GPO, ENCFF517YSM, ENCFF787RYL, ENCFF991WDT 6273661 ENCODE Processing Pipeline 63d3b4d0d42da1b87519840882dc2961 https://www.encodeproject.org/files/ENCFF263KGZ/@@download/ENCFF263KGZ.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF534CKB bed narrowPeak optimal idr thresholded peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF263KGZ, ENCFF510TYC, ENCFF874IMP 555303 ENCODE Processing Pipeline 9bde60dc90e039a208a7b9b7abedd50c https://www.encodeproject.org/files/ENCFF534CKB/@@download/ENCFF534CKB.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF777PFN bigBed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF874IMP 13208040 ENCODE Processing Pipeline b0604e91c5a3934611bffca3518c21e2 https://www.encodeproject.org/files/ENCFF777PFN/@@download/ENCFF777PFN.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF451DLP bigBed narrowPeak peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF263KGZ 13501720 ENCODE Processing Pipeline 4b869a19169beca93da1180a7c88f619 https://www.encodeproject.org/files/ENCFF451DLP/@@download/ENCFF451DLP.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF531NIE bigBed narrowPeak conservative idr thresholded peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF642JEY 1012506 ENCODE Processing Pipeline 36726dec034e30b4b78e16c458a4839e https://www.encodeproject.org/files/ENCFF531NIE/@@download/ENCFF531NIE.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF735XEX bigBed narrowPeak optimal idr thresholded peaks ENCSR839XZU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF534CKB 1133667 ENCODE Processing Pipeline c63a2697bd34d44dabf3a580552ee9e1 https://www.encodeproject.org/files/ENCFF735XEX/@@download/ENCFF735XEX.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth ENCFF000PYE bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PYP 581600207 Richard Myers, HAIB 49696e44cbf4ffcbc750f108b83346e2 https://www.encodeproject.org/files/ENCFF000PYE/@@download/ENCFF000PYE.bam hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PYF bigBed broadPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJN 275046 Richard Myers, HAIB 6396ba0e521a5363d66100eb3c3c3810 https://www.encodeproject.org/files/ENCFF000PYF/@@download/ENCFF000PYF.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PYG bigBed broadPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJO 382472 Richard Myers, HAIB 3ebda10c3010ba36f750d445c9cc6a16 https://www.encodeproject.org/files/ENCFF000PYG/@@download/ENCFF000PYG.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PYH bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PYR 738742427 Richard Myers, HAIB 0063dade9f891f0c874c639f25ba0f22 https://www.encodeproject.org/files/ENCFF000PYH/@@download/ENCFF000PYH.bam hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PYI bigWig raw signal ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 1 19745066 Richard Myers, HAIB da32d50f493b4262fbe71661e3438cc0 https://www.encodeproject.org/files/ENCFF000PYI/@@download/ENCFF000PYI.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PYK bigWig raw signal ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 1 15863102 Richard Myers, HAIB 7c5708437ce525568c2d1e33e7e2d450 https://www.encodeproject.org/files/ENCFF000PYK/@@download/ENCFF000PYK.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PYP fastq reads ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 588274246 Richard Myers, HAIB ca3d789662155665e902f7500085029a https://www.encodeproject.org/files/ENCFF000PYP/@@download/ENCFF000PYP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PYR fastq reads ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 751818317 Richard Myers, HAIB 8d178e051fa0dfebc6472db97887526a https://www.encodeproject.org/files/ENCFF000PYR/@@download/ENCFF000PYR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEZ/ released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF001UJN bed broadPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 1 133235 Richard Myers, HAIB 494cf2eb4a4e61af4f28cbdabb92e34f https://www.encodeproject.org/files/ENCFF001UJN/@@download/ENCFF001UJN.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF001UJO bed broadPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 1 205299 Richard Myers, HAIB 46c1731bacab7c50cbc3bdafe122866b https://www.encodeproject.org/files/ENCFF001UJO/@@download/ENCFF001UJO.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF002CLT bed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 223604 ENCODE Consortium Analysis Working Group be3ab73eefd11e9244d32e5ff3f9e878 https://www.encodeproject.org/files/ENCFF002CLT/@@download/ENCFF002CLT.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF562MZN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE ENCFF002CLT 493500 ENCODE Consortium 56c823068640dad5f827e1f5ced547e0 https://www.encodeproject.org/files/ENCFF562MZN/@@download/ENCFF562MZN.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF454MMY bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYP, ENCFF643CGH 173515741 ENCODE Processing Pipeline 2ae305446e2f9ccff0aa694687976fe1 https://www.encodeproject.org/files/ENCFF454MMY/@@download/ENCFF454MMY.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF674NLR bam unfiltered alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYP, ENCFF643CGH 681035261 ENCODE Processing Pipeline ebd348aae1fd387c00f3be199a94c8e5 https://www.encodeproject.org/files/ENCFF674NLR/@@download/ENCFF674NLR.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF310MOR bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYR, ENCFF643CGH 358057678 ENCODE Processing Pipeline d10690068504fe0172c3c4c3524ab20a https://www.encodeproject.org/files/ENCFF310MOR/@@download/ENCFF310MOR.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF186CHS bam unfiltered alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYR, ENCFF643CGH 885125423 ENCODE Processing Pipeline 158c7a4efa87936c14ecf0d1086a6dad https://www.encodeproject.org/files/ENCFF186CHS/@@download/ENCFF186CHS.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF097SZB bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYP, ENCFF807MUK 173750695 ENCODE Processing Pipeline 43dec3433f9a8fd555d3943a7234b628 https://www.encodeproject.org/files/ENCFF097SZB/@@download/ENCFF097SZB.bam hg19 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF072NCZ bam unfiltered alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYP, ENCFF807MUK 678667024 ENCODE Processing Pipeline 750f1c4cedd76e75a0d1597551700b2a https://www.encodeproject.org/files/ENCFF072NCZ/@@download/ENCFF072NCZ.bam hg19 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF487BCT bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYR, ENCFF807MUK 358358664 ENCODE Processing Pipeline 63fb3ab8092b08728b1f64e5f62bcdf7 https://www.encodeproject.org/files/ENCFF487BCT/@@download/ENCFF487BCT.bam hg19 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF045OLP bam unfiltered alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYR, ENCFF807MUK 882820742 ENCODE Processing Pipeline 96707e647b0c91d995d9bd2450d02705 https://www.encodeproject.org/files/ENCFF045OLP/@@download/ENCFF045OLP.bam hg19 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF657ZXF bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF454MMY 400274188 ENCODE Processing Pipeline 7d4f924a624e69aeca2dfd07de5ce52f https://www.encodeproject.org/files/ENCFF657ZXF/@@download/ENCFF657ZXF.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF815MAO bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310MOR 397111095 ENCODE Processing Pipeline 5450dccba3109d89f02da4ca57621227 https://www.encodeproject.org/files/ENCFF815MAO/@@download/ENCFF815MAO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF390UEN bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310MOR, ENCFF454MMY 430598775 ENCODE Processing Pipeline 7d313fa2c531cb52f14d0839a7d2fc44 https://www.encodeproject.org/files/ENCFF390UEN/@@download/ENCFF390UEN.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF239AZX bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF454MMY 113570051 ENCODE Processing Pipeline 0d3a44e974a4b81278a92c1bae3aeadc https://www.encodeproject.org/files/ENCFF239AZX/@@download/ENCFF239AZX.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF060KQV bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310MOR 202666949 ENCODE Processing Pipeline 403be738afacba5a3148f7c209178631 https://www.encodeproject.org/files/ENCFF060KQV/@@download/ENCFF060KQV.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF694EHL bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310MOR, ENCFF454MMY 288288967 ENCODE Processing Pipeline eb03a9a739328b05e1723a59bdd8e8df https://www.encodeproject.org/files/ENCFF694EHL/@@download/ENCFF694EHL.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF036DBK bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF454MMY 1665736 ENCODE Processing Pipeline 3fce9268c8cc973914edfc7dd81b2b3f https://www.encodeproject.org/files/ENCFF036DBK/@@download/ENCFF036DBK.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF943BRX bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310MOR 3851100 ENCODE Processing Pipeline d02cbd0eb2e02c428d530666e0d72eb9 https://www.encodeproject.org/files/ENCFF943BRX/@@download/ENCFF943BRX.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF081QMM bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310MOR, ENCFF454MMY 4200248 ENCODE Processing Pipeline 757833ea1c24a80ef783e81e28aa707b https://www.encodeproject.org/files/ENCFF081QMM/@@download/ENCFF081QMM.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF278WKB bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF036DBK 3620948 ENCODE Processing Pipeline 2ea9cc7a22bccafe69b31b300c96e100 https://www.encodeproject.org/files/ENCFF278WKB/@@download/ENCFF278WKB.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF737SZP bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF943BRX 8156710 ENCODE Processing Pipeline ee5d319a6908ee567d08c2eab36cb739 https://www.encodeproject.org/files/ENCFF737SZP/@@download/ENCFF737SZP.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF380EWF bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF081QMM 8611472 ENCODE Processing Pipeline b37c6722370154b6712412218944c0fa https://www.encodeproject.org/files/ENCFF380EWF/@@download/ENCFF380EWF.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF653WEF bed narrowPeak conservative idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036DBK, ENCFF081QMM, ENCFF419RSJ, ENCFF943BRX 177236 ENCODE Processing Pipeline de17ec2cde176b415fa6a7cade839301 https://www.encodeproject.org/files/ENCFF653WEF/@@download/ENCFF653WEF.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF980TKJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF653WEF 341691 ENCODE Processing Pipeline f15b85cdd0e519f27b99d8ef11b9fd41 https://www.encodeproject.org/files/ENCFF980TKJ/@@download/ENCFF980TKJ.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF678TFE bed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036DBK, ENCFF081QMM, ENCFF419RSJ, ENCFF943BRX 217116 ENCODE Processing Pipeline 52cf0413173f65ad29804dc0a8b17381 https://www.encodeproject.org/files/ENCFF678TFE/@@download/ENCFF678TFE.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF146UYC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF678TFE 394774 ENCODE Processing Pipeline 9e6d1985d87843fd310698c44fc38b80 https://www.encodeproject.org/files/ENCFF146UYC/@@download/ENCFF146UYC.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF097CTQ fastq reads ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF321GWR 3023008882 Richard Myers, HAIB df28ca02b123ff96af536084026d2a34 https://www.encodeproject.org/files/ENCFF097CTQ/@@download/ENCFF097CTQ.fastq.gz HiSeq 2000 /files/ENCFF949BQT/ released antibody characterized with exemption experiment not submitted to GEO ENCFF321GWR fastq reads ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF097CTQ 3161998315 Richard Myers, HAIB 05383d4114d239b59d58321c18f573d4 https://www.encodeproject.org/files/ENCFF321GWR/@@download/ENCFF321GWR.fastq.gz HiSeq 2000 /files/ENCFF217QQZ/ released antibody characterized with exemption experiment not submitted to GEO ENCFF848MIK bam unfiltered alignments ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF097CTQ, ENCFF321GWR, ENCFF807MUK 7183349571 ENCODE Processing Pipeline 0be6c5b888cfc6754dd4126cb83c32eb https://www.encodeproject.org/files/ENCFF848MIK/@@download/ENCFF848MIK.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF036PVG bam alignments ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF097CTQ, ENCFF321GWR, ENCFF807MUK 5074812429 ENCODE Processing Pipeline 236325343e2af05275f674d70e2ebdac https://www.encodeproject.org/files/ENCFF036PVG/@@download/ENCFF036PVG.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF430QKJ bam alignments ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF097CTQ, ENCFF321GWR, ENCFF643CGH 5078688686 ENCODE Processing Pipeline 30de3f6c2a54d653b97d77feea05343a https://www.encodeproject.org/files/ENCFF430QKJ/@@download/ENCFF430QKJ.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF865FVR bam unfiltered alignments ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF097CTQ, ENCFF321GWR, ENCFF643CGH 7210671462 ENCODE Processing Pipeline 5fa39b69c7331b127417625403cf21e3 https://www.encodeproject.org/files/ENCFF865FVR/@@download/ENCFF865FVR.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF165XPM bigWig signal p-value ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF430QKJ, ENCFF572OLC 2063131593 ENCODE Processing Pipeline 33a230562e05d049fbb9f1d849ef3b53 https://www.encodeproject.org/files/ENCFF165XPM/@@download/ENCFF165XPM.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF530CKE bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF999DBK 760526 ENCODE Processing Pipeline b1bca71215e65c018c9a8c9f4ec1bd3a https://www.encodeproject.org/files/ENCFF530CKE/@@download/ENCFF530CKE.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF828MFS bigBed narrowPeak peaks ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF333BFY 11606010 ENCODE Processing Pipeline 2d8bbdfac26e2b548d1ce879350293eb https://www.encodeproject.org/files/ENCFF828MFS/@@download/ENCFF828MFS.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF333BFY bed narrowPeak peaks ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF430QKJ, ENCFF572OLC 7065330 ENCODE Processing Pipeline 4015f6cb7c649c79441e23a2c73e8724 https://www.encodeproject.org/files/ENCFF333BFY/@@download/ENCFF333BFY.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF318NHJ bigWig fold change over control ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF430QKJ, ENCFF572OLC 2018615866 ENCODE Processing Pipeline e321e69dfa57884c59d9eb926874f4f7 https://www.encodeproject.org/files/ENCFF318NHJ/@@download/ENCFF318NHJ.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF999DBK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF333BFY, ENCFF419RSJ 441321 ENCODE Processing Pipeline b4246199e0e6c629fca9464e369c6ef3 https://www.encodeproject.org/files/ENCFF999DBK/@@download/ENCFF999DBK.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF833PAL bigBed narrowPeak peaks ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF751MNI 11587881 ENCODE Processing Pipeline c7c0239801a22c2ff49af5196607bbe1 https://www.encodeproject.org/files/ENCFF833PAL/@@download/ENCFF833PAL.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF251KBL bigWig signal p-value ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF003VUV, ENCFF036PVG 2068142748 ENCODE Processing Pipeline cd198abe3f122f9666b1e4dc00a17f42 https://www.encodeproject.org/files/ENCFF251KBL/@@download/ENCFF251KBL.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF751MNI bed narrowPeak peaks ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF003VUV, ENCFF036PVG 7063991 ENCODE Processing Pipeline eecdf6db6da53ab478b31050f2298412 https://www.encodeproject.org/files/ENCFF751MNI/@@download/ENCFF751MNI.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF792QGT bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF751MNI 445448 ENCODE Processing Pipeline 15c311c339ae613c5ca6b8c1a083460f https://www.encodeproject.org/files/ENCFF792QGT/@@download/ENCFF792QGT.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF128YAW bigWig fold change over control ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF003VUV, ENCFF036PVG 1953441989 ENCODE Processing Pipeline 5c2c57e50370a8a50fa0c32724cb54bc https://www.encodeproject.org/files/ENCFF128YAW/@@download/ENCFF128YAW.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF635NRQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR464CSO ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF792QGT 760343 ENCODE Processing Pipeline 3bc24fcbfec1eeafe1c9dcb5cf5945a6 https://www.encodeproject.org/files/ENCFF635NRQ/@@download/ENCFF635NRQ.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF415LTO fastq reads ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 1 ENCFF963NAF 2132467875 Richard Myers, HAIB 0ea3b4096d219dc6bb4fc52f9c0c2229 SRA:SRR6212882 https://www.encodeproject.org/files/ENCFF415LTO/@@download/ENCFF415LTO.fastq.gz HiSeq 2000 /files/ENCFF917RIA/ released antibody characterized with exemption ENCFF963NAF fastq reads ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 2 ENCFF415LTO 2178381073 Richard Myers, HAIB 47cfe42d08001a4e755b40192681a3f4 SRA:SRR6212882 https://www.encodeproject.org/files/ENCFF963NAF/@@download/ENCFF963NAF.fastq.gz HiSeq 2000 /files/ENCFF613PQJ/ released antibody characterized with exemption ENCFF299HJB bam unfiltered alignments ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF415LTO, ENCFF643CGH, ENCFF963NAF 5146906410 ENCODE Processing Pipeline 026ccc56b4dfa396aa87b588464b9c3a https://www.encodeproject.org/files/ENCFF299HJB/@@download/ENCFF299HJB.bam GRCh38 released antibody characterized with exemption ENCFF315PWO bam alignments ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF415LTO, ENCFF643CGH, ENCFF963NAF 3984913954 ENCODE Processing Pipeline 80f2095c70b6a5d49ae8bb0ee70fcd7d https://www.encodeproject.org/files/ENCFF315PWO/@@download/ENCFF315PWO.bam GRCh38 released antibody characterized with exemption ENCFF815UQQ bam unfiltered alignments ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF415LTO, ENCFF807MUK, ENCFF963NAF 5127328409 ENCODE Processing Pipeline b1c7a18e4cbd016121c0d12a00bf19c3 https://www.encodeproject.org/files/ENCFF815UQQ/@@download/ENCFF815UQQ.bam hg19 released antibody characterized with exemption ENCFF603NZR bam alignments ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF415LTO, ENCFF807MUK, ENCFF963NAF 3983388986 ENCODE Processing Pipeline f8db66bdf8c58e36d99b043c27073c40 https://www.encodeproject.org/files/ENCFF603NZR/@@download/ENCFF603NZR.bam hg19 released antibody characterized with exemption ENCFF787HWB bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF156HCI 1237482 ENCODE Processing Pipeline 86e7e8688aa7e3a47b4163691111b271 https://www.encodeproject.org/files/ENCFF787HWB/@@download/ENCFF787HWB.bigBed GRCh38 released antibody characterized with exemption ENCFF043ZLX bigWig fold change over control ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF315PWO, ENCFF993NZP 1375489000 ENCODE Processing Pipeline 087e8aa8ed396ee6896b5cf0107c00b6 https://www.encodeproject.org/files/ENCFF043ZLX/@@download/ENCFF043ZLX.bigWig GRCh38 released antibody characterized with exemption ENCFF219LKP bigBed narrowPeak peaks ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF053BWK 13767115 ENCODE Processing Pipeline cdf71d222bcb8d205ff422e84ff1ca60 https://www.encodeproject.org/files/ENCFF219LKP/@@download/ENCFF219LKP.bigBed GRCh38 released antibody characterized with exemption ENCFF156HCI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF053BWK, ENCFF419RSJ 595310 ENCODE Processing Pipeline ac5ae233be4d81d11f4fe94ad5fed7b0 https://www.encodeproject.org/files/ENCFF156HCI/@@download/ENCFF156HCI.bed.gz GRCh38 released antibody characterized with exemption ENCFF074VQD bigWig signal p-value ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF315PWO, ENCFF993NZP 1171934896 ENCODE Processing Pipeline 4673a359072fde1044ab7e2cbf0c093e https://www.encodeproject.org/files/ENCFF074VQD/@@download/ENCFF074VQD.bigWig GRCh38 released antibody characterized with exemption ENCFF053BWK bed narrowPeak peaks ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF315PWO, ENCFF993NZP 6755619 ENCODE Processing Pipeline 347f69a976eaefb196ddce3e8848b1e1 https://www.encodeproject.org/files/ENCFF053BWK/@@download/ENCFF053BWK.bed.gz GRCh38 released antibody characterized with exemption ENCFF760FNL bigWig fold change over control ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF201UJX, ENCFF603NZR 1392113651 ENCODE Processing Pipeline 87b0d35961bb87c793e0725e142b46f7 https://www.encodeproject.org/files/ENCFF760FNL/@@download/ENCFF760FNL.bigWig hg19 released antibody characterized with exemption ENCFF229ALI bigBed narrowPeak peaks ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF623DIA 13776547 ENCODE Processing Pipeline 00fb5b4e3bcf40ebcda4304c0c6b2f1f https://www.encodeproject.org/files/ENCFF229ALI/@@download/ENCFF229ALI.bigBed hg19 released antibody characterized with exemption ENCFF623DIA bed narrowPeak peaks ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF201UJX, ENCFF603NZR 6780853 ENCODE Processing Pipeline 011af19b49f81fe00b87b10b268c2bfd https://www.encodeproject.org/files/ENCFF623DIA/@@download/ENCFF623DIA.bed.gz hg19 released antibody characterized with exemption ENCFF297RWQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF402FNX 1232339 ENCODE Processing Pipeline c0991275c1cf5aafc20f5e9217f695b5 https://www.encodeproject.org/files/ENCFF297RWQ/@@download/ENCFF297RWQ.bigBed hg19 released antibody characterized with exemption ENCFF106GQM bigWig signal p-value ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF201UJX, ENCFF603NZR 1635771495 ENCODE Processing Pipeline f028e6d578be387d52b2285b3b5c010f https://www.encodeproject.org/files/ENCFF106GQM/@@download/ENCFF106GQM.bigWig hg19 released antibody characterized with exemption ENCFF402FNX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR170NMC ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF001TDO, ENCFF623DIA 596425 ENCODE Processing Pipeline c02a3abfa00617748f809aeb2aa3549d https://www.encodeproject.org/files/ENCFF402FNX/@@download/ENCFF402FNX.bed.gz hg19 released antibody characterized with exemption ENCFF168ACZ fastq reads ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF107NVA 3238282518 Richard Myers, HAIB 40576f4a9f62568b13a320094ea8d6ec https://www.encodeproject.org/files/ENCFF168ACZ/@@download/ENCFF168ACZ.fastq.gz HiSeq 2000 /files/ENCFF323QXB/ released antibody characterized with exemption experiment not submitted to GEO ENCFF107NVA fastq reads ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF168ACZ 3310054939 Richard Myers, HAIB 11fe5df7a848036f47ea1c75a7bb2b7c https://www.encodeproject.org/files/ENCFF107NVA/@@download/ENCFF107NVA.fastq.gz HiSeq 2000 /files/ENCFF291KWD/ released antibody characterized with exemption experiment not submitted to GEO ENCFF457HWE bam unfiltered alignments ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF107NVA, ENCFF168ACZ, ENCFF807MUK 7251744227 ENCODE Processing Pipeline ff898636ef0d0446934d56b74e828a0d https://www.encodeproject.org/files/ENCFF457HWE/@@download/ENCFF457HWE.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF054XTB bam alignments ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF107NVA, ENCFF168ACZ, ENCFF807MUK 4962255454 ENCODE Processing Pipeline 9e05964d35b18b88deaa6ebb19ea00c0 https://www.encodeproject.org/files/ENCFF054XTB/@@download/ENCFF054XTB.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF939MWT bam alignments ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF107NVA, ENCFF168ACZ, ENCFF643CGH 4965806951 ENCODE Processing Pipeline 76974b07bfa25eb208842932b5bb1f1e https://www.encodeproject.org/files/ENCFF939MWT/@@download/ENCFF939MWT.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF928DRB bam unfiltered alignments ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF107NVA, ENCFF168ACZ, ENCFF643CGH 7267995518 ENCODE Processing Pipeline f49bfc2c86ca4a74556cb6f041676c43 https://www.encodeproject.org/files/ENCFF928DRB/@@download/ENCFF928DRB.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF555PVZ bed narrowPeak peaks ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF207QPG, ENCFF939MWT 7063304 ENCODE Processing Pipeline d11402b07d3e0fa17cb30689fca5d0a8 https://www.encodeproject.org/files/ENCFF555PVZ/@@download/ENCFF555PVZ.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF965HAP bigWig signal p-value ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF207QPG, ENCFF939MWT 1912667161 ENCODE Processing Pipeline 22ec89612152aedc21e52acf9087d5fb https://www.encodeproject.org/files/ENCFF965HAP/@@download/ENCFF965HAP.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF444VGY bed narrowPeak peaks ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF054XTB, ENCFF559IFX 7119153 ENCODE Processing Pipeline b7d3368470103c4a5374888a107557cf https://www.encodeproject.org/files/ENCFF444VGY/@@download/ENCFF444VGY.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF372RYV bigBed narrowPeak peaks ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF555PVZ 12857521 ENCODE Processing Pipeline 514f7c44aef7e8c1d6b258eab8b9c2d7 https://www.encodeproject.org/files/ENCFF372RYV/@@download/ENCFF372RYV.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF547PHI bigWig fold change over control ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF207QPG, ENCFF939MWT 1748454056 ENCODE Processing Pipeline 8b425e5ea9ca46c1065d8f987bb054d6 https://www.encodeproject.org/files/ENCFF547PHI/@@download/ENCFF547PHI.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF210AWI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF134BTP 1670610 ENCODE Processing Pipeline c4d7aea8b1aafcebab3dae11c49e2afc https://www.encodeproject.org/files/ENCFF210AWI/@@download/ENCFF210AWI.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF196PEM bigWig fold change over control ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF054XTB, ENCFF559IFX 1756508551 ENCODE Processing Pipeline 328354a0d699b009526c68cec08982d5 https://www.encodeproject.org/files/ENCFF196PEM/@@download/ENCFF196PEM.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF134BTP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF555PVZ 934534 ENCODE Processing Pipeline a3a0e8500adb12fecffbc1a6473628ae https://www.encodeproject.org/files/ENCFF134BTP/@@download/ENCFF134BTP.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF406SOZ bigBed narrowPeak peaks ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF444VGY 12920067 ENCODE Processing Pipeline 0f94c33f82af504010937416720736af https://www.encodeproject.org/files/ENCFF406SOZ/@@download/ENCFF406SOZ.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF870LOR bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF444VGY 951343 ENCODE Processing Pipeline b37abfcb3dc8b07dabd7cbfa4442b204 https://www.encodeproject.org/files/ENCFF870LOR/@@download/ENCFF870LOR.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF160ZUB bigWig signal p-value ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF054XTB, ENCFF559IFX 1624397988 ENCODE Processing Pipeline 94b7c22c0e1a86052e7a30a78deb27d3 https://www.encodeproject.org/files/ENCFF160ZUB/@@download/ENCFF160ZUB.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF971FCU bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR978LQC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF870LOR 2144480 ENCODE Processing Pipeline 2ce26ed589de4c22a8e19790d660d30a https://www.encodeproject.org/files/ENCFF971FCU/@@download/ENCFF971FCU.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF000PKC bam alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PKK 704067144 Richard Myers, HAIB 6225409dd03c4ef3d95a7b226b7715b2 https://www.encodeproject.org/files/ENCFF000PKC/@@download/ENCFF000PKC.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PKD bigBed broadPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UGK 618193 Richard Myers, HAIB 639fc91517998b41b7fff78525c38f22 https://www.encodeproject.org/files/ENCFF000PKD/@@download/ENCFF000PKD.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PKE bigBed broadPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UGL 956685 Richard Myers, HAIB 0cdbc15ce5c718716b0570e7461bfe56 https://www.encodeproject.org/files/ENCFF000PKE/@@download/ENCFF000PKE.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PKF bam alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PKR 1320498007 Richard Myers, HAIB 18926390bda0129d1e4fdeeb4218b5b4 https://www.encodeproject.org/files/ENCFF000PKF/@@download/ENCFF000PKF.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PKG bigWig raw signal ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 1 20447827 Richard Myers, HAIB 7d2328b2925093f5e8061e5f05f42cf2 https://www.encodeproject.org/files/ENCFF000PKG/@@download/ENCFF000PKG.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PKI bigWig raw signal ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 1 43157002 Richard Myers, HAIB 84d76376a3ce376eea4f3cfd24ea51ee https://www.encodeproject.org/files/ENCFF000PKI/@@download/ENCFF000PKI.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PKK fastq reads ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 870198613 Richard Myers, HAIB 12857dfa153ddd1f97a56c8e661247cc https://www.encodeproject.org/files/ENCFF000PKK/@@download/ENCFF000PKK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PKR fastq reads ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1518600887 Richard Myers, HAIB 828fc0b304ee33c3124b0373eff7477f https://www.encodeproject.org/files/ENCFF000PKR/@@download/ENCFF000PKR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF001UGK bed broadPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 1 352072 Richard Myers, HAIB 03f4a310f5c3179d8830b85a237f8853 https://www.encodeproject.org/files/ENCFF001UGK/@@download/ENCFF001UGK.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UGL bed broadPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 1 482239 Richard Myers, HAIB 69710c7d6ed5bd46a795852aa6d562ba https://www.encodeproject.org/files/ENCFF001UGL/@@download/ENCFF001UGL.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CKP bed narrowPeak optimal idr thresholded peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 417508 ENCODE Consortium Analysis Working Group 3f5847a857c4581b0a6eee63d611118d https://www.encodeproject.org/files/ENCFF002CKP/@@download/ENCFF002CKP.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF999AFA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE ENCFF002CKP 931565 ENCODE Consortium ff2ac51ae792fcd94c0055bfd239efd7 https://www.encodeproject.org/files/ENCFF999AFA/@@download/ENCFF999AFA.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF943YUP bam unfiltered alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PKK, ENCFF643CGH 1089538622 ENCODE Processing Pipeline 548273be223e4bb8f9f60b3d70eb0f93 https://www.encodeproject.org/files/ENCFF943YUP/@@download/ENCFF943YUP.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF521KDX bam alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PKK, ENCFF643CGH 535567390 ENCODE Processing Pipeline 61047e90a3f93a875c43d21e51e3027c https://www.encodeproject.org/files/ENCFF521KDX/@@download/ENCFF521KDX.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF232TLZ bam unfiltered alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PKR, ENCFF643CGH 1925472528 ENCODE Processing Pipeline b2c225dd24a5c0d4ce990b0371345266 https://www.encodeproject.org/files/ENCFF232TLZ/@@download/ENCFF232TLZ.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF318WWT bam alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PKR, ENCFF643CGH 970203983 ENCODE Processing Pipeline 0e5f5b6cca88a0f33230df9b1f0f4912 https://www.encodeproject.org/files/ENCFF318WWT/@@download/ENCFF318WWT.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF575CSB bam unfiltered alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PKK, ENCFF807MUK 1086898296 ENCODE Processing Pipeline 1dfd76be56f8265e08ce983b1f6eaa21 https://www.encodeproject.org/files/ENCFF575CSB/@@download/ENCFF575CSB.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF776GGM bam alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PKK, ENCFF807MUK 535962155 ENCODE Processing Pipeline 9ecdc54b421aae00139956fc8db4e18e https://www.encodeproject.org/files/ENCFF776GGM/@@download/ENCFF776GGM.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF058QGD bam unfiltered alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PKR, ENCFF807MUK 1919584230 ENCODE Processing Pipeline 5c143aa1a45c8e77ba6040adec7c6cc2 https://www.encodeproject.org/files/ENCFF058QGD/@@download/ENCFF058QGD.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF214JZV bam alignments ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PKR, ENCFF807MUK 970685215 ENCODE Processing Pipeline 5f5d4a5167ce38457f6afcc21ac172b1 https://www.encodeproject.org/files/ENCFF214JZV/@@download/ENCFF214JZV.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF403CKU bigWig signal p-value ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF318WWT, ENCFF521KDX 342717685 ENCODE Processing Pipeline 5c5897270ac339775ef36349c1b427ab https://www.encodeproject.org/files/ENCFF403CKU/@@download/ENCFF403CKU.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF537BRA bigWig signal p-value ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF521KDX 304605309 ENCODE Processing Pipeline 3ad8aaaf17f1aedb02d1607f2f265d41 https://www.encodeproject.org/files/ENCFF537BRA/@@download/ENCFF537BRA.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF219MKG bigWig signal p-value ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF318WWT 377725889 ENCODE Processing Pipeline a82aeb285f3f82087ec349daa79116a7 https://www.encodeproject.org/files/ENCFF219MKG/@@download/ENCFF219MKG.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF895YEO bigWig fold change over control ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF318WWT 354050492 ENCODE Processing Pipeline 148f37dd87cad5de6de0e24950abd629 https://www.encodeproject.org/files/ENCFF895YEO/@@download/ENCFF895YEO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF009FVW bigWig fold change over control ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF318WWT, ENCFF521KDX 490000399 ENCODE Processing Pipeline 277cfa4f186e46ae69467e5891e269b9 https://www.encodeproject.org/files/ENCFF009FVW/@@download/ENCFF009FVW.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF402COT bigWig fold change over control ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF521KDX 208995649 ENCODE Processing Pipeline a32474a8e90334963dcb3419b0f2f32a https://www.encodeproject.org/files/ENCFF402COT/@@download/ENCFF402COT.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF684IDW bed narrowPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF318WWT, ENCFF521KDX 5602251 ENCODE Processing Pipeline 0f17af686fe268b0555a9028a65dd35c https://www.encodeproject.org/files/ENCFF684IDW/@@download/ENCFF684IDW.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF596AJD bigBed narrowPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308OYP 10086959 ENCODE Processing Pipeline b3caeef20f58144d8c8c7440837072af https://www.encodeproject.org/files/ENCFF596AJD/@@download/ENCFF596AJD.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF413IZF bed narrowPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF318WWT 4849263 ENCODE Processing Pipeline 4d82c166d142633d4909666a8716015e https://www.encodeproject.org/files/ENCFF413IZF/@@download/ENCFF413IZF.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF739DWK bigBed narrowPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF413IZF 10569321 ENCODE Processing Pipeline 6c528c81787ccf4067aa3a6621fdfb03 https://www.encodeproject.org/files/ENCFF739DWK/@@download/ENCFF739DWK.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF308OYP bed narrowPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF521KDX 4434650 ENCODE Processing Pipeline 4208409a40550f1cf71c2b9d97b1e87c https://www.encodeproject.org/files/ENCFF308OYP/@@download/ENCFF308OYP.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF528STQ bigBed narrowPeak peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF684IDW 13311507 ENCODE Processing Pipeline c4c86a1fd4ac23d9a5f4e06d8c55f2da https://www.encodeproject.org/files/ENCFF528STQ/@@download/ENCFF528STQ.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF539GRW bed narrowPeak optimal idr thresholded peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308OYP, ENCFF413IZF, ENCFF419RSJ, ENCFF684IDW 483317 ENCODE Processing Pipeline b11ef31a67b9c676568ec98b18abd22c https://www.encodeproject.org/files/ENCFF539GRW/@@download/ENCFF539GRW.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF768ZRJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF483RLR 925586 ENCODE Processing Pipeline 74e48f6c87d80d8de6608f980ffe2cd7 https://www.encodeproject.org/files/ENCFF768ZRJ/@@download/ENCFF768ZRJ.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF483RLR bed narrowPeak conservative idr thresholded peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308OYP, ENCFF413IZF, ENCFF419RSJ, ENCFF684IDW 451822 ENCODE Processing Pipeline 6309a92d83f3f613955bf6a72802147a https://www.encodeproject.org/files/ENCFF483RLR/@@download/ENCFF483RLR.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF326BMU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF539GRW 977148 ENCODE Processing Pipeline c8600999d5701beb88cda79d9a41cdfe https://www.encodeproject.org/files/ENCFF326BMU/@@download/ENCFF326BMU.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000QUQ bam alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QVE 1044101987 Richard Myers, HAIB 3ddb2781e76a1a4b16690130b301075c https://www.encodeproject.org/files/ENCFF000QUQ/@@download/ENCFF000QUQ.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QUR bam alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QVC 725289381 Richard Myers, HAIB c59461ce9f357234faac4a4289b6a050 https://www.encodeproject.org/files/ENCFF000QUR/@@download/ENCFF000QUR.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QUS bigBed broadPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UON 535228 Richard Myers, HAIB a0ce2a40e8997aa0180f074ca9cf3cc9 https://www.encodeproject.org/files/ENCFF000QUS/@@download/ENCFF000QUS.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QUT bigBed broadPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UOO 480755 Richard Myers, HAIB b1a9cb456adf8e22713489a36906b3bc https://www.encodeproject.org/files/ENCFF000QUT/@@download/ENCFF000QUT.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QUU bigWig raw signal ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 22779335 Richard Myers, HAIB fb9b4b07b83a3fcfd3e62d4ad9f4f23d https://www.encodeproject.org/files/ENCFF000QUU/@@download/ENCFF000QUU.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000QUW bigWig raw signal ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 15399002 Richard Myers, HAIB 4010db7bae1871b45020cbb66f3550ad https://www.encodeproject.org/files/ENCFF000QUW/@@download/ENCFF000QUW.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000QVC fastq reads ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 713597139 Richard Myers, HAIB 172daf07fd17e2b7044d8da49a3ec019 https://www.encodeproject.org/files/ENCFF000QVC/@@download/ENCFF000QVC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QVY/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QVE fastq reads ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1056288327 Richard Myers, HAIB 3e6d4c521ae42595268578d57de7a3d9 https://www.encodeproject.org/files/ENCFF000QVE/@@download/ENCFF000QVE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QVY/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UON bed broadPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 279688 Richard Myers, HAIB 82db0331cdb947a9559f36edabaec1e3 https://www.encodeproject.org/files/ENCFF001UON/@@download/ENCFF001UON.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UOO bed broadPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 244748 Richard Myers, HAIB c84dae0badfdead1d42eaaa3c5235ceb https://www.encodeproject.org/files/ENCFF001UOO/@@download/ENCFF001UOO.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF022VKY bam unfiltered alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QVC, ENCFF643CGH 851322058 ENCODE Processing Pipeline 86da9b50713fadc0476d33b7c73d8305 https://www.encodeproject.org/files/ENCFF022VKY/@@download/ENCFF022VKY.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF091GEA bam alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QVC, ENCFF643CGH 471510621 ENCODE Processing Pipeline a7df480b603b49bc350b1f575a0ff1b2 https://www.encodeproject.org/files/ENCFF091GEA/@@download/ENCFF091GEA.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF481LPT bam unfiltered alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QVE, ENCFF643CGH 1263438990 ENCODE Processing Pipeline 59e44c0da996fd61d3d677912fafd276 https://www.encodeproject.org/files/ENCFF481LPT/@@download/ENCFF481LPT.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF565LZS bam alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QVE, ENCFF643CGH 721783471 ENCODE Processing Pipeline 83a8d0b143eca18da7cd320a4853522c https://www.encodeproject.org/files/ENCFF565LZS/@@download/ENCFF565LZS.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF415RJB bam alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QVC, ENCFF807MUK 471786864 ENCODE Processing Pipeline 16d5d8e0856a748bbcae7c90e1d5a3d2 https://www.encodeproject.org/files/ENCFF415RJB/@@download/ENCFF415RJB.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF950YYG bam unfiltered alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QVC, ENCFF807MUK 849673421 ENCODE Processing Pipeline 535d2d3a700a4293b6e7c1928f6318fb https://www.encodeproject.org/files/ENCFF950YYG/@@download/ENCFF950YYG.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF967XIY bam unfiltered alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QVE, ENCFF807MUK 1260910068 ENCODE Processing Pipeline ee93860f5fc2dd63da055ea7f5d56cfc https://www.encodeproject.org/files/ENCFF967XIY/@@download/ENCFF967XIY.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF523END bam alignments ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QVE, ENCFF807MUK 722198110 ENCODE Processing Pipeline 4460613f75839e4a4f8f5565abe2c9e0 https://www.encodeproject.org/files/ENCFF523END/@@download/ENCFF523END.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF035POB bigWig signal p-value ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF565LZS 331686373 ENCODE Processing Pipeline b15ddd9b4dabf331acd332def5bccb5d https://www.encodeproject.org/files/ENCFF035POB/@@download/ENCFF035POB.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF763PXA bigWig signal p-value ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF091GEA 292467166 ENCODE Processing Pipeline 56afd15215536c0c2032da5ab88ed274 https://www.encodeproject.org/files/ENCFF763PXA/@@download/ENCFF763PXA.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF113WNT bigWig signal p-value ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF091GEA, ENCFF565LZS 325567570 ENCODE Processing Pipeline 95ee326c6e62adb9b49877ec25aa553a https://www.encodeproject.org/files/ENCFF113WNT/@@download/ENCFF113WNT.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF695GWY bigWig fold change over control ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF565LZS 302443558 ENCODE Processing Pipeline 1fa67d5ffa72f5cd02eb92d0c3a71d83 https://www.encodeproject.org/files/ENCFF695GWY/@@download/ENCFF695GWY.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF708UOF bigWig fold change over control ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF091GEA 226801363 ENCODE Processing Pipeline 9764c108d241ad710c05f67c4ece7f5d https://www.encodeproject.org/files/ENCFF708UOF/@@download/ENCFF708UOF.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF364BPR bigWig fold change over control ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF091GEA, ENCFF565LZS 465661925 ENCODE Processing Pipeline c53960e756e453d69ea23d654b8e8529 https://www.encodeproject.org/files/ENCFF364BPR/@@download/ENCFF364BPR.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF471PQR bed narrowPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF565LZS 4877968 ENCODE Processing Pipeline 589f6efdf6de1713148083d8153cf0ab https://www.encodeproject.org/files/ENCFF471PQR/@@download/ENCFF471PQR.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF091BQA bigBed narrowPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF509ZSR 10608372 ENCODE Processing Pipeline 528c6bd7f5b63e80a2c61f7d10c1c4c7 https://www.encodeproject.org/files/ENCFF091BQA/@@download/ENCFF091BQA.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF071IVL bed narrowPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF091GEA, ENCFF565LZS 5705493 ENCODE Processing Pipeline cfce2aa9eac17bd7cce7dd17443770d7 https://www.encodeproject.org/files/ENCFF071IVL/@@download/ENCFF071IVL.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF509ZSR bed narrowPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF091GEA 4751021 ENCODE Processing Pipeline eb5d992c6ed4df0346191868782fb103 https://www.encodeproject.org/files/ENCFF509ZSR/@@download/ENCFF509ZSR.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF085GWF bigBed narrowPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF071IVL 13293572 ENCODE Processing Pipeline 52d5925cc84fce7ffa05eeb73dceea1c https://www.encodeproject.org/files/ENCFF085GWF/@@download/ENCFF085GWF.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF640YNG bigBed narrowPeak peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF471PQR 10738923 ENCODE Processing Pipeline 6cae1277e45439bb5e9f39793ac005c9 https://www.encodeproject.org/files/ENCFF640YNG/@@download/ENCFF640YNG.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF395TFO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF259FAH 552496 ENCODE Processing Pipeline ed3d1d26bddded72dcaec27e390f6dd1 https://www.encodeproject.org/files/ENCFF395TFO/@@download/ENCFF395TFO.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF259FAH bed narrowPeak conservative idr thresholded peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF071IVL, ENCFF419RSJ, ENCFF471PQR, ENCFF509ZSR 270285 ENCODE Processing Pipeline 97176b83c86ffff695b3b447791a151f https://www.encodeproject.org/files/ENCFF259FAH/@@download/ENCFF259FAH.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF896RCP bed narrowPeak optimal idr thresholded peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF071IVL, ENCFF419RSJ, ENCFF471PQR, ENCFF509ZSR 310837 ENCODE Processing Pipeline 59420386bcf1da63796dbc9c6e66e6b2 https://www.encodeproject.org/files/ENCFF896RCP/@@download/ENCFF896RCP.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF315WVJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BOX ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF896RCP 611831 ENCODE Processing Pipeline 1ac9a0d113277472d8d3de085527a676 https://www.encodeproject.org/files/ENCFF315WVJ/@@download/ENCFF315WVJ.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF604LVZ fastq reads ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 1 50 single-ended 1459607357 Richard Myers, HAIB 70ddc60eb1069da8eeebbc689e3f6bcd SRA:SRR5339491 https://www.encodeproject.org/files/ENCFF604LVZ/@@download/ENCFF604LVZ.fastq.gz HiSeq 2000 /files/ENCFF381LXJ/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF937RXL fastq reads ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 1 50 single-ended 1014342596 Richard Myers, HAIB 9e4b1210bfdff374db36c342691a91f7 SRA:SRR5339492 https://www.encodeproject.org/files/ENCFF937RXL/@@download/ENCFF937RXL.fastq.gz HiSeq 2000 /files/ENCFF210JBU/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF287QCE bam alignments ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 50 ENCFF807MUK, ENCFF937RXL 836630533 ENCODE Processing Pipeline f71fb6fdf0281b90bb0f580a487096e8 https://www.encodeproject.org/files/ENCFF287QCE/@@download/ENCFF287QCE.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF040OBI bam alignments ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 50 ENCFF604LVZ, ENCFF807MUK 1167525971 ENCODE Processing Pipeline f1b7fa566414a134cc9bac1960815977 https://www.encodeproject.org/files/ENCFF040OBI/@@download/ENCFF040OBI.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF954DBW bigWig signal p-value ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 ENCFF287QCE, ENCFF455SPG, ENCFF853BBD 883890847 ENCODE Processing Pipeline e750470b676ace92bc3c16d12357c206 https://www.encodeproject.org/files/ENCFF954DBW/@@download/ENCFF954DBW.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF611NLX bigWig signal p-value ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF040OBI, ENCFF287QCE, ENCFF455SPG, ENCFF853BBD 1006957631 ENCODE Processing Pipeline df5d814c49f7d07fa6aeb67de17ec141 https://www.encodeproject.org/files/ENCFF611NLX/@@download/ENCFF611NLX.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF386GSB bed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 ENCFF287QCE, ENCFF455SPG, ENCFF853BBD 6557928 ENCODE Processing Pipeline 0944330696de858e261473889af491e0 https://www.encodeproject.org/files/ENCFF386GSB/@@download/ENCFF386GSB.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF825OOM bigWig signal p-value ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 ENCFF040OBI, ENCFF455SPG, ENCFF853BBD 922712482 ENCODE Processing Pipeline 6ccbe0728f770f9f7e25c50de998b747 https://www.encodeproject.org/files/ENCFF825OOM/@@download/ENCFF825OOM.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF115BED bigWig fold change over control ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 ENCFF287QCE, ENCFF455SPG, ENCFF853BBD 675159772 ENCODE Processing Pipeline d80d0cb0bb2c37bb412b9ddce5b253ba https://www.encodeproject.org/files/ENCFF115BED/@@download/ENCFF115BED.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF563BHV bigWig fold change over control ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF040OBI, ENCFF287QCE, ENCFF455SPG, ENCFF853BBD 1082529694 ENCODE Processing Pipeline 5e838f6495a5607ed3c40a5d8e586e12 https://www.encodeproject.org/files/ENCFF563BHV/@@download/ENCFF563BHV.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF850YLB bigWig fold change over control ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 ENCFF040OBI, ENCFF455SPG, ENCFF853BBD 611220430 ENCODE Processing Pipeline e3b1c3541d3ee3ca227ca135dae90b6a https://www.encodeproject.org/files/ENCFF850YLB/@@download/ENCFF850YLB.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF128RLF bed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 ENCFF040OBI, ENCFF455SPG, ENCFF853BBD 6248897 ENCODE Processing Pipeline b7ffc0466ab1748fee9b6cf80271432e https://www.encodeproject.org/files/ENCFF128RLF/@@download/ENCFF128RLF.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF615QCS bigBed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 ENCFF128RLF 13387692 ENCODE Processing Pipeline 1285428b4777ac4d2718c553dbd35955 https://www.encodeproject.org/files/ENCFF615QCS/@@download/ENCFF615QCS.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF652TKC bigBed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 ENCFF386GSB 13354369 ENCODE Processing Pipeline b1ad9af36aa9b2bf08675881ffcb97a7 https://www.encodeproject.org/files/ENCFF652TKC/@@download/ENCFF652TKC.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF487NKY bed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF040OBI, ENCFF287QCE, ENCFF455SPG, ENCFF853BBD 6995116 ENCODE Processing Pipeline 7cd06f9b09df4086b96dca7dcfb7e69e https://www.encodeproject.org/files/ENCFF487NKY/@@download/ENCFF487NKY.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF014QTE bigBed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF487NKY 13335222 ENCODE Processing Pipeline efecd484da8d1b6b853bd6243c2c142a https://www.encodeproject.org/files/ENCFF014QTE/@@download/ENCFF014QTE.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF147AFG bam unfiltered alignments ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 50 ENCFF643CGH, ENCFF937RXL 1134920789 ENCODE Processing Pipeline ae9b424a32bb26905591544782637d04 https://www.encodeproject.org/files/ENCFF147AFG/@@download/ENCFF147AFG.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF445MBN bam unfiltered alignments ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 50 ENCFF604LVZ, ENCFF643CGH 1578783842 ENCODE Processing Pipeline 0d318b18fa47eb80ed8b4e553607acb6 https://www.encodeproject.org/files/ENCFF445MBN/@@download/ENCFF445MBN.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF421SOC bam alignments ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 50 ENCFF643CGH, ENCFF937RXL 836210688 ENCODE Processing Pipeline 0a4eb1a3435903903bbf7a10968cadc6 https://www.encodeproject.org/files/ENCFF421SOC/@@download/ENCFF421SOC.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF527PGM bam alignments ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 50 ENCFF604LVZ, ENCFF643CGH 1167154433 ENCODE Processing Pipeline 4e3156af92a1265ebedd4353945b5268 https://www.encodeproject.org/files/ENCFF527PGM/@@download/ENCFF527PGM.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF345TXC bigWig signal p-value ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 ENCFF183XMB, ENCFF527PGM, ENCFF667XXT 906857553 ENCODE Processing Pipeline 8a83c60edb7906de68880e7784f0efdc https://www.encodeproject.org/files/ENCFF345TXC/@@download/ENCFF345TXC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF738VGX bigWig signal p-value ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 ENCFF183XMB, ENCFF421SOC, ENCFF667XXT 883822483 ENCODE Processing Pipeline 768aa6d5d1248abba4ae35e98f4afd30 https://www.encodeproject.org/files/ENCFF738VGX/@@download/ENCFF738VGX.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF926OZD bigWig fold change over control ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 ENCFF183XMB, ENCFF527PGM, ENCFF667XXT 604072768 ENCODE Processing Pipeline 00933c08736ef513c33205d4944a7218 https://www.encodeproject.org/files/ENCFF926OZD/@@download/ENCFF926OZD.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF645AER bigWig signal p-value ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF183XMB, ENCFF421SOC, ENCFF527PGM, ENCFF667XXT 982095904 ENCODE Processing Pipeline d13cbc3013c5151e8d8e99977f996a7d https://www.encodeproject.org/files/ENCFF645AER/@@download/ENCFF645AER.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF881BDO bigWig fold change over control ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 ENCFF183XMB, ENCFF421SOC, ENCFF667XXT 674340824 ENCODE Processing Pipeline a3270dca6f442b729c8076218a852b83 https://www.encodeproject.org/files/ENCFF881BDO/@@download/ENCFF881BDO.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF474YTK bigWig fold change over control ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF183XMB, ENCFF421SOC, ENCFF527PGM, ENCFF667XXT 1042820758 ENCODE Processing Pipeline 1959e1532e3245457976f3a444d4975e https://www.encodeproject.org/files/ENCFF474YTK/@@download/ENCFF474YTK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF984UQI bed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 ENCFF183XMB, ENCFF527PGM, ENCFF667XXT 5736412 ENCODE Processing Pipeline 88408eec4c90d051552b322d0ed30379 https://www.encodeproject.org/files/ENCFF984UQI/@@download/ENCFF984UQI.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF801GNR bed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 ENCFF183XMB, ENCFF421SOC, ENCFF667XXT 6307356 ENCODE Processing Pipeline fc2dfc0ca18ead8d5f9d6e78bf4d2e10 https://www.encodeproject.org/files/ENCFF801GNR/@@download/ENCFF801GNR.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF369HKV bigBed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF703AOH 13347143 ENCODE Processing Pipeline 9d5dc725599a2c0cd3f9fd8781c786c0 https://www.encodeproject.org/files/ENCFF369HKV/@@download/ENCFF369HKV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF703AOH bed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF183XMB, ENCFF421SOC, ENCFF527PGM, ENCFF667XXT 6886821 ENCODE Processing Pipeline 26ceb5e8e9357e07a806664c35130e22 https://www.encodeproject.org/files/ENCFF703AOH/@@download/ENCFF703AOH.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF423ZPQ bigBed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1 ENCFF984UQI 13352578 ENCODE Processing Pipeline c0b5d16d7a499c987a86c34bb546da8b https://www.encodeproject.org/files/ENCFF423ZPQ/@@download/ENCFF423ZPQ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF124UQX bigBed narrowPeak peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 2 ENCFF801GNR 13349335 ENCODE Processing Pipeline d36dd865c1c558e5bfd01f114c3fe9a7 https://www.encodeproject.org/files/ENCFF124UQX/@@download/ENCFF124UQX.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF577XYS bed narrowPeak conservative idr thresholded peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF703AOH, ENCFF801GNR, ENCFF984UQI 99225 ENCODE Processing Pipeline 441468ce614d5f08038ccd8ccd55c145 https://www.encodeproject.org/files/ENCFF577XYS/@@download/ENCFF577XYS.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF888FLY bigBed narrowPeak conservative idr thresholded peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF577XYS 237580 ENCODE Processing Pipeline 3cb0ee84df8e54d7142e19b23fa05dd3 https://www.encodeproject.org/files/ENCFF888FLY/@@download/ENCFF888FLY.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF694ZRC bed narrowPeak optimal idr thresholded peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF703AOH, ENCFF801GNR, ENCFF984UQI 176882 ENCODE Processing Pipeline b56f571499e2ddd1cbe25722af7d9547 https://www.encodeproject.org/files/ENCFF694ZRC/@@download/ENCFF694ZRC.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF176BSF bigBed narrowPeak optimal idr thresholded peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF694ZRC 419764 ENCODE Processing Pipeline 73cffa807fa859294ae53795297f2178 https://www.encodeproject.org/files/ENCFF176BSF/@@download/ENCFF176BSF.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF266WAO bigBed narrowPeak conservative idr thresholded peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF807MUP 173813 ENCODE Processing Pipeline 72f70defc913517417e50c6b43b16855 https://www.encodeproject.org/files/ENCFF266WAO/@@download/ENCFF266WAO.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF807MUP bed narrowPeak conservative idr thresholded peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF128RLF, ENCFF386GSB, ENCFF487NKY 80806 ENCODE Processing Pipeline 76407ea6d1270c61fe005ac79b5f1ea2 https://www.encodeproject.org/files/ENCFF807MUP/@@download/ENCFF807MUP.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF995BLG bigBed narrowPeak optimal idr thresholded peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF235RIU 301054 ENCODE Processing Pipeline a662160ea687e8f4c08551f007890da8 https://www.encodeproject.org/files/ENCFF995BLG/@@download/ENCFF995BLG.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF235RIU bed narrowPeak optimal idr thresholded peaks ENCSR876UYH ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZHX2-human ENCAB000ATW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF128RLF, ENCFF386GSB, ENCFF487NKY 141623 ENCODE Processing Pipeline dc7415cabbd37772afab2cd1348c825c https://www.encodeproject.org/files/ENCFF235RIU/@@download/ENCFF235RIU.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF959QTN fastq reads ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 1 50 single-ended 1329891159 Richard Myers, HAIB 139c4b5b2b7df7f0830d71495b962e7c SRA:SRR5339427 https://www.encodeproject.org/files/ENCFF959QTN/@@download/ENCFF959QTN.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF204JMO fastq reads ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 1 50 single-ended 2137886747 Richard Myers, HAIB 3d7df65026afdbf0ed8584ee3a91c06f SRA:SRR5339426 https://www.encodeproject.org/files/ENCFF204JMO/@@download/ENCFF204JMO.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF946BKE bam alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 50 ENCFF807MUK, ENCFF959QTN 1069901936 ENCODE Processing Pipeline b9efb0051d67fbf9492c1fe10f09a005 https://www.encodeproject.org/files/ENCFF946BKE/@@download/ENCFF946BKE.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF862PIC bam alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 50 ENCFF204JMO, ENCFF807MUK 1624723653 ENCODE Processing Pipeline 2738b8297ac2a9fc8786e17bc7844de8 https://www.encodeproject.org/files/ENCFF862PIC/@@download/ENCFF862PIC.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF087TRL bam unfiltered alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 50 ENCFF643CGH, ENCFF959QTN 1435019191 ENCODE Processing Pipeline c9eb686b986041921981cdc419cd16e9 https://www.encodeproject.org/files/ENCFF087TRL/@@download/ENCFF087TRL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF678DAV bam unfiltered alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 50 ENCFF204JMO, ENCFF643CGH 2256386454 ENCODE Processing Pipeline a332934800c5ac0b62c19f9912c07849 https://www.encodeproject.org/files/ENCFF678DAV/@@download/ENCFF678DAV.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF587PVQ bam alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 50 ENCFF643CGH, ENCFF959QTN 1069440142 ENCODE Processing Pipeline ff7c03249ca5cfec1c27f89d62d949d1 https://www.encodeproject.org/files/ENCFF587PVQ/@@download/ENCFF587PVQ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF742TAS bam alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 50 ENCFF204JMO, ENCFF643CGH 1624070612 ENCODE Processing Pipeline 326fef1303a337b302cab0c95306f98b https://www.encodeproject.org/files/ENCFF742TAS/@@download/ENCFF742TAS.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF072ULT bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF742TAS 1129064676 ENCODE Processing Pipeline e7492caede283d63c043dcf0f441fb94 https://www.encodeproject.org/files/ENCFF072ULT/@@download/ENCFF072ULT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF571OMJ bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF587PVQ 970182561 ENCODE Processing Pipeline 1a0f09f2bbdeeaca28ec39edf0bfe5a3 https://www.encodeproject.org/files/ENCFF571OMJ/@@download/ENCFF571OMJ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF536WVV bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF587PVQ, ENCFF742TAS 1352603340 ENCODE Processing Pipeline bc95db5d23fa9a71d4cb0ed4d55616f2 https://www.encodeproject.org/files/ENCFF536WVV/@@download/ENCFF536WVV.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF541PYZ bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF742TAS 906939221 ENCODE Processing Pipeline d7eb652986ee293a724a0608d60c4769 https://www.encodeproject.org/files/ENCFF541PYZ/@@download/ENCFF541PYZ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF008DSY bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF587PVQ 697503867 ENCODE Processing Pipeline 98a2461e7c87a4e1cadd813f8fea5d9c https://www.encodeproject.org/files/ENCFF008DSY/@@download/ENCFF008DSY.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF957KCO bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF587PVQ, ENCFF742TAS 1295839093 ENCODE Processing Pipeline 702fa1d3ef2e146000378859086fcc7f https://www.encodeproject.org/files/ENCFF957KCO/@@download/ENCFF957KCO.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF482KCZ bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF575VCO 13336359 ENCODE Processing Pipeline 4117164d454471ffa216c3d3e0462103 https://www.encodeproject.org/files/ENCFF482KCZ/@@download/ENCFF482KCZ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF575VCO bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF587PVQ, ENCFF742TAS 6926185 ENCODE Processing Pipeline f989a2624676b999e705716b76e3d2f5 https://www.encodeproject.org/files/ENCFF575VCO/@@download/ENCFF575VCO.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF490VXZ bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF344EVG 11222833 ENCODE Processing Pipeline 4a6df3259383e49bfc03308460d275d8 https://www.encodeproject.org/files/ENCFF490VXZ/@@download/ENCFF490VXZ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF621JVC bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF742TAS 6313460 ENCODE Processing Pipeline fef2a2cf175ee3d8a5aa91625c03603f https://www.encodeproject.org/files/ENCFF621JVC/@@download/ENCFF621JVC.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF344EVG bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF587PVQ 5960377 ENCODE Processing Pipeline 37d635e74414b9544ba832e25e7c05bf https://www.encodeproject.org/files/ENCFF344EVG/@@download/ENCFF344EVG.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF083NMR bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF621JVC 13405623 ENCODE Processing Pipeline b795a2d706a378f3f7427e57876df138 https://www.encodeproject.org/files/ENCFF083NMR/@@download/ENCFF083NMR.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF357AHH bed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF344EVG, ENCFF419RSJ, ENCFF575VCO, ENCFF621JVC 94723 ENCODE Processing Pipeline f2d4205f963f9e65d6a05c437d088950 https://www.encodeproject.org/files/ENCFF357AHH/@@download/ENCFF357AHH.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF512IAI bed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF344EVG, ENCFF419RSJ, ENCFF575VCO, ENCFF621JVC 108529 ENCODE Processing Pipeline e33e20bf2dddde8658e603a7255dc012 https://www.encodeproject.org/files/ENCFF512IAI/@@download/ENCFF512IAI.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF213MTE bigBed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF357AHH 237864 ENCODE Processing Pipeline 196f62736b7483857236a228ec6e5628 https://www.encodeproject.org/files/ENCFF213MTE/@@download/ENCFF213MTE.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF320ICM bigBed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF512IAI 258805 ENCODE Processing Pipeline 4c70731f70ba41eafbee379da6701472 https://www.encodeproject.org/files/ENCFF320ICM/@@download/ENCFF320ICM.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF262SAL bam unfiltered alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 50 ENCFF807MUK, ENCFF959QTN 1431937004 ENCODE Processing Pipeline fb194f8702a078062f923f1c65aa7078 https://www.encodeproject.org/files/ENCFF262SAL/@@download/ENCFF262SAL.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF344CZR bam unfiltered alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 50 ENCFF204JMO, ENCFF807MUK 2251395171 ENCODE Processing Pipeline 14d95680fe5c5dba396781a0631e1c88 https://www.encodeproject.org/files/ENCFF344CZR/@@download/ENCFF344CZR.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF667OHN bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC 1132997520 ENCODE Processing Pipeline b964841134dd3499d1c6eef97956ba3e https://www.encodeproject.org/files/ENCFF667OHN/@@download/ENCFF667OHN.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF127VYL bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC, ENCFF946BKE 6960660 ENCODE Processing Pipeline 424c487b448113ec1d5a48e87875ff0e https://www.encodeproject.org/files/ENCFF127VYL/@@download/ENCFF127VYL.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF031KDI bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF127VYL 13330277 ENCODE Processing Pipeline a6719e97eebdef92dc7adc7410094b24 https://www.encodeproject.org/files/ENCFF031KDI/@@download/ENCFF031KDI.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF620YDD bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC 863121876 ENCODE Processing Pipeline db7a5a497abb7ba3b794b4094afe8533 https://www.encodeproject.org/files/ENCFF620YDD/@@download/ENCFF620YDD.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF206YXA bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF946BKE 1039092250 ENCODE Processing Pipeline 8944a9546d816a32529ac300532f0c66 https://www.encodeproject.org/files/ENCFF206YXA/@@download/ENCFF206YXA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF307AKP bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC, ENCFF946BKE 1369292659 ENCODE Processing Pipeline afb4dee3188355c6d4cd12924c4583f9 https://www.encodeproject.org/files/ENCFF307AKP/@@download/ENCFF307AKP.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF688MOC bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF946BKE 739882166 ENCODE Processing Pipeline 384e9e4f39faa589c2095b6dbdec9f91 https://www.encodeproject.org/files/ENCFF688MOC/@@download/ENCFF688MOC.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF005PNR bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC, ENCFF946BKE 1251035049 ENCODE Processing Pipeline 8489dea74ff5fc7d95975b74f9ea1203 https://www.encodeproject.org/files/ENCFF005PNR/@@download/ENCFF005PNR.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF588ZYR bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC 6374559 ENCODE Processing Pipeline c33c3673740b566fbda54f4be7e1c3de https://www.encodeproject.org/files/ENCFF588ZYR/@@download/ENCFF588ZYR.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF086FEW bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF946BKE 5994594 ENCODE Processing Pipeline 1a05c82267f19e88a3885da5e35280e9 https://www.encodeproject.org/files/ENCFF086FEW/@@download/ENCFF086FEW.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF182AYX bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF588ZYR 13407620 ENCODE Processing Pipeline 5bc76e5a2e1e269c91b0d74f2e954839 https://www.encodeproject.org/files/ENCFF182AYX/@@download/ENCFF182AYX.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF387GNZ bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF086FEW 13363241 ENCODE Processing Pipeline 1fbcd3bc6c731ed0af4ce6af15f94238 https://www.encodeproject.org/files/ENCFF387GNZ/@@download/ENCFF387GNZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF850HGO bed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF086FEW, ENCFF127VYL, ENCFF588ZYR 93873 ENCODE Processing Pipeline d2895077f392374a42dbb1104cb96b8f https://www.encodeproject.org/files/ENCFF850HGO/@@download/ENCFF850HGO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF948XAQ bigBed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF850HGO 235256 ENCODE Processing Pipeline 041b29dbaafe0a87a94e4cbea83fcad3 https://www.encodeproject.org/files/ENCFF948XAQ/@@download/ENCFF948XAQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF249EZR bed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF086FEW, ENCFF127VYL, ENCFF588ZYR 107201 ENCODE Processing Pipeline e6d734cd2dddbdb65175f4aac5d619c6 https://www.encodeproject.org/files/ENCFF249EZR/@@download/ENCFF249EZR.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF629SVO bigBed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF249EZR 255311 ENCODE Processing Pipeline d9516d5534c39b09c44254327a3b3842 https://www.encodeproject.org/files/ENCFF629SVO/@@download/ENCFF629SVO.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF945VNK fastq reads ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1257808590 Richard Myers, HAIB 3c8ad1d2706c19b50223a1ebef31ef63 SRA:SRR5339206 https://www.encodeproject.org/files/ENCFF945VNK/@@download/ENCFF945VNK.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption biological replicates with identical biosample ENCFF765EAP fastq reads ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1659084102 Richard Myers, HAIB 727accc2e32046ab623e144e79b6ca4c SRA:SRR5339205 https://www.encodeproject.org/files/ENCFF765EAP/@@download/ENCFF765EAP.fastq.gz HiSeq 2000 /files/ENCFF977SGP/ released antibody characterized with exemption biological replicates with identical biosample ENCFF515FHW bam unfiltered alignments ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF945VNK 1424257965 ENCODE Processing Pipeline 83eda64d935bda014796cb295ee30a58 https://www.encodeproject.org/files/ENCFF515FHW/@@download/ENCFF515FHW.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF956ULJ bam unfiltered alignments ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF765EAP 1844807124 ENCODE Processing Pipeline 6abc13fa4092e102490689c62c43acc2 https://www.encodeproject.org/files/ENCFF956ULJ/@@download/ENCFF956ULJ.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF044HXX bam alignments ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF945VNK 1067040430 ENCODE Processing Pipeline 5f05145b2e1f479322b62a7334827ed8 https://www.encodeproject.org/files/ENCFF044HXX/@@download/ENCFF044HXX.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF395OWK bam alignments ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF765EAP 1408728463 ENCODE Processing Pipeline a5a2992328cdd49caf746a188931f64c https://www.encodeproject.org/files/ENCFF395OWK/@@download/ENCFF395OWK.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF735NGK bigWig signal p-value ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF395OWK, ENCFF610PNU 915470522 ENCODE Processing Pipeline 618a08eec0d4f746fc4305a40387fb3c https://www.encodeproject.org/files/ENCFF735NGK/@@download/ENCFF735NGK.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF036JKL bigWig signal p-value ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF044HXX, ENCFF200YPH, ENCFF395OWK, ENCFF610PNU 1035417766 ENCODE Processing Pipeline 748d1fede1b4c5cdd3348a944e64d8ad https://www.encodeproject.org/files/ENCFF036JKL/@@download/ENCFF036JKL.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF180STN bigWig fold change over control ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF044HXX, ENCFF200YPH, ENCFF395OWK, ENCFF610PNU 1292432285 ENCODE Processing Pipeline 5c6c1caec8ceb40d5ca8a38e23bd4d2a https://www.encodeproject.org/files/ENCFF180STN/@@download/ENCFF180STN.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF326NFN bigWig fold change over control ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF395OWK, ENCFF610PNU 892048599 ENCODE Processing Pipeline c97d819feb4f7af77c28df4dd44771d2 https://www.encodeproject.org/files/ENCFF326NFN/@@download/ENCFF326NFN.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF897JMT bigWig signal p-value ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF044HXX, ENCFF610PNU 581091788 ENCODE Processing Pipeline e32ecc2f93c8ffc2e1fe4be80d746c10 https://www.encodeproject.org/files/ENCFF897JMT/@@download/ENCFF897JMT.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF257XHW bigWig fold change over control ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF044HXX, ENCFF610PNU 508200845 ENCODE Processing Pipeline 7de78e4de9f1e5002b2ff15f5191f1a1 https://www.encodeproject.org/files/ENCFF257XHW/@@download/ENCFF257XHW.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF867EUD bed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF395OWK, ENCFF610PNU 5803308 ENCODE Processing Pipeline 30f21c293a9a8c2c34b34dd7ab8d3904 https://www.encodeproject.org/files/ENCFF867EUD/@@download/ENCFF867EUD.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF437YNA bed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF044HXX, ENCFF200YPH, ENCFF395OWK, ENCFF610PNU 6630987 ENCODE Processing Pipeline 11df97963f5e07d1017a2a51d3f05911 https://www.encodeproject.org/files/ENCFF437YNA/@@download/ENCFF437YNA.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF412OVP bigBed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF459FMQ 11306650 ENCODE Processing Pipeline 4810f0e803cc1fac960cbd91a0519a9b https://www.encodeproject.org/files/ENCFF412OVP/@@download/ENCFF412OVP.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF365HNK bigBed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF867EUD 11452184 ENCODE Processing Pipeline c724865531ebf2bc499ccb1dbb73599b https://www.encodeproject.org/files/ENCFF365HNK/@@download/ENCFF365HNK.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF741PQE bed narrowPeak conservative idr thresholded peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF437YNA, ENCFF459FMQ, ENCFF867EUD 272234 ENCODE Processing Pipeline a2d1a7eae5af022297c6cc2aad79e718 https://www.encodeproject.org/files/ENCFF741PQE/@@download/ENCFF741PQE.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF459FMQ bed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF044HXX, ENCFF610PNU 5140513 ENCODE Processing Pipeline a52411af0307ccc27a6dcff39978455a https://www.encodeproject.org/files/ENCFF459FMQ/@@download/ENCFF459FMQ.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF130WVF bigBed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF437YNA 11564042 ENCODE Processing Pipeline b0bb26481831b581adffd96de3646ac0 https://www.encodeproject.org/files/ENCFF130WVF/@@download/ENCFF130WVF.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF543OML bigBed narrowPeak conservative idr thresholded peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF741PQE 512475 ENCODE Processing Pipeline 5733ea7462afa66ad733e082933a0c20 https://www.encodeproject.org/files/ENCFF543OML/@@download/ENCFF543OML.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF324QGE bed narrowPeak optimal idr thresholded peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF437YNA, ENCFF459FMQ, ENCFF867EUD 298604 ENCODE Processing Pipeline 4b2e12fbab0a9c49f8cbd58c03a1ec7a https://www.encodeproject.org/files/ENCFF324QGE/@@download/ENCFF324QGE.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF259AGF bigBed narrowPeak optimal idr thresholded peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF324QGE 550771 ENCODE Processing Pipeline 2985cce033aa78f1a757c603c0a6f61f https://www.encodeproject.org/files/ENCFF259AGF/@@download/ENCFF259AGF.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF832LOD bam unfiltered alignments ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF945VNK 1416943296 ENCODE Processing Pipeline 45a3da176d138bed96a90f895653563b https://www.encodeproject.org/files/ENCFF832LOD/@@download/ENCFF832LOD.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF895FUF bam alignments ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF945VNK 1066881075 ENCODE Processing Pipeline 8f5ab628afa3820e36b55776ec3ed063 https://www.encodeproject.org/files/ENCFF895FUF/@@download/ENCFF895FUF.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF153DJX bam unfiltered alignments ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 50 ENCFF765EAP, ENCFF807MUK 1833763570 ENCODE Processing Pipeline fee0f341f9f16f7410ba16c5fecfe9e1 https://www.encodeproject.org/files/ENCFF153DJX/@@download/ENCFF153DJX.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF430SMC bam alignments ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 50 ENCFF765EAP, ENCFF807MUK 1408379496 ENCODE Processing Pipeline 2f4cf0cf5bb6a1b6c333948e8edc3b5f https://www.encodeproject.org/files/ENCFF430SMC/@@download/ENCFF430SMC.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF719NGP bigWig signal p-value ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF321UJV, ENCFF430SMC 858362811 ENCODE Processing Pipeline 4f94e73d7d68174c0cb1ba9569e5f0cb https://www.encodeproject.org/files/ENCFF719NGP/@@download/ENCFF719NGP.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF058DKS bigWig signal p-value ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF321UJV, ENCFF430SMC, ENCFF895FUF 1407931314 ENCODE Processing Pipeline e83b7029262eabb00c7d34f9191c947e https://www.encodeproject.org/files/ENCFF058DKS/@@download/ENCFF058DKS.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF652XEH bigWig fold change over control ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF321UJV, ENCFF430SMC 891860032 ENCODE Processing Pipeline d43a5749be34f647dd343239d92054dc https://www.encodeproject.org/files/ENCFF652XEH/@@download/ENCFF652XEH.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF915UXV bigWig signal p-value ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF895FUF 703907090 ENCODE Processing Pipeline 20a5cb7651fbc7a2962f987a9bc9f1ec https://www.encodeproject.org/files/ENCFF915UXV/@@download/ENCFF915UXV.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF850YOC bigBed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF841RCY 11405587 ENCODE Processing Pipeline fde8ff85b94d03ed459dc65471ec7593 https://www.encodeproject.org/files/ENCFF850YOC/@@download/ENCFF850YOC.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF370EEL bigBed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF712EUK 13721144 ENCODE Processing Pipeline 0056ba836755161480d21097efece869 https://www.encodeproject.org/files/ENCFF370EEL/@@download/ENCFF370EEL.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF841RCY bed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF321UJV, ENCFF430SMC 5847826 ENCODE Processing Pipeline d07b88783c8b876b0981da2fa3a322b2 https://www.encodeproject.org/files/ENCFF841RCY/@@download/ENCFF841RCY.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF401XAV bigBed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF924RTU 11279303 ENCODE Processing Pipeline e73765af6265815491594125e819c710 https://www.encodeproject.org/files/ENCFF401XAV/@@download/ENCFF401XAV.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF207YNL bed narrowPeak optimal idr thresholded peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF712EUK, ENCFF841RCY, ENCFF924RTU 295835 ENCODE Processing Pipeline d9ed0e1afecb61a6948b1a641fbfa1b9 https://www.encodeproject.org/files/ENCFF207YNL/@@download/ENCFF207YNL.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF712EUK bed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF321UJV, ENCFF430SMC, ENCFF895FUF 6632917 ENCODE Processing Pipeline 349c881b669498a43cf50268f0826ffc https://www.encodeproject.org/files/ENCFF712EUK/@@download/ENCFF712EUK.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF419KAD bigBed narrowPeak optimal idr thresholded peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF207YNL 544333 ENCODE Processing Pipeline 50fd6b9ea522471c2d4e3d808bc7dcd1 https://www.encodeproject.org/files/ENCFF419KAD/@@download/ENCFF419KAD.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF924RTU bed narrowPeak peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF895FUF 5165733 ENCODE Processing Pipeline cc7d2a5f310991fd7605497aa85aba1e https://www.encodeproject.org/files/ENCFF924RTU/@@download/ENCFF924RTU.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF369SSM bigWig fold change over control ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF895FUF 519768985 ENCODE Processing Pipeline 7f0c7ab35d1e5bb8d8e143b94e487b08 https://www.encodeproject.org/files/ENCFF369SSM/@@download/ENCFF369SSM.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF319QZR bigWig fold change over control ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF321UJV, ENCFF430SMC, ENCFF895FUF 1286471139 ENCODE Processing Pipeline 15725af7631b9d2655f2b486dcec308c https://www.encodeproject.org/files/ENCFF319QZR/@@download/ENCFF319QZR.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF832YJX bed narrowPeak conservative idr thresholded peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF712EUK, ENCFF841RCY, ENCFF924RTU 271716 ENCODE Processing Pipeline cffa3d2d3bfc24ce1a10f17fae3f2cd5 https://www.encodeproject.org/files/ENCFF832YJX/@@download/ENCFF832YJX.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF942LCT bigBed narrowPeak conservative idr thresholded peaks ENCSR735KEY ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF832YJX 510280 ENCODE Processing Pipeline 3a5e7036bba15355f417d45036fe28d7 https://www.encodeproject.org/files/ENCFF942LCT/@@download/ENCFF942LCT.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF689WAA fastq reads ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1468649886 Richard Myers, HAIB 62b0ef4b2b344635f3136ff1ca554304 SRA:SRR5331412 https://www.encodeproject.org/files/ENCFF689WAA/@@download/ENCFF689WAA.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF972ZUD fastq reads ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1632201261 Richard Myers, HAIB df9d8ba1f15a5ddf1e4f7a88cbb7a0dd SRA:SRR5331411 https://www.encodeproject.org/files/ENCFF972ZUD/@@download/ENCFF972ZUD.fastq.gz HiSeq 2000 /files/ENCFF958NMQ/ released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF231XVC bigWig signal p-value ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF348RHT, ENCFF654EHF, ENCFF991UTU 969318594 ENCODE Processing Pipeline f9304c8165279a28f0e8a0712d40f21b https://www.encodeproject.org/files/ENCFF231XVC/@@download/ENCFF231XVC.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF512ZHO bigWig fold change over control ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF348RHT, ENCFF654EHF, ENCFF991UTU 976551385 ENCODE Processing Pipeline 88f4b4b676dfa9ab7e9d185e2912d3e5 https://www.encodeproject.org/files/ENCFF512ZHO/@@download/ENCFF512ZHO.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF077SLL bam unfiltered alignments ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF689WAA 1653166591 ENCODE Processing Pipeline 9841733b8e6536b8c193e672bfd709bb https://www.encodeproject.org/files/ENCFF077SLL/@@download/ENCFF077SLL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF032LDQ bam unfiltered alignments ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF972ZUD 1812441018 ENCODE Processing Pipeline c3651a63d4a01cae1242c6fb35d8ed17 https://www.encodeproject.org/files/ENCFF032LDQ/@@download/ENCFF032LDQ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF459VZA bam alignments ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF689WAA 1242049797 ENCODE Processing Pipeline eb1b076968d84e1b8aa8fb30479624a4 https://www.encodeproject.org/files/ENCFF459VZA/@@download/ENCFF459VZA.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF896BMA bam alignments ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF972ZUD 1350650959 ENCODE Processing Pipeline cc86e2283e0fd4914c9c42a236079383 https://www.encodeproject.org/files/ENCFF896BMA/@@download/ENCFF896BMA.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF581XVI bigWig fold change over control ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF459VZA, ENCFF995OIG 965282060 ENCODE Processing Pipeline 2ac140d8309e71565f0d748962dcd20e https://www.encodeproject.org/files/ENCFF581XVI/@@download/ENCFF581XVI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF572SMO bigWig signal p-value ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF896BMA, ENCFF995OIG 1018537190 ENCODE Processing Pipeline e6856d4d16bea3a156c14101f7add341 https://www.encodeproject.org/files/ENCFF572SMO/@@download/ENCFF572SMO.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF705BOD bigWig signal p-value ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF459VZA, ENCFF995OIG 1024615750 ENCODE Processing Pipeline c986323d1dc2b6d924021183de84e924 https://www.encodeproject.org/files/ENCFF705BOD/@@download/ENCFF705BOD.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF014IVZ bigWig signal p-value ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF459VZA, ENCFF896BMA, ENCFF995OIG 1211731646 ENCODE Processing Pipeline 8402c1d74068a32d81f60d9bda00ee87 https://www.encodeproject.org/files/ENCFF014IVZ/@@download/ENCFF014IVZ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF289VWJ bigWig fold change over control ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF896BMA, ENCFF995OIG 994950466 ENCODE Processing Pipeline 067d5817fddb1c39658689e0f96ccf88 https://www.encodeproject.org/files/ENCFF289VWJ/@@download/ENCFF289VWJ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF287ZYU bed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF459VZA, ENCFF995OIG 6372060 ENCODE Processing Pipeline cae1e5840857c3261e63df1d1c60383b https://www.encodeproject.org/files/ENCFF287ZYU/@@download/ENCFF287ZYU.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF711DHZ bed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF896BMA, ENCFF995OIG 6505930 ENCODE Processing Pipeline becbf4917110dfcb53e17a746deb8ab5 https://www.encodeproject.org/files/ENCFF711DHZ/@@download/ENCFF711DHZ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF528FTD bigWig fold change over control ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF459VZA, ENCFF896BMA, ENCFF995OIG 1437403571 ENCODE Processing Pipeline ecc6ccd3b704ab00c9cee2716ffd2408 https://www.encodeproject.org/files/ENCFF528FTD/@@download/ENCFF528FTD.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF199CZR bigBed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF711DHZ 13434923 ENCODE Processing Pipeline aac64b78fbf5fc6f65c8f3699a0f5aeb https://www.encodeproject.org/files/ENCFF199CZR/@@download/ENCFF199CZR.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF851EKF bed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF459VZA, ENCFF896BMA, ENCFF995OIG 6937787 ENCODE Processing Pipeline 97da319bce4bc1183675320de6ee33a3 https://www.encodeproject.org/files/ENCFF851EKF/@@download/ENCFF851EKF.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF595XKR bigBed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF851EKF 13406496 ENCODE Processing Pipeline d47f7f38566b79b010481189b52ceec2 https://www.encodeproject.org/files/ENCFF595XKR/@@download/ENCFF595XKR.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF711ERI bigBed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF287ZYU 13600666 ENCODE Processing Pipeline 6cfbbaae75a0d54cfe8300b1975e757f https://www.encodeproject.org/files/ENCFF711ERI/@@download/ENCFF711ERI.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF032ACV bed narrowPeak conservative idr thresholded peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF287ZYU, ENCFF419RSJ, ENCFF711DHZ, ENCFF851EKF 290972 ENCODE Processing Pipeline b8f77abc460e5837d39a790d0cdd7e11 https://www.encodeproject.org/files/ENCFF032ACV/@@download/ENCFF032ACV.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF420PED bed narrowPeak optimal idr thresholded peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF287ZYU, ENCFF419RSJ, ENCFF711DHZ, ENCFF851EKF 395502 ENCODE Processing Pipeline 3d5dd20165daa0d5bed3ae84f9143202 https://www.encodeproject.org/files/ENCFF420PED/@@download/ENCFF420PED.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF414YYJ bigBed narrowPeak conservative idr thresholded peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF032ACV 648723 ENCODE Processing Pipeline e008ab2b270375f7ad0e734cd3e70c0f https://www.encodeproject.org/files/ENCFF414YYJ/@@download/ENCFF414YYJ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF074YEK bigBed narrowPeak optimal idr thresholded peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF420PED 817651 ENCODE Processing Pipeline 7468186b9926d75dce7599c6bb9b4216 https://www.encodeproject.org/files/ENCFF074YEK/@@download/ENCFF074YEK.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF016FVB bam unfiltered alignments ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF972ZUD 1803103653 ENCODE Processing Pipeline 08e96c32ede12fb9fc8c48a1f719dc41 https://www.encodeproject.org/files/ENCFF016FVB/@@download/ENCFF016FVB.bam hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF763BJA bam alignments ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 50 ENCFF689WAA, ENCFF807MUK 1241881369 ENCODE Processing Pipeline c3b09e37d7c7595b888d84c1647962e0 https://www.encodeproject.org/files/ENCFF763BJA/@@download/ENCFF763BJA.bam hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF348RHT bam alignments ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF972ZUD 1350610150 ENCODE Processing Pipeline 2ca8451e5a57728ddc6225a97e085b91 https://www.encodeproject.org/files/ENCFF348RHT/@@download/ENCFF348RHT.bam hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF199WXN bam unfiltered alignments ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 50 ENCFF689WAA, ENCFF807MUK 1644472539 ENCODE Processing Pipeline 990d05493597c0607afb3e0ee9282cba https://www.encodeproject.org/files/ENCFF199WXN/@@download/ENCFF199WXN.bam hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF761SWJ bigWig signal p-value ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF654EHF, ENCFF763BJA, ENCFF991UTU 1085928959 ENCODE Processing Pipeline 46c484e92872ab201df3fec470456e46 https://www.encodeproject.org/files/ENCFF761SWJ/@@download/ENCFF761SWJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF345DXT bigWig signal p-value ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF348RHT, ENCFF654EHF, ENCFF763BJA, ENCFF991UTU 1223076573 ENCODE Processing Pipeline 1d9998b8ae96466f999aca0121021185 https://www.encodeproject.org/files/ENCFF345DXT/@@download/ENCFF345DXT.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF349LVY bigWig fold change over control ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF654EHF, ENCFF763BJA, ENCFF991UTU 979801664 ENCODE Processing Pipeline 539ae6c7fb907eb54812ad0b57a36945 https://www.encodeproject.org/files/ENCFF349LVY/@@download/ENCFF349LVY.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF117TPN bigBed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF755MSZ 13418175 ENCODE Processing Pipeline c26b625effc9df1ffac98224e808957a https://www.encodeproject.org/files/ENCFF117TPN/@@download/ENCFF117TPN.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF094XYL bigWig fold change over control ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF348RHT, ENCFF654EHF, ENCFF763BJA, ENCFF991UTU 1465280645 ENCODE Processing Pipeline dea36ce7240fa3db7c2c27a67738f510 https://www.encodeproject.org/files/ENCFF094XYL/@@download/ENCFF094XYL.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF755MSZ bed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF348RHT, ENCFF654EHF, ENCFF991UTU 6527404 ENCODE Processing Pipeline e09b319f1570533cfd2fd14888b6b00a https://www.encodeproject.org/files/ENCFF755MSZ/@@download/ENCFF755MSZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF148VNY bigBed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF063GQS 13540772 ENCODE Processing Pipeline 55f69fd3c2dc79a128b7a29c2e113839 https://www.encodeproject.org/files/ENCFF148VNY/@@download/ENCFF148VNY.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF063GQS bed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF654EHF, ENCFF763BJA, ENCFF991UTU 6364179 ENCODE Processing Pipeline 73c9e6ffd398f7b1525634dbeab99bbf https://www.encodeproject.org/files/ENCFF063GQS/@@download/ENCFF063GQS.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF235XPK bed narrowPeak conservative idr thresholded peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF063GQS, ENCFF567PTY, ENCFF755MSZ 292577 ENCODE Processing Pipeline e32374a877a24e550001db0ad7a791de https://www.encodeproject.org/files/ENCFF235XPK/@@download/ENCFF235XPK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF441ULY bigBed narrowPeak optimal idr thresholded peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF693FRV 814634 ENCODE Processing Pipeline 4e990e44939d05a13895380a9197a169 https://www.encodeproject.org/files/ENCFF441ULY/@@download/ENCFF441ULY.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF567PTY bed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF348RHT, ENCFF654EHF, ENCFF763BJA, ENCFF991UTU 6957449 ENCODE Processing Pipeline 0e16fc8da16c1df5c28d844be9e31860 https://www.encodeproject.org/files/ENCFF567PTY/@@download/ENCFF567PTY.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF411APS bigBed narrowPeak peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF567PTY 13398941 ENCODE Processing Pipeline 523351bc6e080830e2e5195388a614d6 https://www.encodeproject.org/files/ENCFF411APS/@@download/ENCFF411APS.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF014COI bigBed narrowPeak conservative idr thresholded peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF235XPK 649791 ENCODE Processing Pipeline 8c281890f13cb49b2a39e94741c249f5 https://www.encodeproject.org/files/ENCFF014COI/@@download/ENCFF014COI.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF693FRV bed narrowPeak optimal idr thresholded peaks ENCSR196HGZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF063GQS, ENCFF567PTY, ENCFF755MSZ 394305 ENCODE Processing Pipeline 433d0c39ff3942ba18f059f8a4b159d1 https://www.encodeproject.org/files/ENCFF693FRV/@@download/ENCFF693FRV.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption biological replicates with identical biosample ENCFF664SNF fastq reads ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1616448344 Richard Myers, HAIB 18d755c10b36ab8fb3c02166a51b2104 SRA:SRR6213050 https://www.encodeproject.org/files/ENCFF664SNF/@@download/ENCFF664SNF.fastq.gz HiSeq 2000 /files/ENCFF158AFC/ released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF745TQE fastq reads ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1466816356 Richard Myers, HAIB 0055ad4c0b4a9e35d827f8b2b144b49e SRA:SRR6213049 https://www.encodeproject.org/files/ENCFF745TQE/@@download/ENCFF745TQE.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF884TWU bam alignments ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 50 ENCFF664SNF, ENCFF807MUK 1398150013 ENCODE Processing Pipeline 0eff274c72fd2409f26303181d78e435 https://www.encodeproject.org/files/ENCFF884TWU/@@download/ENCFF884TWU.bam hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF640TLM bam alignments ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 50 ENCFF745TQE, ENCFF807MUK 1260026570 ENCODE Processing Pipeline 681f01dc38a7464e572a6063e1e12650 https://www.encodeproject.org/files/ENCFF640TLM/@@download/ENCFF640TLM.bam hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF778GHG bigWig signal p-value ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 ENCFF640TLM, ENCFF991UTU 687647397 ENCODE Processing Pipeline 6cae913d19757edd4d840b36100db5d6 https://www.encodeproject.org/files/ENCFF778GHG/@@download/ENCFF778GHG.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF009TZJ bigWig signal p-value ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF884TWU, ENCFF991UTU 1094273026 ENCODE Processing Pipeline 7146a977390167fe7e6edea864976b77 https://www.encodeproject.org/files/ENCFF009TZJ/@@download/ENCFF009TZJ.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF266GZH bigWig signal p-value ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF359TIO, ENCFF640TLM, ENCFF884TWU, ENCFF991UTU 1390404599 ENCODE Processing Pipeline 0c7baca611a66b534c4906b6eee984c1 https://www.encodeproject.org/files/ENCFF266GZH/@@download/ENCFF266GZH.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF622JDG bigWig fold change over control ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF884TWU, ENCFF991UTU 890286836 ENCODE Processing Pipeline 7f7b206ae4dbfabdc91f521462e53005 https://www.encodeproject.org/files/ENCFF622JDG/@@download/ENCFF622JDG.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF496UHH bigWig fold change over control ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 ENCFF640TLM, ENCFF991UTU 656046964 ENCODE Processing Pipeline 8889c8430fd2cc4efa252fcdc1f71813 https://www.encodeproject.org/files/ENCFF496UHH/@@download/ENCFF496UHH.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF499ABH bigWig fold change over control ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF359TIO, ENCFF640TLM, ENCFF884TWU, ENCFF991UTU 1371473595 ENCODE Processing Pipeline d3b6e95549ad8725710825514b1d9df2 https://www.encodeproject.org/files/ENCFF499ABH/@@download/ENCFF499ABH.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF962XMJ bigBed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 ENCFF955CAT 13628819 ENCODE Processing Pipeline bfb67737e20fec1ad828860c46fdce4b https://www.encodeproject.org/files/ENCFF962XMJ/@@download/ENCFF962XMJ.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF955CAT bed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 ENCFF640TLM, ENCFF991UTU 5885283 ENCODE Processing Pipeline f9b49f59d2a5715f533d621c7174e080 https://www.encodeproject.org/files/ENCFF955CAT/@@download/ENCFF955CAT.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF741KXN bed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF359TIO, ENCFF640TLM, ENCFF884TWU, ENCFF991UTU 6990554 ENCODE Processing Pipeline 5ab0e6411557f7726148cfcc45984f7b https://www.encodeproject.org/files/ENCFF741KXN/@@download/ENCFF741KXN.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF765FDF bed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF884TWU, ENCFF991UTU 6065050 ENCODE Processing Pipeline cea37fc6afa26cbcab480905cdd8deec https://www.encodeproject.org/files/ENCFF765FDF/@@download/ENCFF765FDF.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF561MIX bigBed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 ENCFF765FDF 11527816 ENCODE Processing Pipeline 430f9096788888393451b9a379903186 https://www.encodeproject.org/files/ENCFF561MIX/@@download/ENCFF561MIX.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF468CNW bigBed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF741KXN 13749797 ENCODE Processing Pipeline 734772640c9b77f411829d202c4a8a6c https://www.encodeproject.org/files/ENCFF468CNW/@@download/ENCFF468CNW.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF688KRR bam unfiltered alignments ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF745TQE 1658503012 ENCODE Processing Pipeline 484fc71dae7adc7b2a06c985e43214f2 https://www.encodeproject.org/files/ENCFF688KRR/@@download/ENCFF688KRR.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF922CEN bam unfiltered alignments ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF664SNF 1830495463 ENCODE Processing Pipeline d14795b5335ad05a9fe687d85e2e5c36 https://www.encodeproject.org/files/ENCFF922CEN/@@download/ENCFF922CEN.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF232XTK bam alignments ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF745TQE 1260248597 ENCODE Processing Pipeline 2ec9fb0a318518af3a8b5575169123b5 https://www.encodeproject.org/files/ENCFF232XTK/@@download/ENCFF232XTK.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF879HPF bam alignments ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF664SNF 1398449574 ENCODE Processing Pipeline ab75d11a6d15b3cc450f3bc1fb58eb01 https://www.encodeproject.org/files/ENCFF879HPF/@@download/ENCFF879HPF.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF775EWF bigWig signal p-value ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 ENCFF232XTK, ENCFF370PSF 682689154 ENCODE Processing Pipeline c95b1b4f7cd8156ad5b5a897c78477be https://www.encodeproject.org/files/ENCFF775EWF/@@download/ENCFF775EWF.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF489QJM bigWig signal p-value ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF879HPF, ENCFF985NSN 978826013 ENCODE Processing Pipeline 8e52af5c0fb69c1c6724217c2ce37b01 https://www.encodeproject.org/files/ENCFF489QJM/@@download/ENCFF489QJM.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF748PDZ bigWig signal p-value ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF232XTK, ENCFF370PSF, ENCFF879HPF, ENCFF985NSN 1417067981 ENCODE Processing Pipeline 4e59a6f4f1a82908d7a29916f4af9a54 https://www.encodeproject.org/files/ENCFF748PDZ/@@download/ENCFF748PDZ.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF977GRQ bigWig fold change over control ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 ENCFF232XTK, ENCFF370PSF 658539194 ENCODE Processing Pipeline fc42e6562cd260bf67c2affab14467ac https://www.encodeproject.org/files/ENCFF977GRQ/@@download/ENCFF977GRQ.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF442IIA bigWig fold change over control ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF879HPF, ENCFF985NSN 878253345 ENCODE Processing Pipeline 3b83ebb92073128edc1690170513a2b6 https://www.encodeproject.org/files/ENCFF442IIA/@@download/ENCFF442IIA.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF794EAC bigWig fold change over control ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF232XTK, ENCFF370PSF, ENCFF879HPF, ENCFF985NSN 1392756481 ENCODE Processing Pipeline ea7f4684191eddf0fc3d534fdfdc8b42 https://www.encodeproject.org/files/ENCFF794EAC/@@download/ENCFF794EAC.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF498RYU bigBed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 ENCFF512ZCE 11527570 ENCODE Processing Pipeline dd235f5e1355e1642a21b338c0db9cbd https://www.encodeproject.org/files/ENCFF498RYU/@@download/ENCFF498RYU.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF512ZCE bed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF879HPF, ENCFF985NSN 5830937 ENCODE Processing Pipeline 0b23384631fb347e209a621edc6ed6c6 https://www.encodeproject.org/files/ENCFF512ZCE/@@download/ENCFF512ZCE.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF593OTD bed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 ENCFF232XTK, ENCFF370PSF 5612433 ENCODE Processing Pipeline 70cac51e074c076bdd2bab7e0fc5b16b https://www.encodeproject.org/files/ENCFF593OTD/@@download/ENCFF593OTD.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF173XPM bed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF232XTK, ENCFF370PSF, ENCFF879HPF, ENCFF985NSN 6801061 ENCODE Processing Pipeline 5192cff46e49b69fc961bca21976bd56 https://www.encodeproject.org/files/ENCFF173XPM/@@download/ENCFF173XPM.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF934OBZ bigBed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 2 ENCFF593OTD 13577386 ENCODE Processing Pipeline 522f7e1e78a1cb72406def2a2c153ef6 https://www.encodeproject.org/files/ENCFF934OBZ/@@download/ENCFF934OBZ.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF003LQV bigBed narrowPeak peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF173XPM 13766237 ENCODE Processing Pipeline d62af6a0f86f960920561394dbb7b9c4 https://www.encodeproject.org/files/ENCFF003LQV/@@download/ENCFF003LQV.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF919RRZ bigBed narrowPeak conservative idr thresholded peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF185IMR 825749 ENCODE Processing Pipeline 92d943d1c449e233833e1849714a881a https://www.encodeproject.org/files/ENCFF919RRZ/@@download/ENCFF919RRZ.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF497MUF bed narrowPeak optimal idr thresholded peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF173XPM, ENCFF419RSJ, ENCFF512ZCE, ENCFF593OTD 391277 ENCODE Processing Pipeline caa63c49a43c3dcf6762dcbea15dd46d https://www.encodeproject.org/files/ENCFF497MUF/@@download/ENCFF497MUF.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF185IMR bed narrowPeak conservative idr thresholded peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF173XPM, ENCFF419RSJ, ENCFF512ZCE, ENCFF593OTD 381393 ENCODE Processing Pipeline 026bcb6c662b47e9cbd7abb6b35ae4b8 https://www.encodeproject.org/files/ENCFF185IMR/@@download/ENCFF185IMR.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF293UCA bigBed narrowPeak optimal idr thresholded peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF497MUF 844128 ENCODE Processing Pipeline fb770b8c87dee713be8351be7bb849ea https://www.encodeproject.org/files/ENCFF293UCA/@@download/ENCFF293UCA.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF073RTE bigBed narrowPeak conservative idr thresholded peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF029BXB 589066 ENCODE Processing Pipeline 0abacc93dc1a66989155c068c5828f12 https://www.encodeproject.org/files/ENCFF073RTE/@@download/ENCFF073RTE.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF862NGG bed narrowPeak optimal idr thresholded peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF741KXN, ENCFF765FDF, ENCFF955CAT 332417 ENCODE Processing Pipeline d7918ac7abf430b1367f587b576211a2 https://www.encodeproject.org/files/ENCFF862NGG/@@download/ENCFF862NGG.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF029BXB bed narrowPeak conservative idr thresholded peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF741KXN, ENCFF765FDF, ENCFF955CAT 322213 ENCODE Processing Pipeline 396c75069622dc5923a29337258109d8 https://www.encodeproject.org/files/ENCFF029BXB/@@download/ENCFF029BXB.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF651DRR bigBed narrowPeak optimal idr thresholded peaks ENCSR297GII ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4G-human ENCAB000AHQ DNA False 2016-06-30 ENCODE 1, 2 ENCFF862NGG 602316 ENCODE Processing Pipeline 50065e2f1eb4449e5abecc83d0b02eab https://www.encodeproject.org/files/ENCFF651DRR/@@download/ENCFF651DRR.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF768AUO fastq reads ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF620QLM 1809642340 Richard Myers, HAIB 573bbf4a8784979ece8e9d07d534082f https://www.encodeproject.org/files/ENCFF768AUO/@@download/ENCFF768AUO.fastq.gz HiSeq 2000 /files/ENCFF269BTX/ released antibody characterized with exemption experiment not submitted to GEO ENCFF620QLM fastq reads ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF768AUO 1834903466 Richard Myers, HAIB e328535036c614b800c8a2c4308d8ebb https://www.encodeproject.org/files/ENCFF620QLM/@@download/ENCFF620QLM.fastq.gz HiSeq 2000 /files/ENCFF605FUW/ released antibody characterized with exemption experiment not submitted to GEO ENCFF913HVU bam unfiltered alignments ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF620QLM, ENCFF768AUO, ENCFF807MUK 4280026493 ENCODE Processing Pipeline 9f798f97617480aec82ddff83e73e837 https://www.encodeproject.org/files/ENCFF913HVU/@@download/ENCFF913HVU.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF771VGT bam alignments ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF620QLM, ENCFF768AUO, ENCFF807MUK 3318991548 ENCODE Processing Pipeline c382992042e15d4ff85608bdb6033bba https://www.encodeproject.org/files/ENCFF771VGT/@@download/ENCFF771VGT.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF237VET bam unfiltered alignments ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF620QLM, ENCFF643CGH, ENCFF768AUO 4290339588 ENCODE Processing Pipeline e3ea2204234b944822af9d015c5aa44b https://www.encodeproject.org/files/ENCFF237VET/@@download/ENCFF237VET.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF314TJA bam alignments ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF620QLM, ENCFF643CGH, ENCFF768AUO 3318810180 ENCODE Processing Pipeline f1e3a0033b39245f8bf8825958b66b63 https://www.encodeproject.org/files/ENCFF314TJA/@@download/ENCFF314TJA.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF378ATP bigWig signal p-value ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF314TJA, ENCFF858COI 1065720504 ENCODE Processing Pipeline c31df4a702240b619ed0c61037a3a218 https://www.encodeproject.org/files/ENCFF378ATP/@@download/ENCFF378ATP.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF149NUT bigWig fold change over control ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF314TJA, ENCFF858COI 993337420 ENCODE Processing Pipeline 0cb1962539fe55cc15148764d43b48ee https://www.encodeproject.org/files/ENCFF149NUT/@@download/ENCFF149NUT.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF248DZQ bed narrowPeak peaks ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF314TJA, ENCFF858COI 6865641 ENCODE Processing Pipeline 7b7178fd424497b0c17f2edcd73929fc https://www.encodeproject.org/files/ENCFF248DZQ/@@download/ENCFF248DZQ.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF558DNJ bigBed narrowPeak peaks ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF248DZQ 13417624 ENCODE Processing Pipeline e6118213bdbc07e2a4f594c6603555b0 https://www.encodeproject.org/files/ENCFF558DNJ/@@download/ENCFF558DNJ.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF956LUK bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF679KFK 1823799 ENCODE Processing Pipeline eea98d0adb98f68984e5a8aca8718daf https://www.encodeproject.org/files/ENCFF956LUK/@@download/ENCFF956LUK.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF679KFK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF248DZQ, ENCFF419RSJ 992030 ENCODE Processing Pipeline 3b33b52a3eea86ec3aa3e0dd27013b2a https://www.encodeproject.org/files/ENCFF679KFK/@@download/ENCFF679KFK.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF271HCA bigWig signal p-value ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF771VGT, ENCFF962NQY 1062736647 ENCODE Processing Pipeline b4d9a9c68ffd98aba4516dac6d1dac50 https://www.encodeproject.org/files/ENCFF271HCA/@@download/ENCFF271HCA.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF682YKY bigWig fold change over control ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF771VGT, ENCFF962NQY 992968182 ENCODE Processing Pipeline 23f56bbe0415647f18b961e27149f268 https://www.encodeproject.org/files/ENCFF682YKY/@@download/ENCFF682YKY.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF111FTU bed narrowPeak peaks ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF771VGT, ENCFF962NQY 6832982 ENCODE Processing Pipeline 460550f5956928e515dcffe7d9a9ec34 https://www.encodeproject.org/files/ENCFF111FTU/@@download/ENCFF111FTU.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF491SAX bigBed narrowPeak peaks ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF111FTU 13369553 ENCODE Processing Pipeline 836b23dd98e6d47a7c69ea1e61242044 https://www.encodeproject.org/files/ENCFF491SAX/@@download/ENCFF491SAX.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF760XJE bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF111FTU 980001 ENCODE Processing Pipeline 8ce0c0b06077545f9501f64b15b8ff6c https://www.encodeproject.org/files/ENCFF760XJE/@@download/ENCFF760XJE.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF158RBQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR442ZTI ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF760XJE 1804303 ENCODE Processing Pipeline 727fa3cea4e9d7b793d1e1c25835e9f4 https://www.encodeproject.org/files/ENCFF158RBQ/@@download/ENCFF158RBQ.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF000PHI bam alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PIE 1560236360 Richard Myers, HAIB dd243cbc9dc2e44b7d875a88b2924b17 https://www.encodeproject.org/files/ENCFF000PHI/@@download/ENCFF000PHI.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PHJ bigBed broadPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFS 1245792 Richard Myers, HAIB cdaa3c4f9a5c48ef8976dc380661e942 https://www.encodeproject.org/files/ENCFF000PHJ/@@download/ENCFF000PHJ.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PHK bigBed broadPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFT 472677 Richard Myers, HAIB 2321f7c5cdf7e4827610c72796efd890 https://www.encodeproject.org/files/ENCFF000PHK/@@download/ENCFF000PHK.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PHL bam alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PHU 736764597 Richard Myers, HAIB 9b502f8afeba750f38cdf8d6fa1e9c8f https://www.encodeproject.org/files/ENCFF000PHL/@@download/ENCFF000PHL.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PHN bigWig raw signal ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 1 83047369 Richard Myers, HAIB 58727588d15f089f1c64af7277aad887 https://www.encodeproject.org/files/ENCFF000PHN/@@download/ENCFF000PHN.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PHO bigWig raw signal ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 1 16863140 Richard Myers, HAIB f5755ea8b550ca7ad840b2c9878779bc https://www.encodeproject.org/files/ENCFF000PHO/@@download/ENCFF000PHO.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PHU fastq reads ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 730877897 Richard Myers, HAIB e5a91c6566576b4a4bbc6876b96ed744 https://www.encodeproject.org/files/ENCFF000PHU/@@download/ENCFF000PHU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POH/ released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PIE fastq reads ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 2137911722 Richard Myers, HAIB c230b61b718ee46a331c1a5e7ef5c452 https://www.encodeproject.org/files/ENCFF000PIE/@@download/ENCFF000PIE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF001UFS bed broadPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 1 709890 Richard Myers, HAIB cc8e88ab4a1edf7f6c2598ee3b7f29cf https://www.encodeproject.org/files/ENCFF001UFS/@@download/ENCFF001UFS.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UFT bed broadPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 1 277340 Richard Myers, HAIB 62ccec4cef6fac19fa88ab5041a89df1 https://www.encodeproject.org/files/ENCFF001UFT/@@download/ENCFF001UFT.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CKH bed narrowPeak optimal idr thresholded peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 630365 ENCODE Consortium Analysis Working Group dadb42dd9dc14b87216f6e61eb55680e https://www.encodeproject.org/files/ENCFF002CKH/@@download/ENCFF002CKH.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF654LDO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE ENCFF002CKH 1513295 ENCODE Consortium 0ef784bcc6cc3a1ce182b3760d38d998 https://www.encodeproject.org/files/ENCFF654LDO/@@download/ENCFF654LDO.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF953PCA bam alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHU, ENCFF643CGH 572730653 ENCODE Processing Pipeline cd368ed1e21594ced259d621f8b7f36c https://www.encodeproject.org/files/ENCFF953PCA/@@download/ENCFF953PCA.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF239IWS bam unfiltered alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHU, ENCFF643CGH 950029523 ENCODE Processing Pipeline b67229581dc4c227c5c941ae5b713c73 https://www.encodeproject.org/files/ENCFF239IWS/@@download/ENCFF239IWS.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF185DVY bam alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIE, ENCFF643CGH 1118691745 ENCODE Processing Pipeline 64d8770e8ee64aba620cf0062ac2fd79 https://www.encodeproject.org/files/ENCFF185DVY/@@download/ENCFF185DVY.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF080OMA bam unfiltered alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIE, ENCFF643CGH 2573531518 ENCODE Processing Pipeline bd4a19f2a5a3c0479b6215f5ddfe458b https://www.encodeproject.org/files/ENCFF080OMA/@@download/ENCFF080OMA.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF371RAV bam unfiltered alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHU, ENCFF807MUK 947025131 ENCODE Processing Pipeline ae1ff5e8f11b1c7be94949bc34a59281 https://www.encodeproject.org/files/ENCFF371RAV/@@download/ENCFF371RAV.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF763XIK bam alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHU, ENCFF807MUK 573112581 ENCODE Processing Pipeline abba2cd6a46df9f9d407be158382912e https://www.encodeproject.org/files/ENCFF763XIK/@@download/ENCFF763XIK.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF495TMD bam unfiltered alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIE, ENCFF807MUK 2567015045 ENCODE Processing Pipeline 504734c83390710e89a0a225496d04a0 https://www.encodeproject.org/files/ENCFF495TMD/@@download/ENCFF495TMD.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF015KCD bam alignments ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIE, ENCFF807MUK 1119270721 ENCODE Processing Pipeline 8199ec0ca5deabe808f71a0354b709fb https://www.encodeproject.org/files/ENCFF015KCD/@@download/ENCFF015KCD.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF654CHW bigWig signal p-value ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF943DZB, ENCFF953PCA 520424697 ENCODE Processing Pipeline cbd58dc88f5156527de942bddb1e8080 https://www.encodeproject.org/files/ENCFF654CHW/@@download/ENCFF654CHW.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF672WAO bigWig signal p-value ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF185DVY, ENCFF193YIO, ENCFF943DZB 580510992 ENCODE Processing Pipeline cbb0175b853c70574f9bacee2c77052f https://www.encodeproject.org/files/ENCFF672WAO/@@download/ENCFF672WAO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF994BKW bigWig fold change over control ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF943DZB, ENCFF953PCA 370623230 ENCODE Processing Pipeline dae016977b23715b63c5578916709bce https://www.encodeproject.org/files/ENCFF994BKW/@@download/ENCFF994BKW.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF655PGJ bigWig signal p-value ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF185DVY, ENCFF193YIO, ENCFF943DZB, ENCFF953PCA 743617561 ENCODE Processing Pipeline 79622ab9cccd22a2ac278e1b79406054 https://www.encodeproject.org/files/ENCFF655PGJ/@@download/ENCFF655PGJ.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF630OJD bigWig fold change over control ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF185DVY, ENCFF193YIO, ENCFF943DZB 531816146 ENCODE Processing Pipeline a31b0e4e3150d25976ac53eecdb3bb9e https://www.encodeproject.org/files/ENCFF630OJD/@@download/ENCFF630OJD.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF155UGM bed narrowPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF185DVY, ENCFF193YIO, ENCFF943DZB 5807323 ENCODE Processing Pipeline 105fa7486f47865c2d00fea27ecd66e0 https://www.encodeproject.org/files/ENCFF155UGM/@@download/ENCFF155UGM.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF651QYC bed narrowPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF185DVY, ENCFF193YIO, ENCFF943DZB, ENCFF953PCA 6347855 ENCODE Processing Pipeline 707ba18bd753ec3c4ef712c63b24f734 https://www.encodeproject.org/files/ENCFF651QYC/@@download/ENCFF651QYC.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF858SNG bigWig fold change over control ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF185DVY, ENCFF193YIO, ENCFF943DZB, ENCFF953PCA 731987193 ENCODE Processing Pipeline 55e9be8b77f11b668ab45d014ce99407 https://www.encodeproject.org/files/ENCFF858SNG/@@download/ENCFF858SNG.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF475KOQ bed narrowPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF943DZB, ENCFF953PCA 4652850 ENCODE Processing Pipeline f19b50011bf282d7336efb028f6f45a2 https://www.encodeproject.org/files/ENCFF475KOQ/@@download/ENCFF475KOQ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF821RQJ bigBed narrowPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF475KOQ 10852831 ENCODE Processing Pipeline a1781019657d6880d6c278669a3f36b6 https://www.encodeproject.org/files/ENCFF821RQJ/@@download/ENCFF821RQJ.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF630IDY bed narrowPeak conservative idr thresholded peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF155UGM, ENCFF419RSJ, ENCFF475KOQ, ENCFF651QYC 363592 ENCODE Processing Pipeline 573974795927471654cf0c74f704b19d https://www.encodeproject.org/files/ENCFF630IDY/@@download/ENCFF630IDY.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF054ESU bed narrowPeak optimal idr thresholded peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF155UGM, ENCFF419RSJ, ENCFF475KOQ, ENCFF651QYC 532266 ENCODE Processing Pipeline 1ca84ed0fece336874b20ee78ed660ba https://www.encodeproject.org/files/ENCFF054ESU/@@download/ENCFF054ESU.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF461JVX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF630IDY 709115 ENCODE Processing Pipeline 239dd2ca5d2b94d86b5eedecf2756d5f https://www.encodeproject.org/files/ENCFF461JVX/@@download/ENCFF461JVX.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF613QAN bigBed narrowPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF155UGM 13122269 ENCODE Processing Pipeline 8630589e39120fa9762205c4f14d1ab8 https://www.encodeproject.org/files/ENCFF613QAN/@@download/ENCFF613QAN.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF400GZN bigBed narrowPeak peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF651QYC 13566408 ENCODE Processing Pipeline 787ea3006b2dadcde3b7da21f3eb572c https://www.encodeproject.org/files/ENCFF400GZN/@@download/ENCFF400GZN.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF057YZB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOSL2-human ENCAB000AGL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF054ESU 926691 ENCODE Processing Pipeline 2a4c135ebf94c5732376cb027e4a018e https://www.encodeproject.org/files/ENCFF057YZB/@@download/ENCFF057YZB.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000OWF bigBed broadPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UDC 829287 Richard Myers, HAIB d7c1f62030d05ea26428034c1fc90342 https://www.encodeproject.org/files/ENCFF000OWF/@@download/ENCFF000OWF.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OWG bam alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OWS 1020143301 Richard Myers, HAIB b4ca287396605cfaac01f9e5b5df4166 https://www.encodeproject.org/files/ENCFF000OWG/@@download/ENCFF000OWG.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OWH bigBed broadPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UDD 635413 Richard Myers, HAIB 729cd361e9710221bfdb4ec0bf4aa2b2 https://www.encodeproject.org/files/ENCFF000OWH/@@download/ENCFF000OWH.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OWI bam alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OWO 501628262 Richard Myers, HAIB d3adec98052379741dff3e89b2803599 https://www.encodeproject.org/files/ENCFF000OWI/@@download/ENCFF000OWI.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OWJ bigWig raw signal ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 25980156 Richard Myers, HAIB d958a8dc62dd1e13ad9a849effe1c45a https://www.encodeproject.org/files/ENCFF000OWJ/@@download/ENCFF000OWJ.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OWK bigWig raw signal ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 12245361 Richard Myers, HAIB 7247664faccd8ed7895bc234716272e3 https://www.encodeproject.org/files/ENCFF000OWK/@@download/ENCFF000OWK.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OWO fastq reads ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 398762603 Richard Myers, HAIB 282939210c0bdd3d05dafdec94c10c52 https://www.encodeproject.org/files/ENCFF000OWO/@@download/ENCFF000OWO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OWS fastq reads ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 931834586 Richard Myers, HAIB a7ac06b1faa3a866b6e2b2aa529a3f8b https://www.encodeproject.org/files/ENCFF000OWS/@@download/ENCFF000OWS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UDC bed broadPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 483555 Richard Myers, HAIB 6cdb7ce2745808a83f385e8f6cc840c7 https://www.encodeproject.org/files/ENCFF001UDC/@@download/ENCFF001UDC.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UDD bed broadPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 372628 Richard Myers, HAIB dfe0018cf644093a2d912b0d3bf93b23 https://www.encodeproject.org/files/ENCFF001UDD/@@download/ENCFF001UDD.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CJT bed narrowPeak optimal idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 360295 ENCODE Consortium Analysis Working Group 4b11a8fb4cb32982db9903bb88c63fd5 https://www.encodeproject.org/files/ENCFF002CJT/@@download/ENCFF002CJT.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF942HWY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE ENCFF002CJT 704764 ENCODE Consortium 7c3ace74466528ef4ea591c64812dc55 https://www.encodeproject.org/files/ENCFF942HWY/@@download/ENCFF942HWY.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF972SQO bam alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OWO, ENCFF643CGH 350529840 ENCODE Processing Pipeline f85f3cdc35482e6e53d5d25d074cc1ad https://www.encodeproject.org/files/ENCFF972SQO/@@download/ENCFF972SQO.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF770GTP bam unfiltered alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OWO, ENCFF643CGH 582693437 ENCODE Processing Pipeline 66727e09d5a928ed84ae0b6f93716d47 https://www.encodeproject.org/files/ENCFF770GTP/@@download/ENCFF770GTP.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF184GCE bam unfiltered alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OWS, ENCFF643CGH 1282914486 ENCODE Processing Pipeline aed37ad508deb29088415251ef06a1d0 https://www.encodeproject.org/files/ENCFF184GCE/@@download/ENCFF184GCE.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF489EBO bam alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OWS, ENCFF643CGH 770713385 ENCODE Processing Pipeline e6587ac13aa2670108dccd41c1bf49d9 https://www.encodeproject.org/files/ENCFF489EBO/@@download/ENCFF489EBO.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF426NNP bam alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OWO, ENCFF807MUK 350839452 ENCODE Processing Pipeline bc797ddb2afbf4c25b14701f0559339e https://www.encodeproject.org/files/ENCFF426NNP/@@download/ENCFF426NNP.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF255KGJ bam unfiltered alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OWO, ENCFF807MUK 581104585 ENCODE Processing Pipeline 1e3e335dddd0d8c321d5cf55dc0ab7fe https://www.encodeproject.org/files/ENCFF255KGJ/@@download/ENCFF255KGJ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF248KXX bam unfiltered alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OWS, ENCFF807MUK 1278832416 ENCODE Processing Pipeline 343e20451b2ad84f7467e1c3bcdd612c https://www.encodeproject.org/files/ENCFF248KXX/@@download/ENCFF248KXX.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF454STL bam alignments ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OWS, ENCFF807MUK 771152448 ENCODE Processing Pipeline 29c2e61b664d9712c9711789e7aca064 https://www.encodeproject.org/files/ENCFF454STL/@@download/ENCFF454STL.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF371JOS bigWig signal p-value ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF489EBO, ENCFF948LKH, ENCFF972SQO 553631265 ENCODE Processing Pipeline a19c2da8b3d8ad41f43c5ce5cbaa7a01 https://www.encodeproject.org/files/ENCFF371JOS/@@download/ENCFF371JOS.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF609AFO bigWig signal p-value ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF489EBO, ENCFF948LKH 596581585 ENCODE Processing Pipeline ec3087cc3385ff21d93c74fc8fdc1972 https://www.encodeproject.org/files/ENCFF609AFO/@@download/ENCFF609AFO.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF043CXM bigWig signal p-value ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF948LKH, ENCFF972SQO 380540801 ENCODE Processing Pipeline 2a8385af6fc82fe45ea15b6c2ee832d2 https://www.encodeproject.org/files/ENCFF043CXM/@@download/ENCFF043CXM.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF515UYM bigWig fold change over control ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF489EBO, ENCFF948LKH 423163579 ENCODE Processing Pipeline 5cb8b62679ca37f0f9f5a7650f15a443 https://www.encodeproject.org/files/ENCFF515UYM/@@download/ENCFF515UYM.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF170XRZ bigWig fold change over control ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF948LKH, ENCFF972SQO 241567235 ENCODE Processing Pipeline ff043ca720711644e15cb0fbc805af51 https://www.encodeproject.org/files/ENCFF170XRZ/@@download/ENCFF170XRZ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF851XYO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF183HLJ 672544 ENCODE Processing Pipeline 44e53c5d97ff039e367d52c3d063251b https://www.encodeproject.org/files/ENCFF851XYO/@@download/ENCFF851XYO.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF509GYP bed narrowPeak optimal idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF150MFX, ENCFF419RSJ, ENCFF551XHS, ENCFF683FDT 425257 ENCODE Processing Pipeline 60a16f0e4b44bad618dd6a05511bde2d https://www.encodeproject.org/files/ENCFF509GYP/@@download/ENCFF509GYP.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF683FDT bed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF948LKH, ENCFF972SQO 5167712 ENCODE Processing Pipeline afc598864ba5ffca0f5076adb4a7b0dc https://www.encodeproject.org/files/ENCFF683FDT/@@download/ENCFF683FDT.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF722XPG bigBed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF551XHS 13571948 ENCODE Processing Pipeline 3ff5ad1d7d8311f937b123eba54ed040 https://www.encodeproject.org/files/ENCFF722XPG/@@download/ENCFF722XPG.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF183HLJ bed narrowPeak conservative idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF150MFX, ENCFF419RSJ, ENCFF551XHS, ENCFF683FDT 350613 ENCODE Processing Pipeline 12d520114e5adaff8c6181509d7c0e0c https://www.encodeproject.org/files/ENCFF183HLJ/@@download/ENCFF183HLJ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF406PYH bigWig fold change over control ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF489EBO, ENCFF948LKH, ENCFF972SQO 577205328 ENCODE Processing Pipeline efaa1b6af3efd5c97ee6ec687621772b https://www.encodeproject.org/files/ENCFF406PYH/@@download/ENCFF406PYH.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF150MFX bed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF489EBO, ENCFF948LKH 5395128 ENCODE Processing Pipeline 96dc6bbd3466f8c3b6108bd82fffc829 https://www.encodeproject.org/files/ENCFF150MFX/@@download/ENCFF150MFX.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF551XHS bed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF489EBO, ENCFF948LKH, ENCFF972SQO 6128528 ENCODE Processing Pipeline 2ce08eeda1d191be27f7fa192e2f18c5 https://www.encodeproject.org/files/ENCFF551XHS/@@download/ENCFF551XHS.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF773JAW bigBed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF683FDT 10763975 ENCODE Processing Pipeline 09669d80b4e3be3857d6d390447dde8d https://www.encodeproject.org/files/ENCFF773JAW/@@download/ENCFF773JAW.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF692LLO bigBed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF150MFX 11335578 ENCODE Processing Pipeline ad489377a2c153f0ed7fb4dcf5a16dd3 https://www.encodeproject.org/files/ENCFF692LLO/@@download/ENCFF692LLO.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF397GOK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF509GYP 776347 ENCODE Processing Pipeline 6a9348e0bab66e830878cf9dbc9f3a89 https://www.encodeproject.org/files/ENCFF397GOK/@@download/ENCFF397GOK.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF170RCN bigWig signal p-value ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF454STL 590999062 ENCODE Processing Pipeline 7ada25d0e443bf994b0bc6f03990a91d https://www.encodeproject.org/files/ENCFF170RCN/@@download/ENCFF170RCN.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF319BAS bigWig signal p-value ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF426NNP 426735137 ENCODE Processing Pipeline 0b96cd0924f88038cfb8e07796fabfec https://www.encodeproject.org/files/ENCFF319BAS/@@download/ENCFF319BAS.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF921YQK bigWig fold change over control ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF454STL 423828339 ENCODE Processing Pipeline f126cc954d12b00e4e087b2b8f4048cb https://www.encodeproject.org/files/ENCFF921YQK/@@download/ENCFF921YQK.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF602VCI bigWig signal p-value ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF426NNP, ENCFF454STL 553853635 ENCODE Processing Pipeline a0e764289ef177dad299fcbb8715ab75 https://www.encodeproject.org/files/ENCFF602VCI/@@download/ENCFF602VCI.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF122RUW bigWig fold change over control ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF426NNP 241289942 ENCODE Processing Pipeline 8d0d12b569eb1f32df546fa02aa3b024 https://www.encodeproject.org/files/ENCFF122RUW/@@download/ENCFF122RUW.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF535RGW bed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF454STL 5341872 ENCODE Processing Pipeline bf292408039660e5ac574d732e4902ee https://www.encodeproject.org/files/ENCFF535RGW/@@download/ENCFF535RGW.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF053TTQ bigBed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF535RGW 11265383 ENCODE Processing Pipeline 3f3d8c9b9fd4aaa651f65c59b1b4918f https://www.encodeproject.org/files/ENCFF053TTQ/@@download/ENCFF053TTQ.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF484OSG bigWig fold change over control ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF426NNP, ENCFF454STL 579879541 ENCODE Processing Pipeline 9b64dfe3447fdec02d73dd6ec94ecb36 https://www.encodeproject.org/files/ENCFF484OSG/@@download/ENCFF484OSG.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF654AYS bed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF426NNP 5190525 ENCODE Processing Pipeline 22b797f93b9ba6e5c6e378848d333642 https://www.encodeproject.org/files/ENCFF654AYS/@@download/ENCFF654AYS.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF052MDZ bed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF426NNP, ENCFF454STL 6093207 ENCODE Processing Pipeline 71b3fe5c5da2f07c683bbc662dc74334 https://www.encodeproject.org/files/ENCFF052MDZ/@@download/ENCFF052MDZ.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF686VJY bed narrowPeak optimal idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF052MDZ, ENCFF535RGW, ENCFF654AYS 425021 ENCODE Processing Pipeline 528631c3a11fa1a1f12c9340d582e94c https://www.encodeproject.org/files/ENCFF686VJY/@@download/ENCFF686VJY.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF976TDK bigBed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF052MDZ 13541054 ENCODE Processing Pipeline c7b1c8c4eb8e57b7be25e57954efd690 https://www.encodeproject.org/files/ENCFF976TDK/@@download/ENCFF976TDK.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF369MLU bigBed narrowPeak peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF654AYS 10788047 ENCODE Processing Pipeline d52bdc11533d66e09f5cefe8264d61ea https://www.encodeproject.org/files/ENCFF369MLU/@@download/ENCFF369MLU.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF724MKH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF686VJY 774346 ENCODE Processing Pipeline 547011da72018f4bd27147ff7b6cfe57 https://www.encodeproject.org/files/ENCFF724MKH/@@download/ENCFF724MKH.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF979BJT bed narrowPeak conservative idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF052MDZ, ENCFF535RGW, ENCFF654AYS 347636 ENCODE Processing Pipeline e21eb9a186e55cc449abd636869a33a9 https://www.encodeproject.org/files/ENCFF979BJT/@@download/ENCFF979BJT.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF788MMJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF979BJT 665896 ENCODE Processing Pipeline dc68a8b4a18c0cafe5d633421d5dd1b4 https://www.encodeproject.org/files/ENCFF788MMJ/@@download/ENCFF788MMJ.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PNE bam alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PNM 434234031 Richard Myers, HAIB 862783b386ad4667c3c2abc78788f4d3 https://www.encodeproject.org/files/ENCFF000PNE/@@download/ENCFF000PNE.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PNF bigBed broadPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHE 827381 Richard Myers, HAIB ab913dfd1ba87b5730ab19822c430f21 https://www.encodeproject.org/files/ENCFF000PNF/@@download/ENCFF000PNF.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PNG bigBed broadPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHF 956343 Richard Myers, HAIB 6f5fabbc1d92a0858a11729732b58526 https://www.encodeproject.org/files/ENCFF000PNG/@@download/ENCFF000PNG.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PNH bam alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PNT 1226363901 Richard Myers, HAIB 9819402942eba931d0b376af7ddabc93 https://www.encodeproject.org/files/ENCFF000PNH/@@download/ENCFF000PNH.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PNJ bigWig raw signal ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 45236826 Richard Myers, HAIB 0de2373773795528cc106d36c9d22c4c https://www.encodeproject.org/files/ENCFF000PNJ/@@download/ENCFF000PNJ.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PNK bigWig raw signal ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 70395093 Richard Myers, HAIB 32abd144e7c243d18c805dd4c7a626cc https://www.encodeproject.org/files/ENCFF000PNK/@@download/ENCFF000PNK.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PNM fastq reads ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 538420657 Richard Myers, HAIB 4a9a1d7fab45d725e799cba4cadf14b3 https://www.encodeproject.org/files/ENCFF000PNM/@@download/ENCFF000PNM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POO/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PNT fastq reads ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1490539307 Richard Myers, HAIB 4e09b791702c937e638007ad64bf2785 https://www.encodeproject.org/files/ENCFF000PNT/@@download/ENCFF000PNT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POQ/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UHE bed broadPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 410608 Richard Myers, HAIB 92a3618d434809d3ba6425c87985209c https://www.encodeproject.org/files/ENCFF001UHE/@@download/ENCFF001UHE.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UHF bed broadPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 551312 Richard Myers, HAIB 0817b6d1f2ac0fdb7c331342729f8a41 https://www.encodeproject.org/files/ENCFF001UHF/@@download/ENCFF001UHF.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CKX bed narrowPeak optimal idr thresholded peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 540805 ENCODE Consortium Analysis Working Group ce06a76967ec69ad203d94a245f579bf https://www.encodeproject.org/files/ENCFF002CKX/@@download/ENCFF002CKX.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF536QCV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CKX 1512962 ENCODE Consortium 534d20516cf80ac8dec991ffcbf1b29b https://www.encodeproject.org/files/ENCFF536QCV/@@download/ENCFF536QCV.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF704XJN bam alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PNM, ENCFF643CGH 272164127 ENCODE Processing Pipeline d8c8392ab6b77a2a008954ccca66300a https://www.encodeproject.org/files/ENCFF704XJN/@@download/ENCFF704XJN.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF555CHL bam unfiltered alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PNM, ENCFF643CGH 675473196 ENCODE Processing Pipeline 3ca7508adadd0a9def203caf666d9cd6 https://www.encodeproject.org/files/ENCFF555CHL/@@download/ENCFF555CHL.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF739TSH bam unfiltered alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNT, ENCFF643CGH 1781619886 ENCODE Processing Pipeline 76d0e09d3c1530c531deb107059cfccd https://www.encodeproject.org/files/ENCFF739TSH/@@download/ENCFF739TSH.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF263PSR bam alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNT, ENCFF643CGH 779624046 ENCODE Processing Pipeline 68d513e1ed96206df12c4d7426d0cfbc https://www.encodeproject.org/files/ENCFF263PSR/@@download/ENCFF263PSR.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF988KTE bam alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PNM, ENCFF807MUK 272457289 ENCODE Processing Pipeline 82009fc352965563b1d7683e808e3e48 https://www.encodeproject.org/files/ENCFF988KTE/@@download/ENCFF988KTE.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF747MOU bam unfiltered alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PNM, ENCFF807MUK 674223239 ENCODE Processing Pipeline 852de6b30b62b7bb449a0515a1b98e23 https://www.encodeproject.org/files/ENCFF747MOU/@@download/ENCFF747MOU.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF541JLQ bam alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNT, ENCFF807MUK 780184526 ENCODE Processing Pipeline c83e2c246f862503ee31529b3ce6fe80 https://www.encodeproject.org/files/ENCFF541JLQ/@@download/ENCFF541JLQ.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF420ZWG bam unfiltered alignments ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNT, ENCFF807MUK 1778995448 ENCODE Processing Pipeline e6d5c6097fc56573f6d0b44bd3d232f3 https://www.encodeproject.org/files/ENCFF420ZWG/@@download/ENCFF420ZWG.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF836RED bigWig signal p-value ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF704XJN, ENCFF741TQN 422945130 ENCODE Processing Pipeline 11f8776ad1df44eec70208e45d9d20b5 https://www.encodeproject.org/files/ENCFF836RED/@@download/ENCFF836RED.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF933QQE bigWig signal p-value ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF249PQD, ENCFF263PSR, ENCFF741TQN 488152559 ENCODE Processing Pipeline a54c9541eb4d442668e989bf32abfe88 https://www.encodeproject.org/files/ENCFF933QQE/@@download/ENCFF933QQE.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF276SWJ bigWig signal p-value ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249PQD, ENCFF263PSR, ENCFF704XJN, ENCFF741TQN 496923438 ENCODE Processing Pipeline 5a39379af5f4f7f092f568bb89fdd2ae https://www.encodeproject.org/files/ENCFF276SWJ/@@download/ENCFF276SWJ.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF481ONN bigWig fold change over control ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF704XJN, ENCFF741TQN 213605289 ENCODE Processing Pipeline 35ae4d12e8ad8d873c910c95c565fc46 https://www.encodeproject.org/files/ENCFF481ONN/@@download/ENCFF481ONN.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF364GBS bigWig fold change over control ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF249PQD, ENCFF263PSR, ENCFF741TQN 321039917 ENCODE Processing Pipeline 126d16db09da04b689db821dc9ef33c3 https://www.encodeproject.org/files/ENCFF364GBS/@@download/ENCFF364GBS.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF878OUJ bed narrowPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249PQD, ENCFF263PSR, ENCFF704XJN, ENCFF741TQN 6609303 ENCODE Processing Pipeline 07f0549225bb4be0c330debd97e354b4 https://www.encodeproject.org/files/ENCFF878OUJ/@@download/ENCFF878OUJ.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF378NKG bigWig fold change over control ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249PQD, ENCFF263PSR, ENCFF704XJN, ENCFF741TQN 435851484 ENCODE Processing Pipeline 5d8f3e2c03db7fc28d1c6febd4b8aeb9 https://www.encodeproject.org/files/ENCFF378NKG/@@download/ENCFF378NKG.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF387XMX bed narrowPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF704XJN, ENCFF741TQN 4128875 ENCODE Processing Pipeline 43c8b68fa74a8ac83af2ec476cdc5307 https://www.encodeproject.org/files/ENCFF387XMX/@@download/ENCFF387XMX.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF495JBN bigBed narrowPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF878OUJ 12365049 ENCODE Processing Pipeline cd6dd12b7aef81fd621b85fba6c0cb64 https://www.encodeproject.org/files/ENCFF495JBN/@@download/ENCFF495JBN.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF493GSM bed narrowPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF249PQD, ENCFF263PSR, ENCFF741TQN 6328196 ENCODE Processing Pipeline 66a379decf97b37e3898fee830878d53 https://www.encodeproject.org/files/ENCFF493GSM/@@download/ENCFF493GSM.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF925TDZ bigBed narrowPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF387XMX 8857495 ENCODE Processing Pipeline f9fd9da8953622100162ef2a7c63bd78 https://www.encodeproject.org/files/ENCFF925TDZ/@@download/ENCFF925TDZ.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF497QSA bigBed narrowPeak peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF493GSM 12345799 ENCODE Processing Pipeline f59c71413931dfbaf01bee99a69b9edf https://www.encodeproject.org/files/ENCFF497QSA/@@download/ENCFF497QSA.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF973TES bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF442SGT 1146921 ENCODE Processing Pipeline 1497b49c5d60ea159e21e2e0ebae45cb https://www.encodeproject.org/files/ENCFF973TES/@@download/ENCFF973TES.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF565SUC bed narrowPeak optimal idr thresholded peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF387XMX, ENCFF419RSJ, ENCFF493GSM, ENCFF878OUJ 518246 ENCODE Processing Pipeline 9b8590f267d6d01e9ab2afd1220a7485 https://www.encodeproject.org/files/ENCFF565SUC/@@download/ENCFF565SUC.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF442SGT bed narrowPeak conservative idr thresholded peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF387XMX, ENCFF419RSJ, ENCFF493GSM, ENCFF878OUJ 481754 ENCODE Processing Pipeline 139bb3000f59fc41f0cd1dd928761002 https://www.encodeproject.org/files/ENCFF442SGT/@@download/ENCFF442SGT.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF664JCZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF565SUC 1205431 ENCODE Processing Pipeline 867556ca2e4b2a9711381019b501be26 https://www.encodeproject.org/files/ENCFF664JCZ/@@download/ENCFF664JCZ.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QNT bam alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000QOD 1017283519 Richard Myers, HAIB 47aec9968e095f96cce89b1b285f07e7 https://www.encodeproject.org/files/ENCFF000QNT/@@download/ENCFF000QNT.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000QNU bam alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QOB 1259794622 Richard Myers, HAIB e617a3967821ba833a8cfccbbbb87d0a https://www.encodeproject.org/files/ENCFF000QNU/@@download/ENCFF000QNU.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000QNV bigBed broadPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UNB 160068 Richard Myers, HAIB c1d164b1d798bbf308e7ca0ca14555a1 https://www.encodeproject.org/files/ENCFF000QNV/@@download/ENCFF000QNV.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000QNW bigBed broadPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UNC 181890 Richard Myers, HAIB c6788ba3fedff59deabf1091b3200a4a https://www.encodeproject.org/files/ENCFF000QNW/@@download/ENCFF000QNW.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000QNX bigWig raw signal ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 100897917 Richard Myers, HAIB 051d95fe17be6b72f9c0f4c10b6aa7ba https://www.encodeproject.org/files/ENCFF000QNX/@@download/ENCFF000QNX.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000QNZ bigWig raw signal ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 119437875 Richard Myers, HAIB 048ed0d6187480559ebbdda36e68ced9 https://www.encodeproject.org/files/ENCFF000QNZ/@@download/ENCFF000QNZ.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000QOB fastq reads ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1369345064 Richard Myers, HAIB 94d6fa7b586e11fafa1c29cc413aa08c https://www.encodeproject.org/files/ENCFF000QOB/@@download/ENCFF000QOB.fastq.gz HiSeq 2000 /files/ENCFF000QQI/ released low read depth biological replicates with identical biosample ENCFF000QOD fastq reads ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1040026074 Richard Myers, HAIB 053322f11f2e722c5f49c1db0c0cfe21 https://www.encodeproject.org/files/ENCFF000QOD/@@download/ENCFF000QOD.fastq.gz HiSeq 2000 /files/ENCFF000QQI/ released low read depth biological replicates with identical biosample ENCFF001UNB bed broadPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 73408 Richard Myers, HAIB 37541aa41433da4bca2e91900cb70a36 https://www.encodeproject.org/files/ENCFF001UNB/@@download/ENCFF001UNB.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF001UNC bed broadPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 86606 Richard Myers, HAIB 374bee399a241b2efa604368fc666d5d https://www.encodeproject.org/files/ENCFF001UNC/@@download/ENCFF001UNC.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF494QYM bam unfiltered alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QOD, ENCFF643CGH 1096982014 ENCODE Processing Pipeline 5acb6771375a666e96fc8c8f4c0dc6fe https://www.encodeproject.org/files/ENCFF494QYM/@@download/ENCFF494QYM.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF438EEP bam unfiltered alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QOD, ENCFF807MUK 1093485019 ENCODE Processing Pipeline 7dfd749328dbaf2f02bc3273e48d1368 https://www.encodeproject.org/files/ENCFF438EEP/@@download/ENCFF438EEP.bam hg19 released low read depth biological replicates with identical biosample ENCFF193UAS bam unfiltered alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QOB, ENCFF643CGH 1327970073 ENCODE Processing Pipeline cd79d07a1a00e98546bbf1afd861ce7f https://www.encodeproject.org/files/ENCFF193UAS/@@download/ENCFF193UAS.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF232NIJ bam alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QOD, ENCFF643CGH 811797048 ENCODE Processing Pipeline 110cd90de1447162ac8b54ae186505b6 https://www.encodeproject.org/files/ENCFF232NIJ/@@download/ENCFF232NIJ.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF821VJR bam alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QOB, ENCFF643CGH 702573910 ENCODE Processing Pipeline 01b31563418daf5b1b2ae48d33472a65 https://www.encodeproject.org/files/ENCFF821VJR/@@download/ENCFF821VJR.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF023QOD bam unfiltered alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QOB, ENCFF807MUK 1325707266 ENCODE Processing Pipeline 9d377815ca8d2efd1244e7f6e6c16b54 https://www.encodeproject.org/files/ENCFF023QOD/@@download/ENCFF023QOD.bam hg19 released low read depth biological replicates with identical biosample ENCFF937DHJ bam alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QOD, ENCFF807MUK 812281090 ENCODE Processing Pipeline 7802c58bc159d2dc43adbd0699b45084 https://www.encodeproject.org/files/ENCFF937DHJ/@@download/ENCFF937DHJ.bam hg19 released low read depth biological replicates with identical biosample ENCFF722ZVE bam alignments ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QOB, ENCFF807MUK 703012978 ENCODE Processing Pipeline dbf050ceaf1f92befe3beb1092481ca4 https://www.encodeproject.org/files/ENCFF722ZVE/@@download/ENCFF722ZVE.bam hg19 released low read depth biological replicates with identical biosample ENCFF419VMF bigWig signal p-value ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF232NIJ, ENCFF927WZT 395199679 ENCODE Processing Pipeline f721e1f6393949cbce627dc3b701a029 https://www.encodeproject.org/files/ENCFF419VMF/@@download/ENCFF419VMF.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF293IEK bigWig signal p-value ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF232NIJ, ENCFF821VJR, ENCFF927WZT 467298717 ENCODE Processing Pipeline 225649c1e5936a5cf3a46d2487a6f1c7 https://www.encodeproject.org/files/ENCFF293IEK/@@download/ENCFF293IEK.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF624QFG bed narrowPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF232NIJ, ENCFF927WZT 4862773 ENCODE Processing Pipeline 1915a7a1aadaf84cb68ca8ec5ee56fe8 https://www.encodeproject.org/files/ENCFF624QFG/@@download/ENCFF624QFG.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF918BVV bed narrowPeak conservative idr thresholded peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF106WSZ, ENCFF419RSJ, ENCFF520XQJ, ENCFF624QFG 202760 ENCODE Processing Pipeline c3ae09fefd1a7ab72b5a8cefc74f39db https://www.encodeproject.org/files/ENCFF918BVV/@@download/ENCFF918BVV.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF569ZCY bed narrowPeak optimal idr thresholded peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF106WSZ, ENCFF419RSJ, ENCFF520XQJ, ENCFF624QFG 270016 ENCODE Processing Pipeline 19699282256e49b95da31e2f4948805f https://www.encodeproject.org/files/ENCFF569ZCY/@@download/ENCFF569ZCY.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF984GNQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF569ZCY 495071 ENCODE Processing Pipeline 98c103397f2b7b4a239ddac927e70e5a https://www.encodeproject.org/files/ENCFF984GNQ/@@download/ENCFF984GNQ.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF592VHQ bigWig signal p-value ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF821VJR, ENCFF927WZT 392354090 ENCODE Processing Pipeline 321cf270156dfa9165a970f4bb377589 https://www.encodeproject.org/files/ENCFF592VHQ/@@download/ENCFF592VHQ.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF459CCO bigWig fold change over control ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF232NIJ, ENCFF821VJR, ENCFF927WZT 518325360 ENCODE Processing Pipeline cf1d6b11c0dbd077813814864d0ffb6f https://www.encodeproject.org/files/ENCFF459CCO/@@download/ENCFF459CCO.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF106WSZ bed narrowPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF232NIJ, ENCFF821VJR, ENCFF927WZT 5765946 ENCODE Processing Pipeline 68e7b6cb2f5ee2676e6b688bde02b746 https://www.encodeproject.org/files/ENCFF106WSZ/@@download/ENCFF106WSZ.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF363UHS bigBed narrowPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF520XQJ 12804576 ENCODE Processing Pipeline d85529d4287d76160d87ce9909d9cdfe https://www.encodeproject.org/files/ENCFF363UHS/@@download/ENCFF363UHS.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF492TJT bigBed narrowPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF624QFG 10752180 ENCODE Processing Pipeline c2725ef6f6af017bb5cb2b2569d06196 https://www.encodeproject.org/files/ENCFF492TJT/@@download/ENCFF492TJT.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF212RCM bigWig fold change over control ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF821VJR, ENCFF927WZT 286630303 ENCODE Processing Pipeline aa56c4986681d485ae7c6b857631187b https://www.encodeproject.org/files/ENCFF212RCM/@@download/ENCFF212RCM.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF097DTL bigWig fold change over control ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF232NIJ, ENCFF927WZT 329787463 ENCODE Processing Pipeline 203a30137b40f0d818462f26e69032d0 https://www.encodeproject.org/files/ENCFF097DTL/@@download/ENCFF097DTL.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF520XQJ bed narrowPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF821VJR, ENCFF927WZT 5208807 ENCODE Processing Pipeline c025efcdac93c8c4bb9a99201e012b99 https://www.encodeproject.org/files/ENCFF520XQJ/@@download/ENCFF520XQJ.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF410GJQ bigBed narrowPeak peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF106WSZ 13265692 ENCODE Processing Pipeline 6a9c86158ba1c1642780f08b3f1e41a8 https://www.encodeproject.org/files/ENCFF410GJQ/@@download/ENCFF410GJQ.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF974PIY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BSU ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF918BVV 398909 ENCODE Processing Pipeline f1e9b4c390656336ae4360d5e023afcc https://www.encodeproject.org/files/ENCFF974PIY/@@download/ENCFF974PIY.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF000QJD bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QJR 724187758 Richard Myers, HAIB 74669be6c21ceba21af59d55793521d2 https://www.encodeproject.org/files/ENCFF000QJD/@@download/ENCFF000QJD.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QJE bigBed broadPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULX 674780 Richard Myers, HAIB 6c3b4bc9ae7790f6bb17f0110edee937 https://www.encodeproject.org/files/ENCFF000QJE/@@download/ENCFF000QJE.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QJF bigBed broadPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULY 298311 Richard Myers, HAIB 66b669ebcf3d3cb04b9f2e3fedcf6239 https://www.encodeproject.org/files/ENCFF000QJF/@@download/ENCFF000QJF.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QJG bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QJP 371386073 Richard Myers, HAIB e85ef479abaaf0b72ad2c92585475f28 https://www.encodeproject.org/files/ENCFF000QJG/@@download/ENCFF000QJG.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QJI bigWig raw signal ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 24475555 Richard Myers, HAIB dac77fee84466087af8a45255cc16019 https://www.encodeproject.org/files/ENCFF000QJI/@@download/ENCFF000QJI.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QJJ bigWig raw signal ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 12319574 Richard Myers, HAIB bfef7f8ecf47825895bd756fc282dfaf https://www.encodeproject.org/files/ENCFF000QJJ/@@download/ENCFF000QJJ.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QJP fastq reads ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 369345973 Richard Myers, HAIB 27bdde22561f8f839cb9bdfc64f77735 https://www.encodeproject.org/files/ENCFF000QJP/@@download/ENCFF000QJP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QJR fastq reads ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 685037617 Richard Myers, HAIB 6ccc2c8fa001bf9a6f5aeed3f1e2f4ab https://www.encodeproject.org/files/ENCFF000QJR/@@download/ENCFF000QJR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF001ULX bed broadPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 385227 Richard Myers, HAIB 1bf5eda232c5803038281953c1f5f815 https://www.encodeproject.org/files/ENCFF001ULX/@@download/ENCFF001ULX.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF001ULY bed broadPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 182030 Richard Myers, HAIB 28728a1c6d56dc0f6aed5a1a8a3fd40e https://www.encodeproject.org/files/ENCFF001ULY/@@download/ENCFF001ULY.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF002CMV bed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 364508 ENCODE Consortium Analysis Working Group ed11b14aaf5f989b08e1da0a481d73cf https://www.encodeproject.org/files/ENCFF002CMV/@@download/ENCFF002CMV.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF666MMS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE ENCFF002CMV 717859 ENCODE Consortium 3585b6877e15603117021503258aab50 https://www.encodeproject.org/files/ENCFF666MMS/@@download/ENCFF666MMS.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF070DTB bam unfiltered alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QJP, ENCFF643CGH 442553986 ENCODE Processing Pipeline a92ddfef5b1d8576655fc9dbb711f7c9 https://www.encodeproject.org/files/ENCFF070DTB/@@download/ENCFF070DTB.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF794ABP bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QJP, ENCFF643CGH 156295938 ENCODE Processing Pipeline 2fbab4694606a2a63232600c8c48b061 https://www.encodeproject.org/files/ENCFF794ABP/@@download/ENCFF794ABP.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF523RSS bam unfiltered alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QJR, ENCFF643CGH 851221925 ENCODE Processing Pipeline bfb0152b5840ea90c2e9a014cb51fae4 https://www.encodeproject.org/files/ENCFF523RSS/@@download/ENCFF523RSS.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF587WWS bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QJR, ENCFF643CGH 390081753 ENCODE Processing Pipeline bd69f335271c3f114e0efc2635c48416 https://www.encodeproject.org/files/ENCFF587WWS/@@download/ENCFF587WWS.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF827PYV bam unfiltered alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QJP, ENCFF807MUK 441566854 ENCODE Processing Pipeline cb3e9d8e3846bbe4b059f50f3a74f4a2 https://www.encodeproject.org/files/ENCFF827PYV/@@download/ENCFF827PYV.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF318WJA bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QJP, ENCFF807MUK 156405298 ENCODE Processing Pipeline bd64912922ada53dacb8b96e1fa0c470 https://www.encodeproject.org/files/ENCFF318WJA/@@download/ENCFF318WJA.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF396PZE bam unfiltered alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QJR, ENCFF807MUK 849833942 ENCODE Processing Pipeline fab48bc6b23b6a2055c69ab2fd2ff77d https://www.encodeproject.org/files/ENCFF396PZE/@@download/ENCFF396PZE.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF528NQV bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QJR, ENCFF807MUK 390305962 ENCODE Processing Pipeline bbc71c4b5a16af131fb5d2724205b0a6 https://www.encodeproject.org/files/ENCFF528NQV/@@download/ENCFF528NQV.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF906YUY bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF794ABP 185036989 ENCODE Processing Pipeline 5f75c67df481a47cf2bd9aee1fdd9f78 https://www.encodeproject.org/files/ENCFF906YUY/@@download/ENCFF906YUY.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF210RNN bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587WWS, ENCFF772PJM, ENCFF794ABP 212691572 ENCODE Processing Pipeline dc6a93cd72777988b584a2e20d37647c https://www.encodeproject.org/files/ENCFF210RNN/@@download/ENCFF210RNN.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF234YTJ bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF794ABP 81984391 ENCODE Processing Pipeline 723dcccf1b989a359bcf9cb48ff7e182 https://www.encodeproject.org/files/ENCFF234YTJ/@@download/ENCFF234YTJ.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF447MDX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF409EYL 388533 ENCODE Processing Pipeline fe97e96495cf371e8701409d7a206793 https://www.encodeproject.org/files/ENCFF447MDX/@@download/ENCFF447MDX.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF208OMR bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF587WWS, ENCFF772PJM 206516586 ENCODE Processing Pipeline 3af4a8a1ff9d23f1066fa85aa238f77f https://www.encodeproject.org/files/ENCFF208OMR/@@download/ENCFF208OMR.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF419ANM bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF587WWS, ENCFF772PJM 4055553 ENCODE Processing Pipeline bb48a448fb4f0cd6efb94258dc838c9e https://www.encodeproject.org/files/ENCFF419ANM/@@download/ENCFF419ANM.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF225JGM bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587WWS, ENCFF772PJM, ENCFF794ABP 2618829 ENCODE Processing Pipeline 5bf1a09c6f0de305f7f65098c9df1f4d https://www.encodeproject.org/files/ENCFF225JGM/@@download/ENCFF225JGM.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF375XWR bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587WWS, ENCFF772PJM, ENCFF794ABP 232271019 ENCODE Processing Pipeline 95edbd3a5c311cae8cf4dcf37df1a40c https://www.encodeproject.org/files/ENCFF375XWR/@@download/ENCFF375XWR.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF774AJU bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225JGM 6003593 ENCODE Processing Pipeline 60eea8902b8616a173407ee13ba36cb3 https://www.encodeproject.org/files/ENCFF774AJU/@@download/ENCFF774AJU.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF076UBM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF717KGR 652292 ENCODE Processing Pipeline 07ee5a73cb87af7fc3f97fbf45441e2a https://www.encodeproject.org/files/ENCFF076UBM/@@download/ENCFF076UBM.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF910PEX bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF587WWS, ENCFF772PJM 168312990 ENCODE Processing Pipeline f9c9fc6f7bd966f2b1bbbceb8f740455 https://www.encodeproject.org/files/ENCFF910PEX/@@download/ENCFF910PEX.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF857POG bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF794ABP 1523381 ENCODE Processing Pipeline 44b833e6e54dd885d4d2e1197854c926 https://www.encodeproject.org/files/ENCFF857POG/@@download/ENCFF857POG.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF409EYL bed narrowPeak conservative idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225JGM, ENCFF419ANM, ENCFF419RSJ, ENCFF857POG 227872 ENCODE Processing Pipeline 93784a6db50bee1592770335f530509e https://www.encodeproject.org/files/ENCFF409EYL/@@download/ENCFF409EYL.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF971IKF bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF419ANM 9694081 ENCODE Processing Pipeline 6258b7f873214ac02d22ea62a34f8a0b https://www.encodeproject.org/files/ENCFF971IKF/@@download/ENCFF971IKF.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF613TYX bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF857POG 3192797 ENCODE Processing Pipeline 2f56b5d81cc2f380696ea32dd5bf8295 https://www.encodeproject.org/files/ENCFF613TYX/@@download/ENCFF613TYX.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF717KGR bed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225JGM, ENCFF419ANM, ENCFF419RSJ, ENCFF857POG 344249 ENCODE Processing Pipeline 265cbc2d514f989af73979fec5570bb3 https://www.encodeproject.org/files/ENCFF717KGR/@@download/ENCFF717KGR.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PMW bam alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PNI 584941358 Richard Myers, HAIB a39f05c87bd04bea02f72a99dc090f66 https://www.encodeproject.org/files/ENCFF000PMW/@@download/ENCFF000PMW.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PMX bigBed broadPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UHC 1222667 Richard Myers, HAIB aa82a1b89e0d0780ff285bc4a10823dd https://www.encodeproject.org/files/ENCFF000PMX/@@download/ENCFF000PMX.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PMY bigBed broadPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UHD 1126793 Richard Myers, HAIB 2031772267f0e6bcec2c0fb57091a6d5 https://www.encodeproject.org/files/ENCFF000PMY/@@download/ENCFF000PMY.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PNB bam alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PNL 1663740427 Richard Myers, HAIB f78edd667a7d09e1f0a17d704b0baf2f https://www.encodeproject.org/files/ENCFF000PNB/@@download/ENCFF000PNB.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PNC bigWig raw signal ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 33834139 Richard Myers, HAIB 73f6ad96ff726fff6268fc8793e60d07 https://www.encodeproject.org/files/ENCFF000PNC/@@download/ENCFF000PNC.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PND bigWig raw signal ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 67381380 Richard Myers, HAIB 0fbea12c92d39d40d9c71211933287ca https://www.encodeproject.org/files/ENCFF000PND/@@download/ENCFF000PND.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PNI fastq reads ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 965140256 Richard Myers, HAIB 9f8e21100976bbac2e5c40761ffb97ae https://www.encodeproject.org/files/ENCFF000PNI/@@download/ENCFF000PNI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read length, low read depth biological replicates with identical biosample ENCFF000PNL fastq reads ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1649555183 Richard Myers, HAIB ba1ae09fba7734a29bc5ea2fa8b54c08 https://www.encodeproject.org/files/ENCFF000PNL/@@download/ENCFF000PNL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read length, low read depth biological replicates with identical biosample ENCFF001UHC bed broadPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 579512 Richard Myers, HAIB 929aa6881c7ee64102be46e90ccb38e8 https://www.encodeproject.org/files/ENCFF001UHC/@@download/ENCFF001UHC.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UHD bed broadPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 565612 Richard Myers, HAIB a5a5a7f3dd50336a798802c8faf941b4 https://www.encodeproject.org/files/ENCFF001UHD/@@download/ENCFF001UHD.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CKW bed narrowPeak optimal idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 409235 ENCODE Consortium Analysis Working Group c6dd4a82ab33a51514512734bb367425 https://www.encodeproject.org/files/ENCFF002CKW/@@download/ENCFF002CKW.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF019HYQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE ENCFF002CKW 1012661 ENCODE Consortium 9fb95eef1701381835bd632d0fd61026 https://www.encodeproject.org/files/ENCFF019HYQ/@@download/ENCFF019HYQ.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF591PPT bam alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PNI, ENCFF643CGH 697360733 ENCODE Processing Pipeline e2ffd63f46e78e0eb6c0bd0a5b568a35 https://www.encodeproject.org/files/ENCFF591PPT/@@download/ENCFF591PPT.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF254BKS bam unfiltered alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PNI, ENCFF643CGH 1185277091 ENCODE Processing Pipeline 1621ee640e8222adbbc85b50f8ede2b2 https://www.encodeproject.org/files/ENCFF254BKS/@@download/ENCFF254BKS.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF122YTI bam unfiltered alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PNL, ENCFF643CGH 1822380687 ENCODE Processing Pipeline 382c0786206f53375673685dc99c4cda https://www.encodeproject.org/files/ENCFF122YTI/@@download/ENCFF122YTI.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF684WXH bam alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PNL, ENCFF643CGH 1195087170 ENCODE Processing Pipeline bf5b75d7b73c57e78d757ebc365cf4cd https://www.encodeproject.org/files/ENCFF684WXH/@@download/ENCFF684WXH.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF388ZCI bam unfiltered alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PNI, ENCFF807MUK 1183547475 ENCODE Processing Pipeline 97a39b7f0c23b5ad780b771c0e7eae85 https://www.encodeproject.org/files/ENCFF388ZCI/@@download/ENCFF388ZCI.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF362YKT bam alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PNI, ENCFF807MUK 697739276 ENCODE Processing Pipeline cd21f8ac416b1697a1c41339b6efbcd9 https://www.encodeproject.org/files/ENCFF362YKT/@@download/ENCFF362YKT.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF946PIG bam unfiltered alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PNL, ENCFF807MUK 1818184464 ENCODE Processing Pipeline 3d105d5a99ff13eb7d588d3c7a1f451e https://www.encodeproject.org/files/ENCFF946PIG/@@download/ENCFF946PIG.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF090TEI bam alignments ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PNL, ENCFF807MUK 1195817983 ENCODE Processing Pipeline 3b4939e848e1b44ae7f5b0dfce5689e3 https://www.encodeproject.org/files/ENCFF090TEI/@@download/ENCFF090TEI.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF583HVS bigWig signal p-value ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF285LVE, ENCFF591PPT 419803385 ENCODE Processing Pipeline 6d9f4c8f9e22d1962905376ffbe89c26 https://www.encodeproject.org/files/ENCFF583HVS/@@download/ENCFF583HVS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF537WYP bigWig signal p-value ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF285LVE, ENCFF684WXH 545556977 ENCODE Processing Pipeline b8688c5aec4c5a04fcfeca3980a88b98 https://www.encodeproject.org/files/ENCFF537WYP/@@download/ENCFF537WYP.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF713PYM bigWig signal p-value ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF285LVE, ENCFF591PPT, ENCFF684WXH 539298266 ENCODE Processing Pipeline 0e340ea04ed571af29184c5d26eca58a https://www.encodeproject.org/files/ENCFF713PYM/@@download/ENCFF713PYM.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF286SQT bigWig fold change over control ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF285LVE, ENCFF591PPT 292488311 ENCODE Processing Pipeline 55cf049befa96bc9c8020b83a78770d0 https://www.encodeproject.org/files/ENCFF286SQT/@@download/ENCFF286SQT.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF757ZHO bigWig fold change over control ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF285LVE, ENCFF684WXH 497214929 ENCODE Processing Pipeline adaf70dca5b340c9f25751e8d6bc7c9a https://www.encodeproject.org/files/ENCFF757ZHO/@@download/ENCFF757ZHO.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF206RHP bigWig fold change over control ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF285LVE, ENCFF591PPT, ENCFF684WXH 660356793 ENCODE Processing Pipeline 88f5827a2354236a1c4db516f39d5142 https://www.encodeproject.org/files/ENCFF206RHP/@@download/ENCFF206RHP.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF564XKE bed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF285LVE, ENCFF684WXH 6925826 ENCODE Processing Pipeline 1d915c2a1de58ceddb0067f3611811ea https://www.encodeproject.org/files/ENCFF564XKE/@@download/ENCFF564XKE.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF256WQQ bed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF285LVE, ENCFF591PPT 6283965 ENCODE Processing Pipeline 5b7b77abff470add846d0506e082d6fa https://www.encodeproject.org/files/ENCFF256WQQ/@@download/ENCFF256WQQ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF143GQW bed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF285LVE, ENCFF591PPT, ENCFF684WXH 7016329 ENCODE Processing Pipeline bc40cfe8afdc8b1fe70cbb3287199d07 https://www.encodeproject.org/files/ENCFF143GQW/@@download/ENCFF143GQW.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF517QYO bigBed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF564XKE 11994182 ENCODE Processing Pipeline e27ba2244b39218c6ca8ed7c94edfcb7 https://www.encodeproject.org/files/ENCFF517QYO/@@download/ENCFF517QYO.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF258KMR bigBed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF256WQQ 12027271 ENCODE Processing Pipeline 2fadbbb152f1c2f7b785b1b1a5a75908 https://www.encodeproject.org/files/ENCFF258KMR/@@download/ENCFF258KMR.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF214TVS bed narrowPeak conservative idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF143GQW, ENCFF256WQQ, ENCFF419RSJ, ENCFF564XKE 492263 ENCODE Processing Pipeline 699d5880f2907531b6167ee53e009b5d https://www.encodeproject.org/files/ENCFF214TVS/@@download/ENCFF214TVS.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF560WKN bigBed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF143GQW 11939780 ENCODE Processing Pipeline f1542db201c500477dafaa6177ed28b6 https://www.encodeproject.org/files/ENCFF560WKN/@@download/ENCFF560WKN.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF137ZTF bed narrowPeak optimal idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF143GQW, ENCFF256WQQ, ENCFF419RSJ, ENCFF564XKE 506973 ENCODE Processing Pipeline 3fa17c8e5fc33900dab085e36ac7b333 https://www.encodeproject.org/files/ENCFF137ZTF/@@download/ENCFF137ZTF.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF384UWA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF137ZTF 1166223 ENCODE Processing Pipeline f29cfb0142d877e839e571dc5f88b188 https://www.encodeproject.org/files/ENCFF384UWA/@@download/ENCFF384UWA.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF162YMO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF214TVS 1139358 ENCODE Processing Pipeline a9125a149ce92bf0193c4a30829d08d8 https://www.encodeproject.org/files/ENCFF162YMO/@@download/ENCFF162YMO.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF345ZRA bigWig signal p-value ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF090TEI, ENCFF346RZT, ENCFF362YKT 542562143 ENCODE Processing Pipeline ffe582364610970f58a91b99381e34ab https://www.encodeproject.org/files/ENCFF345ZRA/@@download/ENCFF345ZRA.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF846ZDQ bigWig fold change over control ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF346RZT, ENCFF362YKT 294440150 ENCODE Processing Pipeline 98b0c3cb1263bdfd515fac7feadad589 https://www.encodeproject.org/files/ENCFF846ZDQ/@@download/ENCFF846ZDQ.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF198UGH bed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF346RZT, ENCFF362YKT 6197544 ENCODE Processing Pipeline 59087602ebdd393540fcfe52ba68d390 https://www.encodeproject.org/files/ENCFF198UGH/@@download/ENCFF198UGH.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF061EOS bed narrowPeak optimal idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF198UGH, ENCFF261HIN, ENCFF764SZC 502534 ENCODE Processing Pipeline 27a1ee77f9d3729b9065eb836173ef26 https://www.encodeproject.org/files/ENCFF061EOS/@@download/ENCFF061EOS.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF487TQT bigWig signal p-value ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF090TEI, ENCFF346RZT 545144401 ENCODE Processing Pipeline d596abad05c18ceb421118325b6e682b https://www.encodeproject.org/files/ENCFF487TQT/@@download/ENCFF487TQT.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF071KXB bigWig fold change over control ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF090TEI, ENCFF346RZT 504484897 ENCODE Processing Pipeline 60956f37acc8b995583365360abcb801 https://www.encodeproject.org/files/ENCFF071KXB/@@download/ENCFF071KXB.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF468JHA bigWig fold change over control ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF090TEI, ENCFF346RZT, ENCFF362YKT 666740794 ENCODE Processing Pipeline d76eed37558cdfe83ba5937ee49ee3e2 https://www.encodeproject.org/files/ENCFF468JHA/@@download/ENCFF468JHA.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF956UXY bigBed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF261HIN 11973851 ENCODE Processing Pipeline 0f11432cb072f2751a92c877dc98c326 https://www.encodeproject.org/files/ENCFF956UXY/@@download/ENCFF956UXY.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF883NGP bigBed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF764SZC 11925884 ENCODE Processing Pipeline 956d2286b9ec903a5e1fbbbd7c902aea https://www.encodeproject.org/files/ENCFF883NGP/@@download/ENCFF883NGP.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF979IOQ bed narrowPeak conservative idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF198UGH, ENCFF261HIN, ENCFF764SZC 491580 ENCODE Processing Pipeline b09fb9055adafaf7d96008d45bb78a37 https://www.encodeproject.org/files/ENCFF979IOQ/@@download/ENCFF979IOQ.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF659ASH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF979IOQ 1137102 ENCODE Processing Pipeline ef291f27dcac32edcafdc86ebec7610b https://www.encodeproject.org/files/ENCFF659ASH/@@download/ENCFF659ASH.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF777PTX bigWig signal p-value ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF346RZT, ENCFF362YKT 433425648 ENCODE Processing Pipeline 1d48293094f75b0130e43fd76e8389bd https://www.encodeproject.org/files/ENCFF777PTX/@@download/ENCFF777PTX.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF764SZC bed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF090TEI, ENCFF346RZT, ENCFF362YKT 7007473 ENCODE Processing Pipeline ed042efeb5e71d9e2f310ec612f4cdd1 https://www.encodeproject.org/files/ENCFF764SZC/@@download/ENCFF764SZC.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF785YXA bigBed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF198UGH 11915204 ENCODE Processing Pipeline 629806c5409144898c0a458714201b8e https://www.encodeproject.org/files/ENCFF785YXA/@@download/ENCFF785YXA.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF297MSY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF061EOS 1157055 ENCODE Processing Pipeline 95892026e7ee3336d6ebe081090de28f https://www.encodeproject.org/files/ENCFF297MSY/@@download/ENCFF297MSY.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF261HIN bed narrowPeak peaks ENCSR000BPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF090TEI, ENCFF346RZT 6908599 ENCODE Processing Pipeline a8297f85febf96ca4b0c377d90d16167 https://www.encodeproject.org/files/ENCFF261HIN/@@download/ENCFF261HIN.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF000OKH bam alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OKU 375877874 Richard Myers, HAIB 07d38c8207bccf1b33173cea12df2777 https://www.encodeproject.org/files/ENCFF000OKH/@@download/ENCFF000OKH.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000OKI bigBed broadPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAI 156027 Richard Myers, HAIB 6f684606371b60570b9a59ce7b4b68aa https://www.encodeproject.org/files/ENCFF000OKI/@@download/ENCFF000OKI.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000OKJ bigBed broadPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAJ 505962 Richard Myers, HAIB feae00d514a52860120626425ef46d03 https://www.encodeproject.org/files/ENCFF000OKJ/@@download/ENCFF000OKJ.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000OKK bam alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OKT 390808238 Richard Myers, HAIB 71d402dc09a40e452b7dc7a2446270ed https://www.encodeproject.org/files/ENCFF000OKK/@@download/ENCFF000OKK.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000OKN bigWig raw signal ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 18430145 Richard Myers, HAIB c70d4e6872d1eee60a727649ba7cd7d6 https://www.encodeproject.org/files/ENCFF000OKN/@@download/ENCFF000OKN.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000OKO bigWig raw signal ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 11142223 Richard Myers, HAIB f0efbc7c544c2de71871edbee19225a3 https://www.encodeproject.org/files/ENCFF000OKO/@@download/ENCFF000OKO.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000OKT fastq reads ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 635764938 Richard Myers, HAIB cb2bd304d0bfa13703d345c6c95b6173 https://www.encodeproject.org/files/ENCFF000OKT/@@download/ENCFF000OKT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLS/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000OKU fastq reads ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 736684446 Richard Myers, HAIB f2f7c845afc341cced22237855b1275e https://www.encodeproject.org/files/ENCFF000OKU/@@download/ENCFF000OKU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLS/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF001UAI bed broadPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 56588 Richard Myers, HAIB 32c7e407c3dfc66dc12dee96c6f1b83e https://www.encodeproject.org/files/ENCFF001UAI/@@download/ENCFF001UAI.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF001UAJ bed broadPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 288863 Richard Myers, HAIB 2970f1e6853ab3c33c83edf1e2d3173d https://www.encodeproject.org/files/ENCFF001UAJ/@@download/ENCFF001UAJ.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF002CIM bed narrowPeak optimal idr thresholded peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 199278 ENCODE Consortium Analysis Working Group a3820a96200dbeae55a3318d37d69bd0 https://www.encodeproject.org/files/ENCFF002CIM/@@download/ENCFF002CIM.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF549WLL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE ENCFF002CIM 418297 ENCODE Consortium bbe5d1de03dce094277129f45edc7bf4 https://www.encodeproject.org/files/ENCFF549WLL/@@download/ENCFF549WLL.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF945KFJ bam unfiltered alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKT, ENCFF643CGH 768928790 ENCODE Processing Pipeline a3aff4aadd4a59593e3e69a8f6195d26 https://www.encodeproject.org/files/ENCFF945KFJ/@@download/ENCFF945KFJ.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF968WVT bam alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKT, ENCFF643CGH 334571120 ENCODE Processing Pipeline 45a7e565b5a0f318965576520a94b341 https://www.encodeproject.org/files/ENCFF968WVT/@@download/ENCFF968WVT.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF508IXY bam unfiltered alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKU, ENCFF643CGH 820357174 ENCODE Processing Pipeline 65f3a6f6b87532af2cfe98f8de876c03 https://www.encodeproject.org/files/ENCFF508IXY/@@download/ENCFF508IXY.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF853EOZ bam alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKU, ENCFF643CGH 177530147 ENCODE Processing Pipeline 5d299907e0f98e4b669ac7f3fb72a8be https://www.encodeproject.org/files/ENCFF853EOZ/@@download/ENCFF853EOZ.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF597RTF bam unfiltered alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKT, ENCFF807MUK 769490362 ENCODE Processing Pipeline 103a425f95246d153fb5060de071d4d9 https://www.encodeproject.org/files/ENCFF597RTF/@@download/ENCFF597RTF.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF996BLA bam alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKT, ENCFF807MUK 331054147 ENCODE Processing Pipeline 3e0127182efabeff725c6aad0f74cd7e https://www.encodeproject.org/files/ENCFF996BLA/@@download/ENCFF996BLA.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF449WJL bam unfiltered alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKU, ENCFF807MUK 825583829 ENCODE Processing Pipeline 6fd415e4cfbf73614c3e24b3d9a25297 https://www.encodeproject.org/files/ENCFF449WJL/@@download/ENCFF449WJL.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF436ING bam alignments ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKU, ENCFF807MUK 173307292 ENCODE Processing Pipeline 7ad4dc7080204cbec18d41e3cb2c84b5 https://www.encodeproject.org/files/ENCFF436ING/@@download/ENCFF436ING.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF598OWC bigWig signal p-value ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF827ILE, ENCFF853EOZ 420380472 ENCODE Processing Pipeline 7c9b1b982b3f4873639354ebeb45112c https://www.encodeproject.org/files/ENCFF598OWC/@@download/ENCFF598OWC.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF554HFV bigWig signal p-value ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF827ILE, ENCFF968WVT 505842146 ENCODE Processing Pipeline 701d361d0b33bdc7c9a9b3bbfef80cac https://www.encodeproject.org/files/ENCFF554HFV/@@download/ENCFF554HFV.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF528MUQ bigWig signal p-value ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF827ILE, ENCFF853EOZ, ENCFF968WVT 458808935 ENCODE Processing Pipeline 7a831a876c6ca49b476a05283ec58856 https://www.encodeproject.org/files/ENCFF528MUQ/@@download/ENCFF528MUQ.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF600QUB bigWig fold change over control ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF827ILE, ENCFF853EOZ 134738630 ENCODE Processing Pipeline 34bab93d3ac950cd7acb3c4f50b37299 https://www.encodeproject.org/files/ENCFF600QUB/@@download/ENCFF600QUB.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF483YRQ bigWig fold change over control ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF827ILE, ENCFF968WVT 216661492 ENCODE Processing Pipeline 13af090f6aaf1a2c1b978cc59dcb5e7f https://www.encodeproject.org/files/ENCFF483YRQ/@@download/ENCFF483YRQ.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF959MZS bigWig fold change over control ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF827ILE, ENCFF853EOZ, ENCFF968WVT 324555081 ENCODE Processing Pipeline 9619886d44c4110fbc28bde5660bc60e https://www.encodeproject.org/files/ENCFF959MZS/@@download/ENCFF959MZS.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF454RFY bed narrowPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF827ILE, ENCFF968WVT 3588217 ENCODE Processing Pipeline f461182bffdfa921bd746469824aed80 https://www.encodeproject.org/files/ENCFF454RFY/@@download/ENCFF454RFY.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF182KEP bed narrowPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF827ILE, ENCFF853EOZ, ENCFF968WVT 4816141 ENCODE Processing Pipeline c4d1aab6dc1103d3e2442d16646c5f03 https://www.encodeproject.org/files/ENCFF182KEP/@@download/ENCFF182KEP.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF687OWF bed narrowPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF827ILE, ENCFF853EOZ 2131766 ENCODE Processing Pipeline 25c51ea3920abc014aaa4b8de272e865 https://www.encodeproject.org/files/ENCFF687OWF/@@download/ENCFF687OWF.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF935PHV bigBed narrowPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF687OWF 4693776 ENCODE Processing Pipeline 9a9b802b35e9cd29d05c0039b85e53b1 https://www.encodeproject.org/files/ENCFF935PHV/@@download/ENCFF935PHV.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF823ONV bigBed narrowPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF182KEP 10777183 ENCODE Processing Pipeline fc42c750af3a0dfa4f4b97818553c2b5 https://www.encodeproject.org/files/ENCFF823ONV/@@download/ENCFF823ONV.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF363SED bigBed narrowPeak peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF454RFY 7997298 ENCODE Processing Pipeline f0206a92367c95148505006a67c904e8 https://www.encodeproject.org/files/ENCFF363SED/@@download/ENCFF363SED.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF300QIO bed narrowPeak conservative idr thresholded peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF182KEP, ENCFF419RSJ, ENCFF454RFY, ENCFF687OWF 82409 ENCODE Processing Pipeline 38f8a66dce5cdb4ca0e63481d14b54c5 https://www.encodeproject.org/files/ENCFF300QIO/@@download/ENCFF300QIO.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF009EFA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF300QIO 191817 ENCODE Processing Pipeline 864ad5aa6b8b288a747d29fef30ec522 https://www.encodeproject.org/files/ENCFF009EFA/@@download/ENCFF009EFA.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF466ZRQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF997VAB 450700 ENCODE Processing Pipeline cba72c00cbc9e94e0a78cfa0e01a7910 https://www.encodeproject.org/files/ENCFF466ZRQ/@@download/ENCFF466ZRQ.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF997VAB bed narrowPeak optimal idr thresholded peaks ENCSR000BJI ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF182KEP, ENCFF419RSJ, ENCFF454RFY, ENCFF687OWF 224871 ENCODE Processing Pipeline 973bcc8488a852cf83a8ac087e5177c4 https://www.encodeproject.org/files/ENCFF997VAB/@@download/ENCFF997VAB.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000OHW bam alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OIJ 376549986 Richard Myers, HAIB 759fef1440389064def536b84f508729 https://www.encodeproject.org/files/ENCFF000OHW/@@download/ENCFF000OHW.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000OHY bigBed broadPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZU 231358 Richard Myers, HAIB f82d4679a6fc54353404e422d7b7c35d https://www.encodeproject.org/files/ENCFF000OHY/@@download/ENCFF000OHY.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000OHZ bigBed broadPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZV 108427 Richard Myers, HAIB e24159735a0275a84b2aaf880c85e892 https://www.encodeproject.org/files/ENCFF000OHZ/@@download/ENCFF000OHZ.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000OIA bam alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OIM 202560196 Richard Myers, HAIB c76179abfecb80b6c33631547908224e https://www.encodeproject.org/files/ENCFF000OIA/@@download/ENCFF000OIA.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000OIC bigWig raw signal ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 7356591 Richard Myers, HAIB c88df834835b15bd59115fb90f06055f https://www.encodeproject.org/files/ENCFF000OIC/@@download/ENCFF000OIC.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000OID bigWig raw signal ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 13020406 Richard Myers, HAIB 5bb17715242f80435cb2a5d5c4d27439 https://www.encodeproject.org/files/ENCFF000OID/@@download/ENCFF000OID.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000OIJ fastq reads ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 724352268 Richard Myers, HAIB 7eac1c7c9acf7138d0d4b0cb38d662ce https://www.encodeproject.org/files/ENCFF000OIJ/@@download/ENCFF000OIJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJZ/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000OIM fastq reads ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 990958272 Richard Myers, HAIB 62d0d51a3e538b63379a1f67f0515ed3 https://www.encodeproject.org/files/ENCFF000OIM/@@download/ENCFF000OIM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJZ/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF001TZU bed broadPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 119693 Richard Myers, HAIB c031c4d29def2fbedca8735420e7339e https://www.encodeproject.org/files/ENCFF001TZU/@@download/ENCFF001TZU.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF001TZV bed broadPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 41490 Richard Myers, HAIB ce037658b50559f1f502754074346fb0 https://www.encodeproject.org/files/ENCFF001TZV/@@download/ENCFF001TZV.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF002CIF bed narrowPeak optimal idr thresholded peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 63039 ENCODE Consortium Analysis Working Group 81219a9230097e295755a9b648cb2a5e https://www.encodeproject.org/files/ENCFF002CIF/@@download/ENCFF002CIF.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF113QAX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE ENCFF002CIF 171094 ENCODE Consortium 2f9d243c0fe0ae2c3124495f86fd90e3 https://www.encodeproject.org/files/ENCFF113QAX/@@download/ENCFF113QAX.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF278ZMY bam unfiltered alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIJ, ENCFF643CGH 849108375 ENCODE Processing Pipeline 3e6279fe0b2a184b1225bb4484d456c1 https://www.encodeproject.org/files/ENCFF278ZMY/@@download/ENCFF278ZMY.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF771COC bam alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIJ, ENCFF643CGH 251330489 ENCODE Processing Pipeline d33026d7e2e43e62888470abf09ef743 https://www.encodeproject.org/files/ENCFF771COC/@@download/ENCFF771COC.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF863RJF bam alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIM, ENCFF643CGH 266438889 ENCODE Processing Pipeline e1b44ea59fc9f678375574ec44237cc3 https://www.encodeproject.org/files/ENCFF863RJF/@@download/ENCFF863RJF.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF623NTF bam unfiltered alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIM, ENCFF643CGH 1133724378 ENCODE Processing Pipeline b95d3d470803835f9f5af258e7d857d4 https://www.encodeproject.org/files/ENCFF623NTF/@@download/ENCFF623NTF.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF718PPU bam unfiltered alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIJ, ENCFF807MUK 858572980 ENCODE Processing Pipeline 80ebfc7e530b962fc19315d3e741e39e https://www.encodeproject.org/files/ENCFF718PPU/@@download/ENCFF718PPU.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF755PSY bam alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIJ, ENCFF807MUK 245544973 ENCODE Processing Pipeline b106ab2e8bdf12e0510b26dd7b924932 https://www.encodeproject.org/files/ENCFF755PSY/@@download/ENCFF755PSY.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF559NII bam unfiltered alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIM, ENCFF807MUK 1132892631 ENCODE Processing Pipeline 693c90813393bbfb29756a2c35499b01 https://www.encodeproject.org/files/ENCFF559NII/@@download/ENCFF559NII.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF903NFJ bam alignments ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIM, ENCFF807MUK 263189702 ENCODE Processing Pipeline 99cb46c258c8b7cc47c82cab6f82fd73 https://www.encodeproject.org/files/ENCFF903NFJ/@@download/ENCFF903NFJ.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF043UUT bigWig signal p-value ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562XPJ, ENCFF771COC 340183163 ENCODE Processing Pipeline f18d36dc2f18e97180fd850f2df4dfa1 https://www.encodeproject.org/files/ENCFF043UUT/@@download/ENCFF043UUT.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF788TXW bigWig signal p-value ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562XPJ, ENCFF863RJF 311278411 ENCODE Processing Pipeline 42e37f96af0ae816d11772077b73127f https://www.encodeproject.org/files/ENCFF788TXW/@@download/ENCFF788TXW.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF011VAM bigWig signal p-value ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF562XPJ, ENCFF771COC, ENCFF863RJF 376237746 ENCODE Processing Pipeline 2ee22a691101526fcc297bd5676d8255 https://www.encodeproject.org/files/ENCFF011VAM/@@download/ENCFF011VAM.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF008DYO bigWig fold change over control ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562XPJ, ENCFF771COC 149044045 ENCODE Processing Pipeline 6eca77c0d26ca2be6596219e7bae62ee https://www.encodeproject.org/files/ENCFF008DYO/@@download/ENCFF008DYO.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF203IGS bigWig fold change over control ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562XPJ, ENCFF863RJF 152657648 ENCODE Processing Pipeline 6d69d63115ac1b8b671eb799d57afe98 https://www.encodeproject.org/files/ENCFF203IGS/@@download/ENCFF203IGS.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF723BZQ bigWig fold change over control ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF562XPJ, ENCFF771COC, ENCFF863RJF 273484959 ENCODE Processing Pipeline 950dbece8cf030a6da0691583a6bd3bc https://www.encodeproject.org/files/ENCFF723BZQ/@@download/ENCFF723BZQ.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF532GVA bigBed narrowPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF859TST 6034921 ENCODE Processing Pipeline 0dc9a2b4ea913d0cdb1996e6b7e866b8 https://www.encodeproject.org/files/ENCFF532GVA/@@download/ENCFF532GVA.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF127HCN bed narrowPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562XPJ, ENCFF771COC 2916800 ENCODE Processing Pipeline d7e2b2c75ed5051110949512dfc79e38 https://www.encodeproject.org/files/ENCFF127HCN/@@download/ENCFF127HCN.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF401UGK bed narrowPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF562XPJ, ENCFF771COC, ENCFF863RJF 4244782 ENCODE Processing Pipeline 8cc071c425c9902236a11d210573759b https://www.encodeproject.org/files/ENCFF401UGK/@@download/ENCFF401UGK.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF859TST bed narrowPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562XPJ, ENCFF863RJF 2868227 ENCODE Processing Pipeline 0916a87821e2021e0bd5f9ed7bfb1b76 https://www.encodeproject.org/files/ENCFF859TST/@@download/ENCFF859TST.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF411VBQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF315MWD 223995 ENCODE Processing Pipeline 0bfd9a75408c5774136ec01c1270a48d https://www.encodeproject.org/files/ENCFF411VBQ/@@download/ENCFF411VBQ.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF290AFK bigBed narrowPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF127HCN 6133979 ENCODE Processing Pipeline 0e7cbe53f9e58b3fee707b74d8022c8b https://www.encodeproject.org/files/ENCFF290AFK/@@download/ENCFF290AFK.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF571XZE bigBed narrowPeak peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF401UGK 10233259 ENCODE Processing Pipeline 54aecd5d81d93c0b5debc540cfee0de0 https://www.encodeproject.org/files/ENCFF571XZE/@@download/ENCFF571XZE.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF987CQF bed narrowPeak optimal idr thresholded peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF127HCN, ENCFF401UGK, ENCFF419RSJ, ENCFF859TST 114158 ENCODE Processing Pipeline 8cb1d9dbc3ce6691f49ecb9bb2e404fb https://www.encodeproject.org/files/ENCFF987CQF/@@download/ENCFF987CQF.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF162KVF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF987CQF 240560 ENCODE Processing Pipeline 8062cbdde1f82afbb693675efb89f77c https://www.encodeproject.org/files/ENCFF162KVF/@@download/ENCFF162KVF.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF315MWD bed narrowPeak conservative idr thresholded peaks ENCSR000BJH ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF127HCN, ENCFF401UGK, ENCFF419RSJ, ENCFF859TST 102064 ENCODE Processing Pipeline 1f5f74b25b996d9e23d2b178a7a30038 https://www.encodeproject.org/files/ENCFF315MWD/@@download/ENCFF315MWD.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF751TBY fastq reads ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 1 50 single-ended 1492374312 Richard Myers, HAIB c0243345bd6581503e4abe3b4e35b7bd SRA:SRR5338618 https://www.encodeproject.org/files/ENCFF751TBY/@@download/ENCFF751TBY.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF245KJA fastq reads ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 1 50 single-ended 1047637071 Richard Myers, HAIB 652f9b249f102ef29573414a5be8156a SRA:SRR5338617 https://www.encodeproject.org/files/ENCFF245KJA/@@download/ENCFF245KJA.fastq.gz HiSeq 2000 /files/ENCFF958NMQ/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF489HCA bam alignments ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 50 ENCFF751TBY, ENCFF807MUK 1245539137 ENCODE Processing Pipeline 18ab31092296c2b2ec8ba884b7116d14 https://www.encodeproject.org/files/ENCFF489HCA/@@download/ENCFF489HCA.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF442DMR bam alignments ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 50 ENCFF245KJA, ENCFF807MUK 885498797 ENCODE Processing Pipeline c614d1bda4c1c4af7eb8c0dcd9f83e76 https://www.encodeproject.org/files/ENCFF442DMR/@@download/ENCFF442DMR.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF275BYJ bigWig signal p-value ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 ENCFF489HCA, ENCFF654EHF, ENCFF991UTU 988094965 ENCODE Processing Pipeline 99c5f2495cc089d2a376506ada077a22 https://www.encodeproject.org/files/ENCFF275BYJ/@@download/ENCFF275BYJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF251LMC bigWig signal p-value ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 ENCFF442DMR, ENCFF654EHF, ENCFF991UTU 977561431 ENCODE Processing Pipeline 6fe4ea0071c3c59ceb038cdd6ffe1f5f https://www.encodeproject.org/files/ENCFF251LMC/@@download/ENCFF251LMC.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF820AKL bigWig signal p-value ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF442DMR, ENCFF489HCA, ENCFF654EHF, ENCFF991UTU 1193819032 ENCODE Processing Pipeline b018e6ab8fb6b2eb0e256cf3506ec629 https://www.encodeproject.org/files/ENCFF820AKL/@@download/ENCFF820AKL.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF237FUW bigWig fold change over control ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 ENCFF442DMR, ENCFF654EHF, ENCFF991UTU 689103254 ENCODE Processing Pipeline 8c812c7ecbaec3aa3efceeeb12984009 https://www.encodeproject.org/files/ENCFF237FUW/@@download/ENCFF237FUW.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF233DEM bigWig fold change over control ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 ENCFF489HCA, ENCFF654EHF, ENCFF991UTU 985007420 ENCODE Processing Pipeline 2395bd88dc8683e13605fa79a76d0a07 https://www.encodeproject.org/files/ENCFF233DEM/@@download/ENCFF233DEM.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF567WBH bigBed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 ENCFF774TWW 13544601 ENCODE Processing Pipeline 0b0c3fd15ab89177048d2c682a9b3cb6 https://www.encodeproject.org/files/ENCFF567WBH/@@download/ENCFF567WBH.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF753GAP bigWig fold change over control ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF442DMR, ENCFF489HCA, ENCFF654EHF, ENCFF991UTU 1259120904 ENCODE Processing Pipeline 8f1d5820927cd7b20e6ab7b2319fca6b https://www.encodeproject.org/files/ENCFF753GAP/@@download/ENCFF753GAP.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF774TWW bed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 ENCFF442DMR, ENCFF654EHF, ENCFF991UTU 5616210 ENCODE Processing Pipeline 3a18fc63bbba4a86b9d10a4bcf1c6310 https://www.encodeproject.org/files/ENCFF774TWW/@@download/ENCFF774TWW.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF862YTD bed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 ENCFF489HCA, ENCFF654EHF, ENCFF991UTU 6509263 ENCODE Processing Pipeline d487a642ab6faabf4426c5f42cb492b3 https://www.encodeproject.org/files/ENCFF862YTD/@@download/ENCFF862YTD.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF868FGE bed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF442DMR, ENCFF489HCA, ENCFF654EHF, ENCFF991UTU 6905316 ENCODE Processing Pipeline 5d6751c91745913086796c79460319c8 https://www.encodeproject.org/files/ENCFF868FGE/@@download/ENCFF868FGE.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF143WEV bigBed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 ENCFF862YTD 13540069 ENCODE Processing Pipeline c851f4957a93898ba8aeff1a1c874d74 https://www.encodeproject.org/files/ENCFF143WEV/@@download/ENCFF143WEV.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF529CKV bigBed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF868FGE 13555806 ENCODE Processing Pipeline 7f453e18ac9113b1aae1103a8013fc4c https://www.encodeproject.org/files/ENCFF529CKV/@@download/ENCFF529CKV.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF290DDY bam unfiltered alignments ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 50 ENCFF245KJA, ENCFF643CGH 1190305865 ENCODE Processing Pipeline 3b238805d214906cac72303021cc4250 https://www.encodeproject.org/files/ENCFF290DDY/@@download/ENCFF290DDY.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF280NHI bam unfiltered alignments ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 50 ENCFF643CGH, ENCFF751TBY 1677234600 ENCODE Processing Pipeline b38666d99d31f7c7ad498a6c3f9186d1 https://www.encodeproject.org/files/ENCFF280NHI/@@download/ENCFF280NHI.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF993WWR bam alignments ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 50 ENCFF245KJA, ENCFF643CGH 885450985 ENCODE Processing Pipeline 122d8073c8501a4acc2dd871e813f2d9 https://www.encodeproject.org/files/ENCFF993WWR/@@download/ENCFF993WWR.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF209PBB bam alignments ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 50 ENCFF643CGH, ENCFF751TBY 1245718059 ENCODE Processing Pipeline 7445c4821731003a5e38cc2f9ddc9f3c https://www.encodeproject.org/files/ENCFF209PBB/@@download/ENCFF209PBB.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF429SWG bigWig signal p-value ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 ENCFF370PSF, ENCFF993WWR, ENCFF995OIG 977336686 ENCODE Processing Pipeline b3d957c3e188c5afe5b5d222a10e26a6 https://www.encodeproject.org/files/ENCFF429SWG/@@download/ENCFF429SWG.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF025JYV bigWig signal p-value ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 ENCFF209PBB, ENCFF370PSF, ENCFF995OIG 1026208493 ENCODE Processing Pipeline 079736be27b8adf6063eff67858fa246 https://www.encodeproject.org/files/ENCFF025JYV/@@download/ENCFF025JYV.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF244YBI bigWig signal p-value ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF209PBB, ENCFF370PSF, ENCFF993WWR, ENCFF995OIG 1056509029 ENCODE Processing Pipeline d64c45f1b286e3185e0c5d4030ccfbfe https://www.encodeproject.org/files/ENCFF244YBI/@@download/ENCFF244YBI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF032DMC bigWig fold change over control ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF209PBB, ENCFF370PSF, ENCFF993WWR, ENCFF995OIG 1273473457 ENCODE Processing Pipeline 657093738d8b781700b4bfd2821d7499 https://www.encodeproject.org/files/ENCFF032DMC/@@download/ENCFF032DMC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF517WIH bigWig fold change over control ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 ENCFF209PBB, ENCFF370PSF, ENCFF995OIG 984843499 ENCODE Processing Pipeline 3a52498b29454cfe2e31843dc1f8b388 https://www.encodeproject.org/files/ENCFF517WIH/@@download/ENCFF517WIH.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF601XGO bigWig fold change over control ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 ENCFF370PSF, ENCFF993WWR, ENCFF995OIG 687941407 ENCODE Processing Pipeline 4dfef98ec887fda9fbfb14de170f23f1 https://www.encodeproject.org/files/ENCFF601XGO/@@download/ENCFF601XGO.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF565RDY bed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 ENCFF370PSF, ENCFF993WWR, ENCFF995OIG 5693935 ENCODE Processing Pipeline 4a4ab05ed1ce47227fbcefcbea24ab6f https://www.encodeproject.org/files/ENCFF565RDY/@@download/ENCFF565RDY.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF113UWU bed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 ENCFF209PBB, ENCFF370PSF, ENCFF995OIG 6305370 ENCODE Processing Pipeline 5dfc07f61a705d0535abe28014845fe2 https://www.encodeproject.org/files/ENCFF113UWU/@@download/ENCFF113UWU.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF759EYE bed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF209PBB, ENCFF370PSF, ENCFF993WWR, ENCFF995OIG 6733870 ENCODE Processing Pipeline 8802370e67c9efeb4c017e05283dddab https://www.encodeproject.org/files/ENCFF759EYE/@@download/ENCFF759EYE.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF838EDW bigBed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 2 ENCFF113UWU 13545208 ENCODE Processing Pipeline e595387e885ea30a5654e44f0a71ae93 https://www.encodeproject.org/files/ENCFF838EDW/@@download/ENCFF838EDW.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF414OTU bigBed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1 ENCFF565RDY 13539307 ENCODE Processing Pipeline 5993f89b83db7b96a89a466c47396794 https://www.encodeproject.org/files/ENCFF414OTU/@@download/ENCFF414OTU.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF188OKZ bigBed narrowPeak conservative idr thresholded peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF520SXF 217693 ENCODE Processing Pipeline 53501cb454d8164a834623d31c909707 https://www.encodeproject.org/files/ENCFF188OKZ/@@download/ENCFF188OKZ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF233NGG bigBed narrowPeak peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF759EYE 13575117 ENCODE Processing Pipeline af11f1f3ca9abe0854c2a13f3e0592b5 https://www.encodeproject.org/files/ENCFF233NGG/@@download/ENCFF233NGG.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF882UHR bed narrowPeak optimal idr thresholded peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF113UWU, ENCFF419RSJ, ENCFF565RDY, ENCFF759EYE 96010 ENCODE Processing Pipeline 852acd50121e65d74c2a177316213e72 https://www.encodeproject.org/files/ENCFF882UHR/@@download/ENCFF882UHR.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF463LWI bigBed narrowPeak optimal idr thresholded peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF882UHR 243125 ENCODE Processing Pipeline 57fa7cf1e66bc88c32a2f22ed9c4ee2e https://www.encodeproject.org/files/ENCFF463LWI/@@download/ENCFF463LWI.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF520SXF bed narrowPeak conservative idr thresholded peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF113UWU, ENCFF419RSJ, ENCFF565RDY, ENCFF759EYE 80436 ENCODE Processing Pipeline f1261f5860dc12595a945bbe8d1474dc https://www.encodeproject.org/files/ENCFF520SXF/@@download/ENCFF520SXF.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF200OIV bigBed narrowPeak conservative idr thresholded peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF376RVN 162648 ENCODE Processing Pipeline a9a80cf7010f4b43cfff54377263403a https://www.encodeproject.org/files/ENCFF200OIV/@@download/ENCFF200OIV.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF726ASD bigBed narrowPeak optimal idr thresholded peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF756LUP 175450 ENCODE Processing Pipeline 557dae95dc086066482e6126d4db413f https://www.encodeproject.org/files/ENCFF726ASD/@@download/ENCFF726ASD.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF376RVN bed narrowPeak conservative idr thresholded peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF001TDO, ENCFF774TWW, ENCFF862YTD, ENCFF868FGE 67705 ENCODE Processing Pipeline c04c1aa0a59b3b22e599b7fffffe5f70 https://www.encodeproject.org/files/ENCFF376RVN/@@download/ENCFF376RVN.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF756LUP bed narrowPeak optimal idr thresholded peaks ENCSR345YWJ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-23 ENCODE 1, 2 ENCFF001TDO, ENCFF774TWW, ENCFF862YTD, ENCFF868FGE 77158 ENCODE Processing Pipeline 3d75c04365d91d1c459024b405544aae https://www.encodeproject.org/files/ENCFF756LUP/@@download/ENCFF756LUP.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF000QHI bigBed broadPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001ULL 429738 Richard Myers, HAIB f9536abec6c1132b6776373996d03954 https://www.encodeproject.org/files/ENCFF000QHI/@@download/ENCFF000QHI.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000QHJ bigBed broadPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001ULM 312248 Richard Myers, HAIB f0b40451cfa204ef928d79c8dbddec86 https://www.encodeproject.org/files/ENCFF000QHJ/@@download/ENCFF000QHJ.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000QHL bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QIB 1857020943 Richard Myers, HAIB d002541fee6a8bddb5c89aa53dd7eb02 https://www.encodeproject.org/files/ENCFF000QHL/@@download/ENCFF000QHL.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000QHM bigWig raw signal ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 1 30382906 Richard Myers, HAIB 084d8d7262ad06fc523850182e3ad6b7 https://www.encodeproject.org/files/ENCFF000QHM/@@download/ENCFF000QHM.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF000QHN bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QID 2074379467 Richard Myers, HAIB d28d623b6fff281f9f0b2ffd405b97d0 https://www.encodeproject.org/files/ENCFF000QHN/@@download/ENCFF000QHN.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000QHO bigWig raw signal ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 1 20159200 Richard Myers, HAIB 05494b1e2ab8745803258f35a08125a5 https://www.encodeproject.org/files/ENCFF000QHO/@@download/ENCFF000QHO.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF000QIB fastq reads ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1775274771 Richard Myers, HAIB 753d7cbd2c5bb0aa7a27db2b3f1c232b https://www.encodeproject.org/files/ENCFF000QIB/@@download/ENCFF000QIB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000QID fastq reads ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1970505014 Richard Myers, HAIB c39c0243f34877beff7e07e55223824f https://www.encodeproject.org/files/ENCFF000QID/@@download/ENCFF000QID.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFJ/ released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF001ULL bed broadPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 1 234403 Richard Myers, HAIB 9e621be00defddae25724931841fa8b5 https://www.encodeproject.org/files/ENCFF001ULL/@@download/ENCFF001ULL.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF001ULM bed broadPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 1 143298 Richard Myers, HAIB dd498413aa76fb71d86c44612010229d https://www.encodeproject.org/files/ENCFF001ULM/@@download/ENCFF001ULM.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF002CMQ bed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 221518 ENCODE Consortium Analysis Working Group 3e5196912f2efefafdfbb24469bf2423 https://www.encodeproject.org/files/ENCFF002CMQ/@@download/ENCFF002CMQ.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF991EKU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE ENCFF002CMQ 526292 ENCODE Consortium faf17c07e3e7d8f7d3a82774dd0fc630 https://www.encodeproject.org/files/ENCFF991EKU/@@download/ENCFF991EKU.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF989BZQ bam unfiltered alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIB, ENCFF643CGH 1989527175 ENCODE Processing Pipeline bfd473c4fae8e4a38bed42edd2c20c03 https://www.encodeproject.org/files/ENCFF989BZQ/@@download/ENCFF989BZQ.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF222UZK bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIB, ENCFF643CGH 1296042131 ENCODE Processing Pipeline 9c4f3d1e8c601da3d6169561b011b774 https://www.encodeproject.org/files/ENCFF222UZK/@@download/ENCFF222UZK.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF560FJD bam unfiltered alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QID, ENCFF643CGH 2223125883 ENCODE Processing Pipeline 8f461e79f9b21d3b3213872d0087d661 https://www.encodeproject.org/files/ENCFF560FJD/@@download/ENCFF560FJD.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF526DBU bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QID, ENCFF643CGH 1470060274 ENCODE Processing Pipeline 20b7e2b1fa239e377d49ad247f1cfaaf https://www.encodeproject.org/files/ENCFF526DBU/@@download/ENCFF526DBU.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF876COD bam unfiltered alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIB, ENCFF807MUK 1984243732 ENCODE Processing Pipeline 42f979f34f523624afd00052d6fcf760 https://www.encodeproject.org/files/ENCFF876COD/@@download/ENCFF876COD.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF404IDD bam unfiltered alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QID, ENCFF807MUK 2214226379 ENCODE Processing Pipeline 6f06778e694435df45c347cf5ff17660 https://www.encodeproject.org/files/ENCFF404IDD/@@download/ENCFF404IDD.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF448TVU bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIB, ENCFF807MUK 1296506873 ENCODE Processing Pipeline abe25ba4670746723789251d9e1a7139 https://www.encodeproject.org/files/ENCFF448TVU/@@download/ENCFF448TVU.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF711QEM bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QID, ENCFF807MUK 1470601491 ENCODE Processing Pipeline dfb68d2387b539ec5079fb0b50671034 https://www.encodeproject.org/files/ENCFF711QEM/@@download/ENCFF711QEM.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF997GFC bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF222UZK, ENCFF533FQH, ENCFF836OEO 983595831 ENCODE Processing Pipeline 3bb20a4853376f9c0569545e753458af https://www.encodeproject.org/files/ENCFF997GFC/@@download/ENCFF997GFC.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF264KML bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 1018124105 ENCODE Processing Pipeline 1a5539a2c128c8ea38e4a88080823043 https://www.encodeproject.org/files/ENCFF264KML/@@download/ENCFF264KML.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF641YMU bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF222UZK, ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 1390868577 ENCODE Processing Pipeline 279e1ad3698ecb2be26a308eeb4a45b8 https://www.encodeproject.org/files/ENCFF641YMU/@@download/ENCFF641YMU.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF964JOG bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF222UZK, ENCFF533FQH, ENCFF836OEO 858150727 ENCODE Processing Pipeline 0cc7c32c4c1caac7b0387ded74ba94ff https://www.encodeproject.org/files/ENCFF964JOG/@@download/ENCFF964JOG.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF738ISI bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF222UZK, ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 1351596151 ENCODE Processing Pipeline 43cd8947ad562cfae79bbc2ab73af965 https://www.encodeproject.org/files/ENCFF738ISI/@@download/ENCFF738ISI.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF253IEH bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 922958129 ENCODE Processing Pipeline 763f61ecd6850a0fcbb78fbb194e3f9c https://www.encodeproject.org/files/ENCFF253IEH/@@download/ENCFF253IEH.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF788VWT bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF222UZK, ENCFF533FQH, ENCFF836OEO 6222897 ENCODE Processing Pipeline 54254c31c8f876ab8e61083e9d1c4523 https://www.encodeproject.org/files/ENCFF788VWT/@@download/ENCFF788VWT.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF489GYZ bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF651KJX 13412398 ENCODE Processing Pipeline 001d25cc96b6b4e1d2fccfc7f58edfaf https://www.encodeproject.org/files/ENCFF489GYZ/@@download/ENCFF489GYZ.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF651KJX bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF222UZK, ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 6834126 ENCODE Processing Pipeline 30af8f308b4b5023fc7195e6db502b05 https://www.encodeproject.org/files/ENCFF651KJX/@@download/ENCFF651KJX.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF916OUG bed narrowPeak conservative idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313VQW, ENCFF419RSJ, ENCFF651KJX, ENCFF788VWT 168648 ENCODE Processing Pipeline c43ed1d7e6aa9735cf1fe51825df27ed https://www.encodeproject.org/files/ENCFF916OUG/@@download/ENCFF916OUG.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF065VPF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF916OUG 382971 ENCODE Processing Pipeline 2875015d63ac92c1311443844f03d414 https://www.encodeproject.org/files/ENCFF065VPF/@@download/ENCFF065VPF.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF313VQW bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 6072430 ENCODE Processing Pipeline 42b19a4904c846138e74f4eaef8128bc https://www.encodeproject.org/files/ENCFF313VQW/@@download/ENCFF313VQW.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF517IXK bed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313VQW, ENCFF419RSJ, ENCFF651KJX, ENCFF788VWT 236998 ENCODE Processing Pipeline 25aaa0e8f779d8d52cd52bed7d3e3c34 https://www.encodeproject.org/files/ENCFF517IXK/@@download/ENCFF517IXK.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF930EDE bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF788VWT 13404554 ENCODE Processing Pipeline 10eeaa396281742a8d4864b7e9aee2b7 https://www.encodeproject.org/files/ENCFF930EDE/@@download/ENCFF930EDE.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF896AZL bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF313VQW 11344552 ENCODE Processing Pipeline 544629796b87fc3dbf634daf06a07941 https://www.encodeproject.org/files/ENCFF896AZL/@@download/ENCFF896AZL.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF994QPA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF517IXK 481509 ENCODE Processing Pipeline 07e0e34298b24eec186e8a7d49705ce3 https://www.encodeproject.org/files/ENCFF994QPA/@@download/ENCFF994QPA.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF237FXB fastq reads ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 1 50 single-ended 1297121094 Richard Myers, HAIB 488fd5bc635793847b18f91d57396a07 SRA:SRR5338626 https://www.encodeproject.org/files/ENCFF237FXB/@@download/ENCFF237FXB.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF214CAS fastq reads ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 1 50 single-ended 2122806489 Richard Myers, HAIB 97c872f5a5f5872bfe06155cd0920c91 SRA:SRR5338625 https://www.encodeproject.org/files/ENCFF214CAS/@@download/ENCFF214CAS.fastq.gz HiSeq 2000 /files/ENCFF929JYK/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF078KAC bigWig signal p-value ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 ENCFF336QNE, ENCFF991UTU 708941408 ENCODE Processing Pipeline dd8bee3c00e8eb2a064c18c0bf3e2196 https://www.encodeproject.org/files/ENCFF078KAC/@@download/ENCFF078KAC.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF727HJU bigWig signal p-value ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 ENCFF645WBK, ENCFF807CUF 670194973 ENCODE Processing Pipeline 285b237db06aae4e5a98c90b60787241 https://www.encodeproject.org/files/ENCFF727HJU/@@download/ENCFF727HJU.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF892IBT bigWig fold change over control ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 ENCFF336QNE, ENCFF991UTU 588601058 ENCODE Processing Pipeline 08cc30e273f1615b487c99aed1e8c727 https://www.encodeproject.org/files/ENCFF892IBT/@@download/ENCFF892IBT.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF841NBW bigWig fold change over control ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 ENCFF645WBK, ENCFF807CUF 596713123 ENCODE Processing Pipeline 2778d8ded0a90b9aa965588d0db8b9d9 https://www.encodeproject.org/files/ENCFF841NBW/@@download/ENCFF841NBW.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF479MXG bam unfiltered alignments ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 50 ENCFF214CAS, ENCFF643CGH 2144577178 ENCODE Processing Pipeline 2216ef5d0dea8db86f5b66f0aa2149bb https://www.encodeproject.org/files/ENCFF479MXG/@@download/ENCFF479MXG.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF794KUE bam unfiltered alignments ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 50 ENCFF237FXB, ENCFF643CGH 1427404509 ENCODE Processing Pipeline 0f2036749af37b9110d252ec95580ad4 https://www.encodeproject.org/files/ENCFF794KUE/@@download/ENCFF794KUE.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF872UEY bam alignments ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 50 ENCFF214CAS, ENCFF643CGH 1240977271 ENCODE Processing Pipeline c71bdb9fb79bf8a7bc097d77a7839d84 https://www.encodeproject.org/files/ENCFF872UEY/@@download/ENCFF872UEY.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF965BTP bam alignments ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 50 ENCFF237FXB, ENCFF643CGH 1018502603 ENCODE Processing Pipeline fda6cdc351a62472b555a992fd602428 https://www.encodeproject.org/files/ENCFF965BTP/@@download/ENCFF965BTP.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF985NAR bigWig signal p-value ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 ENCFF370PSF, ENCFF965BTP 587819222 ENCODE Processing Pipeline 8c2e1b7f000ee7ca4e6b3b617bf72911 https://www.encodeproject.org/files/ENCFF985NAR/@@download/ENCFF985NAR.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF471WWP bigWig signal p-value ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 ENCFF406XEH, ENCFF872UEY 663833762 ENCODE Processing Pipeline 2a723b6e2e05a3141d3defe335cf52d8 https://www.encodeproject.org/files/ENCFF471WWP/@@download/ENCFF471WWP.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF264JJF bigWig signal p-value ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF370PSF, ENCFF406XEH, ENCFF872UEY, ENCFF965BTP 1229159066 ENCODE Processing Pipeline 2a992fedba7ac4bcc91f618dbffd47b1 https://www.encodeproject.org/files/ENCFF264JJF/@@download/ENCFF264JJF.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF621RVJ bigWig fold change over control ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 ENCFF370PSF, ENCFF965BTP 596450289 ENCODE Processing Pipeline 0334529a667d08e9899769c897e9fbe1 https://www.encodeproject.org/files/ENCFF621RVJ/@@download/ENCFF621RVJ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF076UYR bigWig fold change over control ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 ENCFF406XEH, ENCFF872UEY 589460100 ENCODE Processing Pipeline 5fbd31af64986773b4c700cd20d724aa https://www.encodeproject.org/files/ENCFF076UYR/@@download/ENCFF076UYR.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF882NIX bigWig fold change over control ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF370PSF, ENCFF406XEH, ENCFF872UEY, ENCFF965BTP 1285805377 ENCODE Processing Pipeline 5344bbabb0e46177f7d98274a0758b69 https://www.encodeproject.org/files/ENCFF882NIX/@@download/ENCFF882NIX.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF845XIS bed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 ENCFF406XEH, ENCFF872UEY 5203121 ENCODE Processing Pipeline 0987865403b1f44e5987d22c3b7e3f71 https://www.encodeproject.org/files/ENCFF845XIS/@@download/ENCFF845XIS.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF678OZN bigBed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 ENCFF845XIS 11027982 ENCODE Processing Pipeline 0c7ade70aad6a2d9baf0940ce317fb05 https://www.encodeproject.org/files/ENCFF678OZN/@@download/ENCFF678OZN.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF366SCN bigBed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 ENCFF820IFR 13451664 ENCODE Processing Pipeline 9c9a26b6a5b6926b825e5cd2bd46629f https://www.encodeproject.org/files/ENCFF366SCN/@@download/ENCFF366SCN.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF820IFR bed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 ENCFF370PSF, ENCFF965BTP 5628341 ENCODE Processing Pipeline 7c983cd9ad4c6bde47f856efaae0d300 https://www.encodeproject.org/files/ENCFF820IFR/@@download/ENCFF820IFR.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF344XWK bed narrowPeak optimal idr thresholded peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF419RSJ, ENCFF661JYP, ENCFF820IFR, ENCFF845XIS 107086 ENCODE Processing Pipeline 7d1384bd7b353bb9d09a0a86ccff9453 https://www.encodeproject.org/files/ENCFF344XWK/@@download/ENCFF344XWK.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF661JYP bed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF370PSF, ENCFF406XEH, ENCFF872UEY, ENCFF965BTP 6792262 ENCODE Processing Pipeline f55f2f5a14ce8508d88583c6394bc1eb https://www.encodeproject.org/files/ENCFF661JYP/@@download/ENCFF661JYP.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF615ADK bigBed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF661JYP 13291242 ENCODE Processing Pipeline cd94db8dca07eb6393ea91b72ed09f07 https://www.encodeproject.org/files/ENCFF615ADK/@@download/ENCFF615ADK.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF668PRX bigBed narrowPeak optimal idr thresholded peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF344XWK 273384 ENCODE Processing Pipeline 0594f897d4a1d16c11197b1c4ddd5a13 https://www.encodeproject.org/files/ENCFF668PRX/@@download/ENCFF668PRX.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF466WMY bam unfiltered alignments ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 50 ENCFF237FXB, ENCFF807MUK 1419654230 ENCODE Processing Pipeline 9642619790e06bebff7bc5dcfba37000 https://www.encodeproject.org/files/ENCFF466WMY/@@download/ENCFF466WMY.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF336QNE bam alignments ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 50 ENCFF237FXB, ENCFF807MUK 1018402347 ENCODE Processing Pipeline e7e0381615b82c04b00ffb62726ca653 https://www.encodeproject.org/files/ENCFF336QNE/@@download/ENCFF336QNE.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF645WBK bam alignments ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 50 ENCFF214CAS, ENCFF807MUK 1240891913 ENCODE Processing Pipeline 68663c68d73eb09c4872e51c4bd89ae8 https://www.encodeproject.org/files/ENCFF645WBK/@@download/ENCFF645WBK.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF953PGS bam unfiltered alignments ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 50 ENCFF214CAS, ENCFF807MUK 2134411693 ENCODE Processing Pipeline 0fcaa22da773fa6d5ade5048c1162fcc https://www.encodeproject.org/files/ENCFF953PGS/@@download/ENCFF953PGS.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF989EBM bigWig fold change over control ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF336QNE, ENCFF645WBK, ENCFF807CUF, ENCFF991UTU 1270632266 ENCODE Processing Pipeline 02c4b743e5ca55664cff95f75d839996 https://www.encodeproject.org/files/ENCFF989EBM/@@download/ENCFF989EBM.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF030PHB bed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 ENCFF336QNE, ENCFF991UTU 5635996 ENCODE Processing Pipeline 1eb2c8b251cda7f036a4aa014221b88a https://www.encodeproject.org/files/ENCFF030PHB/@@download/ENCFF030PHB.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF840WSA bigWig signal p-value ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF336QNE, ENCFF645WBK, ENCFF807CUF, ENCFF991UTU 1299959289 ENCODE Processing Pipeline 0407a5adb434d73a37b18f1663f9ef02 https://www.encodeproject.org/files/ENCFF840WSA/@@download/ENCFF840WSA.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF314VOK bed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 ENCFF645WBK, ENCFF807CUF 5215902 ENCODE Processing Pipeline ee39665b68439cbcca6045dff206b554 https://www.encodeproject.org/files/ENCFF314VOK/@@download/ENCFF314VOK.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF236XBR bed narrowPeak optimal idr thresholded peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF001TDO, ENCFF030PHB, ENCFF314VOK, ENCFF808RKL 106579 ENCODE Processing Pipeline 738397904efa4a1ce7b50f6bca1fb8ef https://www.encodeproject.org/files/ENCFF236XBR/@@download/ENCFF236XBR.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF714YQU bigBed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1 ENCFF030PHB 13449131 ENCODE Processing Pipeline faa6887bc97721b99d7123e72a97c715 https://www.encodeproject.org/files/ENCFF714YQU/@@download/ENCFF714YQU.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF698DMD bigBed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF808RKL 13285026 ENCODE Processing Pipeline c2f8b17262c49c3b89b1681e6a83d317 https://www.encodeproject.org/files/ENCFF698DMD/@@download/ENCFF698DMD.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF950ZVM bigBed narrowPeak optimal idr thresholded peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF236XBR 270762 ENCODE Processing Pipeline f201099c8888750d1aedb023778a67de https://www.encodeproject.org/files/ENCFF950ZVM/@@download/ENCFF950ZVM.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF664GCG bigBed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 2 ENCFF314VOK 11020497 ENCODE Processing Pipeline 5a97dfcd0394a14b10afa348275c7849 https://www.encodeproject.org/files/ENCFF664GCG/@@download/ENCFF664GCG.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF808RKL bed narrowPeak peaks ENCSR350ORK ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-09-09 ENCODE 1, 2 ENCFF336QNE, ENCFF645WBK, ENCFF807CUF, ENCFF991UTU 6794365 ENCODE Processing Pipeline 8ffce67edd788d2eb1bae09de5e0f5ac https://www.encodeproject.org/files/ENCFF808RKL/@@download/ENCFF808RKL.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF996PYT fastq reads ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 1 50 single-ended 2181690719 Richard Myers, HAIB a7662c3b68d17a971d8d0b57ba8596ce SRA:SRR5331456 https://www.encodeproject.org/files/ENCFF996PYT/@@download/ENCFF996PYT.fastq.gz HiSeq 2000 /files/ENCFF929JYK/ released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF876KCK fastq reads ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 1 50 single-ended 1691511032 Richard Myers, HAIB 641e3d924d9b3981ed59f9d39b5ac5b4 SRA:SRR5331457 https://www.encodeproject.org/files/ENCFF876KCK/@@download/ENCFF876KCK.fastq.gz HiSeq 2000 /files/ENCFF958NMQ/ released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF476XCQ bam alignments ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 50 ENCFF807MUK, ENCFF876KCK 1414385602 ENCODE Processing Pipeline 4fa190cf168a839789c23d3ed15db370 https://www.encodeproject.org/files/ENCFF476XCQ/@@download/ENCFF476XCQ.bam hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF069OPS bam alignments ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 50 ENCFF807MUK, ENCFF996PYT 1779048485 ENCODE Processing Pipeline 0e765d414096a4611aee31f6e7a94152 https://www.encodeproject.org/files/ENCFF069OPS/@@download/ENCFF069OPS.bam hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF368FBI bigWig signal p-value ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF476XCQ, ENCFF654EHF, ENCFF807CUF 1000013025 ENCODE Processing Pipeline f07e38fb336d2ff28b699010abe54286 https://www.encodeproject.org/files/ENCFF368FBI/@@download/ENCFF368FBI.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF654HCG bigWig signal p-value ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF069OPS, ENCFF654EHF, ENCFF807CUF 1159622638 ENCODE Processing Pipeline 3c159a9817bcce8b019039cf06e00a1e https://www.encodeproject.org/files/ENCFF654HCG/@@download/ENCFF654HCG.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF030BJR bigWig signal p-value ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF069OPS, ENCFF476XCQ, ENCFF654EHF, ENCFF807CUF 1474384313 ENCODE Processing Pipeline db253402bf7c4397ec067e61dfd61a95 https://www.encodeproject.org/files/ENCFF030BJR/@@download/ENCFF030BJR.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF005SBK bigWig fold change over control ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF476XCQ, ENCFF654EHF, ENCFF807CUF 1046598032 ENCODE Processing Pipeline 40f8c11a006da99268c8f5abe1906a90 https://www.encodeproject.org/files/ENCFF005SBK/@@download/ENCFF005SBK.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF765DQP bigWig fold change over control ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF069OPS, ENCFF654EHF, ENCFF807CUF 1028414978 ENCODE Processing Pipeline f4c117b8c1707e5947147424447fba3c https://www.encodeproject.org/files/ENCFF765DQP/@@download/ENCFF765DQP.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF128ZQH bed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF476XCQ, ENCFF654EHF, ENCFF807CUF 6644952 ENCODE Processing Pipeline a1b971d02033ccb6ad2b14cd75b14bf0 https://www.encodeproject.org/files/ENCFF128ZQH/@@download/ENCFF128ZQH.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF853ZNE bed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF069OPS, ENCFF654EHF, ENCFF807CUF 6487660 ENCODE Processing Pipeline 1b89d3e45d2d80750516edc45ed84b43 https://www.encodeproject.org/files/ENCFF853ZNE/@@download/ENCFF853ZNE.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF315FCJ bed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF069OPS, ENCFF476XCQ, ENCFF654EHF, ENCFF807CUF 7086237 ENCODE Processing Pipeline 478a2e78950f2ffcf14e592ef8988c9b https://www.encodeproject.org/files/ENCFF315FCJ/@@download/ENCFF315FCJ.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF502PFD bigWig fold change over control ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF069OPS, ENCFF476XCQ, ENCFF654EHF, ENCFF807CUF 1522707178 ENCODE Processing Pipeline e7a8ad0e00b4382a36e4d8002b153ab2 https://www.encodeproject.org/files/ENCFF502PFD/@@download/ENCFF502PFD.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF715XIY bigBed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF128ZQH 13514513 ENCODE Processing Pipeline 5f7ac1389e5a5208c3841f5ed08a45a4 https://www.encodeproject.org/files/ENCFF715XIY/@@download/ENCFF715XIY.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF781QSZ bigBed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF853ZNE 13603755 ENCODE Processing Pipeline 04cb7923340a6276482a8b34c7b3d913 https://www.encodeproject.org/files/ENCFF781QSZ/@@download/ENCFF781QSZ.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF290QTK bigBed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF315FCJ 13500343 ENCODE Processing Pipeline fe64a6f447bec4e91920726115b5e364 https://www.encodeproject.org/files/ENCFF290QTK/@@download/ENCFF290QTK.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF214HUH bam unfiltered alignments ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 50 ENCFF643CGH, ENCFF876KCK 1925212075 ENCODE Processing Pipeline f1c183f76194b89e7e6907b105a77608 https://www.encodeproject.org/files/ENCFF214HUH/@@download/ENCFF214HUH.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF379HKK bam unfiltered alignments ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 50 ENCFF643CGH, ENCFF996PYT 2486482286 ENCODE Processing Pipeline 84decd1eeb0c1795ca8ec68cc362b8cf https://www.encodeproject.org/files/ENCFF379HKK/@@download/ENCFF379HKK.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF521EJT bam alignments ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 50 ENCFF643CGH, ENCFF876KCK 1414498841 ENCODE Processing Pipeline 39452f880c15edbd04354e3c273a4507 https://www.encodeproject.org/files/ENCFF521EJT/@@download/ENCFF521EJT.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF601UUP bam alignments ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 50 ENCFF643CGH, ENCFF996PYT 1779406440 ENCODE Processing Pipeline 78c47e4cf07019190e3fd7438929d356 https://www.encodeproject.org/files/ENCFF601UUP/@@download/ENCFF601UUP.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF829GGC bigWig signal p-value ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF406XEH, ENCFF521EJT, ENCFF995OIG 1234409126 ENCODE Processing Pipeline 3d1779529ea2b8dc1f4f6d39566a0d30 https://www.encodeproject.org/files/ENCFF829GGC/@@download/ENCFF829GGC.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF765YOQ bigWig signal p-value ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF406XEH, ENCFF601UUP, ENCFF995OIG 1071856824 ENCODE Processing Pipeline 4ccc971a9f0eb66cbb5de991a82d2109 https://www.encodeproject.org/files/ENCFF765YOQ/@@download/ENCFF765YOQ.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF521FKC bigWig signal p-value ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF406XEH, ENCFF521EJT, ENCFF601UUP, ENCFF995OIG 1248819657 ENCODE Processing Pipeline 7f9667e10797d0ba8628e04ab46b431c https://www.encodeproject.org/files/ENCFF521FKC/@@download/ENCFF521FKC.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF128CWH bigWig fold change over control ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF406XEH, ENCFF521EJT, ENCFF995OIG 1052966097 ENCODE Processing Pipeline bb3c2e3467d3198d9248a608b236fd89 https://www.encodeproject.org/files/ENCFF128CWH/@@download/ENCFF128CWH.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF146NMG bed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF406XEH, ENCFF601UUP, ENCFF995OIG 6222027 ENCODE Processing Pipeline 06f4066b7db987abab46b970ccd80bd5 https://www.encodeproject.org/files/ENCFF146NMG/@@download/ENCFF146NMG.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF327MYH bigWig fold change over control ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF406XEH, ENCFF601UUP, ENCFF995OIG 1035979477 ENCODE Processing Pipeline c14ead30e73b4cdc32e408fc0521377f https://www.encodeproject.org/files/ENCFF327MYH/@@download/ENCFF327MYH.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF328EUU bigWig fold change over control ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF406XEH, ENCFF521EJT, ENCFF601UUP, ENCFF995OIG 1526566245 ENCODE Processing Pipeline c22f3aadd3d01d688fe474e821f7e23a https://www.encodeproject.org/files/ENCFF328EUU/@@download/ENCFF328EUU.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF782SGI bed narrowPeak optimal idr thresholded peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF146NMG, ENCFF419RSJ, ENCFF614BYF, ENCFF996MTB 312928 ENCODE Processing Pipeline 6a1fcad398db78418aa8d0c8f5dd714e https://www.encodeproject.org/files/ENCFF782SGI/@@download/ENCFF782SGI.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF614BYF bed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF406XEH, ENCFF521EJT, ENCFF995OIG 6449027 ENCODE Processing Pipeline 31a9bb644b6309da0203f58cf0929be0 https://www.encodeproject.org/files/ENCFF614BYF/@@download/ENCFF614BYF.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF655AOY bed narrowPeak conservative idr thresholded peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF146NMG, ENCFF419RSJ, ENCFF614BYF, ENCFF996MTB 304018 ENCODE Processing Pipeline 02fb510596c0b501300930395e0c58e9 https://www.encodeproject.org/files/ENCFF655AOY/@@download/ENCFF655AOY.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF655QZP bigBed narrowPeak conservative idr thresholded peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF655AOY 674010 ENCODE Processing Pipeline a56f58349182d8b86d10fb27312b4b8e https://www.encodeproject.org/files/ENCFF655QZP/@@download/ENCFF655QZP.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF996MTB bed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF406XEH, ENCFF521EJT, ENCFF601UUP, ENCFF995OIG 6975710 ENCODE Processing Pipeline a6b8a89ebb295efa56b5eab98a36e03f https://www.encodeproject.org/files/ENCFF996MTB/@@download/ENCFF996MTB.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF671PZR bigBed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF146NMG 13599448 ENCODE Processing Pipeline a38d49b95c8a26b488a519f2187c73cd https://www.encodeproject.org/files/ENCFF671PZR/@@download/ENCFF671PZR.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF864ZLI bigBed narrowPeak optimal idr thresholded peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF782SGI 689016 ENCODE Processing Pipeline d573ae3a1c722250940f83e3853fdc25 https://www.encodeproject.org/files/ENCFF864ZLI/@@download/ENCFF864ZLI.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF539KBN bigBed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF614BYF 13515340 ENCODE Processing Pipeline 419e37009b8dc0e2e46b20b6b15923f2 https://www.encodeproject.org/files/ENCFF539KBN/@@download/ENCFF539KBN.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF229XRU bigBed narrowPeak peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF996MTB 13517014 ENCODE Processing Pipeline 762cb73cbda2e7dab1240be393b955fc https://www.encodeproject.org/files/ENCFF229XRU/@@download/ENCFF229XRU.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF643PNJ bigBed narrowPeak conservative idr thresholded peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF966CBP 485417 ENCODE Processing Pipeline 8d83cab1d1fe404f8adedec6859e226f https://www.encodeproject.org/files/ENCFF643PNJ/@@download/ENCFF643PNJ.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF789XEL bigBed narrowPeak optimal idr thresholded peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF963GDB 501746 ENCODE Processing Pipeline 00c756fdc8c0dad9eaaaa4fadbbcec22 https://www.encodeproject.org/files/ENCFF789XEL/@@download/ENCFF789XEL.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF966CBP bed narrowPeak conservative idr thresholded peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF128ZQH, ENCFF315FCJ, ENCFF853ZNE 257969 ENCODE Processing Pipeline b7135f28fc9d60f17da8ed63b3f1c9cd https://www.encodeproject.org/files/ENCFF966CBP/@@download/ENCFF966CBP.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF963GDB bed narrowPeak optimal idr thresholded peaks ENCSR205FOW ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF128ZQH, ENCFF315FCJ, ENCFF853ZNE 270502 ENCODE Processing Pipeline a64761d8974058ef1c282dfb231db1a5 https://www.encodeproject.org/files/ENCFF963GDB/@@download/ENCFF963GDB.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF000NGL bam alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NGY 1755232014 Richard Myers, HAIB 2bc2325ace585bf0fc51937830a62585 https://www.encodeproject.org/files/ENCFF000NGL/@@download/ENCFF000NGL.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NGO bigBed broadPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TTL 400778 Richard Myers, HAIB cb1b701dfcff6c2c1770b5a2c1321836 https://www.encodeproject.org/files/ENCFF000NGO/@@download/ENCFF000NGO.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NGP bigBed broadPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TTM 326794 Richard Myers, HAIB b87d4c76e7a51d5bb115c68c2a7f80a2 https://www.encodeproject.org/files/ENCFF000NGP/@@download/ENCFF000NGP.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NGQ bigWig raw signal ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 1 25451942 Richard Myers, HAIB 22b216ec7ae0f7856550843a10295c9e https://www.encodeproject.org/files/ENCFF000NGQ/@@download/ENCFF000NGQ.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NGR bam alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NHA 1730088651 Richard Myers, HAIB 643c04fc62e94fd4c7126727c35b336b https://www.encodeproject.org/files/ENCFF000NGR/@@download/ENCFF000NGR.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NGS bigWig raw signal ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 1 20656077 Richard Myers, HAIB 98c9abe0e812b0f48171644c7d691926 https://www.encodeproject.org/files/ENCFF000NGS/@@download/ENCFF000NGS.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NGY fastq reads ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1731165739 Richard Myers, HAIB 6d0fa75898c9d74ba47c69c38d550d64 https://www.encodeproject.org/files/ENCFF000NGY/@@download/ENCFF000NGY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF000NHA fastq reads ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1649362925 Richard Myers, HAIB 3f9c45cc64929e4e6d4b42f26389fb1b https://www.encodeproject.org/files/ENCFF000NHA/@@download/ENCFF000NHA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF001TTL bed broadPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 1 229516 Richard Myers, HAIB 9f4b6a3c7f73a81173ef79e41ea4b568 https://www.encodeproject.org/files/ENCFF001TTL/@@download/ENCFF001TTL.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF001TTM bed broadPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 1 170263 Richard Myers, HAIB 02f4de8a6d2ae2da5b1f2e387bdfee09 https://www.encodeproject.org/files/ENCFF001TTM/@@download/ENCFF001TTM.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF002CFY bed narrowPeak optimal idr thresholded peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 150969 ENCODE Consortium Analysis Working Group 387239066cdb309b4f457cffb9b69b14 https://www.encodeproject.org/files/ENCFF002CFY/@@download/ENCFF002CFY.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF193BOZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE ENCFF002CFY 450578 ENCODE Consortium 7550ceaca4a77ad4ae557fff4890a83a https://www.encodeproject.org/files/ENCFF193BOZ/@@download/ENCFF193BOZ.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF327YBD bam unfiltered alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NGY, ENCFF643CGH 1911529955 ENCODE Processing Pipeline be41ebf6bf9eee090dfad80e9ee9b375 https://www.encodeproject.org/files/ENCFF327YBD/@@download/ENCFF327YBD.bam GRCh38 released low read length biological replicates with identical biosample ENCFF681HSI bam unfiltered alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHA, ENCFF643CGH 1851019740 ENCODE Processing Pipeline b926759055e4831848df31108f6339c5 https://www.encodeproject.org/files/ENCFF681HSI/@@download/ENCFF681HSI.bam GRCh38 released low read length biological replicates with identical biosample ENCFF973KMA bam alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NGY, ENCFF643CGH 1240183484 ENCODE Processing Pipeline f6bb141598b09b73ef3cca4ad3110dc6 https://www.encodeproject.org/files/ENCFF973KMA/@@download/ENCFF973KMA.bam GRCh38 released low read length biological replicates with identical biosample ENCFF805LGC bam alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHA, ENCFF643CGH 1235513477 ENCODE Processing Pipeline ab1e209a858d53e7c84e75ab4ff898e4 https://www.encodeproject.org/files/ENCFF805LGC/@@download/ENCFF805LGC.bam GRCh38 released low read length biological replicates with identical biosample ENCFF992XTA bam unfiltered alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NGY, ENCFF807MUK 1906357926 ENCODE Processing Pipeline 0609e97c6cfa9135abde92d238091331 https://www.encodeproject.org/files/ENCFF992XTA/@@download/ENCFF992XTA.bam hg19 released low read length biological replicates with identical biosample ENCFF150BKA bam unfiltered alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHA, ENCFF807MUK 1845720245 ENCODE Processing Pipeline 98efb4e66811758fa9617dec85ee0e64 https://www.encodeproject.org/files/ENCFF150BKA/@@download/ENCFF150BKA.bam hg19 released low read length biological replicates with identical biosample ENCFF154LYO bam alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHA, ENCFF807MUK 1235590110 ENCODE Processing Pipeline 25b54dbfaa0866ba87262e2a2fcc8b06 https://www.encodeproject.org/files/ENCFF154LYO/@@download/ENCFF154LYO.bam hg19 released low read length biological replicates with identical biosample ENCFF981DLK bam alignments ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NGY, ENCFF807MUK 1240248190 ENCODE Processing Pipeline bed5a02021da09334b93b7845197bca8 https://www.encodeproject.org/files/ENCFF981DLK/@@download/ENCFF981DLK.bam hg19 released low read length biological replicates with identical biosample ENCFF875FMR bigWig signal p-value ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF973KMA 633142795 ENCODE Processing Pipeline 9d429b60f5feb1b1f258731dbf2533db https://www.encodeproject.org/files/ENCFF875FMR/@@download/ENCFF875FMR.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF339RLO bigWig signal p-value ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF805LGC 788409303 ENCODE Processing Pipeline 802e8758910f2c5fcb84b4a4d8c00628 https://www.encodeproject.org/files/ENCFF339RLO/@@download/ENCFF339RLO.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF610HSM bigWig signal p-value ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF656HEF, ENCFF805LGC, ENCFF973KMA 804209153 ENCODE Processing Pipeline 45bae784722243e12cf624ed7bbbbee0 https://www.encodeproject.org/files/ENCFF610HSM/@@download/ENCFF610HSM.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF204URJ bigWig fold change over control ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF805LGC 605644050 ENCODE Processing Pipeline 2c8c9d1bd52a0d89ca0cc72445e3e1fc https://www.encodeproject.org/files/ENCFF204URJ/@@download/ENCFF204URJ.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF064JPH bigWig fold change over control ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF973KMA 611618691 ENCODE Processing Pipeline 8956ec75045946ea17d0e3bfdb4a1701 https://www.encodeproject.org/files/ENCFF064JPH/@@download/ENCFF064JPH.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF369URM bigWig fold change over control ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF656HEF, ENCFF805LGC, ENCFF973KMA 1005557377 ENCODE Processing Pipeline 5b85f28296ba897d36b76c8897de3e91 https://www.encodeproject.org/files/ENCFF369URM/@@download/ENCFF369URM.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF004HEL bigBed narrowPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF896EXB 12735732 ENCODE Processing Pipeline d9796c6bddfc42e3287b136adf41101a https://www.encodeproject.org/files/ENCFF004HEL/@@download/ENCFF004HEL.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF092AGK bigBed narrowPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF191CUL 12675922 ENCODE Processing Pipeline 9d86fc3cfe59899d10ce3a59637a209d https://www.encodeproject.org/files/ENCFF092AGK/@@download/ENCFF092AGK.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF191CUL bed narrowPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF973KMA 6911505 ENCODE Processing Pipeline 2e7db205a91229f50bdf8dda9b9735a6 https://www.encodeproject.org/files/ENCFF191CUL/@@download/ENCFF191CUL.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF241RGJ bed narrowPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF656HEF, ENCFF805LGC, ENCFF973KMA 7166889 ENCODE Processing Pipeline 92091d400a2e1264e0d006bbb62c51be https://www.encodeproject.org/files/ENCFF241RGJ/@@download/ENCFF241RGJ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF896EXB bed narrowPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF805LGC 6800782 ENCODE Processing Pipeline 6b224dbfc7e60b4f79433ff67f1d6044 https://www.encodeproject.org/files/ENCFF896EXB/@@download/ENCFF896EXB.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF708HTR bed narrowPeak optimal idr thresholded peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF191CUL, ENCFF241RGJ, ENCFF419RSJ, ENCFF896EXB 209969 ENCODE Processing Pipeline ae44d9e1ec3736eb9ffa0fef9b6abba9 https://www.encodeproject.org/files/ENCFF708HTR/@@download/ENCFF708HTR.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF929RKV bigBed narrowPeak peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF241RGJ 12525945 ENCODE Processing Pipeline fae24e0b38e2ee2775644e742464aa5d https://www.encodeproject.org/files/ENCFF929RKV/@@download/ENCFF929RKV.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF825JPM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF708HTR 452175 ENCODE Processing Pipeline 6252a017fbac6406d586d90a8ed9fcb8 https://www.encodeproject.org/files/ENCFF825JPM/@@download/ENCFF825JPM.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF002DHL fastq reads ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 1 50 single-ended 996686942 Richard Myers, HAIB b2827a2f527f45758ba7a62863ff1691 SRA:SRR5338555 https://www.encodeproject.org/files/ENCFF002DHL/@@download/ENCFF002DHL.fastq.gz HiSeq 2000 /files/ENCFF000ODZ/ released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF002DHM fastq reads ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 1 50 single-ended 1635001607 Richard Myers, HAIB c756440820d77f095bb4d3d2883f0dcd SRA:SRR5338556 https://www.encodeproject.org/files/ENCFF002DHM/@@download/ENCFF002DHM.fastq.gz HiSeq 2000 /files/ENCFF000OEB/ released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF430LJF bam unfiltered alignments ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 50 ENCFF002DHL, ENCFF643CGH 1013519629 ENCODE Processing Pipeline fbd79848814cd9dcebc27fec1eed216f https://www.encodeproject.org/files/ENCFF430LJF/@@download/ENCFF430LJF.bam GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF084LVF bam unfiltered alignments ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 50 ENCFF002DHL, ENCFF807MUK 1013326044 ENCODE Processing Pipeline f8dd888b02a5cc4c19964761ea7e6c50 https://www.encodeproject.org/files/ENCFF084LVF/@@download/ENCFF084LVF.bam hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF742KAV bam unfiltered alignments ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 50 ENCFF002DHM, ENCFF807MUK 1719737259 ENCODE Processing Pipeline 084f3ac8421c4021957b56c42bf77a89 https://www.encodeproject.org/files/ENCFF742KAV/@@download/ENCFF742KAV.bam hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF988HVR bam alignments ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 50 ENCFF002DHL, ENCFF643CGH 654294690 ENCODE Processing Pipeline 6ca05126bfff39ed58a87f863096f6fd https://www.encodeproject.org/files/ENCFF988HVR/@@download/ENCFF988HVR.bam GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF806SMA bam unfiltered alignments ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 50 ENCFF002DHM, ENCFF643CGH 1723926167 ENCODE Processing Pipeline 7f5049f4570de9eace339433734522a4 https://www.encodeproject.org/files/ENCFF806SMA/@@download/ENCFF806SMA.bam GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF249FIH bam alignments ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 50 ENCFF002DHL, ENCFF807MUK 647656900 ENCODE Processing Pipeline e08861b7b0201ccaea0152ccd609d4fa https://www.encodeproject.org/files/ENCFF249FIH/@@download/ENCFF249FIH.bam hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF178WGW bam alignments ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 50 ENCFF002DHM, ENCFF643CGH 1117340209 ENCODE Processing Pipeline bfad364c812c67af39af421d4ca9e17a https://www.encodeproject.org/files/ENCFF178WGW/@@download/ENCFF178WGW.bam GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF019XCK bam alignments ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 50 ENCFF002DHM, ENCFF807MUK 1113793425 ENCODE Processing Pipeline 073e9d0bb61f9448824841d3a048f55e https://www.encodeproject.org/files/ENCFF019XCK/@@download/ENCFF019XCK.bam hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF613ANK bigWig signal p-value ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 ENCFF249FIH, ENCFF513ZBH, ENCFF777FIV 578637151 ENCODE Processing Pipeline 2b1bcd1bf2e894176582dd6ae64b8fe9 https://www.encodeproject.org/files/ENCFF613ANK/@@download/ENCFF613ANK.bigWig hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF749IZH bigWig fold change over control ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 ENCFF249FIH, ENCFF513ZBH, ENCFF777FIV 359849070 ENCODE Processing Pipeline b444a8de26e9c475166093f8d1f3a0a3 https://www.encodeproject.org/files/ENCFF749IZH/@@download/ENCFF749IZH.bigWig hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF887YID bigWig signal p-value ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 ENCFF019XCK, ENCFF513ZBH, ENCFF777FIV 637667768 ENCODE Processing Pipeline 1f8456b0f12ed634e06916284be6a813 https://www.encodeproject.org/files/ENCFF887YID/@@download/ENCFF887YID.bigWig hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF185DQG bigWig fold change over control ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 ENCFF019XCK, ENCFF513ZBH, ENCFF777FIV 557844114 ENCODE Processing Pipeline bf745c556d018e1059ce2719381b4c58 https://www.encodeproject.org/files/ENCFF185DQG/@@download/ENCFF185DQG.bigWig hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF043TMW bigWig signal p-value ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF019XCK, ENCFF249FIH, ENCFF513ZBH, ENCFF777FIV 766601696 ENCODE Processing Pipeline f7451440f46dff9ee35b189f5efec266 https://www.encodeproject.org/files/ENCFF043TMW/@@download/ENCFF043TMW.bigWig hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF636JXY bed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 ENCFF249FIH, ENCFF513ZBH, ENCFF777FIV 4461664 ENCODE Processing Pipeline 0c3f577bd1e330c847c578dcd8a09790 https://www.encodeproject.org/files/ENCFF636JXY/@@download/ENCFF636JXY.bed.gz hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF116EXQ bed narrowPeak optimal idr thresholded peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF304VXR, ENCFF379IZI, ENCFF636JXY 145088 ENCODE Processing Pipeline 54561d7676f209c4accf47a9d8d8dbda https://www.encodeproject.org/files/ENCFF116EXQ/@@download/ENCFF116EXQ.bed.gz hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF304VXR bed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 ENCFF019XCK, ENCFF513ZBH, ENCFF777FIV 5449410 ENCODE Processing Pipeline 7960ea0f8df0aa0ce24f114984592100 https://www.encodeproject.org/files/ENCFF304VXR/@@download/ENCFF304VXR.bed.gz hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF747TKJ bigBed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 ENCFF636JXY 9893491 ENCODE Processing Pipeline 48cfb9c7a1a6cf0797dede1e2d7fd87f https://www.encodeproject.org/files/ENCFF747TKJ/@@download/ENCFF747TKJ.bigBed hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF340PXK bigBed narrowPeak conservative idr thresholded peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF627POZ 305709 ENCODE Processing Pipeline d3b087c771a667222fcd1f520d5019ce https://www.encodeproject.org/files/ENCFF340PXK/@@download/ENCFF340PXK.bigBed hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF379IZI bed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF019XCK, ENCFF249FIH, ENCFF513ZBH, ENCFF777FIV 5601405 ENCODE Processing Pipeline 18fad9dd859591145cdd2b05a1860678 https://www.encodeproject.org/files/ENCFF379IZI/@@download/ENCFF379IZI.bed.gz hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF079HBN bigBed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 ENCFF304VXR 13155544 ENCODE Processing Pipeline 3eafb3122e130c41637ae81544808cc4 https://www.encodeproject.org/files/ENCFF079HBN/@@download/ENCFF079HBN.bigBed hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF529FLT bigWig fold change over control ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF019XCK, ENCFF249FIH, ENCFF513ZBH, ENCFF777FIV 748362824 ENCODE Processing Pipeline deca37d31e865daa91c298bd3873eab5 https://www.encodeproject.org/files/ENCFF529FLT/@@download/ENCFF529FLT.bigWig hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF205MMG bigBed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF379IZI 11174800 ENCODE Processing Pipeline baeb70d0cc5ed198efaaa26459721d33 https://www.encodeproject.org/files/ENCFF205MMG/@@download/ENCFF205MMG.bigBed hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF627POZ bed narrowPeak conservative idr thresholded peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF304VXR, ENCFF379IZI, ENCFF636JXY 120904 ENCODE Processing Pipeline d9d4159d773eb0c2485be4b130402021 https://www.encodeproject.org/files/ENCFF627POZ/@@download/ENCFF627POZ.bed.gz hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF849NUO bigBed narrowPeak optimal idr thresholded peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF116EXQ 346314 ENCODE Processing Pipeline e23920d136591b1243a947ffd355217d https://www.encodeproject.org/files/ENCFF849NUO/@@download/ENCFF849NUO.bigBed hg19 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF840PEJ bigWig signal p-value ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 ENCFF754WTG, ENCFF966AVZ, ENCFF988HVR 574775724 ENCODE Processing Pipeline 8bfd7225685c5a5ebb1fb1fcfe2fa620 https://www.encodeproject.org/files/ENCFF840PEJ/@@download/ENCFF840PEJ.bigWig GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF081KQA bigWig signal p-value ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF178WGW, ENCFF754WTG, ENCFF966AVZ, ENCFF988HVR 783688920 ENCODE Processing Pipeline 80dceb7a7c61132147b31cb308d4cf9b https://www.encodeproject.org/files/ENCFF081KQA/@@download/ENCFF081KQA.bigWig GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF114WTO bigWig signal p-value ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 ENCFF178WGW, ENCFF754WTG, ENCFF966AVZ 649056328 ENCODE Processing Pipeline dff955842dc89ba38ce90fab0b343fc2 https://www.encodeproject.org/files/ENCFF114WTO/@@download/ENCFF114WTO.bigWig GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF497OLG bigWig fold change over control ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 ENCFF754WTG, ENCFF966AVZ, ENCFF988HVR 358816086 ENCODE Processing Pipeline 520f487d0175484ae3b61459586a2fc4 https://www.encodeproject.org/files/ENCFF497OLG/@@download/ENCFF497OLG.bigWig GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF556NUU bigWig fold change over control ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 ENCFF178WGW, ENCFF754WTG, ENCFF966AVZ 562352955 ENCODE Processing Pipeline 8d20024b20d2d3f70748f07779149562 https://www.encodeproject.org/files/ENCFF556NUU/@@download/ENCFF556NUU.bigWig GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF381QHK bigWig fold change over control ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF178WGW, ENCFF754WTG, ENCFF966AVZ, ENCFF988HVR 737207663 ENCODE Processing Pipeline e8b10e7d90f35f73a882a8f4cecc5525 https://www.encodeproject.org/files/ENCFF381QHK/@@download/ENCFF381QHK.bigWig GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF775LYL bed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 ENCFF178WGW, ENCFF754WTG, ENCFF966AVZ 5200828 ENCODE Processing Pipeline 4483d3930e49739e88fec409aed3a231 https://www.encodeproject.org/files/ENCFF775LYL/@@download/ENCFF775LYL.bed.gz GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF281UYF bigBed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 2 ENCFF775LYL 13100369 ENCODE Processing Pipeline 31e18b72088190407fdd77036e564fd5 https://www.encodeproject.org/files/ENCFF281UYF/@@download/ENCFF281UYF.bigBed GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF555KBT bed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF178WGW, ENCFF754WTG, ENCFF966AVZ, ENCFF988HVR 5372102 ENCODE Processing Pipeline 07e978f880df712f66bfb7ab8920c3fa https://www.encodeproject.org/files/ENCFF555KBT/@@download/ENCFF555KBT.bed.gz GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF703XUB bigBed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 ENCFF592GAR 9743013 ENCODE Processing Pipeline 5c2e1b01d0eeb09bd1b0261d5f391a37 https://www.encodeproject.org/files/ENCFF703XUB/@@download/ENCFF703XUB.bigBed GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF592GAR bed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1 ENCFF754WTG, ENCFF966AVZ, ENCFF988HVR 4317789 ENCODE Processing Pipeline e3e147247995b22b47e846c427fd193c https://www.encodeproject.org/files/ENCFF592GAR/@@download/ENCFF592GAR.bed.gz GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF145CKY bigBed narrowPeak optimal idr thresholded peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF946ACA 359545 ENCODE Processing Pipeline 294e251f3771c433105f2d233dc08575 https://www.encodeproject.org/files/ENCFF145CKY/@@download/ENCFF145CKY.bigBed GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF626CRQ bigBed narrowPeak peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF555KBT 11123659 ENCODE Processing Pipeline 0c0e472c6f145e8e60b822f7e3084bf6 https://www.encodeproject.org/files/ENCFF626CRQ/@@download/ENCFF626CRQ.bigBed GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF453CIO bed narrowPeak conservative idr thresholded peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF555KBT, ENCFF592GAR, ENCFF775LYL 122236 ENCODE Processing Pipeline bdde6d54b6812f0f5abaa9045c8f8f61 https://www.encodeproject.org/files/ENCFF453CIO/@@download/ENCFF453CIO.bed.gz GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF782COJ bigBed narrowPeak conservative idr thresholded peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF453CIO 308442 ENCODE Processing Pipeline aef018deea221c4ba72b74a334df735c https://www.encodeproject.org/files/ENCFF782COJ/@@download/ENCFF782COJ.bigBed GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF946ACA bed narrowPeak optimal idr thresholded peaks ENCSR331HPA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens GABPA-human ENCAB000AGR DNA False 2014-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF555KBT, ENCFF592GAR, ENCFF775LYL 153113 ENCODE Processing Pipeline 3eb48d3f5e84af61257eedd43cb78961 https://www.encodeproject.org/files/ENCFF946ACA/@@download/ENCFF946ACA.bed.gz GRCh38 released inconsistent platforms, control low read depth, antibody characterized with exemption, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF039EYW fastq reads ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1361221373 Richard Myers, HAIB 09ea9697110ddbba379b31c55d837b15 SRA:SRR5331161 https://www.encodeproject.org/files/ENCFF039EYW/@@download/ENCFF039EYW.fastq.gz HiSeq 2000 /files/ENCFF123QZN/ released antibody characterized with exemption biological replicates with identical biosample ENCFF888RXZ fastq reads ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1066817761 Richard Myers, HAIB df0baf2aea39b827965f631846225b19 SRA:SRR5331162 https://www.encodeproject.org/files/ENCFF888RXZ/@@download/ENCFF888RXZ.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption biological replicates with identical biosample ENCFF009IDY bam unfiltered alignments ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 50 ENCFF039EYW, ENCFF643CGH 1487257668 ENCODE Processing Pipeline b835d5a620fb497107cdbb0c4a8c9882 https://www.encodeproject.org/files/ENCFF009IDY/@@download/ENCFF009IDY.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF177GCV bam unfiltered alignments ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF888RXZ 1204379591 ENCODE Processing Pipeline a84a7470b529018f29f5bff53050f0d1 https://www.encodeproject.org/files/ENCFF177GCV/@@download/ENCFF177GCV.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF417QDU bam alignments ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF888RXZ 911729109 ENCODE Processing Pipeline 99fd38323ac763769130f46b58fcddfb https://www.encodeproject.org/files/ENCFF417QDU/@@download/ENCFF417QDU.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF632BNR bam alignments ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 50 ENCFF039EYW, ENCFF643CGH 1102668684 ENCODE Processing Pipeline 4f514465c6235a6a8d89b267f313f31c https://www.encodeproject.org/files/ENCFF632BNR/@@download/ENCFF632BNR.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF166KNH bigWig signal p-value ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 ENCFF337WHA, ENCFF610PNU, ENCFF632BNR 872989533 ENCODE Processing Pipeline bec2829cf05faa0ff72db8a305061910 https://www.encodeproject.org/files/ENCFF166KNH/@@download/ENCFF166KNH.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF246WEK bigWig signal p-value ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF337WHA, ENCFF417QDU, ENCFF610PNU, ENCFF632BNR 1134123170 ENCODE Processing Pipeline dcc595fc01a3ff32befdb8e23005a706 https://www.encodeproject.org/files/ENCFF246WEK/@@download/ENCFF246WEK.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF053MGY bigWig fold change over control ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 ENCFF337WHA, ENCFF610PNU, ENCFF632BNR 819075451 ENCODE Processing Pipeline 33307f8a4265b5ae9055cd3bcd279f2d https://www.encodeproject.org/files/ENCFF053MGY/@@download/ENCFF053MGY.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF745YIN bigWig fold change over control ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF337WHA, ENCFF417QDU, ENCFF610PNU, ENCFF632BNR 1134118335 ENCODE Processing Pipeline 5c8051f6133415606b9996f188b7f5a8 https://www.encodeproject.org/files/ENCFF745YIN/@@download/ENCFF745YIN.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF336UMV bigWig signal p-value ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 ENCFF337WHA, ENCFF417QDU, ENCFF610PNU 780900194 ENCODE Processing Pipeline 5aa0d42e1e0ff5c32e6436ac82ac71e3 https://www.encodeproject.org/files/ENCFF336UMV/@@download/ENCFF336UMV.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF438FIR bigWig fold change over control ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 ENCFF337WHA, ENCFF417QDU, ENCFF610PNU 701760847 ENCODE Processing Pipeline d5ad2e60a0b749edb9d908d0acf01ab9 https://www.encodeproject.org/files/ENCFF438FIR/@@download/ENCFF438FIR.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF783YGC bed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF337WHA, ENCFF417QDU, ENCFF610PNU, ENCFF632BNR 6781608 ENCODE Processing Pipeline 93434e2ce7cf856551904850d21ebf5d https://www.encodeproject.org/files/ENCFF783YGC/@@download/ENCFF783YGC.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF462XAK bed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 ENCFF337WHA, ENCFF610PNU, ENCFF632BNR 6357773 ENCODE Processing Pipeline 3838270032b50367a46216d29e53c9ec https://www.encodeproject.org/files/ENCFF462XAK/@@download/ENCFF462XAK.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF285JQX bed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 ENCFF337WHA, ENCFF417QDU, ENCFF610PNU 5878511 ENCODE Processing Pipeline 1ed726c8271ce9da4054ea7d6c340353 https://www.encodeproject.org/files/ENCFF285JQX/@@download/ENCFF285JQX.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF828VVA bigBed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 ENCFF462XAK 13420805 ENCODE Processing Pipeline 87e8abe233922a971198fcc231e5da27 https://www.encodeproject.org/files/ENCFF828VVA/@@download/ENCFF828VVA.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF950JZU bigBed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 ENCFF285JQX 13530717 ENCODE Processing Pipeline 91f6c8a6085d21c5984fd363bca3aff3 https://www.encodeproject.org/files/ENCFF950JZU/@@download/ENCFF950JZU.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF286SHU bigBed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF783YGC 13538333 ENCODE Processing Pipeline bfa23ca932279e8301b9964e743b62d0 https://www.encodeproject.org/files/ENCFF286SHU/@@download/ENCFF286SHU.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF997IFW bed narrowPeak conservative idr thresholded peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF285JQX, ENCFF419RSJ, ENCFF462XAK, ENCFF783YGC 330739 ENCODE Processing Pipeline 6b50e99962c9970d27783249ff8b35e8 https://www.encodeproject.org/files/ENCFF997IFW/@@download/ENCFF997IFW.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF404OXL bigBed narrowPeak optimal idr thresholded peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF280YAF 790085 ENCODE Processing Pipeline 0f064d7fbd38caa9acd825aadac5ad79 https://www.encodeproject.org/files/ENCFF404OXL/@@download/ENCFF404OXL.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF240YJO bigBed narrowPeak conservative idr thresholded peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF997IFW 720287 ENCODE Processing Pipeline 88a87a2e8dd8b24eb1a5435f364767ce https://www.encodeproject.org/files/ENCFF240YJO/@@download/ENCFF240YJO.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF280YAF bed narrowPeak optimal idr thresholded peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF285JQX, ENCFF419RSJ, ENCFF462XAK, ENCFF783YGC 374538 ENCODE Processing Pipeline 13a46712fa63158110b4c61ac46a2e30 https://www.encodeproject.org/files/ENCFF280YAF/@@download/ENCFF280YAF.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF224EXH bam unfiltered alignments ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF888RXZ 1197933624 ENCODE Processing Pipeline 5b14b3bd882647d2f2c5d7f30749df38 https://www.encodeproject.org/files/ENCFF224EXH/@@download/ENCFF224EXH.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF432HQR bam alignments ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF888RXZ 911681757 ENCODE Processing Pipeline beac418c938d7f76e973fe591858154d https://www.encodeproject.org/files/ENCFF432HQR/@@download/ENCFF432HQR.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF274NHB bam alignments ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 50 ENCFF039EYW, ENCFF807MUK 1102592311 ENCODE Processing Pipeline ff4bdb98674501b27ed6408eee98508a https://www.encodeproject.org/files/ENCFF274NHB/@@download/ENCFF274NHB.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF747XZN bam unfiltered alignments ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 50 ENCFF039EYW, ENCFF807MUK 1479719915 ENCODE Processing Pipeline 7b60591133bd1d7362c203265b1049e3 https://www.encodeproject.org/files/ENCFF747XZN/@@download/ENCFF747XZN.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF982ORD bigWig signal p-value ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 ENCFF200LFK, ENCFF321UJV, ENCFF432HQR 818993787 ENCODE Processing Pipeline ec92d15c971798bc18a3c0120c91f2f1 https://www.encodeproject.org/files/ENCFF982ORD/@@download/ENCFF982ORD.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF972RHW bigWig signal p-value ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 ENCFF200LFK, ENCFF274NHB, ENCFF321UJV 895916808 ENCODE Processing Pipeline 3cb1a3d41cae05de5e4f9b498b5cafb3 https://www.encodeproject.org/files/ENCFF972RHW/@@download/ENCFF972RHW.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF348DKK bigWig signal p-value ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF200LFK, ENCFF274NHB, ENCFF321UJV, ENCFF432HQR 1081602667 ENCODE Processing Pipeline ece83c484a98c1e72ee5f352d4919903 https://www.encodeproject.org/files/ENCFF348DKK/@@download/ENCFF348DKK.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF979KJL bigWig fold change over control ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 ENCFF200LFK, ENCFF321UJV, ENCFF432HQR 694141921 ENCODE Processing Pipeline 6379df15d2672acd5658b93e01ec568c https://www.encodeproject.org/files/ENCFF979KJL/@@download/ENCFF979KJL.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF085LGD bigWig fold change over control ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF200LFK, ENCFF274NHB, ENCFF321UJV, ENCFF432HQR 1133496009 ENCODE Processing Pipeline cd3649b489e385f28ce6244b83edfe08 https://www.encodeproject.org/files/ENCFF085LGD/@@download/ENCFF085LGD.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF732GQK bigWig fold change over control ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 ENCFF200LFK, ENCFF274NHB, ENCFF321UJV 812655729 ENCODE Processing Pipeline 843c5c54fef07aa90373913de13701b4 https://www.encodeproject.org/files/ENCFF732GQK/@@download/ENCFF732GQK.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF045GWC bed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 ENCFF200LFK, ENCFF321UJV, ENCFF432HQR 5893336 ENCODE Processing Pipeline bcfd36c5f953f44313654a6c3757e8b7 https://www.encodeproject.org/files/ENCFF045GWC/@@download/ENCFF045GWC.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF928ABW bigBed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 2 ENCFF045GWC 13536965 ENCODE Processing Pipeline 05fb7ac6fb3e90ee75a5de2c2a84760e https://www.encodeproject.org/files/ENCFF928ABW/@@download/ENCFF928ABW.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF634EKL bed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 ENCFF200LFK, ENCFF274NHB, ENCFF321UJV 6358957 ENCODE Processing Pipeline 73c23b4202dccbc449bc25713a56cbd7 https://www.encodeproject.org/files/ENCFF634EKL/@@download/ENCFF634EKL.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF957WCX bed narrowPeak conservative idr thresholded peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF045GWC, ENCFF556UZM, ENCFF634EKL 329492 ENCODE Processing Pipeline b5e942e671b03f1fdf44bf8178ff51df https://www.encodeproject.org/files/ENCFF957WCX/@@download/ENCFF957WCX.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF556UZM bed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF200LFK, ENCFF274NHB, ENCFF321UJV, ENCFF432HQR 6779898 ENCODE Processing Pipeline 6372b0be6b3fb7b14154739e92a81609 https://www.encodeproject.org/files/ENCFF556UZM/@@download/ENCFF556UZM.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF743SGB bigBed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1 ENCFF634EKL 13409602 ENCODE Processing Pipeline b6636d614af9aed2ba40fb97a88a91e6 https://www.encodeproject.org/files/ENCFF743SGB/@@download/ENCFF743SGB.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF025XSA bigBed narrowPeak optimal idr thresholded peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF258PIW 779990 ENCODE Processing Pipeline 7b729cab5e331374be8048a27f753912 https://www.encodeproject.org/files/ENCFF025XSA/@@download/ENCFF025XSA.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF400IEC bigBed narrowPeak conservative idr thresholded peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF957WCX 716144 ENCODE Processing Pipeline be8f396dcf5d3f886ea7bc509964a25f https://www.encodeproject.org/files/ENCFF400IEC/@@download/ENCFF400IEC.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF258PIW bed narrowPeak optimal idr thresholded peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF045GWC, ENCFF556UZM, ENCFF634EKL 369257 ENCODE Processing Pipeline 95e75578d1c167b5e7e081f192c5011b https://www.encodeproject.org/files/ENCFF258PIW/@@download/ENCFF258PIW.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF763PBY bigBed narrowPeak peaks ENCSR038GMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens GABPA-human ENCAB000AGR DNA False 2016-06-30 ENCODE 1, 2 ENCFF556UZM 13528929 ENCODE Processing Pipeline 1127324a2a4492ac82e794edbaa29d13 https://www.encodeproject.org/files/ENCFF763PBY/@@download/ENCFF763PBY.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF000PPR bam alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PQJ 2210144645 Richard Myers, HAIB eec168d7ca3b17e18d29bf495209d554 https://www.encodeproject.org/files/ENCFF000PPR/@@download/ENCFF000PPR.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPS bigBed broadPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHM 1002182 Richard Myers, HAIB a01255807e9388f6b25ebd17f11cdbfa https://www.encodeproject.org/files/ENCFF000PPS/@@download/ENCFF000PPS.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPT bigBed broadPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHN 286185 Richard Myers, HAIB 2d7cf1acc9c581c31de4e8d91a4523c0 https://www.encodeproject.org/files/ENCFF000PPT/@@download/ENCFF000PPT.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPU bam alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PQE 1108308418 Richard Myers, HAIB 002e6171fab101a51686f733721fd8d2 https://www.encodeproject.org/files/ENCFF000PPU/@@download/ENCFF000PPU.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PPV bigWig raw signal ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 46029174 Richard Myers, HAIB b65b5363f70cfe251a58ce01d4e40ba9 https://www.encodeproject.org/files/ENCFF000PPV/@@download/ENCFF000PPV.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000PPX bigWig raw signal ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 8366029 Richard Myers, HAIB 842d5fbd75e75907e5b8fedd5985cc5e https://www.encodeproject.org/files/ENCFF000PPX/@@download/ENCFF000PPX.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000PQE fastq reads ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 731212319 Richard Myers, HAIB cba6aefc1d63d1dc2505b60b66c42029 https://www.encodeproject.org/files/ENCFF000PQE/@@download/ENCFF000PQE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POH/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000PQJ fastq reads ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1625137849 Richard Myers, HAIB e01b5095e13a0c39c598062ea4564f08 https://www.encodeproject.org/files/ENCFF000PQJ/@@download/ENCFF000PQJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF001UHM bed broadPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 524230 Richard Myers, HAIB a53fe67497ebdc7e68f5db9ace68778a https://www.encodeproject.org/files/ENCFF001UHM/@@download/ENCFF001UHM.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF001UHN bed broadPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 111968 Richard Myers, HAIB 5df5f253dcaf663868b794226ee50a48 https://www.encodeproject.org/files/ENCFF001UHN/@@download/ENCFF001UHN.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF002CLB bed narrowPeak optimal idr thresholded peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 623335 ENCODE Consortium Analysis Working Group 376cdc1b9880f92085b220e94c996ae8 https://www.encodeproject.org/files/ENCFF002CLB/@@download/ENCFF002CLB.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF952JQP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE ENCFF002CLB 1404328 ENCODE Consortium 229825460bb29b5934cf77e12f4c61a1 https://www.encodeproject.org/files/ENCFF952JQP/@@download/ENCFF952JQP.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF449IUJ bam alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PQE, ENCFF643CGH 540733347 ENCODE Processing Pipeline d38238759c8aaa259ebc5cde2e0776b4 https://www.encodeproject.org/files/ENCFF449IUJ/@@download/ENCFF449IUJ.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF919ZCW bam unfiltered alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PQE, ENCFF643CGH 946091884 ENCODE Processing Pipeline 7bd3a7353af62849aee09f143a72ada4 https://www.encodeproject.org/files/ENCFF919ZCW/@@download/ENCFF919ZCW.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF850TET bam alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PQJ, ENCFF643CGH 1282865743 ENCODE Processing Pipeline fccb64867ab79e5f3d5303b1f85b130a https://www.encodeproject.org/files/ENCFF850TET/@@download/ENCFF850TET.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF848KLH bam unfiltered alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PQJ, ENCFF643CGH 2135898657 ENCODE Processing Pipeline df7c7951050a71a477240db125d328fd https://www.encodeproject.org/files/ENCFF848KLH/@@download/ENCFF848KLH.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF269GKC bam unfiltered alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PQE, ENCFF807MUK 942364469 ENCODE Processing Pipeline aa8e0d7923f9a7e1016ac0347e792978 https://www.encodeproject.org/files/ENCFF269GKC/@@download/ENCFF269GKC.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF635IBY bam alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PQE, ENCFF807MUK 541087843 ENCODE Processing Pipeline 78f8d33313ae4b6816b3bf7222b08a0f https://www.encodeproject.org/files/ENCFF635IBY/@@download/ENCFF635IBY.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF417XUU bam alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PQJ, ENCFF807MUK 1283408178 ENCODE Processing Pipeline 96ac535e7110c3bb9b9b1e3dd8b6986c https://www.encodeproject.org/files/ENCFF417XUU/@@download/ENCFF417XUU.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF933SQQ bam unfiltered alignments ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PQJ, ENCFF807MUK 2126865716 ENCODE Processing Pipeline e6c43c7cd443637604a5b5fadea2bdb7 https://www.encodeproject.org/files/ENCFF933SQQ/@@download/ENCFF933SQQ.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF614MWS bigWig signal p-value ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF850TET 645833126 ENCODE Processing Pipeline d4dc0b95c50fb7e25035e7520a46d617 https://www.encodeproject.org/files/ENCFF614MWS/@@download/ENCFF614MWS.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF323LTB bigWig signal p-value ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF449IUJ 591993213 ENCODE Processing Pipeline f57abcedc83ea96ffe8fbb2ad4b7a23a https://www.encodeproject.org/files/ENCFF323LTB/@@download/ENCFF323LTB.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF239YXQ bigWig signal p-value ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF449IUJ, ENCFF850TET 828539745 ENCODE Processing Pipeline c91d03c19f0369963003215eb8ff753c https://www.encodeproject.org/files/ENCFF239YXQ/@@download/ENCFF239YXQ.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF537QIE bigWig fold change over control ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF449IUJ, ENCFF850TET 800661869 ENCODE Processing Pipeline 2596788fb2091e93d75b8315e5819f12 https://www.encodeproject.org/files/ENCFF537QIE/@@download/ENCFF537QIE.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF242PEU bed narrowPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF850TET 5694824 ENCODE Processing Pipeline 0c16efb70da540120fbe92f02fb243ad https://www.encodeproject.org/files/ENCFF242PEU/@@download/ENCFF242PEU.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF748AUC bigWig fold change over control ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF850TET 634124511 ENCODE Processing Pipeline b1afe9a2dc4d12f561d9cbb51967eac5 https://www.encodeproject.org/files/ENCFF748AUC/@@download/ENCFF748AUC.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF156TSI bigBed narrowPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105XMS 13701397 ENCODE Processing Pipeline 694673174b346dfb575d377b22514b76 https://www.encodeproject.org/files/ENCFF156TSI/@@download/ENCFF156TSI.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF063EMI bigWig fold change over control ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF449IUJ 338354790 ENCODE Processing Pipeline 8c674cafe640fb28dfff3fe5118946be https://www.encodeproject.org/files/ENCFF063EMI/@@download/ENCFF063EMI.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF338WLU bigBed narrowPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF242PEU 11288330 ENCODE Processing Pipeline 1cdabf5f372b0bde4823e75cbf4039ca https://www.encodeproject.org/files/ENCFF338WLU/@@download/ENCFF338WLU.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF635UNX bed narrowPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF449IUJ 3843269 ENCODE Processing Pipeline 8e954b63e3fa6e8bc1cd11c503609e5b https://www.encodeproject.org/files/ENCFF635UNX/@@download/ENCFF635UNX.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF105XMS bed narrowPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF449IUJ, ENCFF850TET 6139798 ENCODE Processing Pipeline 27ac7efac3783424180c9354a9a65ec2 https://www.encodeproject.org/files/ENCFF105XMS/@@download/ENCFF105XMS.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF154UXU bigBed narrowPeak peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF635UNX 8444477 ENCODE Processing Pipeline 691e385d09f1cf02b37e2ea2b6989b2b https://www.encodeproject.org/files/ENCFF154UXU/@@download/ENCFF154UXU.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF175VXL bed narrowPeak optimal idr thresholded peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105XMS, ENCFF242PEU, ENCFF419RSJ, ENCFF635UNX 601282 ENCODE Processing Pipeline 7d80ea291ece233a5f075aa389ae04c0 https://www.encodeproject.org/files/ENCFF175VXL/@@download/ENCFF175VXL.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF013MUF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF636ARM 129177 ENCODE Processing Pipeline b82bd757d9232a9470f588246f31c3cf https://www.encodeproject.org/files/ENCFF013MUF/@@download/ENCFF013MUF.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF636ARM bed narrowPeak conservative idr thresholded peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105XMS, ENCFF242PEU, ENCFF419RSJ, ENCFF635UNX 38501 ENCODE Processing Pipeline ba9d5210708ca17ac06662fd03d315a9 https://www.encodeproject.org/files/ENCFF636ARM/@@download/ENCFF636ARM.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF050BFU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF175VXL 1191013 ENCODE Processing Pipeline 214ef36ac65d9ca8969bb05bd1d72b5d https://www.encodeproject.org/files/ENCFF050BFU/@@download/ENCFF050BFU.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000OLN bam alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OMD 1001354789 Richard Myers, HAIB 838933b344be2ee6f0f182d4b21884f4 https://www.encodeproject.org/files/ENCFF000OLN/@@download/ENCFF000OLN.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OLO bam alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OLZ 766388794 Richard Myers, HAIB 35fc901ec8e8d3333a5c20d10e7b2f51 https://www.encodeproject.org/files/ENCFF000OLO/@@download/ENCFF000OLO.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OLP bigBed broadPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAO 409430 Richard Myers, HAIB 5f0ecd881bbca29bd31d83750417a645 https://www.encodeproject.org/files/ENCFF000OLP/@@download/ENCFF000OLP.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OLQ bigBed broadPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAP 177872 Richard Myers, HAIB 8fcabf13f550ebbf93141abc127ee4a3 https://www.encodeproject.org/files/ENCFF000OLQ/@@download/ENCFF000OLQ.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OLT bigWig raw signal ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 20971671 Richard Myers, HAIB 3d8f3bd8f6d884714a3f450034eff33d https://www.encodeproject.org/files/ENCFF000OLT/@@download/ENCFF000OLT.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OLU bigWig raw signal ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 11788469 Richard Myers, HAIB ea793ccfc9eab8a774e469f8252fea90 https://www.encodeproject.org/files/ENCFF000OLU/@@download/ENCFF000OLU.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OLZ fastq reads ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 786692980 Richard Myers, HAIB b455977b9f6b80fc6eaadf0cdc2c6041 https://www.encodeproject.org/files/ENCFF000OLZ/@@download/ENCFF000OLZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLW/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OMD fastq reads ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1476513400 Richard Myers, HAIB 6801d78b9d69b69742991d3ff946e6bd https://www.encodeproject.org/files/ENCFF000OMD/@@download/ENCFF000OMD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLW/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UAO bed broadPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 194087 Richard Myers, HAIB dfb29bdfc67ca59a148d6780f90c6dcf https://www.encodeproject.org/files/ENCFF001UAO/@@download/ENCFF001UAO.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UAP bed broadPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 82920 Richard Myers, HAIB e496d54e4f7557297158e7387ce586cd https://www.encodeproject.org/files/ENCFF001UAP/@@download/ENCFF001UAP.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CIP bed narrowPeak optimal idr thresholded peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 210664 ENCODE Consortium Analysis Working Group c5eac5902cb7db64edab571c0e42a3b1 https://www.encodeproject.org/files/ENCFF002CIP/@@download/ENCFF002CIP.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF258DTS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE ENCFF002CIP 504659 ENCODE Consortium da1cf945bf9368d3f1f8d6ffb1d9be42 https://www.encodeproject.org/files/ENCFF258DTS/@@download/ENCFF258DTS.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF083XSA bam unfiltered alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLZ, ENCFF643CGH 1043947231 ENCODE Processing Pipeline 087a387bc13ff55981a9d45254919622 https://www.encodeproject.org/files/ENCFF083XSA/@@download/ENCFF083XSA.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF114FFY bam alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLZ, ENCFF643CGH 618092597 ENCODE Processing Pipeline 2bd7ca27fb523e73bb9fdd398e4d3a3e https://www.encodeproject.org/files/ENCFF114FFY/@@download/ENCFF114FFY.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF583AOA bam unfiltered alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMD, ENCFF643CGH 1775622220 ENCODE Processing Pipeline 698deeb4ba525d626e377ae61caecbba https://www.encodeproject.org/files/ENCFF583AOA/@@download/ENCFF583AOA.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF863AIR bam alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMD, ENCFF643CGH 683030467 ENCODE Processing Pipeline 222a3c4c5b1136cde9817839a12c8a00 https://www.encodeproject.org/files/ENCFF863AIR/@@download/ENCFF863AIR.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF332YOH bam unfiltered alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLZ, ENCFF807MUK 1039060573 ENCODE Processing Pipeline 775ea03ccc45fe8c3a08043896d285b4 https://www.encodeproject.org/files/ENCFF332YOH/@@download/ENCFF332YOH.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF630WRV bam alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLZ, ENCFF807MUK 613313326 ENCODE Processing Pipeline a0d99c2438e6fb9da877f46b82fcc81b https://www.encodeproject.org/files/ENCFF630WRV/@@download/ENCFF630WRV.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF643XHX bam unfiltered alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMD, ENCFF807MUK 1769956840 ENCODE Processing Pipeline eb685d35d51896009a35839acc79d12e https://www.encodeproject.org/files/ENCFF643XHX/@@download/ENCFF643XHX.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF338LXS bam alignments ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMD, ENCFF807MUK 677454903 ENCODE Processing Pipeline 09e6803e6688e2bb8c410f0ecd0c3605 https://www.encodeproject.org/files/ENCFF338LXS/@@download/ENCFF338LXS.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF832YYE bigWig signal p-value ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF114FFY, ENCFF860NWP 363504979 ENCODE Processing Pipeline 666f1ec134e700b3c474ac38071a1eaf https://www.encodeproject.org/files/ENCFF832YYE/@@download/ENCFF832YYE.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF171VIK bigWig fold change over control ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF114FFY, ENCFF860NWP 241942290 ENCODE Processing Pipeline 2a0b24568e46942818e9dd848e0d6160 https://www.encodeproject.org/files/ENCFF171VIK/@@download/ENCFF171VIK.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF307XCZ bigWig fold change over control ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF114FFY, ENCFF860NWP, ENCFF863AIR 420941242 ENCODE Processing Pipeline 53430b92c982b556da08f8ebc5037012 https://www.encodeproject.org/files/ENCFF307XCZ/@@download/ENCFF307XCZ.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF621KOX bigWig signal p-value ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF114FFY, ENCFF860NWP, ENCFF863AIR 289243798 ENCODE Processing Pipeline 184416b9c1c698fefccc6a6c1a30ecf2 https://www.encodeproject.org/files/ENCFF621KOX/@@download/ENCFF621KOX.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF092SMY bigWig signal p-value ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF860NWP, ENCFF863AIR 290114454 ENCODE Processing Pipeline be2f2ba616f71f01e7d90c1f1a62b9a7 https://www.encodeproject.org/files/ENCFF092SMY/@@download/ENCFF092SMY.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF359FWS bigWig fold change over control ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF860NWP, ENCFF863AIR 230510764 ENCODE Processing Pipeline 1e81715b6e11d1223f72e2a1c1489031 https://www.encodeproject.org/files/ENCFF359FWS/@@download/ENCFF359FWS.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF376KOL bed narrowPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF860NWP, ENCFF863AIR 4166065 ENCODE Processing Pipeline d766f08e912a9aefd9c97be2a95216c9 https://www.encodeproject.org/files/ENCFF376KOL/@@download/ENCFF376KOL.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF033PLJ bed narrowPeak optimal idr thresholded peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF269QOX, ENCFF376KOL, ENCFF419RSJ, ENCFF421VMO 215503 ENCODE Processing Pipeline 91532feedf706120ac26bf6e96f46c04 https://www.encodeproject.org/files/ENCFF033PLJ/@@download/ENCFF033PLJ.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF030FGV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF033PLJ 423773 ENCODE Processing Pipeline 69accd742d79cc7c0dd86fa6f75408bd https://www.encodeproject.org/files/ENCFF030FGV/@@download/ENCFF030FGV.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF269QOX bed narrowPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF114FFY, ENCFF860NWP 4105186 ENCODE Processing Pipeline 117c95ebc3ba12143b636cc9add67db4 https://www.encodeproject.org/files/ENCFF269QOX/@@download/ENCFF269QOX.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF421VMO bed narrowPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF114FFY, ENCFF860NWP, ENCFF863AIR 4653343 ENCODE Processing Pipeline 576bda3745fbcc92af3f838d618ecb38 https://www.encodeproject.org/files/ENCFF421VMO/@@download/ENCFF421VMO.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF529TAB bigBed narrowPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF376KOL 10167815 ENCODE Processing Pipeline b8979ae2011c0a60ef2e1c4f69bfd134 https://www.encodeproject.org/files/ENCFF529TAB/@@download/ENCFF529TAB.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF834NTF bigBed narrowPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF269QOX 10243398 ENCODE Processing Pipeline 68183bc55a8474693abc6f30d8fa7ea7 https://www.encodeproject.org/files/ENCFF834NTF/@@download/ENCFF834NTF.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF428FML bigBed narrowPeak peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF421VMO 10899946 ENCODE Processing Pipeline 22a04def61e5bf4a62376dad5d01b31f https://www.encodeproject.org/files/ENCFF428FML/@@download/ENCFF428FML.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF072YVF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF893SZU 389547 ENCODE Processing Pipeline e67a0749cc2987710239605b9635616a https://www.encodeproject.org/files/ENCFF072YVF/@@download/ENCFF072YVF.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF893SZU bed narrowPeak conservative idr thresholded peaks ENCSR000BIB ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF269QOX, ENCFF376KOL, ENCFF419RSJ, ENCFF421VMO 191372 ENCODE Processing Pipeline 4e67ae5bf152b7771bca2df0af5c39c0 https://www.encodeproject.org/files/ENCFF893SZU/@@download/ENCFF893SZU.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PVE bigBed broadPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UIU 745171 Richard Myers, HAIB 9b44bbfa5e4a4903263e8aa2766f82ef https://www.encodeproject.org/files/ENCFF000PVE/@@download/ENCFF000PVE.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PVF bigBed broadPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UIV 654299 Richard Myers, HAIB 70d041270249c5528fe710c481eaf260 https://www.encodeproject.org/files/ENCFF000PVF/@@download/ENCFF000PVF.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PVG bam alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PVK 649578891 Richard Myers, HAIB 7b53fc9f60481d34b344e149372e920c https://www.encodeproject.org/files/ENCFF000PVG/@@download/ENCFF000PVG.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PVH bam alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PVP 1664921751 Richard Myers, HAIB aedc3184a53c80017c2fcd623cb87e5e https://www.encodeproject.org/files/ENCFF000PVH/@@download/ENCFF000PVH.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PVI bigWig raw signal ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 1 19130425 Richard Myers, HAIB fb563205741c2d257413d9a4cccddfde https://www.encodeproject.org/files/ENCFF000PVI/@@download/ENCFF000PVI.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PVJ bigWig raw signal ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 1 41701073 Richard Myers, HAIB 90819d01b4f5f7614a2b80492d0028e4 https://www.encodeproject.org/files/ENCFF000PVJ/@@download/ENCFF000PVJ.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PVK fastq reads ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 631108244 Richard Myers, HAIB 66aa1e34163c988205b677659fccda24 https://www.encodeproject.org/files/ENCFF000PVK/@@download/ENCFF000PVK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PVT/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PVP fastq reads ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1648674523 Richard Myers, HAIB 241a1ef2f8c789a91f2cf5c4d75b0c55 https://www.encodeproject.org/files/ENCFF000PVP/@@download/ENCFF000PVP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PVT/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UIU bed broadPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 1 388043 Richard Myers, HAIB 79cb51019b7abb752a796efb2059d396 https://www.encodeproject.org/files/ENCFF001UIU/@@download/ENCFF001UIU.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UIV bed broadPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 1 359980 Richard Myers, HAIB 8ce4c0a4a0af2641815187c488fff2ba https://www.encodeproject.org/files/ENCFF001UIV/@@download/ENCFF001UIV.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CLM bed narrowPeak optimal idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 416360 ENCODE Consortium Analysis Working Group f781dd9a868d691299bcc5c5009c691b https://www.encodeproject.org/files/ENCFF002CLM/@@download/ENCFF002CLM.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF141SDE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE ENCFF002CLM 1111177 ENCODE Consortium 791573f833d1bd3c14ce61f09989317a https://www.encodeproject.org/files/ENCFF141SDE/@@download/ENCFF141SDE.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF896AXB bam alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PVK, ENCFF643CGH 465533379 ENCODE Processing Pipeline 5db78ec69b91c308242b4c93eb00b2f0 https://www.encodeproject.org/files/ENCFF896AXB/@@download/ENCFF896AXB.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF692VEL bam unfiltered alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PVK, ENCFF643CGH 793661675 ENCODE Processing Pipeline 468bf67808ce5996fbdccce0ff656a55 https://www.encodeproject.org/files/ENCFF692VEL/@@download/ENCFF692VEL.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF224KDN bam unfiltered alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PVP, ENCFF643CGH 1811000164 ENCODE Processing Pipeline a6b4d7b461a9573051870f639585e24b https://www.encodeproject.org/files/ENCFF224KDN/@@download/ENCFF224KDN.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF571VGS bam alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PVP, ENCFF643CGH 1192093443 ENCODE Processing Pipeline 3cbdbd6e426a456d620f4e620be57131 https://www.encodeproject.org/files/ENCFF571VGS/@@download/ENCFF571VGS.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF146JAB bam unfiltered alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PVK, ENCFF807MUK 792707591 ENCODE Processing Pipeline 9c04c23b7f242a07ac8c5be75d52262c https://www.encodeproject.org/files/ENCFF146JAB/@@download/ENCFF146JAB.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF095RWQ bam alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PVK, ENCFF807MUK 465573513 ENCODE Processing Pipeline dd7ff5f81c2983813c6787d889a56f28 https://www.encodeproject.org/files/ENCFF095RWQ/@@download/ENCFF095RWQ.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF942KQL bam unfiltered alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PVP, ENCFF807MUK 1807816023 ENCODE Processing Pipeline 6415a83b2037f5619f50cc02e233064c https://www.encodeproject.org/files/ENCFF942KQL/@@download/ENCFF942KQL.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF089QXR bam alignments ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PVP, ENCFF807MUK 1191932553 ENCODE Processing Pipeline deec354e9c65f4ee1184f465ab3f10e8 https://www.encodeproject.org/files/ENCFF089QXR/@@download/ENCFF089QXR.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF909AQK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF082NLH 990428 ENCODE Processing Pipeline 70dea097200c876f652a39e37229f98d https://www.encodeproject.org/files/ENCFF909AQK/@@download/ENCFF909AQK.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF636DMA bigWig signal p-value ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF095RWQ, ENCFF234MAA 256587554 ENCODE Processing Pipeline 7130704bb1bcd8b2e08f86d8d637497e https://www.encodeproject.org/files/ENCFF636DMA/@@download/ENCFF636DMA.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF610EUL bigWig fold change over control ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF095RWQ, ENCFF234MAA 181774610 ENCODE Processing Pipeline ae0290d9f83d8935f3d3ac5760b98815 https://www.encodeproject.org/files/ENCFF610EUL/@@download/ENCFF610EUL.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF774VSC bigWig signal p-value ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF089QXR, ENCFF234MAA 300511848 ENCODE Processing Pipeline 4402ceabf18c85a4a7d3c8b4b5eb7fa6 https://www.encodeproject.org/files/ENCFF774VSC/@@download/ENCFF774VSC.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF704JVW bed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF089QXR, ENCFF234MAA 6504853 ENCODE Processing Pipeline b407c5599965ac2ceab7fce2ba9086db https://www.encodeproject.org/files/ENCFF704JVW/@@download/ENCFF704JVW.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF143HDP bigBed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF510UHF 12522595 ENCODE Processing Pipeline 98c9bbc2d40d1c93dc52da4855d11f3e https://www.encodeproject.org/files/ENCFF143HDP/@@download/ENCFF143HDP.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF082NLH bed narrowPeak conservative idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF297ZIE, ENCFF510UHF, ENCFF704JVW 423008 ENCODE Processing Pipeline 9f23bb76aec2a77aaa361c67c1f93159 https://www.encodeproject.org/files/ENCFF082NLH/@@download/ENCFF082NLH.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF768HRH bigWig fold change over control ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF089QXR, ENCFF095RWQ, ENCFF234MAA 544055150 ENCODE Processing Pipeline 1d29ffb703448d3d62afde6462095aa9 https://www.encodeproject.org/files/ENCFF768HRH/@@download/ENCFF768HRH.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF954UNK bigBed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF297ZIE 12188270 ENCODE Processing Pipeline 242fe4091ec3b95829ae120e43e0d605 https://www.encodeproject.org/files/ENCFF954UNK/@@download/ENCFF954UNK.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF628OGY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF876VZQ 1130022 ENCODE Processing Pipeline b19e38c51ee2f6fe08b16a10888498fa https://www.encodeproject.org/files/ENCFF628OGY/@@download/ENCFF628OGY.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF681MMD bigWig signal p-value ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF089QXR, ENCFF095RWQ, ENCFF234MAA 278275734 ENCODE Processing Pipeline 8bffce2dc2568d2148b462f876e2f17a https://www.encodeproject.org/files/ENCFF681MMD/@@download/ENCFF681MMD.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF423ZWY bigWig fold change over control ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF089QXR, ENCFF234MAA 455268879 ENCODE Processing Pipeline 473a5186989e9ed57adb5a8ed5aa3716 https://www.encodeproject.org/files/ENCFF423ZWY/@@download/ENCFF423ZWY.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF297ZIE bed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF095RWQ, ENCFF234MAA 5357565 ENCODE Processing Pipeline 9b20dfb24dee94dbd714fca7f7b103d1 https://www.encodeproject.org/files/ENCFF297ZIE/@@download/ENCFF297ZIE.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF510UHF bed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF089QXR, ENCFF095RWQ, ENCFF234MAA 6721534 ENCODE Processing Pipeline 31a75333679d3806751d381b31db545a https://www.encodeproject.org/files/ENCFF510UHF/@@download/ENCFF510UHF.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF859BUG bigBed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF704JVW 12641240 ENCODE Processing Pipeline 565352b221bade538f3458719ad92c09 https://www.encodeproject.org/files/ENCFF859BUG/@@download/ENCFF859BUG.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF876VZQ bed narrowPeak optimal idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF297ZIE, ENCFF510UHF, ENCFF704JVW 503748 ENCODE Processing Pipeline 701ca68b5efae47fa8d14458cd27fdf3 https://www.encodeproject.org/files/ENCFF876VZQ/@@download/ENCFF876VZQ.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF138ANH bigWig fold change over control ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF166HHP, ENCFF896AXB 181373983 ENCODE Processing Pipeline 1fa1556b93abb158c6c1c29f94c8a918 https://www.encodeproject.org/files/ENCFF138ANH/@@download/ENCFF138ANH.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF166KIG bigWig fold change over control ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF166HHP, ENCFF571VGS, ENCFF896AXB 541954228 ENCODE Processing Pipeline 2fc3f5deccc32179a0cf9d3a3e0868a2 https://www.encodeproject.org/files/ENCFF166KIG/@@download/ENCFF166KIG.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF791OTS bed narrowPeak conservative idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF024IBB, ENCFF138NNW, ENCFF419RSJ, ENCFF482VYS 424148 ENCODE Processing Pipeline 047cad38c38737ac01b5cf01be26700c https://www.encodeproject.org/files/ENCFF791OTS/@@download/ENCFF791OTS.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF055PUJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF387VGY 1146251 ENCODE Processing Pipeline 6c5625b722459d6b4beb880a74a63557 https://www.encodeproject.org/files/ENCFF055PUJ/@@download/ENCFF055PUJ.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF677NVH bigWig signal p-value ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF166HHP, ENCFF571VGS, ENCFF896AXB 278255169 ENCODE Processing Pipeline b5f58008fb205ac6bcb1273e21268efc https://www.encodeproject.org/files/ENCFF677NVH/@@download/ENCFF677NVH.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF171AMQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF791OTS 992590 ENCODE Processing Pipeline 8cc452d7c47b1607658ddcb03cee5a42 https://www.encodeproject.org/files/ENCFF171AMQ/@@download/ENCFF171AMQ.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF387VGY bed narrowPeak optimal idr thresholded peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF024IBB, ENCFF138NNW, ENCFF419RSJ, ENCFF482VYS 512541 ENCODE Processing Pipeline 9de86a057533eb09074c6cda76725ddf https://www.encodeproject.org/files/ENCFF387VGY/@@download/ENCFF387VGY.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF024IBB bed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF166HHP, ENCFF896AXB 5345449 ENCODE Processing Pipeline e369a44096d9b4a18d9dbd87909c39a9 https://www.encodeproject.org/files/ENCFF024IBB/@@download/ENCFF024IBB.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF186IYS bigBed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF482VYS 12644989 ENCODE Processing Pipeline c8e3450fdff43b16f2844b42bd21b4a8 https://www.encodeproject.org/files/ENCFF186IYS/@@download/ENCFF186IYS.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF246TSI bigBed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF138NNW 12522822 ENCODE Processing Pipeline 45d26c7fef7cf855319268e75a80cf97 https://www.encodeproject.org/files/ENCFF246TSI/@@download/ENCFF246TSI.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF448OLG bigWig signal p-value ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF166HHP, ENCFF896AXB 286008086 ENCODE Processing Pipeline ad51f0f1f9d5e0fc0303a0bedc92560a https://www.encodeproject.org/files/ENCFF448OLG/@@download/ENCFF448OLG.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF459TKR bigWig signal p-value ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF166HHP, ENCFF571VGS 301380118 ENCODE Processing Pipeline 1d723bce4f7d10a8c5d622a2a10fb2c1 https://www.encodeproject.org/files/ENCFF459TKR/@@download/ENCFF459TKR.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF035RNG bigWig fold change over control ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF166HHP, ENCFF571VGS 456251463 ENCODE Processing Pipeline 6ae6ddd1ce4a455291c99867b44b5cc7 https://www.encodeproject.org/files/ENCFF035RNG/@@download/ENCFF035RNG.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF482VYS bed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF166HHP, ENCFF571VGS 6509652 ENCODE Processing Pipeline cc9b645a23d1c0bb5e412a1306bb3843 https://www.encodeproject.org/files/ENCFF482VYS/@@download/ENCFF482VYS.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF138NNW bed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF166HHP, ENCFF571VGS, ENCFF896AXB 6721551 ENCODE Processing Pipeline 1a5898aae46f24264cb0e76006108c16 https://www.encodeproject.org/files/ENCFF138NNW/@@download/ENCFF138NNW.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF511EVJ bigBed narrowPeak peaks ENCSR000BQB ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF024IBB 12200995 ENCODE Processing Pipeline c1d6817e62de3afbf0fb43b9b17d026c https://www.encodeproject.org/files/ENCFF511EVJ/@@download/ENCFF511EVJ.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF185SFC fastq reads ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF768WER 1698845514 Richard Myers, HAIB fcff17b60a21273cc168211099a84e71 SRA:SRR6212909 https://www.encodeproject.org/files/ENCFF185SFC/@@download/ENCFF185SFC.fastq.gz HiSeq 2000 /files/ENCFF098YMI/ released antibody characterized with exemption ENCFF768WER fastq reads ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF185SFC 1778240568 Richard Myers, HAIB b9ab111e3dcce5319d5d5fcfb6907f53 SRA:SRR6212909 https://www.encodeproject.org/files/ENCFF768WER/@@download/ENCFF768WER.fastq.gz HiSeq 2000 /files/ENCFF107FJA/ released antibody characterized with exemption ENCFF086PII bam unfiltered alignments ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF185SFC, ENCFF643CGH, ENCFF768WER 4329952843 ENCODE Processing Pipeline 480f1715bb7224caed5975e966178013 https://www.encodeproject.org/files/ENCFF086PII/@@download/ENCFF086PII.bam GRCh38 released antibody characterized with exemption ENCFF468RFT bam unfiltered alignments ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF185SFC, ENCFF768WER, ENCFF807MUK 4307710265 ENCODE Processing Pipeline 40d702ee839fb95b425f7949cbe7ecf1 https://www.encodeproject.org/files/ENCFF468RFT/@@download/ENCFF468RFT.bam hg19 released antibody characterized with exemption ENCFF786STT bam alignments ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF185SFC, ENCFF643CGH, ENCFF768WER 3312120280 ENCODE Processing Pipeline ba5189277f292ce7aa6595e26b47f7b6 https://www.encodeproject.org/files/ENCFF786STT/@@download/ENCFF786STT.bam GRCh38 released antibody characterized with exemption ENCFF991CXG bam alignments ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF185SFC, ENCFF768WER, ENCFF807MUK 3307515618 ENCODE Processing Pipeline 1802061a6d8b4d02df3997f052052545 https://www.encodeproject.org/files/ENCFF991CXG/@@download/ENCFF991CXG.bam hg19 released antibody characterized with exemption ENCFF329YTM bigWig fold change over control ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF786STT 1199139066 ENCODE Processing Pipeline c63de91de8abd772f440d70078633ab4 https://www.encodeproject.org/files/ENCFF329YTM/@@download/ENCFF329YTM.bigWig GRCh38 released antibody characterized with exemption ENCFF768QNP bigWig signal p-value ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF786STT 1152440020 ENCODE Processing Pipeline 4ba6e7d408e94d428ecfa392279948d5 https://www.encodeproject.org/files/ENCFF768QNP/@@download/ENCFF768QNP.bigWig GRCh38 released antibody characterized with exemption ENCFF458VJY bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF046VTZ 16477 ENCODE Processing Pipeline bcdbd024415fe57f55d1e9d730c1d790 https://www.encodeproject.org/files/ENCFF458VJY/@@download/ENCFF458VJY.bigBed GRCh38 released antibody characterized with exemption ENCFF835FOG bigBed narrowPeak peaks ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF516KJT 11488594 ENCODE Processing Pipeline 11d1fd8df388210ddbeba413b38a02ea https://www.encodeproject.org/files/ENCFF835FOG/@@download/ENCFF835FOG.bigBed GRCh38 released antibody characterized with exemption ENCFF046VTZ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF516KJT 752 ENCODE Processing Pipeline e2a612783343cc957cba0d97702f4917 https://www.encodeproject.org/files/ENCFF046VTZ/@@download/ENCFF046VTZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF516KJT bed narrowPeak peaks ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF786STT 5156502 ENCODE Processing Pipeline c5f895927b5147a518ddd5e5f5d24ec8 https://www.encodeproject.org/files/ENCFF516KJT/@@download/ENCFF516KJT.bed.gz GRCh38 released antibody characterized with exemption ENCFF200ZMM bigWig signal p-value ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF991CXG 1379066098 ENCODE Processing Pipeline 456eb39b9188fb245c85ce95674c0424 https://www.encodeproject.org/files/ENCFF200ZMM/@@download/ENCFF200ZMM.bigWig hg19 released antibody characterized with exemption ENCFF774YJG bigWig fold change over control ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF991CXG 1192870330 ENCODE Processing Pipeline 10c038083b15c54ec7c1f7542f379292 https://www.encodeproject.org/files/ENCFF774YJG/@@download/ENCFF774YJG.bigWig hg19 released antibody characterized with exemption ENCFF426BJU bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF745GHM 456 ENCODE Processing Pipeline f819f3abbe4f2b0d4fbe2bcf6286a209 https://www.encodeproject.org/files/ENCFF426BJU/@@download/ENCFF426BJU.bed.gz hg19 released antibody characterized with exemption ENCFF695AMM bigBed narrowPeak peaks ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF745GHM 11460033 ENCODE Processing Pipeline c18279692310944217c0c4753bc8af32 https://www.encodeproject.org/files/ENCFF695AMM/@@download/ENCFF695AMM.bigBed hg19 released antibody characterized with exemption ENCFF255NOE bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF426BJU 15217 ENCODE Processing Pipeline 30041b023aec11e2512591847d6483b4 https://www.encodeproject.org/files/ENCFF255NOE/@@download/ENCFF255NOE.bigBed hg19 released antibody characterized with exemption ENCFF745GHM bed narrowPeak peaks ENCSR046INL ChIP-seq UBERON:0000473 testis tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF991CXG 5150204 ENCODE Processing Pipeline 38ed709911e0f7a34d5f0bd3aea6834d https://www.encodeproject.org/files/ENCFF745GHM/@@download/ENCFF745GHM.bed.gz hg19 released antibody characterized with exemption ENCFF000MZI bigBed broadPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TSD 614613 Richard Myers, HAIB 28b7a985b46def73e2517599a35d39bd https://www.encodeproject.org/files/ENCFF000MZI/@@download/ENCFF000MZI.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MZJ bigBed broadPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TSE 1071523 Richard Myers, HAIB 2af0f9ea53038c0418b823ead7007242 https://www.encodeproject.org/files/ENCFF000MZJ/@@download/ENCFF000MZJ.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MZK bam alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000MZW 1759525244 Richard Myers, HAIB 3f22779fcd52a9e278502499bde2f002 https://www.encodeproject.org/files/ENCFF000MZK/@@download/ENCFF000MZK.bam hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MZL bam alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000MZT 1335993892 Richard Myers, HAIB ef794f9d58e707e8fd09f72ca93c3165 https://www.encodeproject.org/files/ENCFF000MZL/@@download/ENCFF000MZL.bam hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MZM bigWig raw signal ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 1 21993136 Richard Myers, HAIB 699f5b0c5b01d9f78ae7d20ff643df75 https://www.encodeproject.org/files/ENCFF000MZM/@@download/ENCFF000MZM.bigWig hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000MZN bigWig raw signal ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 1 38287861 Richard Myers, HAIB 626df602f4d9e5b3e88c08df6ac6bf08 https://www.encodeproject.org/files/ENCFF000MZN/@@download/ENCFF000MZN.bigWig hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000MZT fastq reads ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1340075967 Richard Myers, HAIB 9e2be6884fe00e89cee36da8f369a356 https://www.encodeproject.org/files/ENCFF000MZT/@@download/ENCFF000MZT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MZW fastq reads ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1761892911 Richard Myers, HAIB 9c4935af3f52b1811cc4dfa9545f2378 https://www.encodeproject.org/files/ENCFF000MZW/@@download/ENCFF000MZW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TSD bed broadPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 1 349944 Richard Myers, HAIB 11c1e41145f6d6657b0e6974a9875790 https://www.encodeproject.org/files/ENCFF001TSD/@@download/ENCFF001TSD.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TSE bed broadPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 1 595245 Richard Myers, HAIB 01ca68e188ae6f0aa020fc80d67bf14e https://www.encodeproject.org/files/ENCFF001TSE/@@download/ENCFF001TSE.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CFN bed narrowPeak optimal idr thresholded peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 690173 ENCODE Consortium Analysis Working Group 880d3868aaf5aefbafbb19364ada7b71 https://www.encodeproject.org/files/ENCFF002CFN/@@download/ENCFF002CFN.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF340KKH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE ENCFF002CFN 1611856 ENCODE Consortium 0c347f0b9a09936e0d68995adf324816 https://www.encodeproject.org/files/ENCFF340KKH/@@download/ENCFF340KKH.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF529FWD bam unfiltered alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZT, ENCFF643CGH 1451276669 ENCODE Processing Pipeline be6ccc03821c35a0b12c86b25c2cb7fc https://www.encodeproject.org/files/ENCFF529FWD/@@download/ENCFF529FWD.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF125MJO bam alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZT, ENCFF643CGH 911844798 ENCODE Processing Pipeline 6aea0da008ef8128b06bcd7dfa2b6d73 https://www.encodeproject.org/files/ENCFF125MJO/@@download/ENCFF125MJO.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF717EFF bam unfiltered alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZW, ENCFF643CGH 1910944281 ENCODE Processing Pipeline 61ed7db46cd0de0dc71bf70757643859 https://www.encodeproject.org/files/ENCFF717EFF/@@download/ENCFF717EFF.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF585INN bam alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZW, ENCFF643CGH 1136848851 ENCODE Processing Pipeline 8a86dec60845ff95dcbaa017f6e14fb0 https://www.encodeproject.org/files/ENCFF585INN/@@download/ENCFF585INN.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF687FZP bam unfiltered alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZT, ENCFF807MUK 1447640471 ENCODE Processing Pipeline fa08d869b6a1336ac5ab31119314332e https://www.encodeproject.org/files/ENCFF687FZP/@@download/ENCFF687FZP.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF694YNY bam unfiltered alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZW, ENCFF807MUK 1905965595 ENCODE Processing Pipeline 9b4e3dc4647c9b23d1015bb04150a97b https://www.encodeproject.org/files/ENCFF694YNY/@@download/ENCFF694YNY.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF159NGH bam alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZT, ENCFF807MUK 911961721 ENCODE Processing Pipeline 17ddc3f358276c44db275b9bc044419d https://www.encodeproject.org/files/ENCFF159NGH/@@download/ENCFF159NGH.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF983PHR bam alignments ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZW, ENCFF807MUK 1136943540 ENCODE Processing Pipeline da7a55ca787d0233ed7ed7e04da0ffd9 https://www.encodeproject.org/files/ENCFF983PHR/@@download/ENCFF983PHR.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF549CCA bigWig signal p-value ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 ENCFF585INN 623225111 ENCODE Processing Pipeline bb96d098ef3df1b6434dde1982431a83 https://www.encodeproject.org/files/ENCFF549CCA/@@download/ENCFF549CCA.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF760RPU bigWig signal p-value ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 ENCFF125MJO 583516114 ENCODE Processing Pipeline ea8b9207a9df8d46cae796aa8785ebf8 https://www.encodeproject.org/files/ENCFF760RPU/@@download/ENCFF760RPU.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF172POF bigWig signal p-value ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF125MJO, ENCFF585INN 828078299 ENCODE Processing Pipeline 445b005acab767ce086df210365562e7 https://www.encodeproject.org/files/ENCFF172POF/@@download/ENCFF172POF.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF062RVU bigWig fold change over control ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 ENCFF585INN 590584809 ENCODE Processing Pipeline a184a3efb4542f7d34a212124c210708 https://www.encodeproject.org/files/ENCFF062RVU/@@download/ENCFF062RVU.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF660SDY bigWig fold change over control ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 ENCFF125MJO 528687637 ENCODE Processing Pipeline edf88554ca6c8a499678f15cf5ec5617 https://www.encodeproject.org/files/ENCFF660SDY/@@download/ENCFF660SDY.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF815VKQ bed narrowPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 ENCFF125MJO 6261853 ENCODE Processing Pipeline 804cabc7571eb11c8ec243ab62488114 https://www.encodeproject.org/files/ENCFF815VKQ/@@download/ENCFF815VKQ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF003HMX bigBed narrowPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234WBQ 13298187 ENCODE Processing Pipeline 04382ba4bfe62f27d7e35699b43dd196 https://www.encodeproject.org/files/ENCFF003HMX/@@download/ENCFF003HMX.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF340TFY bigWig fold change over control ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF125MJO, ENCFF585INN 913054873 ENCODE Processing Pipeline 255c331c84fd22980d9598097d949b89 https://www.encodeproject.org/files/ENCFF340TFY/@@download/ENCFF340TFY.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF234WBQ bed narrowPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1 ENCFF585INN 5778032 ENCODE Processing Pipeline e7f4a9f5a60b16b59363d70541ac8e5a https://www.encodeproject.org/files/ENCFF234WBQ/@@download/ENCFF234WBQ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF477TDU bed narrowPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF125MJO, ENCFF585INN 6709269 ENCODE Processing Pipeline 673aa93191e08d11be8f9475850c8cf6 https://www.encodeproject.org/files/ENCFF477TDU/@@download/ENCFF477TDU.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF630XDG bigBed narrowPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 2 ENCFF815VKQ 12906877 ENCODE Processing Pipeline 420cf37b8f3c12c2f5b7759e46339e79 https://www.encodeproject.org/files/ENCFF630XDG/@@download/ENCFF630XDG.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF381KWH bigBed narrowPeak peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF477TDU 13091852 ENCODE Processing Pipeline adc58666f8c77524d80bdb531cbdd5aa https://www.encodeproject.org/files/ENCFF381KWH/@@download/ENCFF381KWH.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF065DAM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF808RWZ 1132052 ENCODE Processing Pipeline 62a04c5df7bc64d421073d62c4939461 https://www.encodeproject.org/files/ENCFF065DAM/@@download/ENCFF065DAM.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF534KIM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF402BIZ 1077238 ENCODE Processing Pipeline d04468f5bc304f331f729af2495ece8a https://www.encodeproject.org/files/ENCFF534KIM/@@download/ENCFF534KIM.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF808RWZ bed narrowPeak optimal idr thresholded peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234WBQ, ENCFF419RSJ, ENCFF477TDU, ENCFF815VKQ 542778 ENCODE Processing Pipeline fa13fe264c7e2c62f6e6023d08f3cdd9 https://www.encodeproject.org/files/ENCFF808RWZ/@@download/ENCFF808RWZ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF402BIZ bed narrowPeak conservative idr thresholded peaks ENCSR000BQO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol FOSL2-human ENCAB000AGL DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234WBQ, ENCFF419RSJ, ENCFF477TDU, ENCFF815VKQ 508196 ENCODE Processing Pipeline 29a9c8f74471bee8ff2878b405d92526 https://www.encodeproject.org/files/ENCFF402BIZ/@@download/ENCFF402BIZ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF324QQE fastq reads ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 1 50 single-ended 1368984243 Richard Myers, HAIB 59792415893ff8582b26bb5c000f213e SRA:SRR5331417 https://www.encodeproject.org/files/ENCFF324QQE/@@download/ENCFF324QQE.fastq.gz HiSeq 2000 /files/ENCFF598SBH/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF188ZWJ fastq reads ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 1 50 single-ended 1579236809 Richard Myers, HAIB 25572ee0d8eaf426b361d167a316eedd SRA:SRR5331416 https://www.encodeproject.org/files/ENCFF188ZWJ/@@download/ENCFF188ZWJ.fastq.gz HiSeq 2500 /files/ENCFF381XXA/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF262KHM bam alignments ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 50 ENCFF324QQE, ENCFF807MUK 1033909070 ENCODE Processing Pipeline e03bd99038584a1d067d42071b11741d https://www.encodeproject.org/files/ENCFF262KHM/@@download/ENCFF262KHM.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF437VCI bam alignments ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 50 ENCFF188ZWJ, ENCFF807MUK 1203001510 ENCODE Processing Pipeline 444dad331cc493aa1a3a0e1a0f91737c https://www.encodeproject.org/files/ENCFF437VCI/@@download/ENCFF437VCI.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF592UEL bigWig signal p-value ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 ENCFF437VCI, ENCFF935ZWS 670826993 ENCODE Processing Pipeline 2366b2f7185baf6efe170fd672a40d7f https://www.encodeproject.org/files/ENCFF592UEL/@@download/ENCFF592UEL.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF254LCG bed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF262KHM, ENCFF313NWV, ENCFF437VCI, ENCFF935ZWS 6925793 ENCODE Processing Pipeline 343b8c3847fd115c7e315e73b8dc2201 https://www.encodeproject.org/files/ENCFF254LCG/@@download/ENCFF254LCG.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF122XQS bigWig signal p-value ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF262KHM, ENCFF313NWV, ENCFF437VCI, ENCFF935ZWS 1200944935 ENCODE Processing Pipeline 00492247b014270ea333d3eeffdf5ce6 https://www.encodeproject.org/files/ENCFF122XQS/@@download/ENCFF122XQS.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF281NZH bigWig signal p-value ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 ENCFF262KHM, ENCFF313NWV 592925890 ENCODE Processing Pipeline 031b9f36ad67aca4863d88ee53be4d0a https://www.encodeproject.org/files/ENCFF281NZH/@@download/ENCFF281NZH.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF561DWH bigWig fold change over control ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 ENCFF437VCI, ENCFF935ZWS 553671488 ENCODE Processing Pipeline 5a7b841af5e122598bafcd67d77a1021 https://www.encodeproject.org/files/ENCFF561DWH/@@download/ENCFF561DWH.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF382LFK bigBed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 ENCFF050FWJ 12723242 ENCODE Processing Pipeline 9a621834d07a78058f4a2ee484e91e91 https://www.encodeproject.org/files/ENCFF382LFK/@@download/ENCFF382LFK.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF021JVO bigWig fold change over control ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 ENCFF262KHM, ENCFF313NWV 509959307 ENCODE Processing Pipeline 14fde8f2b7f032a1d95e04a05cb99f2c https://www.encodeproject.org/files/ENCFF021JVO/@@download/ENCFF021JVO.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF758PJS bigWig fold change over control ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF262KHM, ENCFF313NWV, ENCFF437VCI, ENCFF935ZWS 1183468014 ENCODE Processing Pipeline 59d04092d4348d357b5058546285149d https://www.encodeproject.org/files/ENCFF758PJS/@@download/ENCFF758PJS.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF327ANX bed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 ENCFF437VCI, ENCFF935ZWS 6627642 ENCODE Processing Pipeline 8c9308a316f7f6ca9e4a33067b11c5d4 https://www.encodeproject.org/files/ENCFF327ANX/@@download/ENCFF327ANX.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF050FWJ bed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 ENCFF262KHM, ENCFF313NWV 6409186 ENCODE Processing Pipeline d3f612216c91518b7a870c5b288a9ed3 https://www.encodeproject.org/files/ENCFF050FWJ/@@download/ENCFF050FWJ.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF687JGN bigBed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF254LCG 12707723 ENCODE Processing Pipeline 887aeed2ef07017fc92a73da83b87b8e https://www.encodeproject.org/files/ENCFF687JGN/@@download/ENCFF687JGN.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF348IKJ bigBed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 ENCFF327ANX 12890934 ENCODE Processing Pipeline be0ee6d377e54c77aad416f8e36c5d91 https://www.encodeproject.org/files/ENCFF348IKJ/@@download/ENCFF348IKJ.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF483IJC bam unfiltered alignments ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 50 ENCFF324QQE, ENCFF643CGH 1438216426 ENCODE Processing Pipeline 4544d9a5952fcad26cb161dba2b806eb https://www.encodeproject.org/files/ENCFF483IJC/@@download/ENCFF483IJC.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF032UFJ bam unfiltered alignments ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 50 ENCFF188ZWJ, ENCFF643CGH 1663220697 ENCODE Processing Pipeline 94e465d07f76eb0fb87744c3cf130a98 https://www.encodeproject.org/files/ENCFF032UFJ/@@download/ENCFF032UFJ.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF632KTY bam alignments ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 50 ENCFF324QQE, ENCFF643CGH 1039319879 ENCODE Processing Pipeline 8ba08834748a981866d8fd1b389e2ed0 https://www.encodeproject.org/files/ENCFF632KTY/@@download/ENCFF632KTY.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF408KYB bam alignments ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 50 ENCFF188ZWJ, ENCFF643CGH 1210215277 ENCODE Processing Pipeline c8ed829dcadde3725535e6c19657feb4 https://www.encodeproject.org/files/ENCFF408KYB/@@download/ENCFF408KYB.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF655QWY bigWig signal p-value ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 ENCFF408KYB, ENCFF940GKZ 650399752 ENCODE Processing Pipeline b4a9578bb2fb8398a13a7cc77374c0fd https://www.encodeproject.org/files/ENCFF655QWY/@@download/ENCFF655QWY.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF292EDC bigWig signal p-value ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 ENCFF409OXD, ENCFF632KTY 612569184 ENCODE Processing Pipeline cce07ac86f74c533c7d8417d452a4758 https://www.encodeproject.org/files/ENCFF292EDC/@@download/ENCFF292EDC.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF526JAB bigWig signal p-value ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF408KYB, ENCFF409OXD, ENCFF632KTY, ENCFF940GKZ 1198924408 ENCODE Processing Pipeline 0a9cf2686adc9abe7938c15b685b495c https://www.encodeproject.org/files/ENCFF526JAB/@@download/ENCFF526JAB.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF764GUD bigWig fold change over control ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 ENCFF408KYB, ENCFF940GKZ 559705424 ENCODE Processing Pipeline f3bf61622f75e509169c2829dfdbe090 https://www.encodeproject.org/files/ENCFF764GUD/@@download/ENCFF764GUD.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF478ISK bigWig fold change over control ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 ENCFF409OXD, ENCFF632KTY 509506344 ENCODE Processing Pipeline a5fd0c55d180c186f9c5b9270eb11eb5 https://www.encodeproject.org/files/ENCFF478ISK/@@download/ENCFF478ISK.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF713ZGU bed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 ENCFF408KYB, ENCFF940GKZ 6588530 ENCODE Processing Pipeline b27185cb8bc47dada2d68de6e0d3dba9 https://www.encodeproject.org/files/ENCFF713ZGU/@@download/ENCFF713ZGU.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF699ETX bigWig fold change over control ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF408KYB, ENCFF409OXD, ENCFF632KTY, ENCFF940GKZ 1176082338 ENCODE Processing Pipeline 446afd2a91e683d78aece20aef8e7ce2 https://www.encodeproject.org/files/ENCFF699ETX/@@download/ENCFF699ETX.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF221YFP bigBed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1 ENCFF713ZGU 13012775 ENCODE Processing Pipeline 8f35d280732151360b1c3daa6b1d3c15 https://www.encodeproject.org/files/ENCFF221YFP/@@download/ENCFF221YFP.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF004DIE bed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 ENCFF409OXD, ENCFF632KTY 6366300 ENCODE Processing Pipeline 2ad5422fa09d5e3bf068dca3f2b55b4a https://www.encodeproject.org/files/ENCFF004DIE/@@download/ENCFF004DIE.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF279XTW bed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF408KYB, ENCFF409OXD, ENCFF632KTY, ENCFF940GKZ 7006492 ENCODE Processing Pipeline 5c548a85e832864a1a7ab399ba553db1 https://www.encodeproject.org/files/ENCFF279XTW/@@download/ENCFF279XTW.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF797ETP bigBed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 2 ENCFF004DIE 12839326 ENCODE Processing Pipeline 017cb956b981b0aceb82eac3dae44f68 https://www.encodeproject.org/files/ENCFF797ETP/@@download/ENCFF797ETP.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF041QPS bed narrowPeak conservative idr thresholded peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF004DIE, ENCFF279XTW, ENCFF419RSJ, ENCFF713ZGU 614257 ENCODE Processing Pipeline 0f7f2866fd405d5172f47aba70a37460 https://www.encodeproject.org/files/ENCFF041QPS/@@download/ENCFF041QPS.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF838EFI bigBed narrowPeak conservative idr thresholded peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF041QPS 1150876 ENCODE Processing Pipeline 31dc462bdc5345be5200afed9b437068 https://www.encodeproject.org/files/ENCFF838EFI/@@download/ENCFF838EFI.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF311PMS bigBed narrowPeak peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF279XTW 12850995 ENCODE Processing Pipeline 5398a9b5bdb3207a222ba5b3f868338b https://www.encodeproject.org/files/ENCFF311PMS/@@download/ENCFF311PMS.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF023ALY bed narrowPeak optimal idr thresholded peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF004DIE, ENCFF279XTW, ENCFF419RSJ, ENCFF713ZGU 663372 ENCODE Processing Pipeline 134887a21367574f6941b653ad5a6301 https://www.encodeproject.org/files/ENCFF023ALY/@@download/ENCFF023ALY.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF239KVL bigBed narrowPeak optimal idr thresholded peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF023ALY 1220598 ENCODE Processing Pipeline f8f79893a38cfe21f666f83eb5e34de4 https://www.encodeproject.org/files/ENCFF239KVL/@@download/ENCFF239KVL.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF393KDR bed narrowPeak conservative idr thresholded peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF050FWJ, ENCFF254LCG, ENCFF327ANX 557790 ENCODE Processing Pipeline 47c0e8c63a412e4f81edf836f9099541 https://www.encodeproject.org/files/ENCFF393KDR/@@download/ENCFF393KDR.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF841AWG bigBed narrowPeak conservative idr thresholded peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF393KDR 1077028 ENCODE Processing Pipeline 6aaf05056c1fa2173c9228ba25922412 https://www.encodeproject.org/files/ENCFF841AWG/@@download/ENCFF841AWG.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF242VUO bed narrowPeak optimal idr thresholded peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF050FWJ, ENCFF254LCG, ENCFF327ANX 592515 ENCODE Processing Pipeline ffafc1a8641763eab50f8a610d2a523f https://www.encodeproject.org/files/ENCFF242VUO/@@download/ENCFF242VUO.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF191FEN bigBed narrowPeak optimal idr thresholded peaks ENCSR199WXF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EED-human ENCAB000BOT DNA False 2016-03-30 ENCODE 1, 2 ENCFF242VUO 1125429 ENCODE Processing Pipeline c4847c04244f4feddda4609feb54669b https://www.encodeproject.org/files/ENCFF191FEN/@@download/ENCFF191FEN.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF206ARZ fastq reads ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 1 50 single-ended 1189586211 Richard Myers, HAIB 467f2ebabe696c458198205cdc226053 SRA:SRR5339393 https://www.encodeproject.org/files/ENCFF206ARZ/@@download/ENCFF206ARZ.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released low read depth, moderate library complexity ENCFF252RBF fastq reads ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 1 50 single-ended 1125296409 Richard Myers, HAIB 4f0e8b31307e3a995099a7a7392facbd SRA:SRR5339392 https://www.encodeproject.org/files/ENCFF252RBF/@@download/ENCFF252RBF.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released low read depth, moderate library complexity ENCFF862RTJ bam alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 50 ENCFF206ARZ, ENCFF807MUK 718270539 ENCODE Processing Pipeline 144b95e9b136afd3475ffe9564ee7434 https://www.encodeproject.org/files/ENCFF862RTJ/@@download/ENCFF862RTJ.bam hg19 released low read depth, moderate library complexity ENCFF742QOQ bam alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 50 ENCFF252RBF, ENCFF807MUK 754715535 ENCODE Processing Pipeline 6360ff2ee76218c03cdb37b9efd5caf7 https://www.encodeproject.org/files/ENCFF742QOQ/@@download/ENCFF742QOQ.bam hg19 released low read depth, moderate library complexity ENCFF978AGA bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862RTJ 905009147 ENCODE Processing Pipeline 6ac48a4d557d09f9dd8cdc7b21cb7844 https://www.encodeproject.org/files/ENCFF978AGA/@@download/ENCFF978AGA.bigWig hg19 released low read depth, moderate library complexity ENCFF300JRB bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ 924957599 ENCODE Processing Pipeline e38deb9b6f49fcce4e865a2863c72029 https://www.encodeproject.org/files/ENCFF300JRB/@@download/ENCFF300JRB.bigWig hg19 released low read depth, moderate library complexity ENCFF812ZYM bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ, ENCFF862RTJ 1005407653 ENCODE Processing Pipeline 1d372b2507a94c4da5a0189aeb470878 https://www.encodeproject.org/files/ENCFF812ZYM/@@download/ENCFF812ZYM.bigWig hg19 released low read depth, moderate library complexity ENCFF576VLX bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ 653935114 ENCODE Processing Pipeline 4bb12e2bf0d251452f9f1c4c64fb968b https://www.encodeproject.org/files/ENCFF576VLX/@@download/ENCFF576VLX.bigWig hg19 released low read depth, moderate library complexity ENCFF352ACZ bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862RTJ 591203467 ENCODE Processing Pipeline 7153a020df82e06caa25cd0c5c3a574f https://www.encodeproject.org/files/ENCFF352ACZ/@@download/ENCFF352ACZ.bigWig hg19 released low read depth, moderate library complexity ENCFF027MWG bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ, ENCFF862RTJ 981625613 ENCODE Processing Pipeline e2c2fef280ae52141429c4d62fe608e5 https://www.encodeproject.org/files/ENCFF027MWG/@@download/ENCFF027MWG.bigWig hg19 released low read depth, moderate library complexity ENCFF870HGG bam unfiltered alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 50 ENCFF206ARZ, ENCFF643CGH 1144151099 ENCODE Processing Pipeline 9edfb388cf89b0a64e431b040de20465 https://www.encodeproject.org/files/ENCFF870HGG/@@download/ENCFF870HGG.bam GRCh38 released low read depth, moderate library complexity ENCFF185CRQ bam unfiltered alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 50 ENCFF252RBF, ENCFF643CGH 1113350402 ENCODE Processing Pipeline 2ca59d9d834c1342976759ccf09a642b https://www.encodeproject.org/files/ENCFF185CRQ/@@download/ENCFF185CRQ.bam GRCh38 released low read depth, moderate library complexity ENCFF564KCD bam alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 50 ENCFF252RBF, ENCFF643CGH 754403095 ENCODE Processing Pipeline 5d0c9bea684814459d75f3b33609208e https://www.encodeproject.org/files/ENCFF564KCD/@@download/ENCFF564KCD.bam GRCh38 released low read depth, moderate library complexity ENCFF207NLX bam alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 50 ENCFF206ARZ, ENCFF643CGH 717958307 ENCODE Processing Pipeline 6a1b6a04f9a88695bf844b4e96438ddb https://www.encodeproject.org/files/ENCFF207NLX/@@download/ENCFF207NLX.bam GRCh38 released low read depth, moderate library complexity ENCFF058DPW bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF207NLX, ENCFF332SVJ, ENCFF709XAA 906441624 ENCODE Processing Pipeline 930911f2e51fe7e5ec0b70b4bfe0c1b8 https://www.encodeproject.org/files/ENCFF058DPW/@@download/ENCFF058DPW.bigWig GRCh38 released low read depth, moderate library complexity ENCFF308RKT bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 1011894179 ENCODE Processing Pipeline 324588031893185def2c4b4b4d0dd27b https://www.encodeproject.org/files/ENCFF308RKT/@@download/ENCFF308RKT.bigWig GRCh38 released low read depth, moderate library complexity ENCFF197LZX bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF207NLX, ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 1175973226 ENCODE Processing Pipeline a23a82e59bb8e945165e64babec59e58 https://www.encodeproject.org/files/ENCFF197LZX/@@download/ENCFF197LZX.bigWig GRCh38 released low read depth, moderate library complexity ENCFF728GJW bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF207NLX, ENCFF332SVJ, ENCFF709XAA 589918499 ENCODE Processing Pipeline f8d456cb87e393ffb23664abe5aa74e0 https://www.encodeproject.org/files/ENCFF728GJW/@@download/ENCFF728GJW.bigWig GRCh38 released low read depth, moderate library complexity ENCFF267SKK bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 651760488 ENCODE Processing Pipeline 45b57e81cace45d4e3540bbd258760ef https://www.encodeproject.org/files/ENCFF267SKK/@@download/ENCFF267SKK.bigWig GRCh38 released low read depth, moderate library complexity ENCFF932HVW bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF207NLX, ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 978529953 ENCODE Processing Pipeline 727c9912fedb2bf0fcefc182abd79ef7 https://www.encodeproject.org/files/ENCFF932HVW/@@download/ENCFF932HVW.bigWig GRCh38 released low read depth, moderate library complexity ENCFF617KCZ bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF207NLX, ENCFF332SVJ, ENCFF709XAA 5841840 ENCODE Processing Pipeline 1b3caa2049a8b1d6339b5104dd2e9826 https://www.encodeproject.org/files/ENCFF617KCZ/@@download/ENCFF617KCZ.bed.gz GRCh38 released low read depth, moderate library complexity ENCFF161WZP bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 5869046 ENCODE Processing Pipeline d86dd6901457021f3560e99080d887d1 https://www.encodeproject.org/files/ENCFF161WZP/@@download/ENCFF161WZP.bed.gz GRCh38 released low read depth, moderate library complexity ENCFF534QFC bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF161WZP 13486480 ENCODE Processing Pipeline 7e642d04a792e6fe82e98ccb464ffc0e https://www.encodeproject.org/files/ENCFF534QFC/@@download/ENCFF534QFC.bigBed GRCh38 released low read depth, moderate library complexity ENCFF636TZL bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF207NLX, ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 6373780 ENCODE Processing Pipeline 1509ce7c1c429fd1c7d7ff51e19b94d4 https://www.encodeproject.org/files/ENCFF636TZL/@@download/ENCFF636TZL.bed.gz GRCh38 released low read depth, moderate library complexity ENCFF812GVV bigBed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF626VDA 691149 ENCODE Processing Pipeline 7dfd8eaeb418179ca9974c49bebe64d6 https://www.encodeproject.org/files/ENCFF812GVV/@@download/ENCFF812GVV.bigBed GRCh38 released low read depth, moderate library complexity ENCFF116DXL bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF617KCZ 13392542 ENCODE Processing Pipeline 57f4568567a6ddce486fbbac44a2941e https://www.encodeproject.org/files/ENCFF116DXL/@@download/ENCFF116DXL.bigBed GRCh38 released low read depth, moderate library complexity ENCFF651QMX bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF636TZL 13579785 ENCODE Processing Pipeline 199f3dd641ee09595e9919aec1844030 https://www.encodeproject.org/files/ENCFF651QMX/@@download/ENCFF651QMX.bigBed GRCh38 released low read depth, moderate library complexity ENCFF626VDA bed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF161WZP, ENCFF419RSJ, ENCFF617KCZ, ENCFF636TZL 376439 ENCODE Processing Pipeline 073ab3f58f304ec82215a5ecfcb383b8 https://www.encodeproject.org/files/ENCFF626VDA/@@download/ENCFF626VDA.bed.gz GRCh38 released low read depth, moderate library complexity ENCFF064VGJ bam unfiltered alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 50 ENCFF206ARZ, ENCFF807MUK 1142476952 ENCODE Processing Pipeline 878487d46c0c3e6ef33b63ec67697450 https://www.encodeproject.org/files/ENCFF064VGJ/@@download/ENCFF064VGJ.bam hg19 released low read depth, moderate library complexity ENCFF746AYT bam unfiltered alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 50 ENCFF252RBF, ENCFF807MUK 1111610277 ENCODE Processing Pipeline 3976abffe3ad51329652fff8e6569080 https://www.encodeproject.org/files/ENCFF746AYT/@@download/ENCFF746AYT.bam hg19 released low read depth, moderate library complexity ENCFF606MZK bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862RTJ 5843860 ENCODE Processing Pipeline 951c843562da6d636f7e4f4647195342 https://www.encodeproject.org/files/ENCFF606MZK/@@download/ENCFF606MZK.bed.gz hg19 released low read depth, moderate library complexity ENCFF807NSC bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF606MZK 13385130 ENCODE Processing Pipeline c4f97e229bf50809aba8cb867179d249 https://www.encodeproject.org/files/ENCFF807NSC/@@download/ENCFF807NSC.bigBed hg19 released low read depth, moderate library complexity ENCFF144PPR bed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF001TDO, ENCFF559ITE, ENCFF606MZK, ENCFF892HJT 370811 ENCODE Processing Pipeline ed341ef382b1729a4467c26b9d7afc00 https://www.encodeproject.org/files/ENCFF144PPR/@@download/ENCFF144PPR.bed.gz hg19 released low read depth, moderate library complexity mismatched status ENCFF205RKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF144PPR 680314 ENCODE Processing Pipeline 3b9ad4731a6d7702cc07ff49e619fe1f https://www.encodeproject.org/files/ENCFF205RKZ/@@download/ENCFF205RKZ.bigBed hg19 released low read depth, moderate library complexity ENCFF892HJT bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ 5874459 ENCODE Processing Pipeline f7b54c7101852b2eae0e6453528c8cd5 https://www.encodeproject.org/files/ENCFF892HJT/@@download/ENCFF892HJT.bed.gz hg19 released low read depth, moderate library complexity ENCFF111EWY bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF559ITE 13550444 ENCODE Processing Pipeline 61e6d94202a567d6819c1cf3bffaccb7 https://www.encodeproject.org/files/ENCFF111EWY/@@download/ENCFF111EWY.bigBed hg19 released low read depth, moderate library complexity ENCFF559ITE bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ, ENCFF862RTJ 6386406 ENCODE Processing Pipeline 1bc4bd7836fca6a87e852936ce357253 https://www.encodeproject.org/files/ENCFF559ITE/@@download/ENCFF559ITE.bed.gz hg19 released low read depth, moderate library complexity ENCFF604ADM bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF892HJT 13476175 ENCODE Processing Pipeline e998e9aed28b80d961112669ca158bee https://www.encodeproject.org/files/ENCFF604ADM/@@download/ENCFF604ADM.bigBed hg19 released low read depth, moderate library complexity ENCFF000PWT bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PXH 1612276012 Richard Myers, HAIB c9f52394542ddd0ae83f7185a73cc7e4 https://www.encodeproject.org/files/ENCFF000PWT/@@download/ENCFF000PWT.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000PWU bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PXC 301319550 Richard Myers, HAIB 0eed3f5bb8e39d3488eef203473a4c1d https://www.encodeproject.org/files/ENCFF000PWU/@@download/ENCFF000PWU.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000PWV bigBed broadPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UJE 723672 Richard Myers, HAIB 286005c229c7d033b961d899ad18e93a https://www.encodeproject.org/files/ENCFF000PWV/@@download/ENCFF000PWV.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000PWW bigBed broadPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UJF 351814 Richard Myers, HAIB edc1d22469d19388980b0b8a2f218479 https://www.encodeproject.org/files/ENCFF000PWW/@@download/ENCFF000PWW.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000PWY bigWig raw signal ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 35347402 Richard Myers, HAIB 2529b565e11b4dabf8b085b44ca0ddd6 https://www.encodeproject.org/files/ENCFF000PWY/@@download/ENCFF000PWY.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PWZ bigWig raw signal ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 4044294 Richard Myers, HAIB b786f75cc8e1ce70aca6b93db938c625 https://www.encodeproject.org/files/ENCFF000PWZ/@@download/ENCFF000PWZ.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PXC fastq reads ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 284966874 Richard Myers, HAIB bebfabcd8b5984935c98ffa4edc7dbd8 https://www.encodeproject.org/files/ENCFF000PXC/@@download/ENCFF000PXC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000PXH fastq reads ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1561986353 Richard Myers, HAIB ca3051e8325dc634495033955db7cf1a https://www.encodeproject.org/files/ENCFF000PXH/@@download/ENCFF000PXH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF001UJE bed broadPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 451843 Richard Myers, HAIB e7dceda33860c95b624e20d4dd2ef1a2 https://www.encodeproject.org/files/ENCFF001UJE/@@download/ENCFF001UJE.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UJF bed broadPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 203262 Richard Myers, HAIB a079e6273be430fa84aebff44799dd3e https://www.encodeproject.org/files/ENCFF001UJF/@@download/ENCFF001UJF.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CLR bed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 435226 ENCODE Consortium Analysis Working Group 2d10e26f9b61edce33b6059246986ef0 https://www.encodeproject.org/files/ENCFF002CLR/@@download/ENCFF002CLR.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF987DFQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE ENCFF002CLR 938772 ENCODE Consortium 3c855a1f08c583e7b306dad5bb05e670 https://www.encodeproject.org/files/ENCFF987DFQ/@@download/ENCFF987DFQ.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF873KUV bam unfiltered alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXC, ENCFF643CGH 324925942 ENCODE Processing Pipeline 08039c09a1635fe7fb979e9ca2c714c3 https://www.encodeproject.org/files/ENCFF873KUV/@@download/ENCFF873KUV.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF154YTN bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXC, ENCFF643CGH 220620394 ENCODE Processing Pipeline 0344302f82a6752f7ca2a29be717f27b https://www.encodeproject.org/files/ENCFF154YTN/@@download/ENCFF154YTN.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF706JAK bam unfiltered alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXH, ENCFF643CGH 1730829935 ENCODE Processing Pipeline 88d609c3a95eff66acb143ccee2d0d70 https://www.encodeproject.org/files/ENCFF706JAK/@@download/ENCFF706JAK.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF314OQP bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXH, ENCFF643CGH 1108796762 ENCODE Processing Pipeline 9eb519249d6b885945bf1feca2aef1fa https://www.encodeproject.org/files/ENCFF314OQP/@@download/ENCFF314OQP.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF897GTJ bam unfiltered alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXC, ENCFF807MUK 324323726 ENCODE Processing Pipeline abd57d78babcc1cb771b23a700aec079 https://www.encodeproject.org/files/ENCFF897GTJ/@@download/ENCFF897GTJ.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF505XKZ bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXC, ENCFF807MUK 220770334 ENCODE Processing Pipeline 6185b9a7afaedfa5f20e9f161b0809ef https://www.encodeproject.org/files/ENCFF505XKZ/@@download/ENCFF505XKZ.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF357EBD bam unfiltered alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXH, ENCFF807MUK 1727732332 ENCODE Processing Pipeline 318200b999108f8ea98c3b4c0c624009 https://www.encodeproject.org/files/ENCFF357EBD/@@download/ENCFF357EBD.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF935XJG bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXH, ENCFF807MUK 1109295957 ENCODE Processing Pipeline 4e38b397b203f92e5aa0ce576f1fbeb4 https://www.encodeproject.org/files/ENCFF935XJG/@@download/ENCFF935XJG.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF943LAJ bigWig fold change over control ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF314OQP, ENCFF836OEO 601210277 ENCODE Processing Pipeline c5589a0c556f0007081643523a254666 https://www.encodeproject.org/files/ENCFF943LAJ/@@download/ENCFF943LAJ.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF925BLR bigWig signal p-value ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF154YTN, ENCFF836OEO 448718671 ENCODE Processing Pipeline 488864bdd33b8df8073b2832db8a6ff5 https://www.encodeproject.org/files/ENCFF925BLR/@@download/ENCFF925BLR.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF814AET bigWig signal p-value ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF154YTN, ENCFF314OQP, ENCFF836OEO 674000950 ENCODE Processing Pipeline 6924791c9ff3c937389f21ec1bbc91ba https://www.encodeproject.org/files/ENCFF814AET/@@download/ENCFF814AET.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF956YUO bigWig signal p-value ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF314OQP, ENCFF836OEO 670737899 ENCODE Processing Pipeline 6acd262b4c8eea5498a2b95de85701ca https://www.encodeproject.org/files/ENCFF956YUO/@@download/ENCFF956YUO.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF038ECN bigWig fold change over control ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF154YTN, ENCFF314OQP, ENCFF836OEO 669994536 ENCODE Processing Pipeline 2e99657a1f159ce3f32c04cd371ae135 https://www.encodeproject.org/files/ENCFF038ECN/@@download/ENCFF038ECN.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF512WXR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF813LOW 744066 ENCODE Processing Pipeline 8b4a7d8ed849f8770b1da12a96a5c108 https://www.encodeproject.org/files/ENCFF512WXR/@@download/ENCFF512WXR.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF382AWH bigWig fold change over control ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF154YTN, ENCFF836OEO 155138257 ENCODE Processing Pipeline c52d669a584697bb2c5365c38b0ecd0a https://www.encodeproject.org/files/ENCFF382AWH/@@download/ENCFF382AWH.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF239OYD bigBed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF220UJA 13287065 ENCODE Processing Pipeline 0ed9d8cffbf657f72f6159902b2a8aaa https://www.encodeproject.org/files/ENCFF239OYD/@@download/ENCFF239OYD.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF765ZVU bigBed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF258YCI 3718780 ENCODE Processing Pipeline 297277b2e822bcd7b1823b2433ee02d5 https://www.encodeproject.org/files/ENCFF765ZVU/@@download/ENCFF765ZVU.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF708PBZ bigBed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF891QTR 13383361 ENCODE Processing Pipeline b31787ad794a3d72487abb3da8887f2b https://www.encodeproject.org/files/ENCFF708PBZ/@@download/ENCFF708PBZ.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF712GEQ bed narrowPeak conservative idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF220UJA, ENCFF258YCI, ENCFF419RSJ, ENCFF891QTR 255544 ENCODE Processing Pipeline d204ffcab93fcab5a58daf5ebacfaf70 https://www.encodeproject.org/files/ENCFF712GEQ/@@download/ENCFF712GEQ.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF220UJA bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF314OQP, ENCFF836OEO 6077612 ENCODE Processing Pipeline e8b679ead2b7957fcd533951f297e073 https://www.encodeproject.org/files/ENCFF220UJA/@@download/ENCFF220UJA.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF891QTR bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF154YTN, ENCFF314OQP, ENCFF836OEO 6235739 ENCODE Processing Pipeline 27212a268b47e11e2cf376ecb5f0b471 https://www.encodeproject.org/files/ENCFF891QTR/@@download/ENCFF891QTR.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF258YCI bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF154YTN, ENCFF836OEO 1811778 ENCODE Processing Pipeline 681fe5f239a1ff29b4023defd9d37409 https://www.encodeproject.org/files/ENCFF258YCI/@@download/ENCFF258YCI.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF179TKE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF712GEQ 529574 ENCODE Processing Pipeline aa71a45c7885c7d6e3dc0867815fc3bd https://www.encodeproject.org/files/ENCFF179TKE/@@download/ENCFF179TKE.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF813LOW bed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF220UJA, ENCFF258YCI, ENCFF419RSJ, ENCFF891QTR 415368 ENCODE Processing Pipeline 8163db7fab7a18aae4396d2cc750b4c1 https://www.encodeproject.org/files/ENCFF813LOW/@@download/ENCFF813LOW.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF082XMZ fastq reads ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 1 50 single-ended 1860289356 Richard Myers, HAIB bd7647e36f43aceea44b537837ea01e6 SRA:SRR5339025 https://www.encodeproject.org/files/ENCFF082XMZ/@@download/ENCFF082XMZ.fastq.gz HiSeq 2000 /files/ENCFF963TEZ/ released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF638ZSQ fastq reads ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 1 50 single-ended 1189060664 Richard Myers, HAIB c1ce882458544b321351ba94cfbeb8cb SRA:SRR5339024 https://www.encodeproject.org/files/ENCFF638ZSQ/@@download/ENCFF638ZSQ.fastq.gz HiSeq 2000 /files/ENCFF564XPO/ released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF761LNM bam alignments ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 50 ENCFF638ZSQ, ENCFF643CGH 791308528 ENCODE Processing Pipeline d22749b8b1781295168d79cc154d0fe1 https://www.encodeproject.org/files/ENCFF761LNM/@@download/ENCFF761LNM.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF719YYF bam unfiltered alignments ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 50 ENCFF082XMZ, ENCFF643CGH 1698875040 ENCODE Processing Pipeline 7e7f524d18b30c3f5a4d3853484212dd https://www.encodeproject.org/files/ENCFF719YYF/@@download/ENCFF719YYF.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF389GTE bam unfiltered alignments ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 50 ENCFF082XMZ, ENCFF807MUK 1695303716 ENCODE Processing Pipeline 40178f55d50a74dd45dd5dcf588e61f2 https://www.encodeproject.org/files/ENCFF389GTE/@@download/ENCFF389GTE.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF186KYZ bam alignments ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 50 ENCFF082XMZ, ENCFF807MUK 589973230 ENCODE Processing Pipeline d148188c1e9aba56f5520e6182d3cfa7 https://www.encodeproject.org/files/ENCFF186KYZ/@@download/ENCFF186KYZ.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF225QQB bam unfiltered alignments ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 50 ENCFF638ZSQ, ENCFF643CGH 1165912253 ENCODE Processing Pipeline c7a33fd77e21833e9994248ddd60afa5 https://www.encodeproject.org/files/ENCFF225QQB/@@download/ENCFF225QQB.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF665IFS bam unfiltered alignments ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 50 ENCFF638ZSQ, ENCFF807MUK 1163680212 ENCODE Processing Pipeline 94955e4172e980649113b9bf87326d96 https://www.encodeproject.org/files/ENCFF665IFS/@@download/ENCFF665IFS.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF121VXJ bam alignments ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 50 ENCFF638ZSQ, ENCFF807MUK 791329952 ENCODE Processing Pipeline da755cceba8e88abc0f5e3bd3d257db8 https://www.encodeproject.org/files/ENCFF121VXJ/@@download/ENCFF121VXJ.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF302HOU bam alignments ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 50 ENCFF082XMZ, ENCFF643CGH 589904002 ENCODE Processing Pipeline 2ab751ca96a94de9f62e9bcc76e9425b https://www.encodeproject.org/files/ENCFF302HOU/@@download/ENCFF302HOU.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF958OWT bigWig signal p-value ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 ENCFF121VXJ, ENCFF829HKP 470167511 ENCODE Processing Pipeline 9b79b6d45532eb2f02a642166cde30e0 https://www.encodeproject.org/files/ENCFF958OWT/@@download/ENCFF958OWT.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF457SWI bigWig fold change over control ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 ENCFF121VXJ, ENCFF829HKP 351227943 ENCODE Processing Pipeline e4e10e2915a73ba4dbc0b8872192f1ca https://www.encodeproject.org/files/ENCFF457SWI/@@download/ENCFF457SWI.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF119HQF bed narrowPeak conservative idr thresholded peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF001TDO, ENCFF263PBF, ENCFF682TFX, ENCFF721XMZ 956803 ENCODE Processing Pipeline 46a96b5c6eeaf91807aa642de8a788ac https://www.encodeproject.org/files/ENCFF119HQF/@@download/ENCFF119HQF.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF176LVN bigWig signal p-value ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF121VXJ, ENCFF186KYZ, ENCFF829HKP, ENCFF876ZSM 812724557 ENCODE Processing Pipeline 9c0f38b54926dfea5c77b2b1ea15de01 https://www.encodeproject.org/files/ENCFF176LVN/@@download/ENCFF176LVN.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF145FTP bigBed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF263PBF 12013450 ENCODE Processing Pipeline 2f259f921882232e1a7baf68420cb4be https://www.encodeproject.org/files/ENCFF145FTP/@@download/ENCFF145FTP.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF025LLL bigBed narrowPeak optimal idr thresholded peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF693PZH 1713981 ENCODE Processing Pipeline a88703a130d4340755e2cdae78165142 https://www.encodeproject.org/files/ENCFF025LLL/@@download/ENCFF025LLL.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF564ZUD bigWig signal p-value ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 ENCFF186KYZ, ENCFF876ZSM 428636787 ENCODE Processing Pipeline 8ad99d28387ef39a952c57f59b400e26 https://www.encodeproject.org/files/ENCFF564ZUD/@@download/ENCFF564ZUD.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF263PBF bed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF121VXJ, ENCFF186KYZ, ENCFF829HKP, ENCFF876ZSM 5424258 ENCODE Processing Pipeline 74532065217057f0b6ba5b38e6a21c7f https://www.encodeproject.org/files/ENCFF263PBF/@@download/ENCFF263PBF.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF284REP bigWig fold change over control ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF121VXJ, ENCFF186KYZ, ENCFF829HKP, ENCFF876ZSM 647596870 ENCODE Processing Pipeline 344ecda27db29b103d9f17a3b58e2f73 https://www.encodeproject.org/files/ENCFF284REP/@@download/ENCFF284REP.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF721XMZ bed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 ENCFF186KYZ, ENCFF876ZSM 4478670 ENCODE Processing Pipeline bc76f2eab44b0aa0ed65b9105e5c573a https://www.encodeproject.org/files/ENCFF721XMZ/@@download/ENCFF721XMZ.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF093LZV bigBed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 ENCFF721XMZ 10903780 ENCODE Processing Pipeline 3953a3fd494732f95a26a92f91d90e51 https://www.encodeproject.org/files/ENCFF093LZV/@@download/ENCFF093LZV.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF106QRP bigWig fold change over control ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 ENCFF186KYZ, ENCFF876ZSM 258863927 ENCODE Processing Pipeline a6ee1b45bd302e737d469b1ac833c734 https://www.encodeproject.org/files/ENCFF106QRP/@@download/ENCFF106QRP.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF682TFX bed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 ENCFF121VXJ, ENCFF829HKP 4536822 ENCODE Processing Pipeline 898addb82a3a00236f8dd5143bea2588 https://www.encodeproject.org/files/ENCFF682TFX/@@download/ENCFF682TFX.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF119UDS bigBed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 ENCFF682TFX 11109005 ENCODE Processing Pipeline 1946a7180451cc6d08bd4b30b6abc539 https://www.encodeproject.org/files/ENCFF119UDS/@@download/ENCFF119UDS.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF693PZH bed narrowPeak optimal idr thresholded peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF001TDO, ENCFF263PBF, ENCFF682TFX, ENCFF721XMZ 956798 ENCODE Processing Pipeline 204ad61bcdc9e26628e1deafb30a2fed https://www.encodeproject.org/files/ENCFF693PZH/@@download/ENCFF693PZH.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF827JLH bigWig signal p-value ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 ENCFF389HKQ, ENCFF761LNM 471921684 ENCODE Processing Pipeline 2c1ff0584bcaad9fd093eb422007ef09 https://www.encodeproject.org/files/ENCFF827JLH/@@download/ENCFF827JLH.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF969EJJ bigWig signal p-value ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 ENCFF302HOU, ENCFF802YSD 425531676 ENCODE Processing Pipeline eb2c7ff932c4584e4ac61055346265d8 https://www.encodeproject.org/files/ENCFF969EJJ/@@download/ENCFF969EJJ.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF095LSE bigWig signal p-value ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF302HOU, ENCFF389HKQ, ENCFF761LNM, ENCFF802YSD 871725762 ENCODE Processing Pipeline 0683fdee87f26150b248ac7443e81b8a https://www.encodeproject.org/files/ENCFF095LSE/@@download/ENCFF095LSE.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF795CNP bigWig fold change over control ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 ENCFF389HKQ, ENCFF761LNM 350114495 ENCODE Processing Pipeline 9d4e32313ea9fcc18ba311e0279a5f31 https://www.encodeproject.org/files/ENCFF795CNP/@@download/ENCFF795CNP.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF623DEH bigWig fold change over control ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 ENCFF302HOU, ENCFF802YSD 258753644 ENCODE Processing Pipeline 593bec798e3b40d84656e3782dbafdfe https://www.encodeproject.org/files/ENCFF623DEH/@@download/ENCFF623DEH.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF205ZOQ bigWig fold change over control ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF302HOU, ENCFF389HKQ, ENCFF761LNM, ENCFF802YSD 644977396 ENCODE Processing Pipeline d6d74d11d6ce39014a7bec803bb35b0e https://www.encodeproject.org/files/ENCFF205ZOQ/@@download/ENCFF205ZOQ.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF900CAV bed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 ENCFF302HOU, ENCFF802YSD 4346402 ENCODE Processing Pipeline 4b8eb3d0b1c635cbe68f6b31a224efe4 https://www.encodeproject.org/files/ENCFF900CAV/@@download/ENCFF900CAV.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF979JFX bed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 ENCFF389HKQ, ENCFF761LNM 4438714 ENCODE Processing Pipeline d2a2473b35cd1fda5f822b41de2373f1 https://www.encodeproject.org/files/ENCFF979JFX/@@download/ENCFF979JFX.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF810LRZ bed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF302HOU, ENCFF389HKQ, ENCFF761LNM, ENCFF802YSD 5310747 ENCODE Processing Pipeline 5a18df8de13a1b786d78349e409ed453 https://www.encodeproject.org/files/ENCFF810LRZ/@@download/ENCFF810LRZ.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF590PHE bigBed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1 ENCFF979JFX 10901717 ENCODE Processing Pipeline eb05ac26a67e65109492226855a6c11f https://www.encodeproject.org/files/ENCFF590PHE/@@download/ENCFF590PHE.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF973ZPF bigBed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 2 ENCFF900CAV 10683551 ENCODE Processing Pipeline ffb7012b58bc29b1b266618c3ee4b4aa https://www.encodeproject.org/files/ENCFF973ZPF/@@download/ENCFF973ZPF.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF424UCZ bigBed narrowPeak peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF810LRZ 11919440 ENCODE Processing Pipeline 3ada51cd28a21f8bb86580208ddc5134 https://www.encodeproject.org/files/ENCFF424UCZ/@@download/ENCFF424UCZ.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF904CNB bed narrowPeak optimal idr thresholded peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF810LRZ, ENCFF900CAV, ENCFF979JFX 966706 ENCODE Processing Pipeline d8d35f60b4d608a0884deb085b87c222 https://www.encodeproject.org/files/ENCFF904CNB/@@download/ENCFF904CNB.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF213BLR bigBed narrowPeak optimal idr thresholded peaks ENCSR619IUE ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate CTCF-human ENCAB247TYO DNA False 2016-10-27 ENCODE 1, 2 ENCFF904CNB 1729535 ENCODE Processing Pipeline d918aba1b36b0835bf73a8f8f8d4a97b https://www.encodeproject.org/files/ENCFF213BLR/@@download/ENCFF213BLR.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample, NTR biosample ENCFF668SGW fastq reads ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF400DAT 2533519146 Richard Myers, HAIB 897a99925bc985511bb6ff71d9cf9b4c https://www.encodeproject.org/files/ENCFF668SGW/@@download/ENCFF668SGW.fastq.gz HiSeq 2000 /files/ENCFF147IQP/ released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF400DAT fastq reads ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF668SGW 2639066955 Richard Myers, HAIB 65ceed712df4b230479ca5568b07e9e1 https://www.encodeproject.org/files/ENCFF400DAT/@@download/ENCFF400DAT.fastq.gz HiSeq 2000 /files/ENCFF920XCV/ released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF315PLV bam unfiltered alignments ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF400DAT, ENCFF668SGW, ENCFF807MUK 3873273045 ENCODE Processing Pipeline 0b2cc0b54b4dab35d6baa97c17b15aa2 https://www.encodeproject.org/files/ENCFF315PLV/@@download/ENCFF315PLV.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF475DIE bam alignments ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF400DAT, ENCFF668SGW, ENCFF807MUK 2695214539 ENCODE Processing Pipeline a2541a9fa00351c3cc99f41dcd39a44d https://www.encodeproject.org/files/ENCFF475DIE/@@download/ENCFF475DIE.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF810WVE bam unfiltered alignments ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF400DAT, ENCFF643CGH, ENCFF668SGW 3865419479 ENCODE Processing Pipeline 17559e9d8b4c93d63651fcef34d44210 https://www.encodeproject.org/files/ENCFF810WVE/@@download/ENCFF810WVE.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF516ZKN bam alignments ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF400DAT, ENCFF643CGH, ENCFF668SGW 2698944814 ENCODE Processing Pipeline 3a1de7f7e06848e371ba9214dc5051c1 https://www.encodeproject.org/files/ENCFF516ZKN/@@download/ENCFF516ZKN.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF204IHN bigWig fold change over control ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF475DIE, ENCFF836OQZ 876505747 ENCODE Processing Pipeline d2d6eb6a4a00f8915a8fe42a8b1357ca https://www.encodeproject.org/files/ENCFF204IHN/@@download/ENCFF204IHN.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF580UPS bigWig signal p-value ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF475DIE, ENCFF836OQZ 1029722340 ENCODE Processing Pipeline 28db228997b2ae8ce794e963737fd2f5 https://www.encodeproject.org/files/ENCFF580UPS/@@download/ENCFF580UPS.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF849VCH bigBed narrowPeak peaks ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF402UYK 12953546 ENCODE Processing Pipeline 2f77b2016a7bb818221b455a051f8689 https://www.encodeproject.org/files/ENCFF849VCH/@@download/ENCFF849VCH.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF402UYK bed narrowPeak peaks ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF475DIE, ENCFF836OQZ 6636011 ENCODE Processing Pipeline f3b587fb395d44961524030474be4da7 https://www.encodeproject.org/files/ENCFF402UYK/@@download/ENCFF402UYK.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF573IAI bigWig signal p-value ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF286CKM, ENCFF516ZKN 991018198 ENCODE Processing Pipeline c2551df5d55bee74b5510ebeaeda5f34 https://www.encodeproject.org/files/ENCFF573IAI/@@download/ENCFF573IAI.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF226MKP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF402UYK 687343 ENCODE Processing Pipeline 2f8dba39cc17cc228df0ba4b8f29fef7 https://www.encodeproject.org/files/ENCFF226MKP/@@download/ENCFF226MKP.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF487VCU bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF226MKP 1300847 ENCODE Processing Pipeline d87819c9a7f8f1b189bab13c260f2313 https://www.encodeproject.org/files/ENCFF487VCU/@@download/ENCFF487VCU.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF625NNB bigBed narrowPeak peaks ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF114ZFU 13164725 ENCODE Processing Pipeline c2b0d8b24a9c9287c7c5bfb789564a19 https://www.encodeproject.org/files/ENCFF625NNB/@@download/ENCFF625NNB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF140PJT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF163OSZ 1366534 ENCODE Processing Pipeline 1612e65ed66f671d200ec74e048b1683 https://www.encodeproject.org/files/ENCFF140PJT/@@download/ENCFF140PJT.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF163OSZ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF114ZFU, ENCFF419RSJ 722749 ENCODE Processing Pipeline f75e6ec9a9cb5feb18ab9a6303f44207 https://www.encodeproject.org/files/ENCFF163OSZ/@@download/ENCFF163OSZ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF695KSV bigWig fold change over control ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF286CKM, ENCFF516ZKN 860804520 ENCODE Processing Pipeline 4bca86b8466e9f982a1ccce8c0fc1cc1 https://www.encodeproject.org/files/ENCFF695KSV/@@download/ENCFF695KSV.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF114ZFU bed narrowPeak peaks ENCSR442CIF ChIP-seq UBERON:0002367 prostate gland tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF286CKM, ENCFF516ZKN 6772525 ENCODE Processing Pipeline 2fa839a6c56e22423ece80c29f7c7450 https://www.encodeproject.org/files/ENCFF114ZFU/@@download/ENCFF114ZFU.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF644XXX fastq reads ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF754KUW 2499342039 Richard Myers, HAIB 7c1c406958d8c342902a95dee728f9fb SRA:SRR6213497 https://www.encodeproject.org/files/ENCFF644XXX/@@download/ENCFF644XXX.fastq.gz HiSeq 2000 /files/ENCFF963KVX/ released antibody characterized with exemption ENCFF754KUW fastq reads ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF644XXX 2603918476 Richard Myers, HAIB ab4b28b2508c154c5b76be2bcc36ae82 SRA:SRR6213497 https://www.encodeproject.org/files/ENCFF754KUW/@@download/ENCFF754KUW.fastq.gz HiSeq 2000 /files/ENCFF320JDA/ released antibody characterized with exemption ENCFF131NUF bam unfiltered alignments ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF644XXX, ENCFF754KUW, ENCFF807MUK 6054924997 ENCODE Processing Pipeline 8715ae6d91c40d68e356d7ca5276569e https://www.encodeproject.org/files/ENCFF131NUF/@@download/ENCFF131NUF.bam hg19 released antibody characterized with exemption ENCFF677JZD bam alignments ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF644XXX, ENCFF754KUW, ENCFF807MUK 4544080665 ENCODE Processing Pipeline 056cf7114e1a1651dde3f0d01b2d76d2 https://www.encodeproject.org/files/ENCFF677JZD/@@download/ENCFF677JZD.bam hg19 released antibody characterized with exemption ENCFF959BPW bam alignments ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF644XXX, ENCFF754KUW 4548438620 ENCODE Processing Pipeline 9e40f0bf9305ba55784c40c0c11d160d https://www.encodeproject.org/files/ENCFF959BPW/@@download/ENCFF959BPW.bam GRCh38 released antibody characterized with exemption ENCFF799DKV bam unfiltered alignments ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF644XXX, ENCFF754KUW 6079592356 ENCODE Processing Pipeline d20e0ccc4dc93e758b7e841107ea416d https://www.encodeproject.org/files/ENCFF799DKV/@@download/ENCFF799DKV.bam GRCh38 released antibody characterized with exemption ENCFF094GOG bigWig signal p-value ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF959BPW 1282136868 ENCODE Processing Pipeline dac6bad3e8fa4a33c52e2530bdf601f4 https://www.encodeproject.org/files/ENCFF094GOG/@@download/ENCFF094GOG.bigWig GRCh38 released antibody characterized with exemption ENCFF913NGH bed narrowPeak peaks ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF959BPW 6354728 ENCODE Processing Pipeline 4fcac3b48b7d80f23e7bbf569ccc7891 https://www.encodeproject.org/files/ENCFF913NGH/@@download/ENCFF913NGH.bed.gz GRCh38 released antibody characterized with exemption ENCFF285GEA bigWig fold change over control ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF959BPW 1545844472 ENCODE Processing Pipeline 11596ac600353772946b44322386083f https://www.encodeproject.org/files/ENCFF285GEA/@@download/ENCFF285GEA.bigWig GRCh38 released antibody characterized with exemption ENCFF287SLI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF913NGH 114903 ENCODE Processing Pipeline ef99816f340c90684e5990282deaaae8 https://www.encodeproject.org/files/ENCFF287SLI/@@download/ENCFF287SLI.bed.gz GRCh38 released antibody characterized with exemption ENCFF004LRJ bigBed narrowPeak peaks ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF913NGH 11674251 ENCODE Processing Pipeline 283a84b0450b253ed3a964fec4544b45 https://www.encodeproject.org/files/ENCFF004LRJ/@@download/ENCFF004LRJ.bigBed GRCh38 released antibody characterized with exemption ENCFF735PFX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF287SLI 285184 ENCODE Processing Pipeline 582c9105ed07db58468cb698b750497c https://www.encodeproject.org/files/ENCFF735PFX/@@download/ENCFF735PFX.bigBed GRCh38 released antibody characterized with exemption ENCFF729MZG bigWig signal p-value ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF677JZD 1433495494 ENCODE Processing Pipeline e08a8c153510f398e8cac29e5d6649bf https://www.encodeproject.org/files/ENCFF729MZG/@@download/ENCFF729MZG.bigWig hg19 released antibody characterized with exemption ENCFF614IMK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF739FWZ 115482 ENCODE Processing Pipeline 3c18ad5b79e4c5f3da1d43034a750fc0 https://www.encodeproject.org/files/ENCFF614IMK/@@download/ENCFF614IMK.bed.gz hg19 released antibody characterized with exemption ENCFF385LNT bigBed narrowPeak peaks ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF739FWZ 11659372 ENCODE Processing Pipeline 5b5420780b8aef751663ed0b11a71e69 https://www.encodeproject.org/files/ENCFF385LNT/@@download/ENCFF385LNT.bigBed hg19 released antibody characterized with exemption ENCFF744VAK bigWig fold change over control ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF677JZD 1544169740 ENCODE Processing Pipeline 964a12ed055d2930a6eab7ad39f75711 https://www.encodeproject.org/files/ENCFF744VAK/@@download/ENCFF744VAK.bigWig hg19 released antibody characterized with exemption ENCFF739FWZ bed narrowPeak peaks ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF677JZD 6349292 ENCODE Processing Pipeline 22d0680342d65f727917705d65ed0e92 https://www.encodeproject.org/files/ENCFF739FWZ/@@download/ENCFF739FWZ.bed.gz hg19 released antibody characterized with exemption ENCFF925YJF bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR360BLQ ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF614IMK 283713 ENCODE Processing Pipeline ce92bdf78066a86c622fd9ccf84b38c5 https://www.encodeproject.org/files/ENCFF925YJF/@@download/ENCFF925YJF.bigBed hg19 released antibody characterized with exemption ENCFF000NXM bam alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NYB 1793789274 Richard Myers, HAIB 150f127a253c3ae3ae2c79bcb22f97cf https://www.encodeproject.org/files/ENCFF000NXM/@@download/ENCFF000NXM.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NXN bigBed broadPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TXO 672787 Richard Myers, HAIB acd316aee41780fc3490e501beb67d6d https://www.encodeproject.org/files/ENCFF000NXN/@@download/ENCFF000NXN.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NXO bigBed broadPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TXP 690892 Richard Myers, HAIB b0f7827d80fdc9f02edf4cea0c80ec86 https://www.encodeproject.org/files/ENCFF000NXO/@@download/ENCFF000NXO.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NXP bam alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NXW 1541117968 Richard Myers, HAIB cd2273241d494c7d85eed3d3bb1ed3f0 https://www.encodeproject.org/files/ENCFF000NXP/@@download/ENCFF000NXP.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NXQ bigWig raw signal ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 1 22069294 Richard Myers, HAIB 588d0af7e5a011d462c60643cc716f57 https://www.encodeproject.org/files/ENCFF000NXQ/@@download/ENCFF000NXQ.bigWig hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF000NXR bigWig raw signal ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 1 20743323 Richard Myers, HAIB e7789cf4a9b3b8a5a892ccb99d51b430 https://www.encodeproject.org/files/ENCFF000NXR/@@download/ENCFF000NXR.bigWig hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF000NXW fastq reads ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1537635698 Richard Myers, HAIB c5c0b75d1b400ac5ecf1f31a4a528844 https://www.encodeproject.org/files/ENCFF000NXW/@@download/ENCFF000NXW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NYB fastq reads ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1799863527 Richard Myers, HAIB 12757dc74251a44922d836a50f5ea382 https://www.encodeproject.org/files/ENCFF000NYB/@@download/ENCFF000NYB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF001TXO bed broadPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 1 329953 Richard Myers, HAIB 647e9072151aec4f235e617c86835b73 https://www.encodeproject.org/files/ENCFF001TXO/@@download/ENCFF001TXO.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF001TXP bed broadPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 1 359974 Richard Myers, HAIB 28e17e60df32b13264ab6d21de9e8b10 https://www.encodeproject.org/files/ENCFF001TXP/@@download/ENCFF001TXP.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF002CHF bed narrowPeak optimal idr thresholded peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 234700 ENCODE Consortium Analysis Working Group e86ad868e90ad5be56aa38b8f5cd3ab1 https://www.encodeproject.org/files/ENCFF002CHF/@@download/ENCFF002CHF.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF873PNY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE ENCFF002CHF 533481 ENCODE Consortium ec8f10f55c255466af71f1c29998bdf8 https://www.encodeproject.org/files/ENCFF873PNY/@@download/ENCFF873PNY.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF922QNO bam unfiltered alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NXW, ENCFF643CGH 1670764871 ENCODE Processing Pipeline 444d9209cad2323cc854c2f7648b6141 https://www.encodeproject.org/files/ENCFF922QNO/@@download/ENCFF922QNO.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF983YCI bam alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NXW, ENCFF643CGH 1016241355 ENCODE Processing Pipeline 2430c20788da57425b0d39fe6b214da6 https://www.encodeproject.org/files/ENCFF983YCI/@@download/ENCFF983YCI.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF207QTV bam alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYB, ENCFF643CGH 1171354888 ENCODE Processing Pipeline 972d699532b32b05425ab4c48a1393ab https://www.encodeproject.org/files/ENCFF207QTV/@@download/ENCFF207QTV.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF414CDS bam unfiltered alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYB, ENCFF643CGH 1935414200 ENCODE Processing Pipeline 797114f45d8b95db32b87309578ec7dd https://www.encodeproject.org/files/ENCFF414CDS/@@download/ENCFF414CDS.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF224MHM bam unfiltered alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NXW, ENCFF807MUK 1670191507 ENCODE Processing Pipeline 3fda2c8563235a278cb5b9ce9f636311 https://www.encodeproject.org/files/ENCFF224MHM/@@download/ENCFF224MHM.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF214RUL bam alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NXW, ENCFF807MUK 1009716777 ENCODE Processing Pipeline 17cc91e4ed261e46815cf9cd818e46b9 https://www.encodeproject.org/files/ENCFF214RUL/@@download/ENCFF214RUL.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF991DJH bam unfiltered alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYB, ENCFF807MUK 1934516312 ENCODE Processing Pipeline f67020b6d8941941893528626e8b9d54 https://www.encodeproject.org/files/ENCFF991DJH/@@download/ENCFF991DJH.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF867LOD bam alignments ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYB, ENCFF807MUK 1164055608 ENCODE Processing Pipeline 300ab185e0711db6216286eece31479d https://www.encodeproject.org/files/ENCFF867LOD/@@download/ENCFF867LOD.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF513WJY bigWig signal p-value ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF207QTV, ENCFF537DAJ, ENCFF983YCI 840000071 ENCODE Processing Pipeline f023e211a21c22574b8301e59d7c0d9a https://www.encodeproject.org/files/ENCFF513WJY/@@download/ENCFF513WJY.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF599BQZ bigWig signal p-value ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF983YCI 649705642 ENCODE Processing Pipeline 3907bd4253beafbd3c1a47186ee84a75 https://www.encodeproject.org/files/ENCFF599BQZ/@@download/ENCFF599BQZ.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF255XOJ bigWig fold change over control ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF983YCI 546590319 ENCODE Processing Pipeline 879afe4a423e4ccb75a73f70509d30b8 https://www.encodeproject.org/files/ENCFF255XOJ/@@download/ENCFF255XOJ.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF526YEF bigWig signal p-value ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 ENCFF207QTV, ENCFF537DAJ 598205910 ENCODE Processing Pipeline 90a7430493e037f34e93cd846d13e0e3 https://www.encodeproject.org/files/ENCFF526YEF/@@download/ENCFF526YEF.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF564YOV bigWig fold change over control ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF207QTV, ENCFF537DAJ, ENCFF983YCI 930211762 ENCODE Processing Pipeline a897b53920cd4c6a97ee35eaa7304fa4 https://www.encodeproject.org/files/ENCFF564YOV/@@download/ENCFF564YOV.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF478YBA bed narrowPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 ENCFF207QTV, ENCFF537DAJ 6792504 ENCODE Processing Pipeline 63f519c2c22d0909a9d08c187b776da3 https://www.encodeproject.org/files/ENCFF478YBA/@@download/ENCFF478YBA.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF370SOF bed narrowPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF207QTV, ENCFF537DAJ, ENCFF983YCI 7127201 ENCODE Processing Pipeline aa9585c6eb71c02edb3287e5ab6abd30 https://www.encodeproject.org/files/ENCFF370SOF/@@download/ENCFF370SOF.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF450EDU bed narrowPeak conservative idr thresholded peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF370SOF, ENCFF419RSJ, ENCFF478YBA, ENCFF755GLO 238769 ENCODE Processing Pipeline d06509918f86269cddec7c4b00468033 https://www.encodeproject.org/files/ENCFF450EDU/@@download/ENCFF450EDU.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF108NRH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF138ZBJ 556891 ENCODE Processing Pipeline 7ac64a34d2b55c11668d5e406af6fff3 https://www.encodeproject.org/files/ENCFF108NRH/@@download/ENCFF108NRH.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF025EHI bigWig fold change over control ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 ENCFF207QTV, ENCFF537DAJ 592070421 ENCODE Processing Pipeline 838191504c574c0b86a679d5f85cb520 https://www.encodeproject.org/files/ENCFF025EHI/@@download/ENCFF025EHI.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF599QSP bigBed narrowPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1 ENCFF478YBA 12740099 ENCODE Processing Pipeline 9ef9d61e4b8f206dd9791c5eeacf11b0 https://www.encodeproject.org/files/ENCFF599QSP/@@download/ENCFF599QSP.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF755GLO bed narrowPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF983YCI 6873880 ENCODE Processing Pipeline 6aaf1b2667300cde29a940eec5779d2f https://www.encodeproject.org/files/ENCFF755GLO/@@download/ENCFF755GLO.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF703GDL bigBed narrowPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 2 ENCFF755GLO 12396640 ENCODE Processing Pipeline 84f432bf012df13146cfd2998fc96f51 https://www.encodeproject.org/files/ENCFF703GDL/@@download/ENCFF703GDL.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF126PVU bigBed narrowPeak peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF370SOF 12444332 ENCODE Processing Pipeline 4568637ecc5577d68407cf073bd98698 https://www.encodeproject.org/files/ENCFF126PVU/@@download/ENCFF126PVU.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF362CDO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF450EDU 503070 ENCODE Processing Pipeline 4018fa8cd5aec1506f1da320229eb864 https://www.encodeproject.org/files/ENCFF362CDO/@@download/ENCFF362CDO.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF138ZBJ bed narrowPeak optimal idr thresholded peaks ENCSR000BQL ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFATC1-human ENCAB000AJE DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF370SOF, ENCFF419RSJ, ENCFF478YBA, ENCFF755GLO 273181 ENCODE Processing Pipeline 6f202f1275baafd31b76d9db26cebdf0 https://www.encodeproject.org/files/ENCFF138ZBJ/@@download/ENCFF138ZBJ.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QUY bam alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QVH 92931263 Richard Myers, HAIB 9fb67e1e033d9e4dd5c778e20093ffb0 https://www.encodeproject.org/files/ENCFF000QUY/@@download/ENCFF000QUY.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QUZ bigBed broadPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UOP 1220391 Richard Myers, HAIB 9084e58468d75bc3cd5e1491dc81d564 https://www.encodeproject.org/files/ENCFF000QUZ/@@download/ENCFF000QUZ.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QVA bam alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QVL 136353977 Richard Myers, HAIB 0e5fdce14f1a5d5b78058aa67ca05922 https://www.encodeproject.org/files/ENCFF000QVA/@@download/ENCFF000QVA.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QVB bigBed broadPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UOQ 557926 Richard Myers, HAIB 881d8d2ff7e10b13a274a9f06dc0216e https://www.encodeproject.org/files/ENCFF000QVB/@@download/ENCFF000QVB.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QVD bigWig raw signal ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 47395006 Richard Myers, HAIB f9ece9d7d2125422c45659c6299669f3 https://www.encodeproject.org/files/ENCFF000QVD/@@download/ENCFF000QVD.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000QVF bigWig raw signal ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 25021664 Richard Myers, HAIB 612758fd59adfc4d0a6541cb1f473784 https://www.encodeproject.org/files/ENCFF000QVF/@@download/ENCFF000QVF.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000QVH fastq reads ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 868882886 Richard Myers, HAIB ffbe5d4bdcd239aa546d27934ea0ec43 https://www.encodeproject.org/files/ENCFF000QVH/@@download/ENCFF000QVH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QVY/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QVL fastq reads ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1146513051 Richard Myers, HAIB 6462366a2d4b0292a3d35e98b310c988 https://www.encodeproject.org/files/ENCFF000QVL/@@download/ENCFF000QVL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QVY/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UOP bed broadPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 612884 Richard Myers, HAIB 449f4b3e7528b6554c5a8b025086df82 https://www.encodeproject.org/files/ENCFF001UOP/@@download/ENCFF001UOP.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UOQ bed broadPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 299462 Richard Myers, HAIB 40c7c3fc8710fd30ec8629fd3fdb3514 https://www.encodeproject.org/files/ENCFF001UOQ/@@download/ENCFF001UOQ.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF032VMC bam unfiltered alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QVH, ENCFF643CGH 1096838853 ENCODE Processing Pipeline 9018453f418d2800990d41cf892ca4d0 https://www.encodeproject.org/files/ENCFF032VMC/@@download/ENCFF032VMC.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF494RSA bam alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QVH, ENCFF643CGH 653576806 ENCODE Processing Pipeline f2cb94a9f27e7eec4db483a57efd0643 https://www.encodeproject.org/files/ENCFF494RSA/@@download/ENCFF494RSA.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF860ZYU bam unfiltered alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QVL, ENCFF643CGH 1164954746 ENCODE Processing Pipeline 460858301fa6b1e138b3ec95ea565c8e https://www.encodeproject.org/files/ENCFF860ZYU/@@download/ENCFF860ZYU.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF832DKY bam alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QVL, ENCFF643CGH 543248639 ENCODE Processing Pipeline b7d8e73dfda4bda772afaa768492795c https://www.encodeproject.org/files/ENCFF832DKY/@@download/ENCFF832DKY.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF484QIQ bam unfiltered alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QVL, ENCFF807MUK 1162768980 ENCODE Processing Pipeline 3fe59dd664be7dfe45f4019d9761f589 https://www.encodeproject.org/files/ENCFF484QIQ/@@download/ENCFF484QIQ.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF264WMS bam unfiltered alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QVH, ENCFF807MUK 1095859646 ENCODE Processing Pipeline 4a403099f23dec23c2a9d2ba9a64b55d https://www.encodeproject.org/files/ENCFF264WMS/@@download/ENCFF264WMS.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF020MRS bam alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QVL, ENCFF807MUK 543743786 ENCODE Processing Pipeline 31a256e4eed32c79ae9a30e245fb7140 https://www.encodeproject.org/files/ENCFF020MRS/@@download/ENCFF020MRS.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF441SQQ bam alignments ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QVH, ENCFF807MUK 654225187 ENCODE Processing Pipeline 08dff2f41f210bfe945533fb0a9cbd59 https://www.encodeproject.org/files/ENCFF441SQQ/@@download/ENCFF441SQQ.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF164JXM bigWig fold change over control ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421EKC, ENCFF832DKY 237815994 ENCODE Processing Pipeline 52518e2afa5ce32aee5619da313bf28c https://www.encodeproject.org/files/ENCFF164JXM/@@download/ENCFF164JXM.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF785YQI bed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF421EKC, ENCFF494RSA, ENCFF832DKY 6802071 ENCODE Processing Pipeline 9e988aee6e115991c72a5ba4549f7b20 https://www.encodeproject.org/files/ENCFF785YQI/@@download/ENCFF785YQI.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF467NHL bigWig signal p-value ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF421EKC, ENCFF494RSA 326227298 ENCODE Processing Pipeline 0afc5103255e80425d1d05f11010d686 https://www.encodeproject.org/files/ENCFF467NHL/@@download/ENCFF467NHL.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF175DMT bigWig signal p-value ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421EKC, ENCFF832DKY 268647024 ENCODE Processing Pipeline 101bf575c387f330d8977867f5ea711a https://www.encodeproject.org/files/ENCFF175DMT/@@download/ENCFF175DMT.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF007PNW bed narrowPeak conservative idr thresholded peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF003VGG, ENCFF109VVN, ENCFF419RSJ, ENCFF785YQI 375156 ENCODE Processing Pipeline 3291564ed0d3caaa7d115114aa4e20aa https://www.encodeproject.org/files/ENCFF007PNW/@@download/ENCFF007PNW.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF238OET bigWig fold change over control ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF421EKC, ENCFF494RSA, ENCFF832DKY 432700640 ENCODE Processing Pipeline c5ba8b7848d1814e4902592adc69e38c https://www.encodeproject.org/files/ENCFF238OET/@@download/ENCFF238OET.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF056ROO bigBed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF003VGG 12016923 ENCODE Processing Pipeline 79892fbda1cac348e9d9f545f32f6c81 https://www.encodeproject.org/files/ENCFF056ROO/@@download/ENCFF056ROO.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF331ZMN bigBed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF785YQI 12044539 ENCODE Processing Pipeline e57629491d1772f58ff39c889e513536 https://www.encodeproject.org/files/ENCFF331ZMN/@@download/ENCFF331ZMN.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF071RRH bigWig signal p-value ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF421EKC, ENCFF494RSA, ENCFF832DKY 311385723 ENCODE Processing Pipeline b08fb0b70754e3780b35163837d5445d https://www.encodeproject.org/files/ENCFF071RRH/@@download/ENCFF071RRH.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF333SWB bigWig fold change over control ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF421EKC, ENCFF494RSA 267840711 ENCODE Processing Pipeline d0b35779a902c256142cc4ef71902e69 https://www.encodeproject.org/files/ENCFF333SWB/@@download/ENCFF333SWB.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF109VVN bed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421EKC, ENCFF832DKY 6107471 ENCODE Processing Pipeline fc07bc023fbc91f150b3e8fdf648e82c https://www.encodeproject.org/files/ENCFF109VVN/@@download/ENCFF109VVN.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF026DBK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF007PNW 921157 ENCODE Processing Pipeline 4ce72b82ce29a980f5d40fa650d6183a https://www.encodeproject.org/files/ENCFF026DBK/@@download/ENCFF026DBK.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF349NLR bed narrowPeak optimal idr thresholded peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF003VGG, ENCFF109VVN, ENCFF419RSJ, ENCFF785YQI 430442 ENCODE Processing Pipeline 7c4ac3b05b5d2b962a47fd396efc09f7 https://www.encodeproject.org/files/ENCFF349NLR/@@download/ENCFF349NLR.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF003VGG bed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF421EKC, ENCFF494RSA 6133064 ENCODE Processing Pipeline cc9b68d920d81b4c01a4d87e8f8aba18 https://www.encodeproject.org/files/ENCFF003VGG/@@download/ENCFF003VGG.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF401RZN bigBed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF109VVN 12154148 ENCODE Processing Pipeline d023ed2e177cbc915a73175a414e3eb1 https://www.encodeproject.org/files/ENCFF401RZN/@@download/ENCFF401RZN.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF086GZX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NLR 1025061 ENCODE Processing Pipeline 24aae4911b7380b1205f6533b6f0de32 https://www.encodeproject.org/files/ENCFF086GZX/@@download/ENCFF086GZX.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF711MMG bigWig signal p-value ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF020MRS, ENCFF041XFO 319270209 ENCODE Processing Pipeline f11c220a1afa5fa6aa4822f50cc1d520 https://www.encodeproject.org/files/ENCFF711MMG/@@download/ENCFF711MMG.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF529HJK bed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF020MRS, ENCFF041XFO, ENCFF441SQQ 6867475 ENCODE Processing Pipeline a20d028260756ea978a8e7e0bb7c8190 https://www.encodeproject.org/files/ENCFF529HJK/@@download/ENCFF529HJK.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF767AKC bed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF020MRS, ENCFF041XFO 6128691 ENCODE Processing Pipeline 067f275317e354aa6c0420eb3787ad0f https://www.encodeproject.org/files/ENCFF767AKC/@@download/ENCFF767AKC.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF277LNI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF505FYP 930237 ENCODE Processing Pipeline 3a555ad3f3ab287e575ac60165612829 https://www.encodeproject.org/files/ENCFF277LNI/@@download/ENCFF277LNI.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF995HPP bigWig fold change over control ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF020MRS, ENCFF041XFO 244563711 ENCODE Processing Pipeline 04f21464c68eddcf59ee881ed937fdeb https://www.encodeproject.org/files/ENCFF995HPP/@@download/ENCFF995HPP.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF121FGJ bigWig fold change over control ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF020MRS, ENCFF041XFO, ENCFF441SQQ 434115282 ENCODE Processing Pipeline 5b91d28624a7aa9015355ad8306146ae https://www.encodeproject.org/files/ENCFF121FGJ/@@download/ENCFF121FGJ.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF943JKE bed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF041XFO, ENCFF441SQQ 6134340 ENCODE Processing Pipeline 17e242d7d8d74798c7378895af2c4e9b https://www.encodeproject.org/files/ENCFF943JKE/@@download/ENCFF943JKE.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF052ZXU bigBed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF943JKE 12015513 ENCODE Processing Pipeline 4f5f52f2642cd366b913d5aa6fc7c30d https://www.encodeproject.org/files/ENCFF052ZXU/@@download/ENCFF052ZXU.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF830JCH bigWig signal p-value ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF041XFO, ENCFF441SQQ 326161755 ENCODE Processing Pipeline bf03151b34cf590b9453ecb7b2dca573 https://www.encodeproject.org/files/ENCFF830JCH/@@download/ENCFF830JCH.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF046IAT bigBed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF767AKC 12157823 ENCODE Processing Pipeline b1a3eb220edf711377b8837019c56dd3 https://www.encodeproject.org/files/ENCFF046IAT/@@download/ENCFF046IAT.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF505FYP bed narrowPeak conservative idr thresholded peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF529HJK, ENCFF767AKC, ENCFF943JKE 381166 ENCODE Processing Pipeline af3fbc95358642730d6795494d6b7ab6 https://www.encodeproject.org/files/ENCFF505FYP/@@download/ENCFF505FYP.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF346PST bed narrowPeak optimal idr thresholded peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF529HJK, ENCFF767AKC, ENCFF943JKE 431342 ENCODE Processing Pipeline c721bcdf22396821f56c61f2f987d9d5 https://www.encodeproject.org/files/ENCFF346PST/@@download/ENCFF346PST.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF007MAV bigWig fold change over control ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF041XFO, ENCFF441SQQ 266125311 ENCODE Processing Pipeline f5ace9a87e96020674a6983dfeb7ecdb https://www.encodeproject.org/files/ENCFF007MAV/@@download/ENCFF007MAV.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF675RRY bigWig signal p-value ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF020MRS, ENCFF041XFO, ENCFF441SQQ 311633037 ENCODE Processing Pipeline 6b6c52fef71312c51f79d69c4a856f8c https://www.encodeproject.org/files/ENCFF675RRY/@@download/ENCFF675RRY.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF391BKV bigBed narrowPeak peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF529HJK 12118734 ENCODE Processing Pipeline 81dd64adc1e2004bbc9241839366ff32 https://www.encodeproject.org/files/ENCFF391BKV/@@download/ENCFF391BKV.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF624TCW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPC ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF346PST 1028044 ENCODE Processing Pipeline 20dc1878927a5db9315e1e0950b5ff8d https://www.encodeproject.org/files/ENCFF624TCW/@@download/ENCFF624TCW.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF158PZK fastq reads ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF748ZYI 1501762110 Richard Myers, HAIB 85c73a620dc82c8180ee44763e3de9a2 https://www.encodeproject.org/files/ENCFF158PZK/@@download/ENCFF158PZK.fastq.gz HiSeq 2000 /files/ENCFF760ETA/ released antibody characterized with exemption experiment not submitted to GEO ENCFF748ZYI fastq reads ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF158PZK 1529256930 Richard Myers, HAIB 52fbb2d08d9fe22d08f733b2a1cd5575 https://www.encodeproject.org/files/ENCFF748ZYI/@@download/ENCFF748ZYI.fastq.gz HiSeq 2000 /files/ENCFF725DAD/ released antibody characterized with exemption experiment not submitted to GEO ENCFF938FBH bam unfiltered alignments ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF158PZK, ENCFF748ZYI, ENCFF807MUK 3420792907 ENCODE Processing Pipeline 088288000ab2f277f8a9da9f6ef0eb96 https://www.encodeproject.org/files/ENCFF938FBH/@@download/ENCFF938FBH.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF443EQP bam unfiltered alignments ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF158PZK, ENCFF643CGH, ENCFF748ZYI 3427045344 ENCODE Processing Pipeline 509e9608d819ece84434a5d1bd9cf27a https://www.encodeproject.org/files/ENCFF443EQP/@@download/ENCFF443EQP.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF969JNV bam alignments ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF158PZK, ENCFF748ZYI, ENCFF807MUK 2729992663 ENCODE Processing Pipeline a3e4ca6252f23c3edead1410867b0343 https://www.encodeproject.org/files/ENCFF969JNV/@@download/ENCFF969JNV.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF431SFJ bam alignments ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF158PZK, ENCFF643CGH, ENCFF748ZYI 2730326496 ENCODE Processing Pipeline 4a14041aaddedcb6663ddc960e769ab8 https://www.encodeproject.org/files/ENCFF431SFJ/@@download/ENCFF431SFJ.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF931ZQI bigWig signal p-value ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF272GLK, ENCFF431SFJ 1625445615 ENCODE Processing Pipeline 7ff5e5648bc81af1ceaf623075db7e17 https://www.encodeproject.org/files/ENCFF931ZQI/@@download/ENCFF931ZQI.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF082LUY bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF079TMN, ENCFF419RSJ 850321 ENCODE Processing Pipeline 36b5508745278c12377923a78f9ac2c9 https://www.encodeproject.org/files/ENCFF082LUY/@@download/ENCFF082LUY.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF102EXD bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF082LUY 1610999 ENCODE Processing Pipeline 35869c35f2234f5ced21a6d78d430e57 https://www.encodeproject.org/files/ENCFF102EXD/@@download/ENCFF102EXD.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF463TDC bigWig fold change over control ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF272GLK, ENCFF431SFJ 1197070918 ENCODE Processing Pipeline 8a75439a96262e266d325ee387be9d0f https://www.encodeproject.org/files/ENCFF463TDC/@@download/ENCFF463TDC.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF079TMN bed narrowPeak peaks ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF272GLK, ENCFF431SFJ 7081393 ENCODE Processing Pipeline 0288d820c23edc0f1f291e0a292c3714 https://www.encodeproject.org/files/ENCFF079TMN/@@download/ENCFF079TMN.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF415YIB bigBed narrowPeak peaks ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF079TMN 13395015 ENCODE Processing Pipeline 765d2325455e889daf1e9b24778df657 https://www.encodeproject.org/files/ENCFF415YIB/@@download/ENCFF415YIB.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF295CLS bigWig signal p-value ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF209HOQ, ENCFF969JNV 1433484386 ENCODE Processing Pipeline 699f31c6518fb0a5153d8d69eaed73a3 https://www.encodeproject.org/files/ENCFF295CLS/@@download/ENCFF295CLS.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF867HCH bigWig fold change over control ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF209HOQ, ENCFF969JNV 1199369466 ENCODE Processing Pipeline 866f19819f0a478908852fdf74cfa865 https://www.encodeproject.org/files/ENCFF867HCH/@@download/ENCFF867HCH.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF063RHI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF451GFT 1591388 ENCODE Processing Pipeline d593877dab0e0783eae9d6e91fd5ace3 https://www.encodeproject.org/files/ENCFF063RHI/@@download/ENCFF063RHI.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF478WOV bed narrowPeak peaks ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF209HOQ, ENCFF969JNV 7061969 ENCODE Processing Pipeline bcd90b064f2ab7ec6323906c6d492e75 https://www.encodeproject.org/files/ENCFF478WOV/@@download/ENCFF478WOV.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF777JZP bigBed narrowPeak peaks ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF478WOV 13381516 ENCODE Processing Pipeline 3d78756b659cd0b320a1ae90e59f3769 https://www.encodeproject.org/files/ENCFF777JZP/@@download/ENCFF777JZP.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF451GFT bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR893MYW ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF478WOV 835494 ENCODE Processing Pipeline ce5d1c1cbc5d8434c3e1b505d7af8ebe https://www.encodeproject.org/files/ENCFF451GFT/@@download/ENCFF451GFT.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF497NCC fastq reads ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF538ODU 3794863837 Richard Myers, HAIB 34635a5d18d5026506c33b6fa43b74d0 https://www.encodeproject.org/files/ENCFF497NCC/@@download/ENCFF497NCC.fastq.gz HiSeq 2000 /files/ENCFF849CDI/ released antibody characterized with exemption experiment not submitted to GEO ENCFF538ODU fastq reads ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF497NCC 3866057556 Richard Myers, HAIB b9b581df0ce2b7b739c48a3a5946a65a https://www.encodeproject.org/files/ENCFF538ODU/@@download/ENCFF538ODU.fastq.gz HiSeq 2000 /files/ENCFF842SLH/ released antibody characterized with exemption experiment not submitted to GEO ENCFF713HHQ bam alignments ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF497NCC, ENCFF538ODU, ENCFF807MUK 5709270094 ENCODE Processing Pipeline df467380409f313b02b69f865140829f https://www.encodeproject.org/files/ENCFF713HHQ/@@download/ENCFF713HHQ.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF090HDU bam unfiltered alignments ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF497NCC, ENCFF538ODU, ENCFF643CGH 8322301461 ENCODE Processing Pipeline 91799e095000b586b0196e81d1da77ed https://www.encodeproject.org/files/ENCFF090HDU/@@download/ENCFF090HDU.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF827UYJ bam unfiltered alignments ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF497NCC, ENCFF538ODU, ENCFF807MUK 8307359133 ENCODE Processing Pipeline 796ec26a1f0f73e8ee30272cba4371dc https://www.encodeproject.org/files/ENCFF827UYJ/@@download/ENCFF827UYJ.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF939PEG bam alignments ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF497NCC, ENCFF538ODU, ENCFF643CGH 5710536153 ENCODE Processing Pipeline 13a83af065c95ae1c2625410b22fb71f https://www.encodeproject.org/files/ENCFF939PEG/@@download/ENCFF939PEG.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF194WKG bigWig fold change over control ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF661OHD, ENCFF713HHQ 1269632433 ENCODE Processing Pipeline 90d67ba4cf7618cf415ad3a670039b59 https://www.encodeproject.org/files/ENCFF194WKG/@@download/ENCFF194WKG.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF837AYJ bigBed narrowPeak peaks ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF794MZC 12997239 ENCODE Processing Pipeline 97e81c85c0908e649360c1522a36e4e5 https://www.encodeproject.org/files/ENCFF837AYJ/@@download/ENCFF837AYJ.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF122UUO bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF794MZC 1111147 ENCODE Processing Pipeline 342ed7cbced7269395c0820c712280b8 https://www.encodeproject.org/files/ENCFF122UUO/@@download/ENCFF122UUO.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF183UDF bigWig signal p-value ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF736RDZ, ENCFF939PEG 840922482 ENCODE Processing Pipeline c44da31483c493ba693c6256636b33b6 https://www.encodeproject.org/files/ENCFF183UDF/@@download/ENCFF183UDF.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF073AVA bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF912ZJS 1092085 ENCODE Processing Pipeline 581a1fff6f2f73bfc3017c39ee555a41 https://www.encodeproject.org/files/ENCFF073AVA/@@download/ENCFF073AVA.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF261IYM bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF073AVA 2414169 ENCODE Processing Pipeline 5bbafc5612764186b0a623fd56b1910a https://www.encodeproject.org/files/ENCFF261IYM/@@download/ENCFF261IYM.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF794MZC bed narrowPeak peaks ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF661OHD, ENCFF713HHQ 7187896 ENCODE Processing Pipeline 7a355c3791a54b312d9f5f85a4f123ee https://www.encodeproject.org/files/ENCFF794MZC/@@download/ENCFF794MZC.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF078WQQ bigWig fold change over control ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF736RDZ, ENCFF939PEG 1268046308 ENCODE Processing Pipeline d92e246f335529b0d95782cd5a4489fb https://www.encodeproject.org/files/ENCFF078WQQ/@@download/ENCFF078WQQ.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF912ZJS bed narrowPeak peaks ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF736RDZ, ENCFF939PEG 7124863 ENCODE Processing Pipeline 00d1a82e45c50481408b882ac22d4813 https://www.encodeproject.org/files/ENCFF912ZJS/@@download/ENCFF912ZJS.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF795RWR bigBed narrowPeak peaks ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF912ZJS 12926647 ENCODE Processing Pipeline 1274c43c4a9d405a8e3f6033a21cf3fa https://www.encodeproject.org/files/ENCFF795RWR/@@download/ENCFF795RWR.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF107ZYA bigWig signal p-value ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF661OHD, ENCFF713HHQ 839878020 ENCODE Processing Pipeline 8fe3eab1e48513359662a87ab8e7db1d https://www.encodeproject.org/files/ENCFF107ZYA/@@download/ENCFF107ZYA.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF136ZFZ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR920FID ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF122UUO 2443414 ENCODE Processing Pipeline 96b3d417833cfc0576db8e9162a5850f https://www.encodeproject.org/files/ENCFF136ZFZ/@@download/ENCFF136ZFZ.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF920QMA fastq reads ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF513RVZ 3451283868 Richard Myers, HAIB 0feb0a06cb82bc1eab0d8f8a5cd9435e SRA:SRR6214038 https://www.encodeproject.org/files/ENCFF920QMA/@@download/ENCFF920QMA.fastq.gz HiSeq 2000 /files/ENCFF353DLW/ released antibody characterized with exemption ENCFF513RVZ fastq reads ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF920QMA 3611084352 Richard Myers, HAIB 43b73bc4d38ba000fd226e3cb97937a7 SRA:SRR6214038 https://www.encodeproject.org/files/ENCFF513RVZ/@@download/ENCFF513RVZ.fastq.gz HiSeq 2000 /files/ENCFF214RDT/ released antibody characterized with exemption ENCFF759CQL bam unfiltered alignments ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF513RVZ, ENCFF807MUK, ENCFF920QMA 8227512994 ENCODE Processing Pipeline c51e88874f862212e5350a10e1324e01 https://www.encodeproject.org/files/ENCFF759CQL/@@download/ENCFF759CQL.bam hg19 released antibody characterized with exemption ENCFF259CUG bam alignments ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF513RVZ, ENCFF807MUK, ENCFF920QMA 6038242090 ENCODE Processing Pipeline 81a7daeab3300a38975ede0c78d6ee40 https://www.encodeproject.org/files/ENCFF259CUG/@@download/ENCFF259CUG.bam hg19 released antibody characterized with exemption ENCFF531DYO bam unfiltered alignments ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF513RVZ, ENCFF643CGH, ENCFF920QMA 8261271237 ENCODE Processing Pipeline dcbe82c6ba71eafc07a9baf565ae123e https://www.encodeproject.org/files/ENCFF531DYO/@@download/ENCFF531DYO.bam GRCh38 released antibody characterized with exemption ENCFF933WJH bam alignments ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF513RVZ, ENCFF643CGH, ENCFF920QMA 6044955728 ENCODE Processing Pipeline 895a777fb870cb24e7c6b26b674076bb https://www.encodeproject.org/files/ENCFF933WJH/@@download/ENCFF933WJH.bam GRCh38 released antibody characterized with exemption ENCFF149VRW bed narrowPeak peaks ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF259CUG 6579090 ENCODE Processing Pipeline 3dcc54703f8b206b84df53c4c3c2aae9 https://www.encodeproject.org/files/ENCFF149VRW/@@download/ENCFF149VRW.bed.gz hg19 released antibody characterized with exemption ENCFF704KAE bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF149VRW 55182 ENCODE Processing Pipeline 0deb721d7215c93137d5fd7c7b38b75c https://www.encodeproject.org/files/ENCFF704KAE/@@download/ENCFF704KAE.bed.gz hg19 released antibody characterized with exemption ENCFF295ECG bigBed narrowPeak peaks ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF149VRW 11827687 ENCODE Processing Pipeline 0246f1d3b2c7aadb13242d7524bf1f8e https://www.encodeproject.org/files/ENCFF295ECG/@@download/ENCFF295ECG.bigBed hg19 released antibody characterized with exemption ENCFF298QOQ bigWig signal p-value ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF259CUG 1922051502 ENCODE Processing Pipeline 5ddcf889c2657d41c6644fb1f040045e https://www.encodeproject.org/files/ENCFF298QOQ/@@download/ENCFF298QOQ.bigWig hg19 released antibody characterized with exemption ENCFF092BFT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF704KAE 154184 ENCODE Processing Pipeline e71ceefda6114d424e2fbc29115cc62a https://www.encodeproject.org/files/ENCFF092BFT/@@download/ENCFF092BFT.bigBed hg19 released antibody characterized with exemption ENCFF841TPJ bigWig fold change over control ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF259CUG 2076740715 ENCODE Processing Pipeline 281fb45ea10e710b95fe4afc892a33b5 https://www.encodeproject.org/files/ENCFF841TPJ/@@download/ENCFF841TPJ.bigWig hg19 released antibody characterized with exemption ENCFF390MAI bigWig signal p-value ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF933WJH 2109335554 ENCODE Processing Pipeline c3dd070ae288384a4dd61ffb569f9d42 https://www.encodeproject.org/files/ENCFF390MAI/@@download/ENCFF390MAI.bigWig GRCh38 released antibody characterized with exemption ENCFF208SZB bed narrowPeak peaks ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF933WJH 6583515 ENCODE Processing Pipeline b2f1a2b99464be1e53935b40da04d127 https://www.encodeproject.org/files/ENCFF208SZB/@@download/ENCFF208SZB.bed.gz GRCh38 released antibody characterized with exemption ENCFF766NBK bigBed narrowPeak peaks ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF208SZB 11846774 ENCODE Processing Pipeline 175f4d0b8be3b43b2d1d06e529e3d898 https://www.encodeproject.org/files/ENCFF766NBK/@@download/ENCFF766NBK.bigBed GRCh38 released antibody characterized with exemption ENCFF266KJH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF208SZB, ENCFF419RSJ 55153 ENCODE Processing Pipeline 503c228998b2297ca9420c5a2ddca417 https://www.encodeproject.org/files/ENCFF266KJH/@@download/ENCFF266KJH.bed.gz GRCh38 released antibody characterized with exemption ENCFF184LRB bigWig fold change over control ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF933WJH 2067969090 ENCODE Processing Pipeline 70237edcdf74c931fafbe3a33ad52d8c https://www.encodeproject.org/files/ENCFF184LRB/@@download/ENCFF184LRB.bigWig GRCh38 released antibody characterized with exemption ENCFF936PEI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR928LDG ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF266KJH 155945 ENCODE Processing Pipeline 8509ed15e75b2ab4096cdcccd1f7aa82 https://www.encodeproject.org/files/ENCFF936PEI/@@download/ENCFF936PEI.bigBed GRCh38 released antibody characterized with exemption ENCFF901EEE fastq reads ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF890YAG 1824068941 Richard Myers, HAIB b10de4bb9703a430045c5c1ecbe686d9 https://www.encodeproject.org/files/ENCFF901EEE/@@download/ENCFF901EEE.fastq.gz HiSeq 2000 /files/ENCFF676OSC/ released antibody characterized with exemption experiment not submitted to GEO ENCFF890YAG fastq reads ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF901EEE 1766335004 Richard Myers, HAIB 9527b0cfe1c3f0c326f8c4718e44971a https://www.encodeproject.org/files/ENCFF890YAG/@@download/ENCFF890YAG.fastq.gz HiSeq 2000 /files/ENCFF944LNC/ released antibody characterized with exemption experiment not submitted to GEO ENCFF038AFM bam unfiltered alignments ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF807MUK, ENCFF890YAG, ENCFF901EEE 4069622565 ENCODE Processing Pipeline 9f8cc485421fc4b93deaa95b893e8e17 https://www.encodeproject.org/files/ENCFF038AFM/@@download/ENCFF038AFM.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF894CZE bam unfiltered alignments ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF643CGH, ENCFF890YAG, ENCFF901EEE 4076771782 ENCODE Processing Pipeline a3582bb7993c9a9acbc3994a970f732f https://www.encodeproject.org/files/ENCFF894CZE/@@download/ENCFF894CZE.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF475VPO bam alignments ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF807MUK, ENCFF890YAG, ENCFF901EEE 3229689617 ENCODE Processing Pipeline 81e98b5b6b5b0bcd28b8ba8a704a8f49 https://www.encodeproject.org/files/ENCFF475VPO/@@download/ENCFF475VPO.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF421FQC bam alignments ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF643CGH, ENCFF890YAG, ENCFF901EEE 3229558051 ENCODE Processing Pipeline 247c8851ec13aac3d5b538264e327dfe https://www.encodeproject.org/files/ENCFF421FQC/@@download/ENCFF421FQC.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF684NRT bigWig signal p-value ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF421FQC, ENCFF544LSH 991960125 ENCODE Processing Pipeline 534e7ebb9f364bb936237f214b53b2c5 https://www.encodeproject.org/files/ENCFF684NRT/@@download/ENCFF684NRT.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF251GJD bed narrowPeak peaks ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF421FQC, ENCFF544LSH 6772863 ENCODE Processing Pipeline 4d72b8e5468517654cc33cf863e3eeff https://www.encodeproject.org/files/ENCFF251GJD/@@download/ENCFF251GJD.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF783NHB bigBed narrowPeak peaks ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF251GJD 13362718 ENCODE Processing Pipeline 2d8c9aa8f4bc6df3a2fb4c195f3d69f9 https://www.encodeproject.org/files/ENCFF783NHB/@@download/ENCFF783NHB.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF805OFW bigWig fold change over control ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF421FQC, ENCFF544LSH 979012970 ENCODE Processing Pipeline 5c282b1092e66fb6645bdb11b9a00cd6 https://www.encodeproject.org/files/ENCFF805OFW/@@download/ENCFF805OFW.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF109VPF bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF251GJD, ENCFF419RSJ 1451929 ENCODE Processing Pipeline 9b279cd511960c751b320bf3f966d661 https://www.encodeproject.org/files/ENCFF109VPF/@@download/ENCFF109VPF.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF051ALY bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF109VPF 2584180 ENCODE Processing Pipeline 8b7ddbaf114189874db93e04c7dc3b71 https://www.encodeproject.org/files/ENCFF051ALY/@@download/ENCFF051ALY.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF854AET bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF515ANF 2567674 ENCODE Processing Pipeline 50ae75d2a6ebc8509418061899ff1808 https://www.encodeproject.org/files/ENCFF854AET/@@download/ENCFF854AET.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF753OGK bigWig fold change over control ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF179GVV, ENCFF475VPO 981628984 ENCODE Processing Pipeline 2236e78f31d610cc784bf18dde460baf https://www.encodeproject.org/files/ENCFF753OGK/@@download/ENCFF753OGK.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF948YBA bigBed narrowPeak peaks ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF852XOL 13389989 ENCODE Processing Pipeline b2dca1125d0753c7e940e805036cd3eb https://www.encodeproject.org/files/ENCFF948YBA/@@download/ENCFF948YBA.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF852XOL bed narrowPeak peaks ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF179GVV, ENCFF475VPO 6800977 ENCODE Processing Pipeline 9a6fe302a1914b332647992ac5bd310f https://www.encodeproject.org/files/ENCFF852XOL/@@download/ENCFF852XOL.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF331CWK bigWig signal p-value ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF179GVV, ENCFF475VPO 1043720128 ENCODE Processing Pipeline 3c877adf1cbb1df25ab6b8ee7ee06658 https://www.encodeproject.org/files/ENCFF331CWK/@@download/ENCFF331CWK.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF515ANF bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR404VWY ChIP-seq UBERON:0002367 prostate gland tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF852XOL 1439798 ENCODE Processing Pipeline 541befc8306451243eb7131bc608fb97 https://www.encodeproject.org/files/ENCFF515ANF/@@download/ENCFF515ANF.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF813LLQ fastq reads ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF742HCJ 1863191915 Richard Myers, HAIB 4c74b6145375d2ae8f6a87e7b9be31de SRA:SRR6213854 https://www.encodeproject.org/files/ENCFF813LLQ/@@download/ENCFF813LLQ.fastq.gz HiSeq 2000 /files/ENCFF126ZEQ/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF742HCJ fastq reads ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF813LLQ 1958325529 Richard Myers, HAIB 811b1e42fff3eb4dc2b1fd2e257c301a SRA:SRR6213854 https://www.encodeproject.org/files/ENCFF742HCJ/@@download/ENCFF742HCJ.fastq.gz HiSeq 2000 /files/ENCFF931XXU/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF680MFW bam unfiltered alignments ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF742HCJ, ENCFF807MUK, ENCFF813LLQ 4493201585 ENCODE Processing Pipeline 41a4f6e6ca810434873e03c70cfba843 https://www.encodeproject.org/files/ENCFF680MFW/@@download/ENCFF680MFW.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF418BQZ bam alignments ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF742HCJ, ENCFF807MUK, ENCFF813LLQ 2996077988 ENCODE Processing Pipeline 6a0d77aebc8da2607a36c7c515fb0902 https://www.encodeproject.org/files/ENCFF418BQZ/@@download/ENCFF418BQZ.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF489UTO bam alignments ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF742HCJ, ENCFF813LLQ 2996792182 ENCODE Processing Pipeline 7ebb2573713bb32b73a6f5437fd3cbd3 https://www.encodeproject.org/files/ENCFF489UTO/@@download/ENCFF489UTO.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF367CDJ bam unfiltered alignments ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF742HCJ, ENCFF813LLQ 4507708082 ENCODE Processing Pipeline f0dec4540e3e478b51b24046e153d713 https://www.encodeproject.org/files/ENCFF367CDJ/@@download/ENCFF367CDJ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF372ROO bigWig signal p-value ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF489UTO 1077829999 ENCODE Processing Pipeline 379597964551a2362b611e4ac1f09726 https://www.encodeproject.org/files/ENCFF372ROO/@@download/ENCFF372ROO.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF004UZT bigWig fold change over control ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF489UTO 1110300764 ENCODE Processing Pipeline 180777adb660e19fd430beada638108a https://www.encodeproject.org/files/ENCFF004UZT/@@download/ENCFF004UZT.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF848EEE bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF565EAB 333908 ENCODE Processing Pipeline 8e37167c162cc8b0e14b243a626c5360 https://www.encodeproject.org/files/ENCFF848EEE/@@download/ENCFF848EEE.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF565EAB bed narrowPeak peaks ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF489UTO 6283164 ENCODE Processing Pipeline 43bfa55db0f03e753f6485bd40e5e572 https://www.encodeproject.org/files/ENCFF565EAB/@@download/ENCFF565EAB.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF942RZC bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF848EEE 589606 ENCODE Processing Pipeline 26dfffd59e4783b25c889bd2025ec353 https://www.encodeproject.org/files/ENCFF942RZC/@@download/ENCFF942RZC.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF933FYZ bigBed narrowPeak peaks ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF565EAB 11545657 ENCODE Processing Pipeline 333052dbd373b2df5425a2582dfcd5fa https://www.encodeproject.org/files/ENCFF933FYZ/@@download/ENCFF933FYZ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF600GZC bigWig signal p-value ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF295NCW, ENCFF418BQZ 1071673885 ENCODE Processing Pipeline 24ed412998b7c559f7b0b3e47274b175 https://www.encodeproject.org/files/ENCFF600GZC/@@download/ENCFF600GZC.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF026FOM bigWig fold change over control ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF295NCW, ENCFF418BQZ 1109386625 ENCODE Processing Pipeline d26847b74d149f3def676439bc5f0c54 https://www.encodeproject.org/files/ENCFF026FOM/@@download/ENCFF026FOM.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF850HEX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF086ABE 713723 ENCODE Processing Pipeline 512bdbc1ac492ee36fb5cb69e9b6a558 https://www.encodeproject.org/files/ENCFF850HEX/@@download/ENCFF850HEX.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF167UCC bed narrowPeak peaks ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF295NCW, ENCFF418BQZ 6297643 ENCODE Processing Pipeline 76864e59ed124ab4e38fca8465287cc0 https://www.encodeproject.org/files/ENCFF167UCC/@@download/ENCFF167UCC.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF319SNK bigBed narrowPeak peaks ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF167UCC 11545605 ENCODE Processing Pipeline b81f9c33e805b76ef3d757efc680c39f https://www.encodeproject.org/files/ENCFF319SNK/@@download/ENCFF319SNK.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF086ABE bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR569SZK ChIP-seq UBERON:0001323 tibial nerve tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF167UCC 335794 ENCODE Processing Pipeline e94d0fdbdf0f3140f94120414bc28237 https://www.encodeproject.org/files/ENCFF086ABE/@@download/ENCFF086ABE.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF175RYK fastq reads ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF287TQD 2117158261 Richard Myers, HAIB 11d017adbea451e2f48002cfc40bc0a2 SRA:SRR6213671 https://www.encodeproject.org/files/ENCFF175RYK/@@download/ENCFF175RYK.fastq.gz HiSeq 2000 /files/ENCFF088HMZ/ released antibody characterized with exemption ENCFF287TQD fastq reads ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF175RYK 2226718227 Richard Myers, HAIB ebf6f3b0b47b6376c4e80202787d5af0 SRA:SRR6213671 https://www.encodeproject.org/files/ENCFF287TQD/@@download/ENCFF287TQD.fastq.gz HiSeq 2000 /files/ENCFF722QTP/ released antibody characterized with exemption ENCFF214BIG bam alignments ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF175RYK, ENCFF287TQD, ENCFF807MUK 3978133257 ENCODE Processing Pipeline 913751d33d1d76ab5ef340c1ca093288 https://www.encodeproject.org/files/ENCFF214BIG/@@download/ENCFF214BIG.bam hg19 released antibody characterized with exemption ENCFF871DWG bam unfiltered alignments ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF175RYK, ENCFF287TQD, ENCFF807MUK 5276149260 ENCODE Processing Pipeline 3cfd0d31ed451cea33f4bfe80ec6b4ae https://www.encodeproject.org/files/ENCFF871DWG/@@download/ENCFF871DWG.bam hg19 released antibody characterized with exemption ENCFF778SOD bam unfiltered alignments ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF175RYK, ENCFF287TQD, ENCFF643CGH 5301310825 ENCODE Processing Pipeline 16b8347c0e6da311c61965b7148e7798 https://www.encodeproject.org/files/ENCFF778SOD/@@download/ENCFF778SOD.bam GRCh38 released antibody characterized with exemption ENCFF533BQE bam alignments ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF175RYK, ENCFF287TQD, ENCFF643CGH 3981961601 ENCODE Processing Pipeline 1eed2c39cd4bbb4f3796f59d69de30f5 https://www.encodeproject.org/files/ENCFF533BQE/@@download/ENCFF533BQE.bam GRCh38 released antibody characterized with exemption ENCFF169QIW bigWig signal p-value ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF533BQE 1447111243 ENCODE Processing Pipeline 0769c5d58fc3c26bfeb6782ecf19ca20 https://www.encodeproject.org/files/ENCFF169QIW/@@download/ENCFF169QIW.bigWig GRCh38 released antibody characterized with exemption ENCFF141YEU bigWig fold change over control ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF533BQE 1454733162 ENCODE Processing Pipeline 56a4e9bbcf0f301ca845eaeaeec5587e https://www.encodeproject.org/files/ENCFF141YEU/@@download/ENCFF141YEU.bigWig GRCh38 released antibody characterized with exemption ENCFF649MFN bed narrowPeak peaks ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF533BQE 5748223 ENCODE Processing Pipeline ff6c1530b76c4cbdb8f6f9e89b33081b https://www.encodeproject.org/files/ENCFF649MFN/@@download/ENCFF649MFN.bed.gz GRCh38 released antibody characterized with exemption ENCFF614VFU bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF649MFN 1113 ENCODE Processing Pipeline 2bb0ba306609508813ca01072a9b91dd https://www.encodeproject.org/files/ENCFF614VFU/@@download/ENCFF614VFU.bed.gz GRCh38 released antibody characterized with exemption ENCFF648ODL bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF614VFU 77132 ENCODE Processing Pipeline 72f6ea9fdcbe23774d0b5fe4fa2b4e4b https://www.encodeproject.org/files/ENCFF648ODL/@@download/ENCFF648ODL.bigBed GRCh38 released antibody characterized with exemption ENCFF686NBP bigBed narrowPeak peaks ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF649MFN 11914134 ENCODE Processing Pipeline fb7caa31a0cb82ebc9078780994aa8bb https://www.encodeproject.org/files/ENCFF686NBP/@@download/ENCFF686NBP.bigBed GRCh38 released antibody characterized with exemption ENCFF770IUZ bigWig signal p-value ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF214BIG 1591389678 ENCODE Processing Pipeline 22d5e700e3c50521a904c0e553f2c088 https://www.encodeproject.org/files/ENCFF770IUZ/@@download/ENCFF770IUZ.bigWig hg19 released antibody characterized with exemption ENCFF020NZV bigWig fold change over control ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF214BIG 1441611713 ENCODE Processing Pipeline 717c0c111ab821ed7631cdec2e105211 https://www.encodeproject.org/files/ENCFF020NZV/@@download/ENCFF020NZV.bigWig hg19 released antibody characterized with exemption ENCFF407HSE bigBed narrowPeak peaks ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF662PBM 11608725 ENCODE Processing Pipeline 1381dac8f5ccce4f0dd9aa2b8595af2e https://www.encodeproject.org/files/ENCFF407HSE/@@download/ENCFF407HSE.bigBed hg19 released antibody characterized with exemption ENCFF662PBM bed narrowPeak peaks ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF214BIG 5508970 ENCODE Processing Pipeline 59ceb2705275ef86a80deae6ae72c4bb https://www.encodeproject.org/files/ENCFF662PBM/@@download/ENCFF662PBM.bed.gz hg19 released antibody characterized with exemption ENCFF804AVM bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF662PBM 807 ENCODE Processing Pipeline a163aa4054a89722cb6ca269781b8b63 https://www.encodeproject.org/files/ENCFF804AVM/@@download/ENCFF804AVM.bed.gz hg19 released antibody characterized with exemption ENCFF096GUL bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR528UBJ ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF804AVM 68251 ENCODE Processing Pipeline b8d5572449d2a477e1e7b619e3915abb https://www.encodeproject.org/files/ENCFF096GUL/@@download/ENCFF096GUL.bigBed hg19 released antibody characterized with exemption ENCFF000PLX bam alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PMK 659046538 Richard Myers, HAIB 115431a8e8d3c8ca5331f50d53d15d00 https://www.encodeproject.org/files/ENCFF000PLX/@@download/ENCFF000PLX.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PLY bam alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PMN 759399098 Richard Myers, HAIB 6c0853b4439ce00eb3609cc2040488c1 https://www.encodeproject.org/files/ENCFF000PLY/@@download/ENCFF000PLY.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PLZ bigBed broadPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UGW 125514 Richard Myers, HAIB 9b3ec959228356e208b894a19637ab5f https://www.encodeproject.org/files/ENCFF000PLZ/@@download/ENCFF000PLZ.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PMA bigBed broadPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UGX 147835 Richard Myers, HAIB 90ffcf0c1c36cbd2dd916decc90d68e8 https://www.encodeproject.org/files/ENCFF000PMA/@@download/ENCFF000PMA.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PMD bigWig raw signal ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 14949534 Richard Myers, HAIB 8c8ddfee4ea9bef9cfc5ad5676bda82a https://www.encodeproject.org/files/ENCFF000PMD/@@download/ENCFF000PMD.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PME bigWig raw signal ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 28688096 Richard Myers, HAIB 7b4bcd7f044731e5007c8779304f8606 https://www.encodeproject.org/files/ENCFF000PME/@@download/ENCFF000PME.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PMK fastq reads ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1628706677 Richard Myers, HAIB b2afbe4326cd37f58fcd8e078356dd9c https://www.encodeproject.org/files/ENCFF000PMK/@@download/ENCFF000PMK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POO/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PMN fastq reads ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1751027755 Richard Myers, HAIB 3d2cd782aab394e1bfba80b45d6bdf1b https://www.encodeproject.org/files/ENCFF000PMN/@@download/ENCFF000PMN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POQ/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001UGW bed broadPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 55399 Richard Myers, HAIB 30d248b90d361c4f87c3ff72ea79493e https://www.encodeproject.org/files/ENCFF001UGW/@@download/ENCFF001UGW.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UGX bed broadPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 75950 Richard Myers, HAIB e5fe9cefcbe6c83c3c38642e9132b641 https://www.encodeproject.org/files/ENCFF001UGX/@@download/ENCFF001UGX.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CKT bed narrowPeak optimal idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 152976 ENCODE Consortium Analysis Working Group 393b6967f22a5787bb74536e5846ef76 https://www.encodeproject.org/files/ENCFF002CKT/@@download/ENCFF002CKT.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF694DVO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE ENCFF002CKT 480876 ENCODE Consortium 0a69527b62dcb56dd09990816b7f3ab8 https://www.encodeproject.org/files/ENCFF694DVO/@@download/ENCFF694DVO.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF572UTS bam unfiltered alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PMN, ENCFF643CGH 2018521726 ENCODE Processing Pipeline 4275e483f3fc45d211bfb3f94a12d201 https://www.encodeproject.org/files/ENCFF572UTS/@@download/ENCFF572UTS.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF195HUS bam alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PMN, ENCFF643CGH 456227150 ENCODE Processing Pipeline a0be0ff88a6151b356d038eb53c00b8e https://www.encodeproject.org/files/ENCFF195HUS/@@download/ENCFF195HUS.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF351TOY bam unfiltered alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PMK, ENCFF643CGH 1955208916 ENCODE Processing Pipeline f3dde7ec81f1202b36d871f9ad27142d https://www.encodeproject.org/files/ENCFF351TOY/@@download/ENCFF351TOY.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF291BBG bam alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PMK, ENCFF643CGH 506369414 ENCODE Processing Pipeline 76daa1805a91587d9a1b8e6404b60269 https://www.encodeproject.org/files/ENCFF291BBG/@@download/ENCFF291BBG.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF132TMM bam unfiltered alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PMN, ENCFF807MUK 2015415804 ENCODE Processing Pipeline 1ccc259d214efdd210d677d7c4f07eec https://www.encodeproject.org/files/ENCFF132TMM/@@download/ENCFF132TMM.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF714VYF bam alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PMN, ENCFF807MUK 456500596 ENCODE Processing Pipeline 0d769120b09893e49ec9ff6efe68c72e https://www.encodeproject.org/files/ENCFF714VYF/@@download/ENCFF714VYF.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF246LVD bam unfiltered alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PMK, ENCFF807MUK 1951601167 ENCODE Processing Pipeline d882199a507f45a0a012c19c88a55013 https://www.encodeproject.org/files/ENCFF246LVD/@@download/ENCFF246LVD.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF967BLL bam alignments ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PMK, ENCFF807MUK 506627868 ENCODE Processing Pipeline 357e6eda9af1bb231e628e41baf26840 https://www.encodeproject.org/files/ENCFF967BLL/@@download/ENCFF967BLL.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF838GYF bigWig signal p-value ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF292YHA, ENCFF714VYF, ENCFF782VTV, ENCFF967BLL 521129173 ENCODE Processing Pipeline 0f56af875c1c46a55737cb1dfb3a9e13 https://www.encodeproject.org/files/ENCFF838GYF/@@download/ENCFF838GYF.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF906TPA bed narrowPeak conservative idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF413BWR, ENCFF816UIF, ENCFF884SBE 74355 ENCODE Processing Pipeline ec123b6d86c52e45f3b222f45b3e912d https://www.encodeproject.org/files/ENCFF906TPA/@@download/ENCFF906TPA.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF670OCB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF153JLK 209287 ENCODE Processing Pipeline abbc1330279b24daa7ef16e57f32def3 https://www.encodeproject.org/files/ENCFF670OCB/@@download/ENCFF670OCB.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF996PZM bigWig signal p-value ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF292YHA, ENCFF782VTV, ENCFF967BLL 459161375 ENCODE Processing Pipeline 8fe341c62061f023a2c0011b3d62e058 https://www.encodeproject.org/files/ENCFF996PZM/@@download/ENCFF996PZM.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF816UIF bed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF292YHA, ENCFF782VTV, ENCFF967BLL 4640270 ENCODE Processing Pipeline 239a09275391130d6fec1cb7bc0a9e9b https://www.encodeproject.org/files/ENCFF816UIF/@@download/ENCFF816UIF.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF884SBE bed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF292YHA, ENCFF714VYF, ENCFF782VTV 3331670 ENCODE Processing Pipeline 5397da8ebe0a581e7021de33216a3a87 https://www.encodeproject.org/files/ENCFF884SBE/@@download/ENCFF884SBE.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF413BWR bed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF292YHA, ENCFF714VYF, ENCFF782VTV, ENCFF967BLL 5137406 ENCODE Processing Pipeline e5ccd307f3f3c778f7ef63716f039b9a https://www.encodeproject.org/files/ENCFF413BWR/@@download/ENCFF413BWR.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF104BAD bigBed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF816UIF 10665233 ENCODE Processing Pipeline ccdddb7430c83ea103698e3883dcb9dc https://www.encodeproject.org/files/ENCFF104BAD/@@download/ENCFF104BAD.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF093YFU bigBed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF884SBE 8054523 ENCODE Processing Pipeline 482c5b80e33c87f0be0a08c5a7a0f412 https://www.encodeproject.org/files/ENCFF093YFU/@@download/ENCFF093YFU.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF250FPR bigWig signal p-value ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF292YHA, ENCFF714VYF, ENCFF782VTV 429346282 ENCODE Processing Pipeline 16db5629376bc61f7bdeef6d4f2765f2 https://www.encodeproject.org/files/ENCFF250FPR/@@download/ENCFF250FPR.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF249UUU bigWig fold change over control ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF292YHA, ENCFF782VTV, ENCFF967BLL 309270856 ENCODE Processing Pipeline 31923973f168d936f4753750336cecbb https://www.encodeproject.org/files/ENCFF249UUU/@@download/ENCFF249UUU.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF153JLK bed narrowPeak optimal idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF413BWR, ENCFF816UIF, ENCFF884SBE 82634 ENCODE Processing Pipeline cc4c628548dadf6eff641ba4393fd6fd https://www.encodeproject.org/files/ENCFF153JLK/@@download/ENCFF153JLK.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF227TLB bigWig fold change over control ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF292YHA, ENCFF714VYF, ENCFF782VTV 261677261 ENCODE Processing Pipeline a083962e8d03fbea280cca4213df6827 https://www.encodeproject.org/files/ENCFF227TLB/@@download/ENCFF227TLB.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF843JOP bigWig fold change over control ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF292YHA, ENCFF714VYF, ENCFF782VTV, ENCFF967BLL 470132463 ENCODE Processing Pipeline 98317f97836377ff22a6cf9c54c23c54 https://www.encodeproject.org/files/ENCFF843JOP/@@download/ENCFF843JOP.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF846LEX bigBed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF413BWR 11098277 ENCODE Processing Pipeline 8bf755f46e177edef2be883ba3ddecd5 https://www.encodeproject.org/files/ENCFF846LEX/@@download/ENCFF846LEX.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF466XKF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF906TPA 196876 ENCODE Processing Pipeline 5b576b91dc7e6db317606db92975a94f https://www.encodeproject.org/files/ENCFF466XKF/@@download/ENCFF466XKF.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF007ROG bigWig signal p-value ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF291BBG, ENCFF741TQN 453441427 ENCODE Processing Pipeline 1fdbf0a49e1951d1a4a61e02943ae868 https://www.encodeproject.org/files/ENCFF007ROG/@@download/ENCFF007ROG.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF338SZN bigWig signal p-value ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF195HUS, ENCFF249PQD, ENCFF741TQN 471867868 ENCODE Processing Pipeline 6d15ac6f5264386c487c52b8f266e222 https://www.encodeproject.org/files/ENCFF338SZN/@@download/ENCFF338SZN.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF846UEJ bigWig signal p-value ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF195HUS, ENCFF249PQD, ENCFF291BBG, ENCFF741TQN 546093610 ENCODE Processing Pipeline 9fcdb2748d82fae7251469986215778a https://www.encodeproject.org/files/ENCFF846UEJ/@@download/ENCFF846UEJ.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF128SGR bigWig fold change over control ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF291BBG, ENCFF741TQN 309137001 ENCODE Processing Pipeline cd5e0d071e8ae7701b1ac312ad199996 https://www.encodeproject.org/files/ENCFF128SGR/@@download/ENCFF128SGR.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF335DCT bigWig fold change over control ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF195HUS, ENCFF249PQD, ENCFF741TQN 262193343 ENCODE Processing Pipeline fc5dea6465f0929012ece39fdd713f24 https://www.encodeproject.org/files/ENCFF335DCT/@@download/ENCFF335DCT.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF322BAY bed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF291BBG, ENCFF741TQN 4639914 ENCODE Processing Pipeline 2ff583799ccfea80c1891ce991ee92a6 https://www.encodeproject.org/files/ENCFF322BAY/@@download/ENCFF322BAY.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF632CDU bed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF195HUS, ENCFF249PQD, ENCFF291BBG, ENCFF741TQN 5137490 ENCODE Processing Pipeline 49297da0b5c8619b6167087ba54230dc https://www.encodeproject.org/files/ENCFF632CDU/@@download/ENCFF632CDU.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF353IMU bigWig fold change over control ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF195HUS, ENCFF249PQD, ENCFF291BBG, ENCFF741TQN 469076942 ENCODE Processing Pipeline 5bc6483061f0b5dd92e2b85b396174b6 https://www.encodeproject.org/files/ENCFF353IMU/@@download/ENCFF353IMU.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF873CMX bed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF195HUS, ENCFF249PQD, ENCFF741TQN 3331637 ENCODE Processing Pipeline 06145539f63a6adb24d222aace13aa81 https://www.encodeproject.org/files/ENCFF873CMX/@@download/ENCFF873CMX.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF946DTX bigBed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF322BAY 10666665 ENCODE Processing Pipeline d5706f8f788572a8419cba31fa29960f https://www.encodeproject.org/files/ENCFF946DTX/@@download/ENCFF946DTX.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF315VSJ bigBed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF873CMX 8055327 ENCODE Processing Pipeline cd73dbe9f84f3e3e5cafdb040434c33f https://www.encodeproject.org/files/ENCFF315VSJ/@@download/ENCFF315VSJ.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF742PGK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF986RRJ 211633 ENCODE Processing Pipeline a2b2905d92181a1f63d9499273e0ab69 https://www.encodeproject.org/files/ENCFF742PGK/@@download/ENCFF742PGK.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF871PBV bigBed narrowPeak peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF632CDU 11107657 ENCODE Processing Pipeline f0aca6cc13df9812b54fe003309ca209 https://www.encodeproject.org/files/ENCFF871PBV/@@download/ENCFF871PBV.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF757KNN bed narrowPeak conservative idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF322BAY, ENCFF419RSJ, ENCFF632CDU, ENCFF873CMX 74535 ENCODE Processing Pipeline a140de182960f816879c01347809cd05 https://www.encodeproject.org/files/ENCFF757KNN/@@download/ENCFF757KNN.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF986RRJ bed narrowPeak optimal idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF322BAY, ENCFF419RSJ, ENCFF632CDU, ENCFF873CMX 83979 ENCODE Processing Pipeline 537f45e952b7957963fcba3d2bc28c62 https://www.encodeproject.org/files/ENCFF986RRJ/@@download/ENCFF986RRJ.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF717YTE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF757KNN 198046 ENCODE Processing Pipeline d7ccdee744c60584f37808c51cb90cd7 https://www.encodeproject.org/files/ENCFF717YTE/@@download/ENCFF717YTE.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000NLB bam alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NLI 760832442 Richard Myers, HAIB 01e37e53b7620be9aab3794e348ef3bf https://www.encodeproject.org/files/ENCFF000NLB/@@download/ENCFF000NLB.bam hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLC bigBed broadPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TUP 131358 Richard Myers, HAIB c573a199668931fecc2f065a13cdc742 https://www.encodeproject.org/files/ENCFF000NLC/@@download/ENCFF000NLC.bigBed hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLD bigBed broadPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TUQ 122101 Richard Myers, HAIB 50014ec3405bac55d25b58f12ed65917 https://www.encodeproject.org/files/ENCFF000NLD/@@download/ENCFF000NLD.bigBed hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLE bam alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NLK 966741363 Richard Myers, HAIB 2ed1f96fd9ac4c28a0497602cf2de0ae https://www.encodeproject.org/files/ENCFF000NLE/@@download/ENCFF000NLE.bam hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLF bigWig raw signal ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 1 4850352 Richard Myers, HAIB 951c512d96555ce35bb93b1b1f740ba2 https://www.encodeproject.org/files/ENCFF000NLF/@@download/ENCFF000NLF.bigWig hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NLG bigWig raw signal ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 1 6215222 Richard Myers, HAIB c7179addc1661dc5c197bc5681b4d0fe https://www.encodeproject.org/files/ENCFF000NLG/@@download/ENCFF000NLG.bigWig hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NLI fastq reads ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 743254121 Richard Myers, HAIB c020d943ec6fdfd3f5923dbf79fb6017 https://www.encodeproject.org/files/ENCFF000NLI/@@download/ENCFF000NLI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NLT/ released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLK fastq reads ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 857623737 Richard Myers, HAIB 94fc07040dcbd7341ed78fb788c5d61c https://www.encodeproject.org/files/ENCFF000NLK/@@download/ENCFF000NLK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NLU/ released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF001TUP bed broadPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 1 42206 Richard Myers, HAIB c8257e9aa8446c0f499650561224a9f7 https://www.encodeproject.org/files/ENCFF001TUP/@@download/ENCFF001TUP.bed.gz hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TUQ bed broadPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 1 36454 Richard Myers, HAIB 173aee593cda3a404818b08329850fbb https://www.encodeproject.org/files/ENCFF001TUQ/@@download/ENCFF001TUQ.bed.gz hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CGI bed narrowPeak optimal idr thresholded peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 114872 ENCODE Consortium Analysis Working Group 24d6079f95b3d4eb84d699296b9a8a73 https://www.encodeproject.org/files/ENCFF002CGI/@@download/ENCFF002CGI.bed.gz hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF955XXY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE ENCFF002CGI 376941 ENCODE Consortium 11c3edf89dafc8d0cecbd23f32870b0a https://www.encodeproject.org/files/ENCFF955XXY/@@download/ENCFF955XXY.bigBed hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF888ZGR bam unfiltered alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NLI, ENCFF643CGH 955071063 ENCODE Processing Pipeline a3a0a653b2cbe50a24a327e835884348 https://www.encodeproject.org/files/ENCFF888ZGR/@@download/ENCFF888ZGR.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF936SHM bam alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NLI, ENCFF643CGH 500423052 ENCODE Processing Pipeline db86d88e1015ce6694ff52cd813d1e80 https://www.encodeproject.org/files/ENCFF936SHM/@@download/ENCFF936SHM.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF720TRV bam unfiltered alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NLK, ENCFF643CGH 1181643069 ENCODE Processing Pipeline 758b01f0d3ffb80d4dff4f9ba9a56001 https://www.encodeproject.org/files/ENCFF720TRV/@@download/ENCFF720TRV.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF481EDX bam alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NLK, ENCFF643CGH 718732177 ENCODE Processing Pipeline cab79b21dc677de1e37a5804ebe94630 https://www.encodeproject.org/files/ENCFF481EDX/@@download/ENCFF481EDX.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF250YWI bam unfiltered alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NLI, ENCFF807MUK 951724123 ENCODE Processing Pipeline f74924b71051dc8cfe23efd7d1fe4b3e https://www.encodeproject.org/files/ENCFF250YWI/@@download/ENCFF250YWI.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF670BCP bam alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NLI, ENCFF807MUK 500713755 ENCODE Processing Pipeline 3897e03663185763e5ec2d43fc6e1b4c https://www.encodeproject.org/files/ENCFF670BCP/@@download/ENCFF670BCP.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF278VPH bam unfiltered alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NLK, ENCFF807MUK 1176705208 ENCODE Processing Pipeline 9246e5f77dc0e76da3bb85e3498abca7 https://www.encodeproject.org/files/ENCFF278VPH/@@download/ENCFF278VPH.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF260DQF bam alignments ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NLK, ENCFF807MUK 719070058 ENCODE Processing Pipeline 2027875978427e38a244ed4e685236cb https://www.encodeproject.org/files/ENCFF260DQF/@@download/ENCFF260DQF.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF416MGM bigWig signal p-value ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF703HXP, ENCFF820TDD, ENCFF936SHM 333149449 ENCODE Processing Pipeline 4eaf6114415d182c79d7f07dbc641e34 https://www.encodeproject.org/files/ENCFF416MGM/@@download/ENCFF416MGM.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF384GNE bigWig signal p-value ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF481EDX, ENCFF703HXP, ENCFF820TDD 390987289 ENCODE Processing Pipeline b23802ab5bb9bb4d22558fb13a4fdcc9 https://www.encodeproject.org/files/ENCFF384GNE/@@download/ENCFF384GNE.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF728AZK bigWig signal p-value ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF481EDX, ENCFF703HXP, ENCFF820TDD, ENCFF936SHM 483913059 ENCODE Processing Pipeline d656a4c4e7ca7680ec2365a54f855077 https://www.encodeproject.org/files/ENCFF728AZK/@@download/ENCFF728AZK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF087BIG bigWig fold change over control ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF703HXP, ENCFF820TDD, ENCFF936SHM 227508163 ENCODE Processing Pipeline 04a42e0b7fb4c651ca151f00d3a65df3 https://www.encodeproject.org/files/ENCFF087BIG/@@download/ENCFF087BIG.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF340RCD bigWig fold change over control ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF481EDX, ENCFF703HXP, ENCFF820TDD 335352208 ENCODE Processing Pipeline 3512a3f511a5ce2abaeb63c52789469b https://www.encodeproject.org/files/ENCFF340RCD/@@download/ENCFF340RCD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF004DHQ bigWig fold change over control ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF481EDX, ENCFF703HXP, ENCFF820TDD, ENCFF936SHM 510464055 ENCODE Processing Pipeline 4527f54d7befaf2d7f3bb9787a192eb5 https://www.encodeproject.org/files/ENCFF004DHQ/@@download/ENCFF004DHQ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF972WBA bed narrowPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF481EDX, ENCFF703HXP, ENCFF820TDD 4288202 ENCODE Processing Pipeline 26a973b059acd5d2945987d9d09b5a15 https://www.encodeproject.org/files/ENCFF972WBA/@@download/ENCFF972WBA.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF917YKW bed narrowPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF481EDX, ENCFF703HXP, ENCFF820TDD, ENCFF936SHM 4651888 ENCODE Processing Pipeline bc36f99eb9e386c0dde2d47a9a6b56b2 https://www.encodeproject.org/files/ENCFF917YKW/@@download/ENCFF917YKW.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF719PQG bed narrowPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF703HXP, ENCFF820TDD, ENCFF936SHM 3867238 ENCODE Processing Pipeline f6c13c9f30a88ae7417497501941fdbb https://www.encodeproject.org/files/ENCFF719PQG/@@download/ENCFF719PQG.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF859PPX bigBed narrowPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF972WBA 10782988 ENCODE Processing Pipeline 92f3a33e0b013690f8b6e2597b2d829a https://www.encodeproject.org/files/ENCFF859PPX/@@download/ENCFF859PPX.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF519AER bigBed narrowPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF917YKW 11142497 ENCODE Processing Pipeline b826419805c43ac43d69ec3f7cb2e71f https://www.encodeproject.org/files/ENCFF519AER/@@download/ENCFF519AER.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF680WIE bigBed narrowPeak peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF719PQG 8177744 ENCODE Processing Pipeline e9972bae06942597d14a3df6d42b5982 https://www.encodeproject.org/files/ENCFF680WIE/@@download/ENCFF680WIE.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF309HBT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF975LFF 216827 ENCODE Processing Pipeline 6060fad531cfed9401d2c77b83e5aa7a https://www.encodeproject.org/files/ENCFF309HBT/@@download/ENCFF309HBT.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF494CWX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF778BLL 241840 ENCODE Processing Pipeline 614daf0231a2c7020c8fa1ce4ab73819 https://www.encodeproject.org/files/ENCFF494CWX/@@download/ENCFF494CWX.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF975LFF bed narrowPeak conservative idr thresholded peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF719PQG, ENCFF917YKW, ENCFF972WBA 76412 ENCODE Processing Pipeline 91f8e2cb3114045e982d718d1ebd0801 https://www.encodeproject.org/files/ENCFF975LFF/@@download/ENCFF975LFF.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF778BLL bed narrowPeak optimal idr thresholded peaks ENCSR000BQR ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF719PQG, ENCFF917YKW, ENCFF972WBA 91220 ENCODE Processing Pipeline 0eaea4a72ad3ee00aaad34d729cea8d9 https://www.encodeproject.org/files/ENCFF778BLL/@@download/ENCFF778BLL.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF887BKA fastq reads ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 1 50 single-ended 2281198254 Richard Myers, HAIB 9bd13a544349ee81954aa27252608855 SRA:SRR5338649 https://www.encodeproject.org/files/ENCFF887BKA/@@download/ENCFF887BKA.fastq.gz HiSeq 2000 /files/ENCFF000OEB/ released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF354VZR fastq reads ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 1 50 single-ended 1747145757 Richard Myers, HAIB 2ad82ac441df32f657ffeeaa693df0de SRA:SRR5338648 https://www.encodeproject.org/files/ENCFF354VZR/@@download/ENCFF354VZR.fastq.gz HiSeq 2000 /files/ENCFF000ODZ/ released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF692MUQ bam unfiltered alignments ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 50 ENCFF354VZR, ENCFF643CGH 1678527986 ENCODE Processing Pipeline 8940799a9adf2bc0f16bf4d48df7cc6d https://www.encodeproject.org/files/ENCFF692MUQ/@@download/ENCFF692MUQ.bam GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF626FVT bam unfiltered alignments ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 50 ENCFF643CGH, ENCFF887BKA 2107759784 ENCODE Processing Pipeline c43c8d60a403148e62643ab3db8744a4 https://www.encodeproject.org/files/ENCFF626FVT/@@download/ENCFF626FVT.bam GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF389CJX bam unfiltered alignments ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 50 ENCFF807MUK, ENCFF887BKA 2123956065 ENCODE Processing Pipeline 1022094d760cebdc79906916afcf3927 https://www.encodeproject.org/files/ENCFF389CJX/@@download/ENCFF389CJX.bam hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF669GJB bam unfiltered alignments ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 50 ENCFF354VZR, ENCFF807MUK 1678875995 ENCODE Processing Pipeline 41390f8a96869acfbd6f9e7fef15afca https://www.encodeproject.org/files/ENCFF669GJB/@@download/ENCFF669GJB.bam hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF697EBC bam alignments ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 50 ENCFF807MUK, ENCFF887BKA 847566567 ENCODE Processing Pipeline 99d4d82c09345a62a1973841e6ede201 https://www.encodeproject.org/files/ENCFF697EBC/@@download/ENCFF697EBC.bam hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF772ZLA bam alignments ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 50 ENCFF354VZR, ENCFF643CGH 870804648 ENCODE Processing Pipeline 19a03c716ac209069b26a1ccec1e0a8d https://www.encodeproject.org/files/ENCFF772ZLA/@@download/ENCFF772ZLA.bam GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF554RCH bam alignments ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 50 ENCFF643CGH, ENCFF887BKA 855534594 ENCODE Processing Pipeline 7dfb0b136c0d6d0572ba376312932b55 https://www.encodeproject.org/files/ENCFF554RCH/@@download/ENCFF554RCH.bam GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF092VSU bam alignments ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 50 ENCFF354VZR, ENCFF807MUK 863714936 ENCODE Processing Pipeline 3f8e471bd628e7c08363f9e8c8174fee https://www.encodeproject.org/files/ENCFF092VSU/@@download/ENCFF092VSU.bam hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF061RWI bigBed narrowPeak conservative idr thresholded peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF031TYY 345706 ENCODE Processing Pipeline 34114e27a7e20c9d725f7253e4cd625b https://www.encodeproject.org/files/ENCFF061RWI/@@download/ENCFF061RWI.bigBed hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF420YHY bed narrowPeak optimal idr thresholded peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF001TDO, ENCFF454MFQ, ENCFF799MMA, ENCFF836SKU 204510 ENCODE Processing Pipeline f584a6cb5c5943f310fe7bc4badc95af https://www.encodeproject.org/files/ENCFF420YHY/@@download/ENCFF420YHY.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF974AWJ bigWig signal p-value ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF092VSU, ENCFF513ZBH, ENCFF697EBC, ENCFF777FIV 764383057 ENCODE Processing Pipeline 39911326d3fa4dbe978e21a941895500 https://www.encodeproject.org/files/ENCFF974AWJ/@@download/ENCFF974AWJ.bigWig hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF727MOG bigWig signal p-value ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 ENCFF513ZBH, ENCFF697EBC, ENCFF777FIV 681391571 ENCODE Processing Pipeline 5cc55e0d9645ca94d18f2c7b409296f8 https://www.encodeproject.org/files/ENCFF727MOG/@@download/ENCFF727MOG.bigWig hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF740WZP bigWig signal p-value ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 ENCFF092VSU, ENCFF513ZBH, ENCFF777FIV 613593186 ENCODE Processing Pipeline d5dd7c173a90fb3d37bee73f24d791c9 https://www.encodeproject.org/files/ENCFF740WZP/@@download/ENCFF740WZP.bigWig hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF454MFQ bed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF092VSU, ENCFF513ZBH, ENCFF697EBC, ENCFF777FIV 6400676 ENCODE Processing Pipeline 7d68e4ce346c8a44f63f8878c2a7b3fd https://www.encodeproject.org/files/ENCFF454MFQ/@@download/ENCFF454MFQ.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF740BDA bigBed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 ENCFF836SKU 10996696 ENCODE Processing Pipeline 6f40318c9e64b7172e48e002c5bc0653 https://www.encodeproject.org/files/ENCFF740BDA/@@download/ENCFF740BDA.bigBed hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF316ZBT bigBed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 ENCFF799MMA 13135183 ENCODE Processing Pipeline 37c24e7473f09e395b0d6fc56e468643 https://www.encodeproject.org/files/ENCFF316ZBT/@@download/ENCFF316ZBT.bigBed hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF253MUG bigBed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF454MFQ 13243890 ENCODE Processing Pipeline e1a8020ef07f3ca8e0f9e136a721a3fe https://www.encodeproject.org/files/ENCFF253MUG/@@download/ENCFF253MUG.bigBed hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF442AII bigWig fold change over control ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF092VSU, ENCFF513ZBH, ENCFF697EBC, ENCFF777FIV 688403930 ENCODE Processing Pipeline 2149b2df82cfba295257566e444fdc6c https://www.encodeproject.org/files/ENCFF442AII/@@download/ENCFF442AII.bigWig hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF863EUS bigWig fold change over control ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 ENCFF513ZBH, ENCFF697EBC, ENCFF777FIV 446121770 ENCODE Processing Pipeline a70210ad4396abdbec902abc4816c3ae https://www.encodeproject.org/files/ENCFF863EUS/@@download/ENCFF863EUS.bigWig hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF031TYY bed narrowPeak conservative idr thresholded peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF001TDO, ENCFF454MFQ, ENCFF799MMA, ENCFF836SKU 167872 ENCODE Processing Pipeline 6b186fa9eb84e4b964f124526a34df6b https://www.encodeproject.org/files/ENCFF031TYY/@@download/ENCFF031TYY.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF122POQ bigWig fold change over control ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 ENCFF092VSU, ENCFF513ZBH, ENCFF777FIV 432187408 ENCODE Processing Pipeline 44eed2e292afdee28e7901dcd1f355e6 https://www.encodeproject.org/files/ENCFF122POQ/@@download/ENCFF122POQ.bigWig hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF836SKU bed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 ENCFF513ZBH, ENCFF697EBC, ENCFF777FIV 5381323 ENCODE Processing Pipeline d585bead9e1e3f1a9aa5da5bbb2b3c93 https://www.encodeproject.org/files/ENCFF836SKU/@@download/ENCFF836SKU.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF799MMA bed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 ENCFF092VSU, ENCFF513ZBH, ENCFF777FIV 5877259 ENCODE Processing Pipeline dcb1d7b6ba2f33da62248a26ecb5f149 https://www.encodeproject.org/files/ENCFF799MMA/@@download/ENCFF799MMA.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF390ORN bigBed narrowPeak optimal idr thresholded peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF420YHY 476284 ENCODE Processing Pipeline e83d300cc561f23352f35c239d6f600e https://www.encodeproject.org/files/ENCFF390ORN/@@download/ENCFF390ORN.bigBed hg19 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF230YKN bigWig signal p-value ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 ENCFF554RCH, ENCFF754WTG, ENCFF966AVZ 732849606 ENCODE Processing Pipeline 2dfa68b671e1ad90951451b014f8f1ef https://www.encodeproject.org/files/ENCFF230YKN/@@download/ENCFF230YKN.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF935LZP bigWig signal p-value ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 ENCFF754WTG, ENCFF772ZLA, ENCFF966AVZ 592819923 ENCODE Processing Pipeline 1d4fe8c0c90fcf024ebbb9e512f4bf5b https://www.encodeproject.org/files/ENCFF935LZP/@@download/ENCFF935LZP.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF478FRH bigWig signal p-value ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF554RCH, ENCFF754WTG, ENCFF772ZLA, ENCFF966AVZ 783129977 ENCODE Processing Pipeline a7f6d20af3660d8c6c25deb0e2a3d195 https://www.encodeproject.org/files/ENCFF478FRH/@@download/ENCFF478FRH.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF711VLR bigWig fold change over control ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 ENCFF554RCH, ENCFF754WTG, ENCFF966AVZ 440877057 ENCODE Processing Pipeline 98d158d3b156dd5191ac1f9e6d5de7c5 https://www.encodeproject.org/files/ENCFF711VLR/@@download/ENCFF711VLR.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF945IOL bigWig fold change over control ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 ENCFF754WTG, ENCFF772ZLA, ENCFF966AVZ 427461668 ENCODE Processing Pipeline aefb1105a4eceb8c94c7b1a05cd280ca https://www.encodeproject.org/files/ENCFF945IOL/@@download/ENCFF945IOL.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF674GHR bigWig fold change over control ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF554RCH, ENCFF754WTG, ENCFF772ZLA, ENCFF966AVZ 713245454 ENCODE Processing Pipeline e916f08142836e5c55f322d9b1806e62 https://www.encodeproject.org/files/ENCFF674GHR/@@download/ENCFF674GHR.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF484UXN bed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 ENCFF754WTG, ENCFF772ZLA, ENCFF966AVZ 5691583 ENCODE Processing Pipeline ef01a24688242ee1e58c2d8681ce106e https://www.encodeproject.org/files/ENCFF484UXN/@@download/ENCFF484UXN.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF599RLK bigBed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF181ICO 13236138 ENCODE Processing Pipeline f43541d7cef9eb903d53c51fd6bde4ea https://www.encodeproject.org/files/ENCFF599RLK/@@download/ENCFF599RLK.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF650GEE bed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 ENCFF554RCH, ENCFF754WTG, ENCFF966AVZ 5166830 ENCODE Processing Pipeline 94edb79b81d90f09e2bad686137907ec https://www.encodeproject.org/files/ENCFF650GEE/@@download/ENCFF650GEE.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF181ICO bed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF554RCH, ENCFF754WTG, ENCFF772ZLA, ENCFF966AVZ 6130068 ENCODE Processing Pipeline d35fb1000ed64794716f066026558b0f https://www.encodeproject.org/files/ENCFF181ICO/@@download/ENCFF181ICO.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF801WCK bigBed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 2 ENCFF484UXN 13071703 ENCODE Processing Pipeline eef32405c68c4df8a2d78ad9b7b26df0 https://www.encodeproject.org/files/ENCFF801WCK/@@download/ENCFF801WCK.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF266DYD bigBed narrowPeak conservative idr thresholded peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF533MFQ 354041 ENCODE Processing Pipeline 15127f35da9155dc15c9659745e6d6fe https://www.encodeproject.org/files/ENCFF266DYD/@@download/ENCFF266DYD.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF949QBH bigBed narrowPeak peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1 ENCFF650GEE 10905871 ENCODE Processing Pipeline c1f8be7dbcefb7def1e01fed95bbd20a https://www.encodeproject.org/files/ENCFF949QBH/@@download/ENCFF949QBH.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF533MFQ bed narrowPeak conservative idr thresholded peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF181ICO, ENCFF419RSJ, ENCFF484UXN, ENCFF650GEE 173518 ENCODE Processing Pipeline a1dd3107317a2b7972727801e58eea61 https://www.encodeproject.org/files/ENCFF533MFQ/@@download/ENCFF533MFQ.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF417SVR bed narrowPeak optimal idr thresholded peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF181ICO, ENCFF419RSJ, ENCFF484UXN, ENCFF650GEE 205072 ENCODE Processing Pipeline b88d6c975642a609e014bcc85e010b4e https://www.encodeproject.org/files/ENCFF417SVR/@@download/ENCFF417SVR.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF520WAX bigBed narrowPeak optimal idr thresholded peaks ENCSR372GIN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBX5-human ENCAB150NID DNA False 2016-10-27 ENCODE 1, 2 ENCFF417SVR 476591 ENCODE Processing Pipeline b241e1995fdf8c1a34b1da9b2cd3b23b https://www.encodeproject.org/files/ENCFF520WAX/@@download/ENCFF520WAX.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, inconsistent platforms, low read depth, moderate library complexity ENCFF000PSS bam alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PTF 798342514 Richard Myers, HAIB af1342d412b75ae077029786759993aa https://www.encodeproject.org/files/ENCFF000PSS/@@download/ENCFF000PSS.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PSU bigBed broadPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UIG 439839 Richard Myers, HAIB d4a22bc6709b983094ecaf1ba8c67f2e https://www.encodeproject.org/files/ENCFF000PSU/@@download/ENCFF000PSU.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PSV bigBed broadPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UIH 337056 Richard Myers, HAIB a94886af6cadecc8f6b7f5f8fef23c83 https://www.encodeproject.org/files/ENCFF000PSV/@@download/ENCFF000PSV.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PSX bam alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PTI 1411287919 Richard Myers, HAIB 55fe38aebd657859d2209a2e3bc30f48 https://www.encodeproject.org/files/ENCFF000PSX/@@download/ENCFF000PSX.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PSZ bigWig raw signal ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 1 11306387 Richard Myers, HAIB 49d5411426f8a5a0adf298bffe19c55d https://www.encodeproject.org/files/ENCFF000PSZ/@@download/ENCFF000PSZ.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PTA bigWig raw signal ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 1 21742306 Richard Myers, HAIB 518410d77d01615df212cec11550fd0b https://www.encodeproject.org/files/ENCFF000PTA/@@download/ENCFF000PTA.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PTF fastq reads ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 801836511 Richard Myers, HAIB 36d570ab48a594a7f093a31722977e19 https://www.encodeproject.org/files/ENCFF000PTF/@@download/ENCFF000PTF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PTI fastq reads ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1546820083 Richard Myers, HAIB b9ac95aec6b37e78bd79c6c73149eb75 https://www.encodeproject.org/files/ENCFF000PTI/@@download/ENCFF000PTI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UIG bed broadPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 1 221657 Richard Myers, HAIB 05fe58a307c2500de872dea4054f5926 https://www.encodeproject.org/files/ENCFF001UIG/@@download/ENCFF001UIG.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UIH bed broadPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 1 150315 Richard Myers, HAIB 550c68b11981dbeec7efe851990f98d2 https://www.encodeproject.org/files/ENCFF001UIH/@@download/ENCFF001UIH.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CLK bed narrowPeak optimal idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 178287 ENCODE Consortium Analysis Working Group a00c93c5360f52a62646332b7f185658 https://www.encodeproject.org/files/ENCFF002CLK/@@download/ENCFF002CLK.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF548AFT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE ENCFF002CLK 376315 ENCODE Consortium ea2d7809c38d6315e0c425b636ff1f31 https://www.encodeproject.org/files/ENCFF548AFT/@@download/ENCFF548AFT.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF105MNZ bam alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PTF, ENCFF643CGH 508008558 ENCODE Processing Pipeline c5496b30d83209878e8cb3d59dd672ef https://www.encodeproject.org/files/ENCFF105MNZ/@@download/ENCFF105MNZ.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF506FSB bam unfiltered alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PTF, ENCFF643CGH 955018133 ENCODE Processing Pipeline 52e308376bd5205d95a7537affe9df1d https://www.encodeproject.org/files/ENCFF506FSB/@@download/ENCFF506FSB.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF527VCX bam unfiltered alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PTI, ENCFF643CGH 1509652051 ENCODE Processing Pipeline c3c7f7c5fb300382d311c7ec229cfe9e https://www.encodeproject.org/files/ENCFF527VCX/@@download/ENCFF527VCX.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF739SSM bam alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PTI, ENCFF643CGH 475947461 ENCODE Processing Pipeline c66536d58fb8982f872324199a3ad62b https://www.encodeproject.org/files/ENCFF739SSM/@@download/ENCFF739SSM.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF584DLG bam unfiltered alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PTF, ENCFF807MUK 952754518 ENCODE Processing Pipeline 2ec81d1438ad529d1dcd599cc25f78fa https://www.encodeproject.org/files/ENCFF584DLG/@@download/ENCFF584DLG.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF710MZA bam alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PTF, ENCFF807MUK 508341634 ENCODE Processing Pipeline 72978fda62a1e6e08182ea0b4b91f399 https://www.encodeproject.org/files/ENCFF710MZA/@@download/ENCFF710MZA.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF687KYQ bam unfiltered alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PTI, ENCFF807MUK 1504417774 ENCODE Processing Pipeline 806e9ecc0ee353059dc65b6da64e013a https://www.encodeproject.org/files/ENCFF687KYQ/@@download/ENCFF687KYQ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF030JIY bam alignments ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PTI, ENCFF807MUK 476261681 ENCODE Processing Pipeline dbd67bb82a1ce0eef26f366b0a2ca964 https://www.encodeproject.org/files/ENCFF030JIY/@@download/ENCFF030JIY.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF453YRO bigWig signal p-value ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF739SSM 416641893 ENCODE Processing Pipeline 883429548d00e4a1d34d498ff7b142c6 https://www.encodeproject.org/files/ENCFF453YRO/@@download/ENCFF453YRO.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF759BLY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF844ZVZ 362478 ENCODE Processing Pipeline 09b9dc343e25344135e1d97736c2d5da https://www.encodeproject.org/files/ENCFF759BLY/@@download/ENCFF759BLY.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF055OLH bigWig fold change over control ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF105MNZ, ENCFF175NMQ 271230904 ENCODE Processing Pipeline 907cf4044fead9e2ceff7407be022e29 https://www.encodeproject.org/files/ENCFF055OLH/@@download/ENCFF055OLH.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF213LLK bed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF739SSM 3925164 ENCODE Processing Pipeline a70c69021a8dd4cea3e339c8a162a489 https://www.encodeproject.org/files/ENCFF213LLK/@@download/ENCFF213LLK.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF106JIU bigBed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF143UEB 10983982 ENCODE Processing Pipeline c5536939def6e7cc02728798772b2690 https://www.encodeproject.org/files/ENCFF106JIU/@@download/ENCFF106JIU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF844ZVZ bed narrowPeak conservative idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF143UEB, ENCFF213LLK, ENCFF419RSJ, ENCFF423EJT 171260 ENCODE Processing Pipeline 2ef2ac36ea1f21128b0590e09d295925 https://www.encodeproject.org/files/ENCFF844ZVZ/@@download/ENCFF844ZVZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF845WVE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF953JQD 443291 ENCODE Processing Pipeline a65e0ca6afd76536f5a044411fff1088 https://www.encodeproject.org/files/ENCFF845WVE/@@download/ENCFF845WVE.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF601QSB bigWig fold change over control ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF739SSM 253312603 ENCODE Processing Pipeline c9e615b1ae0b27a005e6c718dd372a49 https://www.encodeproject.org/files/ENCFF601QSB/@@download/ENCFF601QSB.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF050UEE bigBed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF213LLK 8296546 ENCODE Processing Pipeline 92aafaed2300c448b2b34c707c37e6a6 https://www.encodeproject.org/files/ENCFF050UEE/@@download/ENCFF050UEE.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF798SFQ bigWig signal p-value ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF105MNZ, ENCFF175NMQ 441698484 ENCODE Processing Pipeline dda5fc6e672e2d52f307788c53eedeb6 https://www.encodeproject.org/files/ENCFF798SFQ/@@download/ENCFF798SFQ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF973TAL bigWig signal p-value ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF105MNZ, ENCFF175NMQ, ENCFF739SSM 489056682 ENCODE Processing Pipeline 7ee29098b85ebe275df790bd3937a5a2 https://www.encodeproject.org/files/ENCFF973TAL/@@download/ENCFF973TAL.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF842TXL bigWig fold change over control ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF105MNZ, ENCFF175NMQ, ENCFF739SSM 478078492 ENCODE Processing Pipeline 59aeb1271987a2f9b04ee05fafc54d74 https://www.encodeproject.org/files/ENCFF842TXL/@@download/ENCFF842TXL.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF423EJT bed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF105MNZ, ENCFF175NMQ 4204488 ENCODE Processing Pipeline 63a1a44e19959664c409b00006cd3008 https://www.encodeproject.org/files/ENCFF423EJT/@@download/ENCFF423EJT.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF143UEB bed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF105MNZ, ENCFF175NMQ, ENCFF739SSM 4878064 ENCODE Processing Pipeline b3aa30ea051fe0e303de77a21fcd92aa https://www.encodeproject.org/files/ENCFF143UEB/@@download/ENCFF143UEB.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF254SHQ bigBed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF423EJT 10228214 ENCODE Processing Pipeline 41a2eb53165d017167c168442174eb70 https://www.encodeproject.org/files/ENCFF254SHQ/@@download/ENCFF254SHQ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF953JQD bed narrowPeak optimal idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF143UEB, ENCFF213LLK, ENCFF419RSJ, ENCFF423EJT 227321 ENCODE Processing Pipeline a4d21133e751d41a9c6334a19196d13c https://www.encodeproject.org/files/ENCFF953JQD/@@download/ENCFF953JQD.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF392MFI bigWig signal p-value ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF030JIY, ENCFF382BNF 448358284 ENCODE Processing Pipeline a3a81d9c4bd8629e35f36e4d16b2ca55 https://www.encodeproject.org/files/ENCFF392MFI/@@download/ENCFF392MFI.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF247XOF bigWig fold change over control ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF030JIY, ENCFF382BNF, ENCFF710MZA 466469300 ENCODE Processing Pipeline 42d876f5aac957275eb547e86ac41f0d https://www.encodeproject.org/files/ENCFF247XOF/@@download/ENCFF247XOF.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF723SOG bigWig signal p-value ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF382BNF, ENCFF710MZA 530041254 ENCODE Processing Pipeline 3516fe334cdf3dd6a096641fc088b114 https://www.encodeproject.org/files/ENCFF723SOG/@@download/ENCFF723SOG.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF364GVC bigWig fold change over control ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF382BNF, ENCFF710MZA 271469576 ENCODE Processing Pipeline 22ee2d0da6be5466b4835dd925267095 https://www.encodeproject.org/files/ENCFF364GVC/@@download/ENCFF364GVC.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF331MUK bigWig signal p-value ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF030JIY, ENCFF382BNF, ENCFF710MZA 611968900 ENCODE Processing Pipeline 8f8de982aa4119f7766335c3f38a3193 https://www.encodeproject.org/files/ENCFF331MUK/@@download/ENCFF331MUK.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF443ZZV bigWig fold change over control ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF030JIY, ENCFF382BNF 253225932 ENCODE Processing Pipeline 34ff23870bbdbf5e3a8ed422d2a0a151 https://www.encodeproject.org/files/ENCFF443ZZV/@@download/ENCFF443ZZV.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF943IEY bigBed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF598OWM 8311695 ENCODE Processing Pipeline 416ec750e666570cf9694bb258617839 https://www.encodeproject.org/files/ENCFF943IEY/@@download/ENCFF943IEY.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF973ZCY bed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF382BNF, ENCFF710MZA 4248723 ENCODE Processing Pipeline d2d3bbbc4cb7e5e3e6bbb5b17306c535 https://www.encodeproject.org/files/ENCFF973ZCY/@@download/ENCFF973ZCY.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF598OWM bed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF030JIY, ENCFF382BNF 3937689 ENCODE Processing Pipeline 39eb24fb2ec92133b5b20f3428aa7fac https://www.encodeproject.org/files/ENCFF598OWM/@@download/ENCFF598OWM.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF525ETQ bed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF030JIY, ENCFF382BNF, ENCFF710MZA 4949888 ENCODE Processing Pipeline 6ba616590bcdd6212446809eb9dad9ef https://www.encodeproject.org/files/ENCFF525ETQ/@@download/ENCFF525ETQ.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF819YVX bigBed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF973ZCY 10264317 ENCODE Processing Pipeline fe4cabe6f617ec1c552f2cefb8d06c0e https://www.encodeproject.org/files/ENCFF819YVX/@@download/ENCFF819YVX.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF264LQE bed narrowPeak optimal idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF525ETQ, ENCFF598OWM, ENCFF973ZCY 225076 ENCODE Processing Pipeline 7ceb1eb4f2ead35aceb6dac50379a772 https://www.encodeproject.org/files/ENCFF264LQE/@@download/ENCFF264LQE.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF042ELI bigBed narrowPeak peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF525ETQ 11034718 ENCODE Processing Pipeline efa2e8fac53eccae6e1fac429da59020 https://www.encodeproject.org/files/ENCFF042ELI/@@download/ENCFF042ELI.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF447GXV bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF363GGS 364789 ENCODE Processing Pipeline 75e40adf4ade6fd5b7243f029569b9c4 https://www.encodeproject.org/files/ENCFF447GXV/@@download/ENCFF447GXV.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF363GGS bed narrowPeak conservative idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF525ETQ, ENCFF598OWM, ENCFF973ZCY 173135 ENCODE Processing Pipeline f0461b0e0400f8205054a39bfcff64c9 https://www.encodeproject.org/files/ENCFF363GGS/@@download/ENCFF363GGS.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF791JQI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF264LQE 439901 ENCODE Processing Pipeline 6561d72ff9b40592d9621e14d6e76ec1 https://www.encodeproject.org/files/ENCFF791JQI/@@download/ENCFF791JQI.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000RBE bam alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000RBN 715308457 Richard Myers, HAIB 42f346a7aade3757310a52150f01bb7d https://www.encodeproject.org/files/ENCFF000RBE/@@download/ENCFF000RBE.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000RBF bam alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000RBS 1673765421 Richard Myers, HAIB 80018e02dd4b48efaed966a6219572cb https://www.encodeproject.org/files/ENCFF000RBF/@@download/ENCFF000RBF.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000RBG bigBed broadPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UPZ 1086952 Richard Myers, HAIB 0962069007892836f6f884a82515a648 https://www.encodeproject.org/files/ENCFF000RBG/@@download/ENCFF000RBG.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000RBH bigBed broadPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UQA 1644626 Richard Myers, HAIB ebbf78e7917d370f7f0eaafca948c7bc https://www.encodeproject.org/files/ENCFF000RBH/@@download/ENCFF000RBH.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000RBJ bigWig raw signal ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 23055068 Richard Myers, HAIB 0901a841794e6df090a9d90e3ae5c8be https://www.encodeproject.org/files/ENCFF000RBJ/@@download/ENCFF000RBJ.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000RBL bigWig raw signal ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 71063295 Richard Myers, HAIB 0f9bd8b57ca090745a0198d026066c93 https://www.encodeproject.org/files/ENCFF000RBL/@@download/ENCFF000RBL.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000RBN fastq reads ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 551448102 Richard Myers, HAIB c212192e7770ef3c40ae91cebf5520f4 https://www.encodeproject.org/files/ENCFF000RBN/@@download/ENCFF000RBN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RCB/ released low read length, low read depth biological replicates with identical biosample ENCFF000RBS fastq reads ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1680079004 Richard Myers, HAIB d492572cdd6f737ea9994e2dc2ba2573 https://www.encodeproject.org/files/ENCFF000RBS/@@download/ENCFF000RBS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RCC/ released low read length, low read depth biological replicates with identical biosample ENCFF001UPZ bed broadPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 563234 Richard Myers, HAIB 395ee7b840a1e9c2eecd21206342af6a https://www.encodeproject.org/files/ENCFF001UPZ/@@download/ENCFF001UPZ.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UQA bed broadPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 1052296 Richard Myers, HAIB 3948a8cd11552835f242687f0080807e https://www.encodeproject.org/files/ENCFF001UQA/@@download/ENCFF001UQA.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CNL bed narrowPeak optimal idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 570626 ENCODE Consortium Analysis Working Group 02ec64e92c3161603e7a04d225eae2a0 https://www.encodeproject.org/files/ENCFF002CNL/@@download/ENCFF002CNL.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF733KJJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE ENCFF002CNL 1197622 ENCODE Consortium bac13be5ad89581f0ede8fa1d6fcd87f https://www.encodeproject.org/files/ENCFF733KJJ/@@download/ENCFF733KJJ.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF349HCP bam unfiltered alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RBN, ENCFF643CGH 753062707 ENCODE Processing Pipeline ca3735e1ce044111e89789d820806af0 https://www.encodeproject.org/files/ENCFF349HCP/@@download/ENCFF349HCP.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF100TXJ bam alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RBN, ENCFF643CGH 535555023 ENCODE Processing Pipeline 141fe35a8d73f4405db090f1133bf1a0 https://www.encodeproject.org/files/ENCFF100TXJ/@@download/ENCFF100TXJ.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF324PAU bam unfiltered alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RBS, ENCFF643CGH 1817277660 ENCODE Processing Pipeline db333c81b94d38dcb6d24ea2cee11ed9 https://www.encodeproject.org/files/ENCFF324PAU/@@download/ENCFF324PAU.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF521NVH bam alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RBS, ENCFF643CGH 1214649753 ENCODE Processing Pipeline a90a2898e51b63b2369e15fa7a751d0d https://www.encodeproject.org/files/ENCFF521NVH/@@download/ENCFF521NVH.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF993IJH bam alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RBN, ENCFF807MUK 535892345 ENCODE Processing Pipeline a5d82a8bc157aa10e19103ce4ca98926 https://www.encodeproject.org/files/ENCFF993IJH/@@download/ENCFF993IJH.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF315KUF bam unfiltered alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RBN, ENCFF807MUK 751910671 ENCODE Processing Pipeline 8a165224a0f7083f94c50407e11cf66b https://www.encodeproject.org/files/ENCFF315KUF/@@download/ENCFF315KUF.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF438AKY bam unfiltered alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RBS, ENCFF807MUK 1814269138 ENCODE Processing Pipeline 043cedbd02d081b502f536f66805840f https://www.encodeproject.org/files/ENCFF438AKY/@@download/ENCFF438AKY.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF611YAM bam alignments ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RBS, ENCFF807MUK 1215420345 ENCODE Processing Pipeline a409f6a9251861e94206c11ae47d4c1f https://www.encodeproject.org/files/ENCFF611YAM/@@download/ENCFF611YAM.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF426TCW bigWig signal p-value ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF100TXJ, ENCFF118ENS 486991920 ENCODE Processing Pipeline e8962ba41ee8daeee8dd73606ed50360 https://www.encodeproject.org/files/ENCFF426TCW/@@download/ENCFF426TCW.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF870RJS bigWig signal p-value ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100TXJ, ENCFF118ENS, ENCFF521NVH, ENCFF798ORT 894822862 ENCODE Processing Pipeline 80268f92d21623427be6fcff63e7d3ca https://www.encodeproject.org/files/ENCFF870RJS/@@download/ENCFF870RJS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF339KEZ bigWig signal p-value ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF521NVH, ENCFF798ORT 906259349 ENCODE Processing Pipeline c3f64dc096ff9fd2a1d9e02c9294285d https://www.encodeproject.org/files/ENCFF339KEZ/@@download/ENCFF339KEZ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF009YSQ bigWig fold change over control ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF100TXJ, ENCFF118ENS 270232964 ENCODE Processing Pipeline 50d836704d84bdb4562df6997d1d5a0c https://www.encodeproject.org/files/ENCFF009YSQ/@@download/ENCFF009YSQ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF520ZUL bed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF521NVH, ENCFF798ORT 6646997 ENCODE Processing Pipeline e484ab8053bf9ee5160dbb23652bc88b https://www.encodeproject.org/files/ENCFF520ZUL/@@download/ENCFF520ZUL.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF818NEX bed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100TXJ, ENCFF118ENS, ENCFF521NVH, ENCFF798ORT 6772190 ENCODE Processing Pipeline 9c58068e4d83e8722de438a25a7300f0 https://www.encodeproject.org/files/ENCFF818NEX/@@download/ENCFF818NEX.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF034KAQ bed narrowPeak conservative idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF201OOO, ENCFF419RSJ, ENCFF520ZUL, ENCFF818NEX 456802 ENCODE Processing Pipeline 76b7fc3a82680c5861941333e9a0c31b https://www.encodeproject.org/files/ENCFF034KAQ/@@download/ENCFF034KAQ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF602NKU bigWig fold change over control ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100TXJ, ENCFF118ENS, ENCFF521NVH, ENCFF798ORT 853042812 ENCODE Processing Pipeline ee72be6779e55ca028cd89c612a50ab9 https://www.encodeproject.org/files/ENCFF602NKU/@@download/ENCFF602NKU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF713IPG bigWig fold change over control ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF521NVH, ENCFF798ORT 652522031 ENCODE Processing Pipeline 280671fd85d62cfa2a257af8710a45b8 https://www.encodeproject.org/files/ENCFF713IPG/@@download/ENCFF713IPG.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF201OOO bed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF100TXJ, ENCFF118ENS 6228546 ENCODE Processing Pipeline 81ab617465d6200887608eddc8ebb46b https://www.encodeproject.org/files/ENCFF201OOO/@@download/ENCFF201OOO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF856TJX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF034KAQ 994032 ENCODE Processing Pipeline 845e4f866d3056c2857dcfa0ecb774f1 https://www.encodeproject.org/files/ENCFF856TJX/@@download/ENCFF856TJX.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF006ZHG bigBed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF520ZUL 12323393 ENCODE Processing Pipeline b3a0277c67c15ce9ebc418f3b5eb3404 https://www.encodeproject.org/files/ENCFF006ZHG/@@download/ENCFF006ZHG.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF122DSG bigBed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF201OOO 12219930 ENCODE Processing Pipeline 61d20a40d885568748a2151c17dd27b2 https://www.encodeproject.org/files/ENCFF122DSG/@@download/ENCFF122DSG.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF617KIQ bigBed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF818NEX 12248887 ENCODE Processing Pipeline 959eaa147b149017c986fdfca7058c56 https://www.encodeproject.org/files/ENCFF617KIQ/@@download/ENCFF617KIQ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF656VCS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF501PQI 1245768 ENCODE Processing Pipeline 93cb3d847775a3eef626b721c7ec3c04 https://www.encodeproject.org/files/ENCFF656VCS/@@download/ENCFF656VCS.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF501PQI bed narrowPeak optimal idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF201OOO, ENCFF419RSJ, ENCFF520ZUL, ENCFF818NEX 618788 ENCODE Processing Pipeline d90e984aa456d2e745c596ad349c609d https://www.encodeproject.org/files/ENCFF501PQI/@@download/ENCFF501PQI.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF797XXH bigWig signal p-value ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF080EVD, ENCFF993IJH 407871886 ENCODE Processing Pipeline 80b052a89e24cbff48d3b6bb53a55561 https://www.encodeproject.org/files/ENCFF797XXH/@@download/ENCFF797XXH.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF167CJH bigWig fold change over control ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF080EVD, ENCFF993IJH 271382172 ENCODE Processing Pipeline af050f2fb3f111ea8f98c299c7839d64 https://www.encodeproject.org/files/ENCFF167CJH/@@download/ENCFF167CJH.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF941QWH bigWig signal p-value ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF080EVD, ENCFF611YAM, ENCFF725UGE 878571535 ENCODE Processing Pipeline e81b66cebab03a3191c27b5dc24451b7 https://www.encodeproject.org/files/ENCFF941QWH/@@download/ENCFF941QWH.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF521MMQ bed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF080EVD, ENCFF611YAM, ENCFF725UGE, ENCFF993IJH 6846875 ENCODE Processing Pipeline 1b598364ba17575c3cfbfa419aabb916 https://www.encodeproject.org/files/ENCFF521MMQ/@@download/ENCFF521MMQ.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF230DMM bed narrowPeak optimal idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF521MMQ, ENCFF784BHQ, ENCFF927MZZ 624914 ENCODE Processing Pipeline 397c2bbc368f84d16938fb2e507d69fe https://www.encodeproject.org/files/ENCFF230DMM/@@download/ENCFF230DMM.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF784BHQ bed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF080EVD, ENCFF993IJH 6213589 ENCODE Processing Pipeline fa4df9b4f771ab42cb0fa07d0fcca532 https://www.encodeproject.org/files/ENCFF784BHQ/@@download/ENCFF784BHQ.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF503NAI bigBed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF784BHQ 12194221 ENCODE Processing Pipeline 7b4aa3466cd672cfe5b839aed8c3cc32 https://www.encodeproject.org/files/ENCFF503NAI/@@download/ENCFF503NAI.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF886QMR bigBed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF927MZZ 12372664 ENCODE Processing Pipeline 997e58789e2fc4244c04f6f25e21378f https://www.encodeproject.org/files/ENCFF886QMR/@@download/ENCFF886QMR.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF509TGF bigBed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF521MMQ 12345772 ENCODE Processing Pipeline d73f98b0625d030dc0972f723d7b8f5a https://www.encodeproject.org/files/ENCFF509TGF/@@download/ENCFF509TGF.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF398RJY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF901VZE 990370 ENCODE Processing Pipeline b933738c01ccacd63699b6ac15e3c7eb https://www.encodeproject.org/files/ENCFF398RJY/@@download/ENCFF398RJY.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF091UNG bigWig fold change over control ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF080EVD, ENCFF611YAM, ENCFF725UGE 658305198 ENCODE Processing Pipeline be3cea71deb1c4ba8a410216c9a186b3 https://www.encodeproject.org/files/ENCFF091UNG/@@download/ENCFF091UNG.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF576HVS bigWig fold change over control ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF080EVD, ENCFF611YAM, ENCFF725UGE, ENCFF993IJH 846220076 ENCODE Processing Pipeline 6adac3a75dd84ab52431990f76131b62 https://www.encodeproject.org/files/ENCFF576HVS/@@download/ENCFF576HVS.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF143OIT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF230DMM 1255574 ENCODE Processing Pipeline 671d091344d498f09bbd4ae1752c662a https://www.encodeproject.org/files/ENCFF143OIT/@@download/ENCFF143OIT.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF922VQZ bigWig signal p-value ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF080EVD, ENCFF611YAM, ENCFF725UGE, ENCFF993IJH 907859765 ENCODE Processing Pipeline 9041da00b6fe7865f141b3004988e7b6 https://www.encodeproject.org/files/ENCFF922VQZ/@@download/ENCFF922VQZ.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF927MZZ bed narrowPeak peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF080EVD, ENCFF611YAM, ENCFF725UGE 6693836 ENCODE Processing Pipeline bec9011d554003cd3d853fa696ac5c5c https://www.encodeproject.org/files/ENCFF927MZZ/@@download/ENCFF927MZZ.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF901VZE bed narrowPeak conservative idr thresholded peaks ENCSR000BPA ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF521MMQ, ENCFF784BHQ, ENCFF927MZZ 454716 ENCODE Processing Pipeline 8cccc6d8e376f1a8c2a21f4b0260f617 https://www.encodeproject.org/files/ENCFF901VZE/@@download/ENCFF901VZE.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF000OKP bam alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OLB 739289838 Richard Myers, HAIB 460c28a1966d963e8d6be6a72f699904 https://www.encodeproject.org/files/ENCFF000OKP/@@download/ENCFF000OKP.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OKQ bigBed broadPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAK 1196049 Richard Myers, HAIB 7138d9d591eacb233565927d9d2ad909 https://www.encodeproject.org/files/ENCFF000OKQ/@@download/ENCFF000OKQ.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OKR bigBed broadPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAL 1169973 Richard Myers, HAIB 7d750a7271416aa8cb7c8597d2118f0c https://www.encodeproject.org/files/ENCFF000OKR/@@download/ENCFF000OKR.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OKS bam alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OLD 890027103 Richard Myers, HAIB 71161f1ffd2a23989d8da013a6f2a282 https://www.encodeproject.org/files/ENCFF000OKS/@@download/ENCFF000OKS.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OKV bigWig raw signal ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF000OKP 32282124 Richard Myers, HAIB 25163df196e8f148dd31679524b5c378 https://www.encodeproject.org/files/ENCFF000OKV/@@download/ENCFF000OKV.bigWig hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OKW bigWig raw signal ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF000OKS 39588222 Richard Myers, HAIB b9a004f1082f7e15453fd6f58061c6f6 https://www.encodeproject.org/files/ENCFF000OKW/@@download/ENCFF000OKW.bigWig hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OLB fastq reads ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 948955127 Richard Myers, HAIB 67d05368e3c8ac6c1d9fd5031a559047 https://www.encodeproject.org/files/ENCFF000OLB/@@download/ENCFF000OLB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLW/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OLD fastq reads ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 910168970 Richard Myers, HAIB ccebd6ca4cc4b8c9bc7a23652e44bfcd https://www.encodeproject.org/files/ENCFF000OLD/@@download/ENCFF000OLD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLW/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001UAK bed broadPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF000OKP 629757 Richard Myers, HAIB 861fa4afce5b8c6d73fd0d11b50d1eac https://www.encodeproject.org/files/ENCFF001UAK/@@download/ENCFF001UAK.bed.gz hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001UAL bed broadPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF000OKS 619388 Richard Myers, HAIB 46525140928bb9219d933abb3506e96f https://www.encodeproject.org/files/ENCFF001UAL/@@download/ENCFF001UAL.bed.gz hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF002CIN bed narrowPeak optimal idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 364520 ENCODE Consortium Analysis Working Group a23515b20a50e28b6eea4bb5a2cd1168 https://www.encodeproject.org/files/ENCFF002CIN/@@download/ENCFF002CIN.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF190WTA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE ENCFF002CIN 894675 ENCODE Consortium 7bc72eddfc7898b15defb766b06d64fd https://www.encodeproject.org/files/ENCFF190WTA/@@download/ENCFF190WTA.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF449ZGE bam alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OLB, ENCFF643CGH 530038680 ENCODE Processing Pipeline dc45a3930bf160f7e5ecd00276c927f6 https://www.encodeproject.org/files/ENCFF449ZGE/@@download/ENCFF449ZGE.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF275YFP bam unfiltered alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OLB, ENCFF643CGH 1155277386 ENCODE Processing Pipeline df96f1e5881fc5df47d0b07d3693f827 https://www.encodeproject.org/files/ENCFF275YFP/@@download/ENCFF275YFP.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF060BGI bam unfiltered alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLD, ENCFF643CGH 1162653461 ENCODE Processing Pipeline b698c74560495f3b7270ae90dfc6d2b0 https://www.encodeproject.org/files/ENCFF060BGI/@@download/ENCFF060BGI.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF392PMX bam alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLD, ENCFF643CGH 724966904 ENCODE Processing Pipeline f07d1926c2f95cecabbfb7c8c2e781e2 https://www.encodeproject.org/files/ENCFF392PMX/@@download/ENCFF392PMX.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF175MGW bam unfiltered alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OLB, ENCFF807MUK 1153689268 ENCODE Processing Pipeline bf22b3cf8a30b15abdc878c3cef35684 https://www.encodeproject.org/files/ENCFF175MGW/@@download/ENCFF175MGW.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF267TLE bam alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OLB, ENCFF807MUK 527290791 ENCODE Processing Pipeline 7529192b314c72ac21b040e20a5a67ef https://www.encodeproject.org/files/ENCFF267TLE/@@download/ENCFF267TLE.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF471ELF bam unfiltered alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLD, ENCFF807MUK 1162697912 ENCODE Processing Pipeline c9bf94b97afda1d8c068bd567979b960 https://www.encodeproject.org/files/ENCFF471ELF/@@download/ENCFF471ELF.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF372NSY bam alignments ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLD, ENCFF807MUK 717760471 ENCODE Processing Pipeline 91ffa16adb00261b914dbe5ae7315e7e https://www.encodeproject.org/files/ENCFF372NSY/@@download/ENCFF372NSY.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF543QDS bed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF267TLE, ENCFF671VNQ 6083883 ENCODE Processing Pipeline 7fcc09f4a892823e19ab94a20f075c45 https://www.encodeproject.org/files/ENCFF543QDS/@@download/ENCFF543QDS.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF430MIT bed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF372NSY, ENCFF671VNQ 6352567 ENCODE Processing Pipeline c70736f8d80e28fc79b8d0957d92645b https://www.encodeproject.org/files/ENCFF430MIT/@@download/ENCFF430MIT.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF607DET bigWig signal p-value ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF392PMX, ENCFF860NWP 315726953 ENCODE Processing Pipeline 326323e1dc512003efabb10c649ce41e https://www.encodeproject.org/files/ENCFF607DET/@@download/ENCFF607DET.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF515RRG bigWig signal p-value ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF267TLE, ENCFF671VNQ 279179527 ENCODE Processing Pipeline 2aa0599a70575ea730b34c12075f5c4d https://www.encodeproject.org/files/ENCFF515RRG/@@download/ENCFF515RRG.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF970JDX bigWig fold change over control ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF267TLE, ENCFF372NSY, ENCFF671VNQ 367495110 ENCODE Processing Pipeline b7acf3b579d0666b45c71cff4741cc4a https://www.encodeproject.org/files/ENCFF970JDX/@@download/ENCFF970JDX.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF871AAI bigBed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF543QDS 11617357 ENCODE Processing Pipeline c0b9cb3a029f2d4ebe8d7c9c7881c4f7 https://www.encodeproject.org/files/ENCFF871AAI/@@download/ENCFF871AAI.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF387PIC bigWig fold change over control ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF392PMX, ENCFF860NWP 257389105 ENCODE Processing Pipeline 009a44944137db32a88f824498fc4467 https://www.encodeproject.org/files/ENCFF387PIC/@@download/ENCFF387PIC.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF270QSP bed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF392PMX, ENCFF860NWP 6501545 ENCODE Processing Pipeline 77eb0a84dc9d81dcca143c52d1fc7c0d https://www.encodeproject.org/files/ENCFF270QSP/@@download/ENCFF270QSP.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF693CVG bigWig signal p-value ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF267TLE, ENCFF372NSY, ENCFF671VNQ 300135640 ENCODE Processing Pipeline 1e518c4d8346bfcd984c7812992b2b3d https://www.encodeproject.org/files/ENCFF693CVG/@@download/ENCFF693CVG.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF635IUV bigWig signal p-value ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF449ZGE, ENCFF860NWP 276550445 ENCODE Processing Pipeline 90958009247ae0300527305062544bcb https://www.encodeproject.org/files/ENCFF635IUV/@@download/ENCFF635IUV.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF647NER bigWig fold change over control ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF372NSY, ENCFF671VNQ 252826208 ENCODE Processing Pipeline a6283af47d8d61de198060d2f121576e https://www.encodeproject.org/files/ENCFF647NER/@@download/ENCFF647NER.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF249RDV bigWig signal p-value ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF392PMX, ENCFF449ZGE, ENCFF860NWP 300634898 ENCODE Processing Pipeline 4fbccb6571cd4259492a609c868772e7 https://www.encodeproject.org/files/ENCFF249RDV/@@download/ENCFF249RDV.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF581BJH bigBed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF430MIT 11920930 ENCODE Processing Pipeline 7ebeca540358f7f0091a73dc5ef92da0 https://www.encodeproject.org/files/ENCFF581BJH/@@download/ENCFF581BJH.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF847PLW bed narrowPeak conservative idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF400PXF, ENCFF430MIT, ENCFF543QDS 445188 ENCODE Processing Pipeline ac220d6b8f004c2e6d3b9cb3854e234e https://www.encodeproject.org/files/ENCFF847PLW/@@download/ENCFF847PLW.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF366RSZ bigWig fold change over control ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF267TLE, ENCFF671VNQ 173533751 ENCODE Processing Pipeline 204b5a68ffbfa2d433ad0e7261edff8f https://www.encodeproject.org/files/ENCFF366RSZ/@@download/ENCFF366RSZ.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF690UZF bigWig fold change over control ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF449ZGE, ENCFF860NWP 173675644 ENCODE Processing Pipeline d82e15a17369c1dafd0e42fdf659e4e7 https://www.encodeproject.org/files/ENCFF690UZF/@@download/ENCFF690UZF.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF400PXF bed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF267TLE, ENCFF372NSY, ENCFF671VNQ 6869843 ENCODE Processing Pipeline 175c77f97a758fbd14eb8c9869cb15ff https://www.encodeproject.org/files/ENCFF400PXF/@@download/ENCFF400PXF.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF500ZIR bed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF392PMX, ENCFF449ZGE, ENCFF860NWP 6849065 ENCODE Processing Pipeline 0899d1d416fab6d80ea91eb2007a6ba4 https://www.encodeproject.org/files/ENCFF500ZIR/@@download/ENCFF500ZIR.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF731FHM bigWig signal p-value ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF372NSY, ENCFF671VNQ 314982172 ENCODE Processing Pipeline 80cf9b0f14d8b47882eedec74c96e915 https://www.encodeproject.org/files/ENCFF731FHM/@@download/ENCFF731FHM.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF108LPM bed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF449ZGE, ENCFF860NWP 6006665 ENCODE Processing Pipeline ad10982e4d0ca93f23aae34d46d4a4f3 https://www.encodeproject.org/files/ENCFF108LPM/@@download/ENCFF108LPM.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF084UDY bigBed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF270QSP 12100546 ENCODE Processing Pipeline 8f8cae6da6c08befe87a5298cb7479e5 https://www.encodeproject.org/files/ENCFF084UDY/@@download/ENCFF084UDY.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF318AAV bigBed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF500ZIR 11825858 ENCODE Processing Pipeline 2ea6f3337065332ee4bcfd356c24d9d7 https://www.encodeproject.org/files/ENCFF318AAV/@@download/ENCFF318AAV.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF484MOG bigWig fold change over control ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF392PMX, ENCFF449ZGE, ENCFF860NWP 378496046 ENCODE Processing Pipeline 9ff119beb4cacb1b81e86426a2872c4c https://www.encodeproject.org/files/ENCFF484MOG/@@download/ENCFF484MOG.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF814QXW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF847PLW 1001315 ENCODE Processing Pipeline a1dea2a52968e603b64cba84120e5371 https://www.encodeproject.org/files/ENCFF814QXW/@@download/ENCFF814QXW.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF271KDK bed narrowPeak optimal idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF400PXF, ENCFF430MIT, ENCFF543QDS 477817 ENCODE Processing Pipeline f08e699a0cdd86fc32a5ced82408f769 https://www.encodeproject.org/files/ENCFF271KDK/@@download/ENCFF271KDK.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF032ZJL bigBed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF400PXF 11855717 ENCODE Processing Pipeline ceeae6259793cf2415d7b40acc568495 https://www.encodeproject.org/files/ENCFF032ZJL/@@download/ENCFF032ZJL.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF702ZPH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF271KDK 1056194 ENCODE Processing Pipeline 89fe24ca4e48ccc7059a5a92ecd674d4 https://www.encodeproject.org/files/ENCFF702ZPH/@@download/ENCFF702ZPH.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF543ITW bed narrowPeak conservative idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF108LPM, ENCFF270QSP, ENCFF419RSJ, ENCFF500ZIR 447376 ENCODE Processing Pipeline 8e0656165a214aac04943ab28e4336b4 https://www.encodeproject.org/files/ENCFF543ITW/@@download/ENCFF543ITW.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF038FGJ bigBed narrowPeak peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF108LPM 11509860 ENCODE Processing Pipeline b7717ca2435570caf2ffdf4a005f5c9f https://www.encodeproject.org/files/ENCFF038FGJ/@@download/ENCFF038FGJ.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF129ZZX bed narrowPeak optimal idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF108LPM, ENCFF270QSP, ENCFF419RSJ, ENCFF500ZIR 479674 ENCODE Processing Pipeline cdd96fb754fb0c04e0c9ed49dd4be8d9 https://www.encodeproject.org/files/ENCFF129ZZX/@@download/ENCFF129ZZX.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF986OBN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF543ITW 1002948 ENCODE Processing Pipeline 8c766b547c3f5425159a6a8dc31256a3 https://www.encodeproject.org/files/ENCFF986OBN/@@download/ENCFF986OBN.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF292SJG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIA ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF129ZZX 1056140 ENCODE Processing Pipeline df4db16fa473a4f5e1b19534c4f6e5a0 https://www.encodeproject.org/files/ENCFF292SJG/@@download/ENCFF292SJG.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PFE bam alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PFQ 914630742 Richard Myers, HAIB 85bb27c102086c9fd6a228c77d00a4b5 https://www.encodeproject.org/files/ENCFF000PFE/@@download/ENCFF000PFE.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PFF bigBed broadPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFE 112803 Richard Myers, HAIB 2ed6a98060494e6328a20813ba856f12 https://www.encodeproject.org/files/ENCFF000PFF/@@download/ENCFF000PFF.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PFG bigBed broadPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFF 70395 Richard Myers, HAIB 46c54fdc6cf1bc4d2cf9552d8829618b https://www.encodeproject.org/files/ENCFF000PFG/@@download/ENCFF000PFG.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PFH bam alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PFR 987000241 Richard Myers, HAIB a437ba955d4fe17e87effb395f232121 https://www.encodeproject.org/files/ENCFF000PFH/@@download/ENCFF000PFH.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PFI bigWig raw signal ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 10590185 Richard Myers, HAIB b490cabd07ed064d50731f68f99ae70e https://www.encodeproject.org/files/ENCFF000PFI/@@download/ENCFF000PFI.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PFK bigWig raw signal ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 4501816 Richard Myers, HAIB 8475e51562ed8208d3ac4d5f82e028f3 https://www.encodeproject.org/files/ENCFF000PFK/@@download/ENCFF000PFK.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PFQ fastq reads ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 829291500 Richard Myers, HAIB 68f04d34cd7f9e6178652f5ef9faaa12 https://www.encodeproject.org/files/ENCFF000PFQ/@@download/ENCFF000PFQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PFR fastq reads ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 828923243 Richard Myers, HAIB bfeb6431e7a44af4b11da6b52d628f5e https://www.encodeproject.org/files/ENCFF000PFR/@@download/ENCFF000PFR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UFE bed broadPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 47706 Richard Myers, HAIB b5219d8cfc05b6ae86925a4833fac303 https://www.encodeproject.org/files/ENCFF001UFE/@@download/ENCFF001UFE.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UFF bed broadPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 16373 Richard Myers, HAIB 03c9b9fa87f6fb913e2655557193e9d7 https://www.encodeproject.org/files/ENCFF001UFF/@@download/ENCFF001UFF.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CKB bed narrowPeak optimal idr thresholded peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 83386 ENCODE Consortium Analysis Working Group 8db7f95c02a98255bad497b3abcab3d2 https://www.encodeproject.org/files/ENCFF002CKB/@@download/ENCFF002CKB.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF142PTR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE ENCFF002CKB 230595 ENCODE Consortium 575d25b157229c029aa8e55559bc3ae0 https://www.encodeproject.org/files/ENCFF142PTR/@@download/ENCFF142PTR.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF471RBZ bam unfiltered alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFQ, ENCFF643CGH 1110920075 ENCODE Processing Pipeline 74cd4b3e4823172ee3efe1981b1cd7b5 https://www.encodeproject.org/files/ENCFF471RBZ/@@download/ENCFF471RBZ.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF911WGI bam alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFQ, ENCFF643CGH 562771764 ENCODE Processing Pipeline 4b651f52f119b30d33940d9d1224dad7 https://www.encodeproject.org/files/ENCFF911WGI/@@download/ENCFF911WGI.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF511CYT bam unfiltered alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFR, ENCFF643CGH 1198387451 ENCODE Processing Pipeline 4f355d71fce85cf6c50223ce8347a986 https://www.encodeproject.org/files/ENCFF511CYT/@@download/ENCFF511CYT.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF357WAY bam alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFR, ENCFF643CGH 768642692 ENCODE Processing Pipeline 4a0cf377d30c9b90bdd5c2568929a35e https://www.encodeproject.org/files/ENCFF357WAY/@@download/ENCFF357WAY.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF767KYS bam unfiltered alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFQ, ENCFF807MUK 1106034622 ENCODE Processing Pipeline d501ccb0e81a74237f8f1dea639232bb https://www.encodeproject.org/files/ENCFF767KYS/@@download/ENCFF767KYS.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF847HLX bam unfiltered alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFR, ENCFF807MUK 1193332226 ENCODE Processing Pipeline 8bb87935d573b7a59f3e65cd3ca1d195 https://www.encodeproject.org/files/ENCFF847HLX/@@download/ENCFF847HLX.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF081GVK bam alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFR, ENCFF807MUK 768923803 ENCODE Processing Pipeline d4f98d7bea55ad5423605f02a12991ee https://www.encodeproject.org/files/ENCFF081GVK/@@download/ENCFF081GVK.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF906RQV bam alignments ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFQ, ENCFF807MUK 563089241 ENCODE Processing Pipeline e5ec87ad5e45fd477bb067b947dee0fa https://www.encodeproject.org/files/ENCFF906RQV/@@download/ENCFF906RQV.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF202LXJ bigWig signal p-value ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF911WGI, ENCFF943DZB 605161689 ENCODE Processing Pipeline ad955879b381f4e59750587ac6d91dab https://www.encodeproject.org/files/ENCFF202LXJ/@@download/ENCFF202LXJ.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF115JHP bigWig signal p-value ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF357WAY, ENCFF943DZB 574752179 ENCODE Processing Pipeline 9bec8151b4781cee762ab487668a4a69 https://www.encodeproject.org/files/ENCFF115JHP/@@download/ENCFF115JHP.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF886OFY bigWig signal p-value ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF357WAY, ENCFF911WGI, ENCFF943DZB 956214552 ENCODE Processing Pipeline a795199db3d8cc32bbb7753a3d04c533 https://www.encodeproject.org/files/ENCFF886OFY/@@download/ENCFF886OFY.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF691DUF bigWig fold change over control ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF357WAY, ENCFF943DZB 578103208 ENCODE Processing Pipeline d104772ea1476e49114954fa995954e6 https://www.encodeproject.org/files/ENCFF691DUF/@@download/ENCFF691DUF.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF047ANU bigWig fold change over control ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF911WGI, ENCFF943DZB 380579070 ENCODE Processing Pipeline 22d95cf34bc2983da8c7537355130651 https://www.encodeproject.org/files/ENCFF047ANU/@@download/ENCFF047ANU.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF461IPU bigWig fold change over control ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF357WAY, ENCFF911WGI, ENCFF943DZB 820269807 ENCODE Processing Pipeline 0e1fae8449794b5b176edd1dcdf21aae https://www.encodeproject.org/files/ENCFF461IPU/@@download/ENCFF461IPU.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF480GLV bed narrowPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF357WAY, ENCFF911WGI, ENCFF943DZB 5243756 ENCODE Processing Pipeline c8c7d7171a3b420bcd86ec4b8bbde40c https://www.encodeproject.org/files/ENCFF480GLV/@@download/ENCFF480GLV.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF198OWC bed narrowPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF357WAY, ENCFF943DZB 4377812 ENCODE Processing Pipeline e69f9f02419db26cd607247066d260ab https://www.encodeproject.org/files/ENCFF198OWC/@@download/ENCFF198OWC.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF743QEP bigBed narrowPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF012VKK 10876043 ENCODE Processing Pipeline b460fa1feed2b9494d5e786fa0ead8c2 https://www.encodeproject.org/files/ENCFF743QEP/@@download/ENCFF743QEP.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF279ZSC bigBed narrowPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF480GLV 11509354 ENCODE Processing Pipeline b7c3f93247048853eb5520758d028555 https://www.encodeproject.org/files/ENCFF279ZSC/@@download/ENCFF279ZSC.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF012VKK bed narrowPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF911WGI, ENCFF943DZB 4528201 ENCODE Processing Pipeline e74560a2d7adccea28af9ae13ce57407 https://www.encodeproject.org/files/ENCFF012VKK/@@download/ENCFF012VKK.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF326VNY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF416CBR 162377 ENCODE Processing Pipeline 9f45846852511d69e773fab02800368d https://www.encodeproject.org/files/ENCFF326VNY/@@download/ENCFF326VNY.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF137OEY bed narrowPeak optimal idr thresholded peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF012VKK, ENCFF198OWC, ENCFF419RSJ, ENCFF480GLV 72742 ENCODE Processing Pipeline 20f5ad2e9a530a364078ef77d3b742ac https://www.encodeproject.org/files/ENCFF137OEY/@@download/ENCFF137OEY.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF753WNT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF137OEY 184629 ENCODE Processing Pipeline 454c736808105bc88113c118fe55f427 https://www.encodeproject.org/files/ENCFF753WNT/@@download/ENCFF753WNT.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF416CBR bed narrowPeak conservative idr thresholded peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF012VKK, ENCFF198OWC, ENCFF419RSJ, ENCFF480GLV 56959 ENCODE Processing Pipeline af2d6c6094e25c79cff48771630f8d85 https://www.encodeproject.org/files/ENCFF416CBR/@@download/ENCFF416CBR.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF764YXF bigBed narrowPeak peaks ENCSR000BKE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF198OWC 10835386 ENCODE Processing Pipeline e9490a016cd7406d55b65d4afb6d01e6 https://www.encodeproject.org/files/ENCFF764YXF/@@download/ENCFF764YXF.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000ORC bam alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000ORR 1916537389 Richard Myers, HAIB fd5965695414d0d3237c5c2e3244ffd0 https://www.encodeproject.org/files/ENCFF000ORC/@@download/ENCFF000ORC.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000ORD bam alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000ORP 2152328616 Richard Myers, HAIB 63845f198f2942087d684d5894795168 https://www.encodeproject.org/files/ENCFF000ORD/@@download/ENCFF000ORD.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000ORE bigBed broadPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBY 854795 Richard Myers, HAIB bd084e5f3368675e730ca0804808651f https://www.encodeproject.org/files/ENCFF000ORE/@@download/ENCFF000ORE.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000ORF bigBed broadPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBZ 1226216 Richard Myers, HAIB f4196985e1e4a815ecec12b396be4f54 https://www.encodeproject.org/files/ENCFF000ORF/@@download/ENCFF000ORF.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000ORH bigWig raw signal ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 63823735 Richard Myers, HAIB dcd36c05dd222e3fed9e0803ef1c2111 https://www.encodeproject.org/files/ENCFF000ORH/@@download/ENCFF000ORH.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000ORI bigWig raw signal ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 47340327 Richard Myers, HAIB 047fd95891cc9353cdee506969fb5aa1 https://www.encodeproject.org/files/ENCFF000ORI/@@download/ENCFF000ORI.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000ORP fastq reads ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1749306889 Richard Myers, HAIB 59ec1c39e3eeaa5b20e822adc651b152 https://www.encodeproject.org/files/ENCFF000ORP/@@download/ENCFF000ORP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000ORR fastq reads ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1479796204 Richard Myers, HAIB 6ed051a48a9b9e75fa07f5f9339663a8 https://www.encodeproject.org/files/ENCFF000ORR/@@download/ENCFF000ORR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UBY bed broadPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 533909 Richard Myers, HAIB 207a27b3ac8c2efd9657c84c9b0f05a8 https://www.encodeproject.org/files/ENCFF001UBY/@@download/ENCFF001UBY.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UBZ bed broadPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 660137 Richard Myers, HAIB a36dedbf942458f5b481cb7a38619b9a https://www.encodeproject.org/files/ENCFF001UBZ/@@download/ENCFF001UBZ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CJE bed narrowPeak optimal idr thresholded peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 506280 ENCODE Consortium Analysis Working Group 4e11e8ea1d8d30a05af469d92507d4e8 https://www.encodeproject.org/files/ENCFF002CJE/@@download/ENCFF002CJE.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF636HGU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CJE 1349233 ENCODE Consortium d2bc0516a43b09f436fd7109096c69c4 https://www.encodeproject.org/files/ENCFF636HGU/@@download/ENCFF636HGU.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF924LLX bam unfiltered alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ORP, ENCFF643CGH 2106502269 ENCODE Processing Pipeline 81dd71ab9021a39a4cc1fb1502899147 https://www.encodeproject.org/files/ENCFF924LLX/@@download/ENCFF924LLX.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF574FQP bam alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ORP, ENCFF643CGH 979496724 ENCODE Processing Pipeline 5a390e910fde404fecba8cb7ffb19b20 https://www.encodeproject.org/files/ENCFF574FQP/@@download/ENCFF574FQP.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF387HHV bam unfiltered alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORR, ENCFF643CGH 1924091683 ENCODE Processing Pipeline 259b5b43f40fc57f60833fde379ed8e9 https://www.encodeproject.org/files/ENCFF387HHV/@@download/ENCFF387HHV.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF524CBX bam alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORR, ENCFF643CGH 1128355702 ENCODE Processing Pipeline 52077107005bebec5e4040ac3711cb0c https://www.encodeproject.org/files/ENCFF524CBX/@@download/ENCFF524CBX.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF904NZW bam unfiltered alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORR, ENCFF807MUK 1919101741 ENCODE Processing Pipeline 3c233360fa483d80264f24c42b72c611 https://www.encodeproject.org/files/ENCFF904NZW/@@download/ENCFF904NZW.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF972DXD bam alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORR, ENCFF807MUK 1129085747 ENCODE Processing Pipeline 6260d72268b4673b315fe651c0e62391 https://www.encodeproject.org/files/ENCFF972DXD/@@download/ENCFF972DXD.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF753GCI bam unfiltered alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ORP, ENCFF807MUK 2103158423 ENCODE Processing Pipeline bb4ad5d2f3eb99c72957d1633f11a729 https://www.encodeproject.org/files/ENCFF753GCI/@@download/ENCFF753GCI.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF526YGE bam alignments ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ORP, ENCFF807MUK 980378700 ENCODE Processing Pipeline feec554a346d2d531e21937e929e0eb6 https://www.encodeproject.org/files/ENCFF526YGE/@@download/ENCFF526YGE.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF530TMN bigWig signal p-value ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF574FQP 529822798 ENCODE Processing Pipeline 144ef0ee2b3cfd259bcb588fa58250e4 https://www.encodeproject.org/files/ENCFF530TMN/@@download/ENCFF530TMN.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF003WJF bigWig signal p-value ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF524CBX 526176878 ENCODE Processing Pipeline 9a3613a39f0bd16476872cc6cebe63b2 https://www.encodeproject.org/files/ENCFF003WJF/@@download/ENCFF003WJF.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF752OKK bigWig signal p-value ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF524CBX, ENCFF574FQP 532648188 ENCODE Processing Pipeline e9d6889adaf2403deab9812fc4141fe1 https://www.encodeproject.org/files/ENCFF752OKK/@@download/ENCFF752OKK.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF376XTC bigWig fold change over control ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF574FQP 399351264 ENCODE Processing Pipeline 439fc3246bd816a3945764aa23b2db11 https://www.encodeproject.org/files/ENCFF376XTC/@@download/ENCFF376XTC.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF795YDZ bigWig fold change over control ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF524CBX 442194315 ENCODE Processing Pipeline ccc0ff90a4ad1a64f763ff85a1887676 https://www.encodeproject.org/files/ENCFF795YDZ/@@download/ENCFF795YDZ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF460HGL bed narrowPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF574FQP 6730894 ENCODE Processing Pipeline 04c3f4725fc381eab31bc688dd78b1a5 https://www.encodeproject.org/files/ENCFF460HGL/@@download/ENCFF460HGL.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF379IRQ bigWig fold change over control ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF524CBX, ENCFF574FQP 694356003 ENCODE Processing Pipeline 9632c70010ce39a0fe5470959c8214f8 https://www.encodeproject.org/files/ENCFF379IRQ/@@download/ENCFF379IRQ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF872ETJ bed narrowPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF524CBX, ENCFF574FQP 7095456 ENCODE Processing Pipeline 6dfaab1b2661591cff9a5d24424914d3 https://www.encodeproject.org/files/ENCFF872ETJ/@@download/ENCFF872ETJ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF075AAT bed narrowPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF524CBX 6845961 ENCODE Processing Pipeline baffbf4f257a824d25318b3cdafa544c https://www.encodeproject.org/files/ENCFF075AAT/@@download/ENCFF075AAT.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF874UWE bigBed narrowPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF460HGL 11766023 ENCODE Processing Pipeline 8ea17b67d1b8c370704cc46b405a5c32 https://www.encodeproject.org/files/ENCFF874UWE/@@download/ENCFF874UWE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF374UIH bed narrowPeak conservative idr thresholded peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF075AAT, ENCFF419RSJ, ENCFF460HGL, ENCFF872ETJ 594120 ENCODE Processing Pipeline 16f7796f11aa24cfd324864779622430 https://www.encodeproject.org/files/ENCFF374UIH/@@download/ENCFF374UIH.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF500HYP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF374UIH 1273946 ENCODE Processing Pipeline 7268eac82257f5bc1a1fc31697022953 https://www.encodeproject.org/files/ENCFF500HYP/@@download/ENCFF500HYP.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF422HDN bed narrowPeak optimal idr thresholded peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF075AAT, ENCFF419RSJ, ENCFF460HGL, ENCFF872ETJ 668440 ENCODE Processing Pipeline 81e25b8c10a5241e0d03b2c2ffe0fde1 https://www.encodeproject.org/files/ENCFF422HDN/@@download/ENCFF422HDN.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF516UYE bigBed narrowPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF872ETJ 12113472 ENCODE Processing Pipeline f576ed6a467f627f14cf9dea20941d70 https://www.encodeproject.org/files/ENCFF516UYE/@@download/ENCFF516UYE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF737COK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF422HDN 1407891 ENCODE Processing Pipeline 9128e8c499439fd3850004694da139fd https://www.encodeproject.org/files/ENCFF737COK/@@download/ENCFF737COK.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF373SUB bigBed narrowPeak peaks ENCSR000BHN ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF075AAT 12680220 ENCODE Processing Pipeline 63d8903483a0c02b1cfab0694911f0b3 https://www.encodeproject.org/files/ENCFF373SUB/@@download/ENCFF373SUB.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OJD bam alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OJM 1121252639 Richard Myers, HAIB 9a9d8570ccc788332934b963d18156c3 https://www.encodeproject.org/files/ENCFF000OJD/@@download/ENCFF000OJD.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJE bam alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OJL 838927569 Richard Myers, HAIB 504adbe6efb8a8b57f0bd1e7090934dc https://www.encodeproject.org/files/ENCFF000OJE/@@download/ENCFF000OJE.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJF bigBed broadPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAC 1376529 Richard Myers, HAIB e3da0a49e8032b2a7812928c1bd08cfc https://www.encodeproject.org/files/ENCFF000OJF/@@download/ENCFF000OJF.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJG bigBed broadPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAD 877239 Richard Myers, HAIB d80492233368fb6fcba97552d1ea2fa7 https://www.encodeproject.org/files/ENCFF000OJG/@@download/ENCFF000OJG.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJI bigWig raw signal ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 1 55102160 Richard Myers, HAIB 2fdf5ac8961b13a516337c7e57ef8a7b https://www.encodeproject.org/files/ENCFF000OJI/@@download/ENCFF000OJI.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OJJ bigWig raw signal ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 1 36980137 Richard Myers, HAIB 4c3dcc23f470f95b1703dd007242db84 https://www.encodeproject.org/files/ENCFF000OJJ/@@download/ENCFF000OJJ.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OJL fastq reads ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 881848482 Richard Myers, HAIB 35d6f5b67efd8d533b65abe5cb9c99e7 https://www.encodeproject.org/files/ENCFF000OJL/@@download/ENCFF000OJL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJM fastq reads ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1390258232 Richard Myers, HAIB ffd6e27e2c0b3361cf0d2f88b52b41b7 https://www.encodeproject.org/files/ENCFF000OJM/@@download/ENCFF000OJM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001UAC bed broadPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 1 915698 Richard Myers, HAIB 84d3fbb0c637dd7172a73c5bf9a8daa3 https://www.encodeproject.org/files/ENCFF001UAC/@@download/ENCFF001UAC.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UAD bed broadPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 1 517713 Richard Myers, HAIB bcf4e0246e35bef06ade8421f114a824 https://www.encodeproject.org/files/ENCFF001UAD/@@download/ENCFF001UAD.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CIJ bed narrowPeak optimal idr thresholded peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1209797 ENCODE Consortium Analysis Working Group 08161bbdfa7636291c380aafb6743949 https://www.encodeproject.org/files/ENCFF002CIJ/@@download/ENCFF002CIJ.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF544YOJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE ENCFF002CIJ 2734329 ENCODE Consortium dec6ee2452a45b439b59201ccb0ecd62 https://www.encodeproject.org/files/ENCFF544YOJ/@@download/ENCFF544YOJ.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF300OET bam unfiltered alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OJL, ENCFF643CGH 1101612416 ENCODE Processing Pipeline cc20d750ab6b2d61cb6feea68590af64 https://www.encodeproject.org/files/ENCFF300OET/@@download/ENCFF300OET.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF482TVZ bam alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OJL, ENCFF643CGH 641977911 ENCODE Processing Pipeline 41073248ede011e50a10450553f919c0 https://www.encodeproject.org/files/ENCFF482TVZ/@@download/ENCFF482TVZ.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF688SGS bam unfiltered alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OJM, ENCFF643CGH 1690044362 ENCODE Processing Pipeline 61d07dfa0a9eeb1feefbff2f93577cd7 https://www.encodeproject.org/files/ENCFF688SGS/@@download/ENCFF688SGS.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF724WMD bam alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OJM, ENCFF643CGH 799811309 ENCODE Processing Pipeline 219032d220792e632da5ce0438665587 https://www.encodeproject.org/files/ENCFF724WMD/@@download/ENCFF724WMD.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF152ZGE bam alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OJL, ENCFF807MUK 639718867 ENCODE Processing Pipeline 473c6f6d489b0d8ea4fcd0f2519ed30c https://www.encodeproject.org/files/ENCFF152ZGE/@@download/ENCFF152ZGE.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF029ZXM bam unfiltered alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OJL, ENCFF807MUK 1098555163 ENCODE Processing Pipeline ff5bd3859865f8740fd01a9d4959eb7e https://www.encodeproject.org/files/ENCFF029ZXM/@@download/ENCFF029ZXM.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF886WVK bam unfiltered alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OJM, ENCFF807MUK 1687106417 ENCODE Processing Pipeline c8995b07bf1b595612d4a278c66e6ddb https://www.encodeproject.org/files/ENCFF886WVK/@@download/ENCFF886WVK.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF450BQJ bam alignments ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OJM, ENCFF807MUK 792519970 ENCODE Processing Pipeline 517e2df4d90a1d19081ea1409724d33e https://www.encodeproject.org/files/ENCFF450BQJ/@@download/ENCFF450BQJ.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF160FDK bigWig signal p-value ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF724WMD, ENCFF857FLV 341653763 ENCODE Processing Pipeline 70142caffa968d51fc1eaedd1863f5f2 https://www.encodeproject.org/files/ENCFF160FDK/@@download/ENCFF160FDK.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF067OSZ bigWig signal p-value ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF482TVZ, ENCFF857FLV 304474207 ENCODE Processing Pipeline a48c9e5beb169677cf76698bbfe9fbc5 https://www.encodeproject.org/files/ENCFF067OSZ/@@download/ENCFF067OSZ.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF274RJE bigWig signal p-value ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF482TVZ, ENCFF724WMD, ENCFF857FLV 328354146 ENCODE Processing Pipeline 8dbfcce073df403b5763ccd33d808f0f https://www.encodeproject.org/files/ENCFF274RJE/@@download/ENCFF274RJE.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF823KBV bigWig fold change over control ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF724WMD, ENCFF857FLV 290615373 ENCODE Processing Pipeline 026b1b479c183b1123a5ce896f035b3d https://www.encodeproject.org/files/ENCFF823KBV/@@download/ENCFF823KBV.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF831DBJ bigWig fold change over control ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF482TVZ, ENCFF857FLV 253808352 ENCODE Processing Pipeline 4efba06194e8deb9ccb561ab76d7613d https://www.encodeproject.org/files/ENCFF831DBJ/@@download/ENCFF831DBJ.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF697BIB bigBed narrowPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285RDX 10958759 ENCODE Processing Pipeline 0404ce845a16b055b1024fa95ff48c32 https://www.encodeproject.org/files/ENCFF697BIB/@@download/ENCFF697BIB.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF998DST bigWig fold change over control ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF482TVZ, ENCFF724WMD, ENCFF857FLV 456944138 ENCODE Processing Pipeline 10ef9cfe72e15b304c4e5965f0cc7841 https://www.encodeproject.org/files/ENCFF998DST/@@download/ENCFF998DST.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF285RDX bed narrowPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF724WMD, ENCFF857FLV 4761260 ENCODE Processing Pipeline d83cb80dd172c68e9d8dfde5347f0a55 https://www.encodeproject.org/files/ENCFF285RDX/@@download/ENCFF285RDX.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF578KPT bigBed narrowPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041SZY 11619523 ENCODE Processing Pipeline 29bd947b8ca33ab55aabd6103c505348 https://www.encodeproject.org/files/ENCFF578KPT/@@download/ENCFF578KPT.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF164YAR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF833PVL 1468500 ENCODE Processing Pipeline 6a93f081acf19c718b8676360f106d38 https://www.encodeproject.org/files/ENCFF164YAR/@@download/ENCFF164YAR.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF041SZY bed narrowPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF482TVZ, ENCFF724WMD, ENCFF857FLV 5468699 ENCODE Processing Pipeline c8a745a9dd89deddbd99e097dc55aeae https://www.encodeproject.org/files/ENCFF041SZY/@@download/ENCFF041SZY.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF551GQH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF744AGB 1532460 ENCODE Processing Pipeline f921a341bdc3efddb1a36ce56c0d2c83 https://www.encodeproject.org/files/ENCFF551GQH/@@download/ENCFF551GQH.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF653SSF bed narrowPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF482TVZ, ENCFF857FLV 4615896 ENCODE Processing Pipeline e4ab3116741aa81605cadd8f8995ddb9 https://www.encodeproject.org/files/ENCFF653SSF/@@download/ENCFF653SSF.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF958SEN bigBed narrowPeak peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF653SSF 10722042 ENCODE Processing Pipeline 923e263a29c651cd4a7438bb12b36469 https://www.encodeproject.org/files/ENCFF958SEN/@@download/ENCFF958SEN.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF833PVL bed narrowPeak conservative idr thresholded peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041SZY, ENCFF285RDX, ENCFF419RSJ, ENCFF653SSF 876206 ENCODE Processing Pipeline 0ddc8e3c6f5d078f764b5e6a36d9501d https://www.encodeproject.org/files/ENCFF833PVL/@@download/ENCFF833PVL.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF744AGB bed narrowPeak optimal idr thresholded peaks ENCSR000BIJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041SZY, ENCFF285RDX, ENCFF419RSJ, ENCFF653SSF 924057 ENCODE Processing Pipeline 8bb508bd4bb040c539b1c331dd860997 https://www.encodeproject.org/files/ENCFF744AGB/@@download/ENCFF744AGB.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OVG bam alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OVN 475403721 Richard Myers, HAIB c70643e61d30978e69e9b1195ba3b656 https://www.encodeproject.org/files/ENCFF000OVG/@@download/ENCFF000OVG.bam hg19 archived low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000OVH bam alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OVP 666182759 Richard Myers, HAIB 9b9baadb59e6b0b0962589f9459ca582 https://www.encodeproject.org/files/ENCFF000OVH/@@download/ENCFF000OVH.bam hg19 archived low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000OVJ bigBed broadPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCW 333495 Richard Myers, HAIB 3f0c31133fd3147e0566a267d56d2429 https://www.encodeproject.org/files/ENCFF000OVJ/@@download/ENCFF000OVJ.bigBed hg19 archived low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000OVK bigBed broadPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCX 552772 Richard Myers, HAIB 5705ae45381210ac3f905566b1f49a75 https://www.encodeproject.org/files/ENCFF000OVK/@@download/ENCFF000OVK.bigBed hg19 archived low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000OVL bigWig raw signal ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 3170082 Richard Myers, HAIB cba88f1ca34b4aba24c30e1bb36e01f1 https://www.encodeproject.org/files/ENCFF000OVL/@@download/ENCFF000OVL.bigWig hg19 archived low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OVM bigWig raw signal ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 7582512 Richard Myers, HAIB 1996f0d947cb96da85593c12e19ddf02 https://www.encodeproject.org/files/ENCFF000OVM/@@download/ENCFF000OVM.bigWig hg19 archived low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OVN fastq reads ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 608296493 Richard Myers, HAIB bcfe8571277c6d9a7b1f9947aaf41ef4 https://www.encodeproject.org/files/ENCFF000OVN/@@download/ENCFF000OVN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000OVP fastq reads ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 621658763 Richard Myers, HAIB 02e4d8c06298bdf70690275cc168b8a8 https://www.encodeproject.org/files/ENCFF000OVP/@@download/ENCFF000OVP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF001UCW bed broadPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 197125 Richard Myers, HAIB 876ca0b9a5bd75fdab44c8f83d45b03f https://www.encodeproject.org/files/ENCFF001UCW/@@download/ENCFF001UCW.bed.gz hg19 archived low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UCX bed broadPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 373179 Richard Myers, HAIB 8c9872933110be37080b49f879f1fcba https://www.encodeproject.org/files/ENCFF001UCX/@@download/ENCFF001UCX.bed.gz hg19 archived low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CJQ bed narrowPeak optimal idr thresholded peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 151751 ENCODE Consortium Analysis Working Group b2ae3c4f14cd0925547fce472ce96e1b https://www.encodeproject.org/files/ENCFF002CJQ/@@download/ENCFF002CJQ.bed.gz hg19 archived low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF806KWU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE ENCFF002CJQ 296192 ENCODE Consortium 05e6499e0e4faab2999825a9450ffb89 https://www.encodeproject.org/files/ENCFF806KWU/@@download/ENCFF806KWU.bigBed hg19 archived low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF244WMU bam unfiltered alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVP, ENCFF643CGH 819757804 ENCODE Processing Pipeline 523bc4f7250561887b9edd66cacaa787 https://www.encodeproject.org/files/ENCFF244WMU/@@download/ENCFF244WMU.bam GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF269TPC bam alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVP, ENCFF643CGH 510657644 ENCODE Processing Pipeline a665a2fd8bf83ac05d7fecbb2070bc25 https://www.encodeproject.org/files/ENCFF269TPC/@@download/ENCFF269TPC.bam GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF851QUM bam unfiltered alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVN, ENCFF643CGH 785498724 ENCODE Processing Pipeline ca28aceaf617d981467885e0834cea7f https://www.encodeproject.org/files/ENCFF851QUM/@@download/ENCFF851QUM.bam GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF421BPV bam alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVN, ENCFF643CGH 401881181 ENCODE Processing Pipeline de3b1d9ccb79c9d84271772eeb5d3b30 https://www.encodeproject.org/files/ENCFF421BPV/@@download/ENCFF421BPV.bam GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF944UGX bam alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVP, ENCFF807MUK 511011181 ENCODE Processing Pipeline 6c73028c19d1c442089fdc207f3a1b8b https://www.encodeproject.org/files/ENCFF944UGX/@@download/ENCFF944UGX.bam hg19 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF283GJG bam unfiltered alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVP, ENCFF807MUK 817426704 ENCODE Processing Pipeline 35e8771b25c1490c740863f0ae158e32 https://www.encodeproject.org/files/ENCFF283GJG/@@download/ENCFF283GJG.bam hg19 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF513ODJ bam unfiltered alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVN, ENCFF807MUK 783098398 ENCODE Processing Pipeline e224351b5b6ecf8469a0661bd9101a9a https://www.encodeproject.org/files/ENCFF513ODJ/@@download/ENCFF513ODJ.bam hg19 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF381JSU bam alignments ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVN, ENCFF807MUK 402231416 ENCODE Processing Pipeline 0ad71624e619712962e90161d47b7b97 https://www.encodeproject.org/files/ENCFF381JSU/@@download/ENCFF381JSU.bam hg19 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF894KCB bigWig signal p-value ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF269TPC 336183387 ENCODE Processing Pipeline 2116a8074a4670032dddf7ad8e25a854 https://www.encodeproject.org/files/ENCFF894KCB/@@download/ENCFF894KCB.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF143RCD bigWig fold change over control ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF421BPV 213606208 ENCODE Processing Pipeline a333f71b0f10ad3f53a5abd002a8dea7 https://www.encodeproject.org/files/ENCFF143RCD/@@download/ENCFF143RCD.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF716ZUV bed narrowPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF269TPC, ENCFF421BPV 4958868 ENCODE Processing Pipeline d2a6bee212397c787185eaaca6fdd0d2 https://www.encodeproject.org/files/ENCFF716ZUV/@@download/ENCFF716ZUV.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF437BRM bigWig signal p-value ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF421BPV 439744160 ENCODE Processing Pipeline 6cc2a02925debb337ffe7e80e3ca8257 https://www.encodeproject.org/files/ENCFF437BRM/@@download/ENCFF437BRM.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF459RRL bed narrowPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF421BPV 4168437 ENCODE Processing Pipeline a02f1e630c483f34de954c37a17cef33 https://www.encodeproject.org/files/ENCFF459RRL/@@download/ENCFF459RRL.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF105JYR bigBed narrowPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF700SBL 10327335 ENCODE Processing Pipeline 4974cbbad13b081e38e687a5115a4bdf https://www.encodeproject.org/files/ENCFF105JYR/@@download/ENCFF105JYR.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF763DIS bigBed narrowPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF459RRL 10199492 ENCODE Processing Pipeline 75401ca027b7353c150666fa30e4c6c0 https://www.encodeproject.org/files/ENCFF763DIS/@@download/ENCFF763DIS.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF264OCQ bed narrowPeak conservative idr thresholded peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF459RRL, ENCFF700SBL, ENCFF716ZUV 150113 ENCODE Processing Pipeline 3bf12e1a9b42fbeb9d1e5c7309bf75ac https://www.encodeproject.org/files/ENCFF264OCQ/@@download/ENCFF264OCQ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF978PZL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF264OCQ 287432 ENCODE Processing Pipeline 1131db0e57b8540940a210936ccb0308 https://www.encodeproject.org/files/ENCFF978PZL/@@download/ENCFF978PZL.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF548GTM bigWig fold change over control ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF269TPC 244044939 ENCODE Processing Pipeline 8b760c3b7ca905724b5ff10ec53652ea https://www.encodeproject.org/files/ENCFF548GTM/@@download/ENCFF548GTM.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF715MYQ bigWig fold change over control ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF269TPC, ENCFF421BPV 414981282 ENCODE Processing Pipeline 53adca815fc7bf2804909e1227297afd https://www.encodeproject.org/files/ENCFF715MYQ/@@download/ENCFF715MYQ.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF700SBL bed narrowPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF269TPC 4237398 ENCODE Processing Pipeline 22cdda36f4bf8764d01e681cde6fb47e https://www.encodeproject.org/files/ENCFF700SBL/@@download/ENCFF700SBL.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF740HPV bed narrowPeak optimal idr thresholded peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF459RRL, ENCFF700SBL, ENCFF716ZUV 201307 ENCODE Processing Pipeline c24e29c6e2b2b45cbf81d057dd2e7e56 https://www.encodeproject.org/files/ENCFF740HPV/@@download/ENCFF740HPV.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF277KGF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF740HPV 352427 ENCODE Processing Pipeline 486e1fad84f49b0a1556e1dc47f44e54 https://www.encodeproject.org/files/ENCFF277KGF/@@download/ENCFF277KGF.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF594EPA bigWig signal p-value ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF269TPC, ENCFF421BPV 584229153 ENCODE Processing Pipeline ce90ee8fb343fd72a933343d40e6991b https://www.encodeproject.org/files/ENCFF594EPA/@@download/ENCFF594EPA.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF656TKK bigBed narrowPeak peaks ENCSR000BIT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF716ZUV 10990548 ENCODE Processing Pipeline fd5129bc5c9512fe83309bb70af6b18d https://www.encodeproject.org/files/ENCFF656TKK/@@download/ENCFF656TKK.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF002BFO fastq reads ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1613808460 Richard Myers, HAIB 52bbe02cf59ba37f4d97ec59ec6d58bf SRA:SRR5331577 https://www.encodeproject.org/files/ENCFF002BFO/@@download/ENCFF002BFO.fastq.gz HiSeq 2000 /files/ENCFF001RVP/ released missing unfiltered alignments ENCFF002BFP fastq reads ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1629342273 Richard Myers, HAIB 76074bb4e8e631a86aa320611017543d SRA:SRR5331578 https://www.encodeproject.org/files/ENCFF002BFP/@@download/ENCFF002BFP.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released missing unfiltered alignments ENCFF016MFU bam alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFO, ENCFF807MUK 1268017381 ENCODE Processing Pipeline 660cb5eac8d2c75e65d927c458ba0ab6 https://www.encodeproject.org/files/ENCFF016MFU/@@download/ENCFF016MFU.bam hg19 released missing unfiltered alignments ENCFF986OUP bam alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFP, ENCFF807MUK 1305616018 ENCODE Processing Pipeline 92955810e04dad791b7c0fb7631648e3 https://www.encodeproject.org/files/ENCFF986OUP/@@download/ENCFF986OUP.bam hg19 released missing unfiltered alignments ENCFF836CBV bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF016MFU, ENCFF048VYQ, ENCFF839YOM 1040416198 ENCODE Processing Pipeline fb4bcafa73e4ec67965091504d90e316 https://www.encodeproject.org/files/ENCFF836CBV/@@download/ENCFF836CBV.bigWig hg19 released missing unfiltered alignments, mismatched status ENCFF337AEQ bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF048VYQ, ENCFF839YOM, ENCFF986OUP 1091621409 ENCODE Processing Pipeline 3070b68f930a46d5e702bb7d9b67d376 https://www.encodeproject.org/files/ENCFF337AEQ/@@download/ENCFF337AEQ.bigWig hg19 released missing unfiltered alignments, mismatched status ENCFF886QJG bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016MFU, ENCFF048VYQ, ENCFF839YOM, ENCFF986OUP 1288350732 ENCODE Processing Pipeline 72575c12964119f0d1282de50b294d9f https://www.encodeproject.org/files/ENCFF886QJG/@@download/ENCFF886QJG.bigWig hg19 released missing unfiltered alignments, mismatched status ENCFF387DEW bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF016MFU, ENCFF048VYQ, ENCFF839YOM 769867199 ENCODE Processing Pipeline 5cdc7e3563bcac5eb505b741c79d3139 https://www.encodeproject.org/files/ENCFF387DEW/@@download/ENCFF387DEW.bigWig hg19 released missing unfiltered alignments, mismatched status ENCFF246VRU bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF048VYQ, ENCFF839YOM, ENCFF986OUP 739457335 ENCODE Processing Pipeline 728c1c05d01d8e53981473cf52a02f3c https://www.encodeproject.org/files/ENCFF246VRU/@@download/ENCFF246VRU.bigWig hg19 released missing unfiltered alignments, mismatched status ENCFF557XQA bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016MFU, ENCFF048VYQ, ENCFF839YOM, ENCFF986OUP 1247858304 ENCODE Processing Pipeline 38100e839ef2ad144d7eeaa7c56abfbc https://www.encodeproject.org/files/ENCFF557XQA/@@download/ENCFF557XQA.bigWig hg19 released missing unfiltered alignments, mismatched status ENCFF229LJO bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF048VYQ, ENCFF839YOM, ENCFF986OUP 6629582 ENCODE Processing Pipeline 6ea7174083212bf7161b70ea35301d5c https://www.encodeproject.org/files/ENCFF229LJO/@@download/ENCFF229LJO.bed.gz hg19 released missing unfiltered alignments, mismatched status ENCFF524QUC bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016MFU, ENCFF048VYQ, ENCFF839YOM, ENCFF986OUP 7101184 ENCODE Processing Pipeline 45256f7957987020bbac427794291943 https://www.encodeproject.org/files/ENCFF524QUC/@@download/ENCFF524QUC.bed.gz hg19 released missing unfiltered alignments, mismatched status ENCFF486BQP bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF323QXY 13385869 ENCODE Processing Pipeline a04de3134a4437bd81f727b16163a4f7 https://www.encodeproject.org/files/ENCFF486BQP/@@download/ENCFF486BQP.bigBed hg19 released missing unfiltered alignments ENCFF323QXY bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF016MFU, ENCFF048VYQ, ENCFF839YOM 6574848 ENCODE Processing Pipeline 80bc61446b1885b084dd86fe805013a8 https://www.encodeproject.org/files/ENCFF323QXY/@@download/ENCFF323QXY.bed.gz hg19 released missing unfiltered alignments, mismatched status ENCFF194GYD bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF229LJO 13255569 ENCODE Processing Pipeline ac820a23c2cadc965320fe53a6cd98b6 https://www.encodeproject.org/files/ENCFF194GYD/@@download/ENCFF194GYD.bigBed hg19 released missing unfiltered alignments ENCFF191NPD bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF524QUC 13198212 ENCODE Processing Pipeline 9ed551b745b7fda152f1426c9a10958b https://www.encodeproject.org/files/ENCFF191NPD/@@download/ENCFF191NPD.bigBed hg19 released missing unfiltered alignments ENCFF061DUL bam unfiltered alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFO, ENCFF643CGH 1726607237 ENCODE Processing Pipeline 39f59ac46bed67b46af25e848b3a76c9 https://www.encodeproject.org/files/ENCFF061DUL/@@download/ENCFF061DUL.bam GRCh38 released missing unfiltered alignments ENCFF061RFH bam unfiltered alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFP, ENCFF643CGH 1751658712 ENCODE Processing Pipeline 1035f4c32400b508cd611623af65beba https://www.encodeproject.org/files/ENCFF061RFH/@@download/ENCFF061RFH.bam GRCh38 released missing unfiltered alignments ENCFF261BXO bam alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFP, ENCFF643CGH 1305095200 ENCODE Processing Pipeline 38f96996071f609605ab06b63c7a2a0f https://www.encodeproject.org/files/ENCFF261BXO/@@download/ENCFF261BXO.bam GRCh38 released missing unfiltered alignments ENCFF035GBL bam alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFO, ENCFF643CGH 1267455228 ENCODE Processing Pipeline d20b8c035213987c7e77d9322e2f5b7a https://www.encodeproject.org/files/ENCFF035GBL/@@download/ENCFF035GBL.bam GRCh38 released missing unfiltered alignments ENCFF377BCO bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF035GBL, ENCFF121DUE, ENCFF709XAA 1048400099 ENCODE Processing Pipeline efcefbe47563f8212dac4f358426f0b7 https://www.encodeproject.org/files/ENCFF377BCO/@@download/ENCFF377BCO.bigWig GRCh38 released missing unfiltered alignments ENCFF669JAP bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 1106697203 ENCODE Processing Pipeline 6bf07c236f29d6eb7a23f270800fada1 https://www.encodeproject.org/files/ENCFF669JAP/@@download/ENCFF669JAP.bigWig GRCh38 released missing unfiltered alignments ENCFF465PNK bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF035GBL, ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 1305950391 ENCODE Processing Pipeline 8457ed47cc1e865b028b1bc33b7c0f1c https://www.encodeproject.org/files/ENCFF465PNK/@@download/ENCFF465PNK.bigWig GRCh38 released missing unfiltered alignments ENCFF128OSD bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF035GBL, ENCFF121DUE, ENCFF709XAA 784667665 ENCODE Processing Pipeline 63ad885b429bbea56fe522ddf1331a89 https://www.encodeproject.org/files/ENCFF128OSD/@@download/ENCFF128OSD.bigWig GRCh38 released missing unfiltered alignments ENCFF010XWS bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 825643500 ENCODE Processing Pipeline 9b160de48409c7da4e221bf1ef260004 https://www.encodeproject.org/files/ENCFF010XWS/@@download/ENCFF010XWS.bigWig GRCh38 released missing unfiltered alignments ENCFF891OWF bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF035GBL, ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 1220605707 ENCODE Processing Pipeline b2fff7fbcaaf4beaafb4fdbe8c3c54fa https://www.encodeproject.org/files/ENCFF891OWF/@@download/ENCFF891OWF.bigWig GRCh38 released missing unfiltered alignments ENCFF371IMA bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF035GBL, ENCFF121DUE, ENCFF709XAA 6372209 ENCODE Processing Pipeline 9731b9cdb0623a4de180b26b61ca4dc5 https://www.encodeproject.org/files/ENCFF371IMA/@@download/ENCFF371IMA.bed.gz GRCh38 released missing unfiltered alignments ENCFF938QIC bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF035GBL, ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 6955462 ENCODE Processing Pipeline 34ff6da1005d65084f0a0455fe945330 https://www.encodeproject.org/files/ENCFF938QIC/@@download/ENCFF938QIC.bed.gz GRCh38 released missing unfiltered alignments ENCFF135BUM bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF086AMQ 13271949 ENCODE Processing Pipeline 19e5f8d20c7aa5ed8b08f936170f4fb1 https://www.encodeproject.org/files/ENCFF135BUM/@@download/ENCFF135BUM.bigBed GRCh38 released missing unfiltered alignments ENCFF086AMQ bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 6468341 ENCODE Processing Pipeline 1d51a115dc7d2efa52004b7ef1f29901 https://www.encodeproject.org/files/ENCFF086AMQ/@@download/ENCFF086AMQ.bed.gz GRCh38 released missing unfiltered alignments ENCFF619KWZ bed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086AMQ, ENCFF371IMA, ENCFF419RSJ, ENCFF938QIC 93920 ENCODE Processing Pipeline 80c2419a8c439902fab5ff013c93e6c8 https://www.encodeproject.org/files/ENCFF619KWZ/@@download/ENCFF619KWZ.bed.gz GRCh38 released missing unfiltered alignments ENCFF634VKB bigBed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF619KWZ 229536 ENCODE Processing Pipeline aaa33d4267c4d46a3b5e1d6955bad0c6 https://www.encodeproject.org/files/ENCFF634VKB/@@download/ENCFF634VKB.bigBed GRCh38 released missing unfiltered alignments ENCFF500KOA bigBed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF388TYU 250265 ENCODE Processing Pipeline d9d226da9d2b8a15c0d08f46274b7646 https://www.encodeproject.org/files/ENCFF500KOA/@@download/ENCFF500KOA.bigBed GRCh38 released missing unfiltered alignments ENCFF486VYD bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF371IMA 13395172 ENCODE Processing Pipeline d67d2396afaaa9daf6e84ff63ad8bec0 https://www.encodeproject.org/files/ENCFF486VYD/@@download/ENCFF486VYD.bigBed GRCh38 released missing unfiltered alignments ENCFF488EMC bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF938QIC 13228534 ENCODE Processing Pipeline 3e460b032580c347f7cdc603865a5016 https://www.encodeproject.org/files/ENCFF488EMC/@@download/ENCFF488EMC.bigBed GRCh38 released missing unfiltered alignments ENCFF388TYU bed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086AMQ, ENCFF371IMA, ENCFF419RSJ, ENCFF938QIC 108938 ENCODE Processing Pipeline 97f1ac53cbf7b2049fdc18567c700d9c https://www.encodeproject.org/files/ENCFF388TYU/@@download/ENCFF388TYU.bed.gz GRCh38 released missing unfiltered alignments ENCFF389NWS bigBed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF650ELJ 230879 ENCODE Processing Pipeline c79dc28c65d8dd7aba44b581b57fafa1 https://www.encodeproject.org/files/ENCFF389NWS/@@download/ENCFF389NWS.bigBed hg19 released missing unfiltered alignments ENCFF254MQT bigBed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF654CST 174584 ENCODE Processing Pipeline 8fb42e86c799c6b61bb669915ed5a458 https://www.encodeproject.org/files/ENCFF254MQT/@@download/ENCFF254MQT.bigBed hg19 released missing unfiltered alignments ENCFF654CST bed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF229LJO, ENCFF323QXY, ENCFF524QUC 81512 ENCODE Processing Pipeline 89fe8e5c3e91937980c28c18f366c07b https://www.encodeproject.org/files/ENCFF654CST/@@download/ENCFF654CST.bed.gz hg19 released missing unfiltered alignments ENCFF650ELJ bed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF229LJO, ENCFF323QXY, ENCFF524QUC 94754 ENCODE Processing Pipeline 648ffa44acc0080b9f58e101e4240480 https://www.encodeproject.org/files/ENCFF650ELJ/@@download/ENCFF650ELJ.bed.gz hg19 released missing unfiltered alignments ENCFF000NCH bam alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NCS 648634950 Richard Myers, HAIB bdeb51cf894e34b87611dd4ca2874984 https://www.encodeproject.org/files/ENCFF000NCH/@@download/ENCFF000NCH.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NCI bigBed broadPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TST 356911 Richard Myers, HAIB 3a5ac12a8f9ed7832bd0bf84f34451bc https://www.encodeproject.org/files/ENCFF000NCI/@@download/ENCFF000NCI.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NCJ bigBed broadPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TSU 460664 Richard Myers, HAIB 75a89af354467e19663771a3ea349d4a https://www.encodeproject.org/files/ENCFF000NCJ/@@download/ENCFF000NCJ.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NCK bam alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NCU 829025116 Richard Myers, HAIB fb95c651cfbd8d42e0a667338d686e65 https://www.encodeproject.org/files/ENCFF000NCK/@@download/ENCFF000NCK.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NCM bigWig raw signal ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 32322502 Richard Myers, HAIB 49578abd40b744421ca3d11b52eb1d5e https://www.encodeproject.org/files/ENCFF000NCM/@@download/ENCFF000NCM.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NCN bigWig raw signal ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36463803 Richard Myers, HAIB 789e8c35a7faeea0e027c25626d75767 https://www.encodeproject.org/files/ENCFF000NCN/@@download/ENCFF000NCN.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NCS fastq reads ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1979544237 Richard Myers, HAIB 2071476ca403a05b3799d34cf6b800a6 https://www.encodeproject.org/files/ENCFF000NCS/@@download/ENCFF000NCS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NDA/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NCU fastq reads ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 2250617300 Richard Myers, HAIB 80c8b227d78a25a9af22858bb7878017 https://www.encodeproject.org/files/ENCFF000NCU/@@download/ENCFF000NCU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NDD/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF001TST bed broadPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 173563 Richard Myers, HAIB 1a57e99f0f400e614bbe8e12af0355ae https://www.encodeproject.org/files/ENCFF001TST/@@download/ENCFF001TST.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001TSU bed broadPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 223712 Richard Myers, HAIB 01382d717def855dd6f1cef166ee99fc https://www.encodeproject.org/files/ENCFF001TSU/@@download/ENCFF001TSU.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CFT bed narrowPeak optimal idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 383261 ENCODE Consortium Analysis Working Group ed04dad9591a53ab86cf4c71d4b97597 https://www.encodeproject.org/files/ENCFF002CFT/@@download/ENCFF002CFT.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF398EGO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE ENCFF002CFT 943871 ENCODE Consortium cd02a3e9e9e080e19cb803a390f9bc3c https://www.encodeproject.org/files/ENCFF398EGO/@@download/ENCFF398EGO.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF195MCG bam unfiltered alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCU, ENCFF643CGH 2571322407 ENCODE Processing Pipeline 7dedd663ec1c6bc6689084a9d09c7dc2 https://www.encodeproject.org/files/ENCFF195MCG/@@download/ENCFF195MCG.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF942WEL bam unfiltered alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCS, ENCFF807MUK 2228956611 ENCODE Processing Pipeline 45d70f414aa51015227dcc2c0e4becdd https://www.encodeproject.org/files/ENCFF942WEL/@@download/ENCFF942WEL.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF602PRS bam alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCS, ENCFF643CGH 364410770 ENCODE Processing Pipeline c83412a254e863c0c16dec967b6ca802 https://www.encodeproject.org/files/ENCFF602PRS/@@download/ENCFF602PRS.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF530CNR bam unfiltered alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCS, ENCFF643CGH 2232115892 ENCODE Processing Pipeline ac8a2561a58ba38b28b059c2e43b8d00 https://www.encodeproject.org/files/ENCFF530CNR/@@download/ENCFF530CNR.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF293LDW bam alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCU, ENCFF643CGH 528375158 ENCODE Processing Pipeline 4015d89c6ea4853e0d61a4915d6a7457 https://www.encodeproject.org/files/ENCFF293LDW/@@download/ENCFF293LDW.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF604IHW bam unfiltered alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCU, ENCFF807MUK 2567596248 ENCODE Processing Pipeline 86e55a506337870a2d55c2b2f208d791 https://www.encodeproject.org/files/ENCFF604IHW/@@download/ENCFF604IHW.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF642SKG bam alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCS, ENCFF807MUK 364681799 ENCODE Processing Pipeline fb80aa72981d6338a81e41b8ce2a8aca https://www.encodeproject.org/files/ENCFF642SKG/@@download/ENCFF642SKG.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF966AYA bam alignments ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCU, ENCFF807MUK 528559530 ENCODE Processing Pipeline af2f78b6faeed4661e1516fd966f5515 https://www.encodeproject.org/files/ENCFF966AYA/@@download/ENCFF966AYA.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF782WHQ bigWig fold change over control ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF105WJU, ENCFF602PRS, ENCFF717HZW 215489997 ENCODE Processing Pipeline efcf566dc7bdb6d66e99e1d20355df78 https://www.encodeproject.org/files/ENCFF782WHQ/@@download/ENCFF782WHQ.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF448TUL bigWig signal p-value ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF579FIX, ENCFF901AZD, ENCFF966AYA 330290002 ENCODE Processing Pipeline 1d4f6aca2809a3260bcca0a03decd521 https://www.encodeproject.org/files/ENCFF448TUL/@@download/ENCFF448TUL.bigWig hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF192RWG bigWig signal p-value ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF579FIX, ENCFF642SKG, ENCFF901AZD, ENCFF966AYA 505919977 ENCODE Processing Pipeline 372650f60cb79bbf719af4c7d5a4f520 https://www.encodeproject.org/files/ENCFF192RWG/@@download/ENCFF192RWG.bigWig hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF186RCU bigWig fold change over control ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF579FIX, ENCFF901AZD, ENCFF966AYA 233623276 ENCODE Processing Pipeline 20efad8f9cb5a0e6ba384941b45cd443 https://www.encodeproject.org/files/ENCFF186RCU/@@download/ENCFF186RCU.bigWig hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF822BGD bigWig signal p-value ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105WJU, ENCFF293LDW, ENCFF602PRS, ENCFF717HZW 517417355 ENCODE Processing Pipeline 8a20462ce067588bf48da35fc37d1b7f https://www.encodeproject.org/files/ENCFF822BGD/@@download/ENCFF822BGD.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF995NTI bigWig fold change over control ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105WJU, ENCFF293LDW, ENCFF602PRS, ENCFF717HZW 374249922 ENCODE Processing Pipeline dc1d946bc68d7775b7b24f3675ed40b8 https://www.encodeproject.org/files/ENCFF995NTI/@@download/ENCFF995NTI.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF543KDK bed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF105WJU, ENCFF602PRS, ENCFF717HZW 3454505 ENCODE Processing Pipeline 0137381c90257508085b686bc32bcd00 https://www.encodeproject.org/files/ENCFF543KDK/@@download/ENCFF543KDK.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF980CVX bigBed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF033RSK 7722060 ENCODE Processing Pipeline dcf0262c17e2df76a16ee3f8b1dd6acb https://www.encodeproject.org/files/ENCFF980CVX/@@download/ENCFF980CVX.bigBed hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF990ANB bigBed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF631NXF 9053240 ENCODE Processing Pipeline d4eb0995a223e577650ec880f47fc692 https://www.encodeproject.org/files/ENCFF990ANB/@@download/ENCFF990ANB.bigBed hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF645POH bed narrowPeak conservative idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF033RSK, ENCFF631NXF, ENCFF664XHQ 185416 ENCODE Processing Pipeline a43be316bfc8f0962c200e0fc7bbd9d1 https://www.encodeproject.org/files/ENCFF645POH/@@download/ENCFF645POH.bed.gz hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF711MZF bed narrowPeak optimal idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF533AHM, ENCFF543KDK, ENCFF846XTY 173541 ENCODE Processing Pipeline ee116f20f39cb4ab711450f1d56dfd07 https://www.encodeproject.org/files/ENCFF711MZF/@@download/ENCFF711MZF.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF818RPC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF711MZF 372108 ENCODE Processing Pipeline 869a47cfefed480fe8297c7b658000b6 https://www.encodeproject.org/files/ENCFF818RPC/@@download/ENCFF818RPC.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF462LIK bigWig signal p-value ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF579FIX, ENCFF642SKG, ENCFF901AZD 358844440 ENCODE Processing Pipeline fba0e06dc40fe9fd0ba72c701bbe6003 https://www.encodeproject.org/files/ENCFF462LIK/@@download/ENCFF462LIK.bigWig hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF723FZF bigWig signal p-value ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF105WJU, ENCFF602PRS, ENCFF717HZW 364521242 ENCODE Processing Pipeline 06cf088b53249d72ee197a9e10390549 https://www.encodeproject.org/files/ENCFF723FZF/@@download/ENCFF723FZF.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF135PKM bigWig fold change over control ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF579FIX, ENCFF642SKG, ENCFF901AZD 209854906 ENCODE Processing Pipeline 82434cfd3d67f713d764a22f92687468 https://www.encodeproject.org/files/ENCFF135PKM/@@download/ENCFF135PKM.bigWig hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF678TFX bigWig fold change over control ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF579FIX, ENCFF642SKG, ENCFF901AZD, ENCFF966AYA 367677003 ENCODE Processing Pipeline 2aed4eb6c4b3b60977bd03f76087d98f https://www.encodeproject.org/files/ENCFF678TFX/@@download/ENCFF678TFX.bigWig hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF033RSK bed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF579FIX, ENCFF642SKG, ENCFF901AZD 3506599 ENCODE Processing Pipeline d1ed86c6b4b54e36d8892c9e10e5d188 https://www.encodeproject.org/files/ENCFF033RSK/@@download/ENCFF033RSK.bed.gz hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF664XHQ bed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF579FIX, ENCFF642SKG, ENCFF901AZD, ENCFF966AYA 5196358 ENCODE Processing Pipeline 3d963551d4925d63c1789ddca0975ddb https://www.encodeproject.org/files/ENCFF664XHQ/@@download/ENCFF664XHQ.bed.gz hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF533AHM bed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF105WJU, ENCFF293LDW, ENCFF717HZW 3893851 ENCODE Processing Pipeline 878e4297d3b8e8550a968b48ea03a9fb https://www.encodeproject.org/files/ENCFF533AHM/@@download/ENCFF533AHM.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF846XTY bed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105WJU, ENCFF293LDW, ENCFF602PRS, ENCFF717HZW 1380086 ENCODE Processing Pipeline 86a2fdd388016c66c19ca1b1fc8e582e https://www.encodeproject.org/files/ENCFF846XTY/@@download/ENCFF846XTY.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF748MAA bigBed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF543KDK 7695509 ENCODE Processing Pipeline f7700b752cfc2b0b87d08eb48a2e4bcf https://www.encodeproject.org/files/ENCFF748MAA/@@download/ENCFF748MAA.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF672MFU bigBed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF664XHQ 11013866 ENCODE Processing Pipeline 8c11ffd369591dd21f3b4677fbd2a907 https://www.encodeproject.org/files/ENCFF672MFU/@@download/ENCFF672MFU.bigBed hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF135IKK bigBed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF533AHM 9058556 ENCODE Processing Pipeline 154fe1703f2f02d8546b80f06e725e81 https://www.encodeproject.org/files/ENCFF135IKK/@@download/ENCFF135IKK.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF574LWK bigBed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF846XTY 2714249 ENCODE Processing Pipeline 5c3475cc24f80bf649a79b344ce40ad8 https://www.encodeproject.org/files/ENCFF574LWK/@@download/ENCFF574LWK.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF453WIK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF645POH 387585 ENCODE Processing Pipeline 00f5b79a9421d618a72cb68dbcca62c5 https://www.encodeproject.org/files/ENCFF453WIK/@@download/ENCFF453WIK.bigBed hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF567LEJ bed narrowPeak conservative idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF533AHM, ENCFF543KDK, ENCFF846XTY 134593 ENCODE Processing Pipeline 3bf9ed9e04d2ab2a790da863f5fdc294 https://www.encodeproject.org/files/ENCFF567LEJ/@@download/ENCFF567LEJ.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF163VTC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF567LEJ 312557 ENCODE Processing Pipeline aceeabf7c74a25d6215ad4e4532434ab https://www.encodeproject.org/files/ENCFF163VTC/@@download/ENCFF163VTC.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF209KAN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF080RMP 443900 ENCODE Processing Pipeline 8f336445f87367478dd10488cd81ce65 https://www.encodeproject.org/files/ENCFF209KAN/@@download/ENCFF209KAN.bigBed hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF074KCT bigWig signal p-value ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF105WJU, ENCFF293LDW, ENCFF717HZW 383617748 ENCODE Processing Pipeline 39fc6469bdd78a7c8c25fcd3f8847b42 https://www.encodeproject.org/files/ENCFF074KCT/@@download/ENCFF074KCT.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF017UHV bigWig fold change over control ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF105WJU, ENCFF293LDW, ENCFF717HZW 233621072 ENCODE Processing Pipeline e09682b438c3e2b753a76eea39a02da6 https://www.encodeproject.org/files/ENCFF017UHV/@@download/ENCFF017UHV.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF631NXF bed narrowPeak peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF579FIX, ENCFF901AZD, ENCFF966AYA 3892753 ENCODE Processing Pipeline 3b78ed24857b2f33172aacc9e0c4ef5e https://www.encodeproject.org/files/ENCFF631NXF/@@download/ENCFF631NXF.bed.gz hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF080RMP bed narrowPeak optimal idr thresholded peaks ENCSR000BJR ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF033RSK, ENCFF631NXF, ENCFF664XHQ 222072 ENCODE Processing Pipeline cf7d2954902a39818ff7b875dc307a9e https://www.encodeproject.org/files/ENCFF080RMP/@@download/ENCFF080RMP.bed.gz hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF269TVU fastq reads ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 2 ENCFF687SPD 1940447078 Richard Myers, HAIB f01412b4192aa6fa91e50b4e420d62e4 SRA:SRR6214036 https://www.encodeproject.org/files/ENCFF269TVU/@@download/ENCFF269TVU.fastq.gz HiSeq 2000 /files/ENCFF102SYP/ released antibody characterized with exemption ENCFF687SPD fastq reads ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 1 ENCFF269TVU 1888817942 Richard Myers, HAIB bae293a922075c73644db67a863b09ea SRA:SRR6214036 https://www.encodeproject.org/files/ENCFF687SPD/@@download/ENCFF687SPD.fastq.gz HiSeq 2000 /files/ENCFF090EFT/ released antibody characterized with exemption ENCFF602TRG bam alignments ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF269TVU, ENCFF643CGH, ENCFF687SPD 2990563873 ENCODE Processing Pipeline 71c6a4ab979daf50ab9c81f4a447886d https://www.encodeproject.org/files/ENCFF602TRG/@@download/ENCFF602TRG.bam GRCh38 released antibody characterized with exemption ENCFF152TJI bam unfiltered alignments ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF269TVU, ENCFF643CGH, ENCFF687SPD 4309910018 ENCODE Processing Pipeline 6b33c42b2bd7c9b648d3ffa54c08f117 https://www.encodeproject.org/files/ENCFF152TJI/@@download/ENCFF152TJI.bam GRCh38 released antibody characterized with exemption ENCFF256ERR bam unfiltered alignments ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF269TVU, ENCFF687SPD, ENCFF807MUK 4302915198 ENCODE Processing Pipeline d46e3f22f7f6544c517b8dafcb2ab348 https://www.encodeproject.org/files/ENCFF256ERR/@@download/ENCFF256ERR.bam hg19 released antibody characterized with exemption ENCFF014UOC bam alignments ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF269TVU, ENCFF687SPD, ENCFF807MUK 2990707165 ENCODE Processing Pipeline decf2ae65ab6a3d1a36301128d52dd84 https://www.encodeproject.org/files/ENCFF014UOC/@@download/ENCFF014UOC.bam hg19 released antibody characterized with exemption ENCFF987IKB bed narrowPeak peaks ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF240ZFM, ENCFF602TRG 7092557 ENCODE Processing Pipeline 9592b7b3ce91ead0eeb0acaaee127c13 https://www.encodeproject.org/files/ENCFF987IKB/@@download/ENCFF987IKB.bed.gz GRCh38 released antibody characterized with exemption ENCFF735MBP bigWig signal p-value ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF240ZFM, ENCFF602TRG 977004329 ENCODE Processing Pipeline 3a410baabd66ea4c4c86f178135b1e61 https://www.encodeproject.org/files/ENCFF735MBP/@@download/ENCFF735MBP.bigWig GRCh38 released antibody characterized with exemption ENCFF119HZF bigBed narrowPeak peaks ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF987IKB 13025419 ENCODE Processing Pipeline 7dd43956faaa371c7b1018035560b9ef https://www.encodeproject.org/files/ENCFF119HZF/@@download/ENCFF119HZF.bigBed GRCh38 released antibody characterized with exemption ENCFF640OPA bigWig fold change over control ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF240ZFM, ENCFF602TRG 851885257 ENCODE Processing Pipeline 522e3b115b309c58e1cbdf4937f529a5 https://www.encodeproject.org/files/ENCFF640OPA/@@download/ENCFF640OPA.bigWig GRCh38 released antibody characterized with exemption ENCFF549FZH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF419RSJ, ENCFF987IKB 896655 ENCODE Processing Pipeline 14c79b8a8b0dbad197eaf50dc557dea8 https://www.encodeproject.org/files/ENCFF549FZH/@@download/ENCFF549FZH.bed.gz GRCh38 released antibody characterized with exemption ENCFF922WUM bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF549FZH 1704342 ENCODE Processing Pipeline d3e4a03f3f76a71a220e3e0b1d98054b https://www.encodeproject.org/files/ENCFF922WUM/@@download/ENCFF922WUM.bigBed GRCh38 released antibody characterized with exemption ENCFF157TQM bigWig signal p-value ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF014UOC, ENCFF300OHV 1060754693 ENCODE Processing Pipeline 516e221aea77e4b653a8b087dd4390a2 https://www.encodeproject.org/files/ENCFF157TQM/@@download/ENCFF157TQM.bigWig hg19 released antibody characterized with exemption ENCFF233SVA bed narrowPeak peaks ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF014UOC, ENCFF300OHV 7101031 ENCODE Processing Pipeline 2d49e6634181766e27cdca2f505122b9 https://www.encodeproject.org/files/ENCFF233SVA/@@download/ENCFF233SVA.bed.gz hg19 released antibody characterized with exemption ENCFF844VIL bigBed narrowPeak peaks ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF233SVA 13021346 ENCODE Processing Pipeline 34c8f8b8af5bc02bd87e6f9bcbd4b916 https://www.encodeproject.org/files/ENCFF844VIL/@@download/ENCFF844VIL.bigBed hg19 released antibody characterized with exemption ENCFF392ZZG bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF007BBM 1704071 ENCODE Processing Pipeline 344c51fc28818d02b54ab46271c7f172 https://www.encodeproject.org/files/ENCFF392ZZG/@@download/ENCFF392ZZG.bigBed hg19 released antibody characterized with exemption ENCFF007BBM bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF001TDO, ENCFF233SVA 897562 ENCODE Processing Pipeline e4116ff53e7533f362f2e6696cb67936 https://www.encodeproject.org/files/ENCFF007BBM/@@download/ENCFF007BBM.bed.gz hg19 released antibody characterized with exemption ENCFF547WRK bigWig fold change over control ENCSR930CPA ChIP-seq UBERON:0001157 transverse colon tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF014UOC, ENCFF300OHV 864858969 ENCODE Processing Pipeline a485e4617ec833a65648d90dba15c077 https://www.encodeproject.org/files/ENCFF547WRK/@@download/ENCFF547WRK.bigWig hg19 released antibody characterized with exemption ENCFF800QOR fastq reads ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF452KCG 2525641328 Richard Myers, HAIB 4c12dccad998c94da993389f5e336231 https://www.encodeproject.org/files/ENCFF800QOR/@@download/ENCFF800QOR.fastq.gz HiSeq 2000 /files/ENCFF527OHP/ released antibody characterized with exemption experiment not submitted to GEO ENCFF452KCG fastq reads ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF800QOR 2491204068 Richard Myers, HAIB fef20dce7ea8a2c1f74e344ae6e24293 https://www.encodeproject.org/files/ENCFF452KCG/@@download/ENCFF452KCG.fastq.gz HiSeq 2000 /files/ENCFF502WHI/ released antibody characterized with exemption experiment not submitted to GEO ENCFF553EOJ bam unfiltered alignments ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF452KCG, ENCFF800QOR, ENCFF807MUK 6000456457 ENCODE Processing Pipeline 3a51f80cd9d00b2165aaae83b254118d https://www.encodeproject.org/files/ENCFF553EOJ/@@download/ENCFF553EOJ.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF913EKV bam alignments ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF452KCG, ENCFF800QOR, ENCFF807MUK 4597791295 ENCODE Processing Pipeline 9ff7d23e89f30d471e43ce77791c0c4f https://www.encodeproject.org/files/ENCFF913EKV/@@download/ENCFF913EKV.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF777ZBE bam unfiltered alignments ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF452KCG, ENCFF643CGH, ENCFF800QOR 6026994274 ENCODE Processing Pipeline 4cffd29ff195052961cd64de450070f5 https://www.encodeproject.org/files/ENCFF777ZBE/@@download/ENCFF777ZBE.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF431GNR bam alignments ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF452KCG, ENCFF643CGH, ENCFF800QOR 4601549056 ENCODE Processing Pipeline fd177910333ea3062f555808ea4fd702 https://www.encodeproject.org/files/ENCFF431GNR/@@download/ENCFF431GNR.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF072JVL bed narrowPeak peaks ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF431GNR, ENCFF511XEA 6836316 ENCODE Processing Pipeline 770d55a6af1128ce10d1ef276620be48 https://www.encodeproject.org/files/ENCFF072JVL/@@download/ENCFF072JVL.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF755HOJ bigBed narrowPeak peaks ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF072JVL 13493520 ENCODE Processing Pipeline 8baf925850f91610336f376de569e32d https://www.encodeproject.org/files/ENCFF755HOJ/@@download/ENCFF755HOJ.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF250QNK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF072JVL, ENCFF419RSJ 397031 ENCODE Processing Pipeline 5727c4def99910e84785562826d2fdeb https://www.encodeproject.org/files/ENCFF250QNK/@@download/ENCFF250QNK.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF270DYF bigWig fold change over control ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF431GNR, ENCFF511XEA 1373570707 ENCODE Processing Pipeline d2263faebe6d0792e2839c0625491d30 https://www.encodeproject.org/files/ENCFF270DYF/@@download/ENCFF270DYF.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF511FZJ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF250QNK 827349 ENCODE Processing Pipeline 661b5706749d57b0eb500f817ca7fbf7 https://www.encodeproject.org/files/ENCFF511FZJ/@@download/ENCFF511FZJ.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF425JXG bigWig signal p-value ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF431GNR, ENCFF511XEA 1311506412 ENCODE Processing Pipeline 9dda38c13e89d11b4ba585e8fbd08a83 https://www.encodeproject.org/files/ENCFF425JXG/@@download/ENCFF425JXG.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF081RPC bigBed narrowPeak peaks ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF498MXX 13503641 ENCODE Processing Pipeline c2e5e92c962ceeb3a74120a03975f58f https://www.encodeproject.org/files/ENCFF081RPC/@@download/ENCFF081RPC.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF597BVM bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF335UAO 826256 ENCODE Processing Pipeline 385e198da4c6d9c77df029153b27bbd9 https://www.encodeproject.org/files/ENCFF597BVM/@@download/ENCFF597BVM.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF215PWS bigWig fold change over control ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF768NBN, ENCFF913EKV 1371986814 ENCODE Processing Pipeline 60800ac72b6dd7e6148a7c4dbc131857 https://www.encodeproject.org/files/ENCFF215PWS/@@download/ENCFF215PWS.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF335UAO bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF498MXX 400133 ENCODE Processing Pipeline 2ead68ee13c1e9a21e317844f429df2d https://www.encodeproject.org/files/ENCFF335UAO/@@download/ENCFF335UAO.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF866LFG bigWig signal p-value ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF768NBN, ENCFF913EKV 1308974422 ENCODE Processing Pipeline 0aabe9612123b7def0884a3530769620 https://www.encodeproject.org/files/ENCFF866LFG/@@download/ENCFF866LFG.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF498MXX bed narrowPeak peaks ENCSR861XGM ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF768NBN, ENCFF913EKV 6826330 ENCODE Processing Pipeline ef6b7bf3c7b703372dc65dd4382ecb3d https://www.encodeproject.org/files/ENCFF498MXX/@@download/ENCFF498MXX.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF461DSK fastq reads ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF245QAX 1387111400 Richard Myers, HAIB 8f4439c8d1dbabb390501ca9d65a6b45 SRA:SRR6213830 https://www.encodeproject.org/files/ENCFF461DSK/@@download/ENCFF461DSK.fastq.gz HiSeq 2000 /files/ENCFF951WSO/ released antibody characterized with exemption ENCFF245QAX fastq reads ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF461DSK 1415133262 Richard Myers, HAIB 22dc647f12bce3f55a467ead92a5caf3 SRA:SRR6213830 https://www.encodeproject.org/files/ENCFF245QAX/@@download/ENCFF245QAX.fastq.gz HiSeq 2000 /files/ENCFF960XDG/ released antibody characterized with exemption ENCFF175OKZ bam unfiltered alignments ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF245QAX, ENCFF461DSK, ENCFF643CGH 3440938984 ENCODE Processing Pipeline d2311eb2173edc34c4f70838b7d11466 https://www.encodeproject.org/files/ENCFF175OKZ/@@download/ENCFF175OKZ.bam GRCh38 released antibody characterized with exemption ENCFF542DGC bam unfiltered alignments ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF245QAX, ENCFF461DSK, ENCFF807MUK 3427732033 ENCODE Processing Pipeline 36fbefff167135f1054fc5604e067cd3 https://www.encodeproject.org/files/ENCFF542DGC/@@download/ENCFF542DGC.bam hg19 released antibody characterized with exemption ENCFF719ASG bam alignments ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF245QAX, ENCFF461DSK, ENCFF807MUK 2584802167 ENCODE Processing Pipeline 53135d487a230d142d9d9762da9011f4 https://www.encodeproject.org/files/ENCFF719ASG/@@download/ENCFF719ASG.bam hg19 released antibody characterized with exemption ENCFF210CWN bam alignments ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF245QAX, ENCFF461DSK, ENCFF643CGH 2586302527 ENCODE Processing Pipeline 15b1d1966f32f73388282d6d99c13999 https://www.encodeproject.org/files/ENCFF210CWN/@@download/ENCFF210CWN.bam GRCh38 released antibody characterized with exemption ENCFF312CPT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF291RDN 508006 ENCODE Processing Pipeline 627d8419452a6bc9ef527af2075f1c78 https://www.encodeproject.org/files/ENCFF312CPT/@@download/ENCFF312CPT.bigBed GRCh38 released antibody characterized with exemption ENCFF318HJW bigWig signal p-value ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF719ASG 814674404 ENCODE Processing Pipeline 62e7ee8ead6e036af3ad0c877a3c7cc7 https://www.encodeproject.org/files/ENCFF318HJW/@@download/ENCFF318HJW.bigWig hg19 released antibody characterized with exemption ENCFF218YPP bigBed narrowPeak peaks ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF149EWP 11460498 ENCODE Processing Pipeline ae90b304646c502d4f981064d3658ce3 https://www.encodeproject.org/files/ENCFF218YPP/@@download/ENCFF218YPP.bigBed GRCh38 released antibody characterized with exemption ENCFF291RDN bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF149EWP, ENCFF419RSJ 264626 ENCODE Processing Pipeline 942956b0f1a7614630124ad98e5ea812 https://www.encodeproject.org/files/ENCFF291RDN/@@download/ENCFF291RDN.bed.gz GRCh38 released antibody characterized with exemption ENCFF275YIZ bigWig fold change over control ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF719ASG 864478934 ENCODE Processing Pipeline 6dcad8e976da3a8acaad9061736d449d https://www.encodeproject.org/files/ENCFF275YIZ/@@download/ENCFF275YIZ.bigWig hg19 released antibody characterized with exemption ENCFF052MLC bed narrowPeak peaks ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF719ASG 5164567 ENCODE Processing Pipeline 564e358518e174fd8563fa6c0eef389d https://www.encodeproject.org/files/ENCFF052MLC/@@download/ENCFF052MLC.bed.gz hg19 released antibody characterized with exemption ENCFF824SMX bigBed narrowPeak peaks ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF052MLC 11454151 ENCODE Processing Pipeline 609b531ce5fd4f508796cbf72f54d0e3 https://www.encodeproject.org/files/ENCFF824SMX/@@download/ENCFF824SMX.bigBed hg19 released antibody characterized with exemption ENCFF597JRR bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF052MLC 267172 ENCODE Processing Pipeline 4fbb8144d469503075301fcc21bec0d5 https://www.encodeproject.org/files/ENCFF597JRR/@@download/ENCFF597JRR.bed.gz hg19 released antibody characterized with exemption ENCFF739GQQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF597JRR 510139 ENCODE Processing Pipeline 76e2d100d2edb564cd95b66e3f1db960 https://www.encodeproject.org/files/ENCFF739GQQ/@@download/ENCFF739GQQ.bigBed hg19 released antibody characterized with exemption ENCFF354PLP bigWig signal p-value ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF210CWN 872667711 ENCODE Processing Pipeline 20885c65ec39e562aae79f2befde9675 https://www.encodeproject.org/files/ENCFF354PLP/@@download/ENCFF354PLP.bigWig GRCh38 released antibody characterized with exemption ENCFF149EWP bed narrowPeak peaks ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF210CWN 5158845 ENCODE Processing Pipeline 88d804afc4b2947d76e97343b6046dda https://www.encodeproject.org/files/ENCFF149EWP/@@download/ENCFF149EWP.bed.gz GRCh38 released antibody characterized with exemption ENCFF977MTB bigWig fold change over control ENCSR551MLB ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF210CWN 846333595 ENCODE Processing Pipeline 0d2b9bb5a3b07813e82a68daf45168ae https://www.encodeproject.org/files/ENCFF977MTB/@@download/ENCFF977MTB.bigWig GRCh38 released antibody characterized with exemption ENCFF774ZKP fastq reads ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF569YBX 4021222613 Richard Myers, HAIB 5ea9b79c0c68ea3e4c230ef7216e6baf https://www.encodeproject.org/files/ENCFF774ZKP/@@download/ENCFF774ZKP.fastq.gz HiSeq 2000 /files/ENCFF339GDO/ released antibody characterized with exemption experiment not submitted to GEO ENCFF569YBX fastq reads ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF774ZKP 4185713599 Richard Myers, HAIB 61799e593be56e525bc613a20cff3c01 https://www.encodeproject.org/files/ENCFF569YBX/@@download/ENCFF569YBX.fastq.gz HiSeq 2000 /files/ENCFF997CZF/ released antibody characterized with exemption experiment not submitted to GEO ENCFF897NGB bam unfiltered alignments ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF569YBX, ENCFF643CGH, ENCFF774ZKP 8889139472 ENCODE Processing Pipeline 68461bee49dcf661ff6c3d3334e1050a https://www.encodeproject.org/files/ENCFF897NGB/@@download/ENCFF897NGB.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF977PWY bam unfiltered alignments ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF569YBX, ENCFF774ZKP, ENCFF807MUK 8875747691 ENCODE Processing Pipeline 4264d1283f55081c75fc4fc1b3ca3538 https://www.encodeproject.org/files/ENCFF977PWY/@@download/ENCFF977PWY.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF629VOX bam alignments ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF569YBX, ENCFF774ZKP, ENCFF807MUK 6585537785 ENCODE Processing Pipeline 2b49dfd04ddd71d475598af245cb6e92 https://www.encodeproject.org/files/ENCFF629VOX/@@download/ENCFF629VOX.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF459XGP bam alignments ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF569YBX, ENCFF643CGH, ENCFF774ZKP 6585661801 ENCODE Processing Pipeline 4e665c215727ea8ccdf410ba6e5ab5b9 https://www.encodeproject.org/files/ENCFF459XGP/@@download/ENCFF459XGP.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF518RBV bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF229NAV 2139128 ENCODE Processing Pipeline 93dec22a46a82f1beb89a0e7f0f256c3 https://www.encodeproject.org/files/ENCFF518RBV/@@download/ENCFF518RBV.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF996MPK bigWig fold change over control ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF459XGP, ENCFF518UMI 1775529347 ENCODE Processing Pipeline f275f48759dafe908b898a9155b7d0c1 https://www.encodeproject.org/files/ENCFF996MPK/@@download/ENCFF996MPK.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF411YXA bed narrowPeak peaks ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF459XGP, ENCFF518UMI 7128601 ENCODE Processing Pipeline 0f5421783fae00fd425bfde43281a81f https://www.encodeproject.org/files/ENCFF411YXA/@@download/ENCFF411YXA.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF815KYP bigBed narrowPeak peaks ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF411YXA 12538511 ENCODE Processing Pipeline 3caf7095af42d26f7b7d8876dd896351 https://www.encodeproject.org/files/ENCFF815KYP/@@download/ENCFF815KYP.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF276XLL bed narrowPeak peaks ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF629VOX, ENCFF978EZN 7223230 ENCODE Processing Pipeline 49e79d9ec02c502d92c45e7ff67c44cd https://www.encodeproject.org/files/ENCFF276XLL/@@download/ENCFF276XLL.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF651FPL bigBed narrowPeak peaks ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF276XLL 12648245 ENCODE Processing Pipeline 19b708cc9f808f0a8b0a649f62e2d3ea https://www.encodeproject.org/files/ENCFF651FPL/@@download/ENCFF651FPL.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF223DJX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF411YXA, ENCFF419RSJ 999492 ENCODE Processing Pipeline c59510a1099b89161a1601b70ae8bb09 https://www.encodeproject.org/files/ENCFF223DJX/@@download/ENCFF223DJX.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF619RKX bigWig fold change over control ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF629VOX, ENCFF978EZN 1736507023 ENCODE Processing Pipeline 5a97d428f9743c028f839d68e6a3c8f4 https://www.encodeproject.org/files/ENCFF619RKX/@@download/ENCFF619RKX.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF277NOP bigWig signal p-value ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF459XGP, ENCFF518UMI 1653101795 ENCODE Processing Pipeline 2427dfed14ef176107ccc63c4f462e62 https://www.encodeproject.org/files/ENCFF277NOP/@@download/ENCFF277NOP.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF416DBW bigWig signal p-value ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF629VOX, ENCFF978EZN 1640925478 ENCODE Processing Pipeline d5f583b15cc60ee4a3d521b8909e630c https://www.encodeproject.org/files/ENCFF416DBW/@@download/ENCFF416DBW.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF229NAV bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF276XLL 1025791 ENCODE Processing Pipeline 21ee653ad4a701283601d327d84e101c https://www.encodeproject.org/files/ENCFF229NAV/@@download/ENCFF229NAV.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF992LHP bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR936JHB ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF223DJX 2092808 ENCODE Processing Pipeline 5de59edd52379f8db2834a65799ab318 https://www.encodeproject.org/files/ENCFF992LHP/@@download/ENCFF992LHP.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF296CSX fastq reads ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1340132818 Richard Myers, HAIB cee15f1565ffcf1d98c86600700b3b35 SRA:SRR6213103 https://www.encodeproject.org/files/ENCFF296CSX/@@download/ENCFF296CSX.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption biological replicates with identical biosample ENCFF269CGY fastq reads ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1593141558 Richard Myers, HAIB dff495e3e08f692b300103c8f85b8524 SRA:SRR6213102 https://www.encodeproject.org/files/ENCFF269CGY/@@download/ENCFF269CGY.fastq.gz HiSeq 2000 /files/ENCFF977SGP/ released antibody characterized with exemption biological replicates with identical biosample ENCFF471SKP bam unfiltered alignments ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 50 ENCFF296CSX, ENCFF643CGH 1522272174 ENCODE Processing Pipeline ce2c1e09e5d1e443b527f85da6cdd75b https://www.encodeproject.org/files/ENCFF471SKP/@@download/ENCFF471SKP.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF924NOS bam unfiltered alignments ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 50 ENCFF269CGY, ENCFF643CGH 1799863824 ENCODE Processing Pipeline 989178d4fbd39e0b6269a03383a1599d https://www.encodeproject.org/files/ENCFF924NOS/@@download/ENCFF924NOS.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF847XNM bam alignments ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 50 ENCFF269CGY, ENCFF643CGH 1359912781 ENCODE Processing Pipeline ce70f6149f7fd2631d627f6130c54596 https://www.encodeproject.org/files/ENCFF847XNM/@@download/ENCFF847XNM.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF855ZLU bam alignments ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 50 ENCFF296CSX, ENCFF643CGH 1167697886 ENCODE Processing Pipeline d7c26e09a044556145403cbbc9978499 https://www.encodeproject.org/files/ENCFF855ZLU/@@download/ENCFF855ZLU.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF769YJR bigWig signal p-value ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF610PNU, ENCFF847XNM 1006439687 ENCODE Processing Pipeline e4dc19f2767208ca72a6e8cfed506dec https://www.encodeproject.org/files/ENCFF769YJR/@@download/ENCFF769YJR.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF097YUB bigWig fold change over control ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF610PNU, ENCFF847XNM 890209037 ENCODE Processing Pipeline fe3000541460e6cf98e2c09c29ebfb67 https://www.encodeproject.org/files/ENCFF097YUB/@@download/ENCFF097YUB.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF477NZX bigWig signal p-value ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF855ZLU 618064200 ENCODE Processing Pipeline 677f1f2b1994374af5fe08f6234993e3 https://www.encodeproject.org/files/ENCFF477NZX/@@download/ENCFF477NZX.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF902TMK bigWig signal p-value ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF200YPH, ENCFF610PNU, ENCFF847XNM, ENCFF855ZLU 1314243642 ENCODE Processing Pipeline c53bfc60891828b758fd8187d0843198 https://www.encodeproject.org/files/ENCFF902TMK/@@download/ENCFF902TMK.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF807UQJ bigWig fold change over control ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF855ZLU 623559704 ENCODE Processing Pipeline a9f96539c40c4fa3a4fa39431cbd765a https://www.encodeproject.org/files/ENCFF807UQJ/@@download/ENCFF807UQJ.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF227URY bigWig fold change over control ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF200YPH, ENCFF610PNU, ENCFF847XNM, ENCFF855ZLU 1297344615 ENCODE Processing Pipeline c5899c43028645eb57ccb81062cdcc10 https://www.encodeproject.org/files/ENCFF227URY/@@download/ENCFF227URY.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF545BKB bed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF855ZLU 5310791 ENCODE Processing Pipeline d3acf2214cdb5a55cec9bb3645b5b35b https://www.encodeproject.org/files/ENCFF545BKB/@@download/ENCFF545BKB.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF210YMT bigBed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF332CDD 11561141 ENCODE Processing Pipeline 54d05816a5884a346fabcfe572f230cd https://www.encodeproject.org/files/ENCFF210YMT/@@download/ENCFF210YMT.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF168JLI bed narrowPeak optimal idr thresholded peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF282KOR, ENCFF332CDD, ENCFF419RSJ, ENCFF545BKB 428753 ENCODE Processing Pipeline 97ade72a55786d85f194cd408fc1ca22 https://www.encodeproject.org/files/ENCFF168JLI/@@download/ENCFF168JLI.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF879AIC bigBed narrowPeak optimal idr thresholded peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF168JLI 754225 ENCODE Processing Pipeline 707cba83d5c86f13007bbb9d4dd73f26 https://www.encodeproject.org/files/ENCFF879AIC/@@download/ENCFF879AIC.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF778DUG bigBed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF282KOR 11534778 ENCODE Processing Pipeline 832030bcb2105fe6ddb742b04d0e45e8 https://www.encodeproject.org/files/ENCFF778DUG/@@download/ENCFF778DUG.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF168JTA bed narrowPeak conservative idr thresholded peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF282KOR, ENCFF332CDD, ENCFF419RSJ, ENCFF545BKB 387691 ENCODE Processing Pipeline 49d98c495e526b930ddcb73c6d91ffd7 https://www.encodeproject.org/files/ENCFF168JTA/@@download/ENCFF168JTA.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF332CDD bed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF610PNU, ENCFF847XNM 6079275 ENCODE Processing Pipeline 07cc669f1970864841f58ea4781d3d3c https://www.encodeproject.org/files/ENCFF332CDD/@@download/ENCFF332CDD.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF282KOR bed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF200YPH, ENCFF610PNU, ENCFF847XNM, ENCFF855ZLU 6633902 ENCODE Processing Pipeline 196b522bbfdd9c1da78573a7654e0f2a https://www.encodeproject.org/files/ENCFF282KOR/@@download/ENCFF282KOR.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF228QLU bigBed narrowPeak conservative idr thresholded peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF168JTA 699389 ENCODE Processing Pipeline 1171180a67a4a3ba990c6b1fa092fae7 https://www.encodeproject.org/files/ENCFF228QLU/@@download/ENCFF228QLU.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF942SEI bigBed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF545BKB 11332036 ENCODE Processing Pipeline 594b2b2eac60502a6866ee0585c0cd04 https://www.encodeproject.org/files/ENCFF942SEI/@@download/ENCFF942SEI.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF381WUT bam unfiltered alignments ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 50 ENCFF296CSX, ENCFF807MUK 1513585617 ENCODE Processing Pipeline a86c4221614a433cb4b97e80d8f2c063 https://www.encodeproject.org/files/ENCFF381WUT/@@download/ENCFF381WUT.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF111MMJ bam unfiltered alignments ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 50 ENCFF269CGY, ENCFF807MUK 1789446113 ENCODE Processing Pipeline 1137e6dcbe1cdabb301086691e0debd9 https://www.encodeproject.org/files/ENCFF111MMJ/@@download/ENCFF111MMJ.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF276ETD bam alignments ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 50 ENCFF269CGY, ENCFF807MUK 1359599673 ENCODE Processing Pipeline 9db0e68eebc19ede14ba39513da51f68 https://www.encodeproject.org/files/ENCFF276ETD/@@download/ENCFF276ETD.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF379HIU bam alignments ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 50 ENCFF296CSX, ENCFF807MUK 1167416914 ENCODE Processing Pipeline 8e340271b5885bcd69f61a9881e42474 https://www.encodeproject.org/files/ENCFF379HIU/@@download/ENCFF379HIU.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF990SZO bigBed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF474ZPF 11520101 ENCODE Processing Pipeline d03faf6e1aecd0285c418ad8030d2e57 https://www.encodeproject.org/files/ENCFF990SZO/@@download/ENCFF990SZO.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF474ZPF bed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF276ETD, ENCFF321UJV, ENCFF379HIU 6628021 ENCODE Processing Pipeline f44c6d1cfd3cde66666b84fcc8e20549 https://www.encodeproject.org/files/ENCFF474ZPF/@@download/ENCFF474ZPF.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF102KSZ bigWig signal p-value ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF276ETD, ENCFF321UJV 1005843858 ENCODE Processing Pipeline 19ac1884aeb478512bba237f442a189d https://www.encodeproject.org/files/ENCFF102KSZ/@@download/ENCFF102KSZ.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF320OWB bed narrowPeak conservative idr thresholded peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF047WBC, ENCFF125PLO, ENCFF474ZPF 384885 ENCODE Processing Pipeline 63f7a2c322af2ee2a217c3d47a54b1f4 https://www.encodeproject.org/files/ENCFF320OWB/@@download/ENCFF320OWB.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF111TCG bigBed narrowPeak optimal idr thresholded peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF786DKS 737769 ENCODE Processing Pipeline 47b0e18a2ca0f307e5082cc4710cf393 https://www.encodeproject.org/files/ENCFF111TCG/@@download/ENCFF111TCG.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF714NQE bigWig signal p-value ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF379HIU 597934303 ENCODE Processing Pipeline d461193d480fdc513852bad066ccf52b https://www.encodeproject.org/files/ENCFF714NQE/@@download/ENCFF714NQE.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF548DBT bigWig signal p-value ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF276ETD, ENCFF321UJV, ENCFF379HIU 1173898446 ENCODE Processing Pipeline 056979cbdff35c2509361d37745f659c https://www.encodeproject.org/files/ENCFF548DBT/@@download/ENCFF548DBT.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF783CFQ bigWig fold change over control ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF276ETD, ENCFF321UJV 890539742 ENCODE Processing Pipeline 445e328887b225ad25931ffdaf7a70a2 https://www.encodeproject.org/files/ENCFF783CFQ/@@download/ENCFF783CFQ.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF722DMF bigWig fold change over control ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF379HIU 627532358 ENCODE Processing Pipeline 77dd3e28062f5b5e3b5e26ae287bc35f https://www.encodeproject.org/files/ENCFF722DMF/@@download/ENCFF722DMF.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF294WXK bigWig fold change over control ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF276ETD, ENCFF321UJV, ENCFF379HIU 1306427596 ENCODE Processing Pipeline adaa37c9c9482cef8462b7348ae3acec https://www.encodeproject.org/files/ENCFF294WXK/@@download/ENCFF294WXK.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF125PLO bed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF276ETD, ENCFF321UJV 6079049 ENCODE Processing Pipeline 0c1c0a603aa87fcd889217b1fc1ee62b https://www.encodeproject.org/files/ENCFF125PLO/@@download/ENCFF125PLO.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF047WBC bed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF379HIU 5314400 ENCODE Processing Pipeline 37fd80ee2f41d36cd1939bf965d71815 https://www.encodeproject.org/files/ENCFF047WBC/@@download/ENCFF047WBC.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF068IOE bigBed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF125PLO 11555384 ENCODE Processing Pipeline 16bca410a561881ae2c1e068ceff8678 https://www.encodeproject.org/files/ENCFF068IOE/@@download/ENCFF068IOE.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF152MFV bigBed narrowPeak conservative idr thresholded peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF320OWB 693875 ENCODE Processing Pipeline 1d551a9bff1d1ce891f02c3b1089ec26 https://www.encodeproject.org/files/ENCFF152MFV/@@download/ENCFF152MFV.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF297PSO bigBed narrowPeak peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF047WBC 11337415 ENCODE Processing Pipeline 8b8d528e09f8f725e600388a5ffc4af9 https://www.encodeproject.org/files/ENCFF297PSO/@@download/ENCFF297PSO.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF786DKS bed narrowPeak optimal idr thresholded peaks ENCSR310NYI ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF047WBC, ENCFF125PLO, ENCFF474ZPF 417839 ENCODE Processing Pipeline cea1a5e5ed8c5d53eed103f964f51b28 https://www.encodeproject.org/files/ENCFF786DKS/@@download/ENCFF786DKS.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF000QWI bam alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QWY 241257212 Richard Myers, HAIB c6cc0febbca4536c95f92abcfb912b95 https://www.encodeproject.org/files/ENCFF000QWI/@@download/ENCFF000QWI.bam hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF000QWJ bigBed broadPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UOV 117590 Richard Myers, HAIB c868d442d1e6d1ce7c0f4c985169952d https://www.encodeproject.org/files/ENCFF000QWJ/@@download/ENCFF000QWJ.bigBed hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF000QWK bam alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QWW 405832537 Richard Myers, HAIB f95b7ba81a6485bb4696d681f09aa3fd https://www.encodeproject.org/files/ENCFF000QWK/@@download/ENCFF000QWK.bam hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF000QWL bigBed broadPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UOW 663154 Richard Myers, HAIB 3fede79166fcc3a0304c10e2e66b214a https://www.encodeproject.org/files/ENCFF000QWL/@@download/ENCFF000QWL.bigBed hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF000QWM bigWig raw signal ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 1 12105697 Richard Myers, HAIB 880634685d17935f49a3d9f7488aa029 https://www.encodeproject.org/files/ENCFF000QWM/@@download/ENCFF000QWM.bigWig hg19 archived mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF000QWO bigWig raw signal ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 1 8069953 Richard Myers, HAIB 72869a7482a66a8175d83db2d4ed6d50 https://www.encodeproject.org/files/ENCFF000QWO/@@download/ENCFF000QWO.bigWig hg19 archived mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF000QWW fastq reads ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 1 25 single-ended 307892911 Richard Myers, HAIB 3b8935a2a2f80c966e27fcabbeb74822 https://www.encodeproject.org/files/ENCFF000QWW/@@download/ENCFF000QWW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QXN/ released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF000QWY fastq reads ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 1 25 single-ended 200298679 Richard Myers, HAIB a1678b9b8bc8b2bd0aede0b0dfea82a2 https://www.encodeproject.org/files/ENCFF000QWY/@@download/ENCFF000QWY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QXN/ released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF001UOV bed broadPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 1 50358 Richard Myers, HAIB dc081a90c8e256f79f8d2419478a2fc1 https://www.encodeproject.org/files/ENCFF001UOV/@@download/ENCFF001UOV.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF001UOW bed broadPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 1 365908 Richard Myers, HAIB 461117c298ded6fa4369897c49759d54 https://www.encodeproject.org/files/ENCFF001UOW/@@download/ENCFF001UOW.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF002CNH bed narrowPeak optimal idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 299329 ENCODE Consortium Analysis Working Group a744075d752f05f90fc61e946d27754c https://www.encodeproject.org/files/ENCFF002CNH/@@download/ENCFF002CNH.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF067SPT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE ENCFF002CNH 561316 ENCODE Consortium 14cd398ef678df81ff3c418b307c924c https://www.encodeproject.org/files/ENCFF067SPT/@@download/ENCFF067SPT.bigBed hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF257YRW bam alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000QWY, ENCFF807MUK 136915757 ENCODE Processing Pipeline 9927e17002c837d5f80cd4cd5c96bb4b https://www.encodeproject.org/files/ENCFF257YRW/@@download/ENCFF257YRW.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF528VHB bam unfiltered alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000QWY, ENCFF807MUK 317167248 ENCODE Processing Pipeline 414a3261ca07752fc95473b3b2c3e797 https://www.encodeproject.org/files/ENCFF528VHB/@@download/ENCFF528VHB.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF462QPA bam unfiltered alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000QWY, ENCFF643CGH 318172148 ENCODE Processing Pipeline be3e8217d56e07ce7fbd2ea7d3228a53 https://www.encodeproject.org/files/ENCFF462QPA/@@download/ENCFF462QPA.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF450GSC bam alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000QWY, ENCFF643CGH 136699981 ENCODE Processing Pipeline 180a2173713c208defdec19a770596ce https://www.encodeproject.org/files/ENCFF450GSC/@@download/ENCFF450GSC.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF034ZGA bam alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000QWW, ENCFF643CGH 285553914 ENCODE Processing Pipeline 9618070dadc022121de34d5528fb5b74 https://www.encodeproject.org/files/ENCFF034ZGA/@@download/ENCFF034ZGA.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF438XDP bam unfiltered alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000QWW, ENCFF643CGH 507087427 ENCODE Processing Pipeline 1f572b55ab7c0f60338ebc08f45e560a https://www.encodeproject.org/files/ENCFF438XDP/@@download/ENCFF438XDP.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF161AYB bam alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000QWW, ENCFF807MUK 285953767 ENCODE Processing Pipeline 7b4ddf111ce203d89788d1cbec2c4528 https://www.encodeproject.org/files/ENCFF161AYB/@@download/ENCFF161AYB.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF648ANZ bam unfiltered alignments ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000QWW, ENCFF807MUK 506221329 ENCODE Processing Pipeline 76dc717be87f20f560c2da4e904027f2 https://www.encodeproject.org/files/ENCFF648ANZ/@@download/ENCFF648ANZ.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF576MQI bigWig signal p-value ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF032SQZ, ENCFF257YRW 133950590 ENCODE Processing Pipeline 70c695dcd0ed0ea50fe67969c6ec785d https://www.encodeproject.org/files/ENCFF576MQI/@@download/ENCFF576MQI.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF510WZL bed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF032SQZ, ENCFF257YRW 2819827 ENCODE Processing Pipeline a87f8be6a5385104cb344a3d2bd94a7a https://www.encodeproject.org/files/ENCFF510WZL/@@download/ENCFF510WZL.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF398FBV bed narrowPeak optimal idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF510WZL, ENCFF718CML, ENCFF954MNX 185148 ENCODE Processing Pipeline efd800edbc1a0fba7b1c1a1ec8fb415d https://www.encodeproject.org/files/ENCFF398FBV/@@download/ENCFF398FBV.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF490QPI bigWig signal p-value ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF032SQZ, ENCFF161AYB 132039449 ENCODE Processing Pipeline dbfcaf98f57caccab42e007b864f19b1 https://www.encodeproject.org/files/ENCFF490QPI/@@download/ENCFF490QPI.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF542RLV bed narrowPeak conservative idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF510WZL, ENCFF718CML, ENCFF954MNX 176595 ENCODE Processing Pipeline daae11f224bc7cea7ab2ddc32d3ebe88 https://www.encodeproject.org/files/ENCFF542RLV/@@download/ENCFF542RLV.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF644AYN bigWig signal p-value ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF032SQZ, ENCFF161AYB, ENCFF257YRW 119083047 ENCODE Processing Pipeline a319bc4aaadb8f14b62b83a61dd15fe6 https://www.encodeproject.org/files/ENCFF644AYN/@@download/ENCFF644AYN.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF271VSE bigWig fold change over control ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF032SQZ, ENCFF161AYB 130791299 ENCODE Processing Pipeline 5e5668809a3210ef73cbffdf4c5ba14d https://www.encodeproject.org/files/ENCFF271VSE/@@download/ENCFF271VSE.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF718CML bed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF032SQZ, ENCFF161AYB, ENCFF257YRW 4619500 ENCODE Processing Pipeline e990bcd64db7964dbd1c63ca6d02d632 https://www.encodeproject.org/files/ENCFF718CML/@@download/ENCFF718CML.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF478IMF bigWig fold change over control ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF032SQZ, ENCFF257YRW 139622928 ENCODE Processing Pipeline a6c5e1ca5179b35831a55b34580bbd1a https://www.encodeproject.org/files/ENCFF478IMF/@@download/ENCFF478IMF.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF416LRH bigWig fold change over control ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF032SQZ, ENCFF161AYB, ENCFF257YRW 245895391 ENCODE Processing Pipeline f1e66800e7628766f9f348843449ae33 https://www.encodeproject.org/files/ENCFF416LRH/@@download/ENCFF416LRH.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF954MNX bed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF032SQZ, ENCFF161AYB 4017745 ENCODE Processing Pipeline ecdf168ac071ca6829d0be3973069f39 https://www.encodeproject.org/files/ENCFF954MNX/@@download/ENCFF954MNX.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF843TQZ bigBed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF718CML 10390403 ENCODE Processing Pipeline 658c459602e7089a90a0f657517fa146 https://www.encodeproject.org/files/ENCFF843TQZ/@@download/ENCFF843TQZ.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF481YHD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF398FBV 390588 ENCODE Processing Pipeline 275ee2574ffc65665261edd436b07038 https://www.encodeproject.org/files/ENCFF481YHD/@@download/ENCFF481YHD.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF122PYD bigBed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF510WZL 6674441 ENCODE Processing Pipeline 8ce7115119d5f87ef14829ec206c8201 https://www.encodeproject.org/files/ENCFF122PYD/@@download/ENCFF122PYD.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF902FND bigBed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF954MNX 9521531 ENCODE Processing Pipeline 01e32ca0c404f1b6b2dd96983082f330 https://www.encodeproject.org/files/ENCFF902FND/@@download/ENCFF902FND.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF394XBU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF542RLV 376357 ENCODE Processing Pipeline d12a099b7e79d56cafe822a7d2ed2b28 https://www.encodeproject.org/files/ENCFF394XBU/@@download/ENCFF394XBU.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF240XIO bigWig fold change over control ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF034ZGA, ENCFF450GSC, ENCFF902AOQ 245603459 ENCODE Processing Pipeline 32e104e6015aef16033aec302ec19618 https://www.encodeproject.org/files/ENCFF240XIO/@@download/ENCFF240XIO.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF579YOW bed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF450GSC, ENCFF902AOQ 2767319 ENCODE Processing Pipeline 05c12887e4709b37cdb0b0fc85bbde8e https://www.encodeproject.org/files/ENCFF579YOW/@@download/ENCFF579YOW.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF051MWO bigBed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF528VUJ 10386992 ENCODE Processing Pipeline e66fae819208dd47142533c6c71bbedb https://www.encodeproject.org/files/ENCFF051MWO/@@download/ENCFF051MWO.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF085CNS bed narrowPeak conservative idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF423LGE, ENCFF528VUJ, ENCFF579YOW 179654 ENCODE Processing Pipeline 3c055e3cd78f222aa85f1d14868b371b https://www.encodeproject.org/files/ENCFF085CNS/@@download/ENCFF085CNS.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF385ZTD bed narrowPeak optimal idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF423LGE, ENCFF528VUJ, ENCFF579YOW 191681 ENCODE Processing Pipeline f182cd7d7ebf239fd97821b086b867f6 https://www.encodeproject.org/files/ENCFF385ZTD/@@download/ENCFF385ZTD.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF012CVJ bigWig signal p-value ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF034ZGA, ENCFF902AOQ 132276672 ENCODE Processing Pipeline 2e6e574bfd14c20cfd95a014aa39f53b https://www.encodeproject.org/files/ENCFF012CVJ/@@download/ENCFF012CVJ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF808GUB bigWig fold change over control ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF450GSC, ENCFF902AOQ 139360603 ENCODE Processing Pipeline 47c17fbcf6716a3f1fba32295b34ef06 https://www.encodeproject.org/files/ENCFF808GUB/@@download/ENCFF808GUB.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF865YOS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF385ZTD 400649 ENCODE Processing Pipeline 085d3593db838f506c1f23056b7c12e1 https://www.encodeproject.org/files/ENCFF865YOS/@@download/ENCFF865YOS.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF733BXL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF085CNS 380957 ENCODE Processing Pipeline e007b720d3289d823df63c46b667555f https://www.encodeproject.org/files/ENCFF733BXL/@@download/ENCFF733BXL.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF528VUJ bed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF034ZGA, ENCFF450GSC, ENCFF902AOQ 4618947 ENCODE Processing Pipeline 91f045ee40bd7a90e1a6f39693133df9 https://www.encodeproject.org/files/ENCFF528VUJ/@@download/ENCFF528VUJ.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF124DIY bigWig signal p-value ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF450GSC, ENCFF902AOQ 132855343 ENCODE Processing Pipeline 974568775e2416116862e05236049098 https://www.encodeproject.org/files/ENCFF124DIY/@@download/ENCFF124DIY.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF996PHG bigWig signal p-value ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF034ZGA, ENCFF450GSC, ENCFF902AOQ 118418106 ENCODE Processing Pipeline 7818fe46c72d941a4573059f0dcec00d https://www.encodeproject.org/files/ENCFF996PHG/@@download/ENCFF996PHG.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF423LGE bed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF034ZGA, ENCFF902AOQ 4008844 ENCODE Processing Pipeline 2ea794c2e4e23e9d17c08f19ab942d6b https://www.encodeproject.org/files/ENCFF423LGE/@@download/ENCFF423LGE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF933OGO bigWig fold change over control ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF034ZGA, ENCFF902AOQ 131934563 ENCODE Processing Pipeline 03e5832acc2ddc44928bfbf9284779a3 https://www.encodeproject.org/files/ENCFF933OGO/@@download/ENCFF933OGO.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF524GRH bigBed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF579YOW 6545168 ENCODE Processing Pipeline e44d543d813a8fcfdbb2dbf007ddb520 https://www.encodeproject.org/files/ENCFF524GRH/@@download/ENCFF524GRH.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF042FFA bigBed narrowPeak peaks ENCSR000BGB ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF423LGE 9512388 ENCODE Processing Pipeline 9d873e2f6a4c98a9e4e4f6bd4ae521f0 https://www.encodeproject.org/files/ENCFF042FFA/@@download/ENCFF042FFA.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth extremely low read length ENCFF000PJM bam alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PJT 482798886 Richard Myers, HAIB 15ae45761932e215b37d9e82257f1b30 https://www.encodeproject.org/files/ENCFF000PJM/@@download/ENCFF000PJM.bam hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PJN bigBed broadPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UGG 706227 Richard Myers, HAIB b3f6bc73cac7a2ab8824cc71fc113e57 https://www.encodeproject.org/files/ENCFF000PJN/@@download/ENCFF000PJN.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PJO bigBed broadPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UGH 678002 Richard Myers, HAIB cb44ce64e05d02aec1e441b55355509f https://www.encodeproject.org/files/ENCFF000PJO/@@download/ENCFF000PJO.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PJP bam alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PJX 692271777 Richard Myers, HAIB a419984247d09a545647eacf4d4ddc71 https://www.encodeproject.org/files/ENCFF000PJP/@@download/ENCFF000PJP.bam hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PJR bigWig raw signal ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 1 17781411 Richard Myers, HAIB 5fa9eee0b050b3af1b699d14ed99d26d https://www.encodeproject.org/files/ENCFF000PJR/@@download/ENCFF000PJR.bigWig hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PJS bigWig raw signal ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 1 14559523 Richard Myers, HAIB 4970d1e9d6b3a3647a23130bdbdfce07 https://www.encodeproject.org/files/ENCFF000PJS/@@download/ENCFF000PJS.bigWig hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PJT fastq reads ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 352280469 Richard Myers, HAIB 7db8e124cceff5fc5b728fffa64a31ce https://www.encodeproject.org/files/ENCFF000PJT/@@download/ENCFF000PJT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PJX fastq reads ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 711507188 Richard Myers, HAIB 1c8074ce486b73d4825fc94f12bf0922 https://www.encodeproject.org/files/ENCFF000PJX/@@download/ENCFF000PJX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UGG bed broadPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 1 413698 Richard Myers, HAIB 63de7c204f862a449235cd0861ca4ca0 https://www.encodeproject.org/files/ENCFF001UGG/@@download/ENCFF001UGG.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UGH bed broadPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 1 384472 Richard Myers, HAIB a5e01f078393e61942391ce564ad094e https://www.encodeproject.org/files/ENCFF001UGH/@@download/ENCFF001UGH.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CKN bed narrowPeak optimal idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 407127 ENCODE Consortium Analysis Working Group a3fd51799799bc21f0c372816af6bda5 https://www.encodeproject.org/files/ENCFF002CKN/@@download/ENCFF002CKN.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF782WFL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE ENCFF002CKN 780150 ENCODE Consortium bbfabe8092191bd95b606e7857c5a1a8 https://www.encodeproject.org/files/ENCFF782WFL/@@download/ENCFF782WFL.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF392NEF bam unfiltered alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJT, ENCFF643CGH 440336222 ENCODE Processing Pipeline 9bd85e7da8b461c4bc553fd7deb0c7cf https://www.encodeproject.org/files/ENCFF392NEF/@@download/ENCFF392NEF.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF305JRI bam alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJT, ENCFF643CGH 193598114 ENCODE Processing Pipeline bc6b06a79ecc0c490c443577c6b5a3e9 https://www.encodeproject.org/files/ENCFF305JRI/@@download/ENCFF305JRI.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF578NKF bam alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJX, ENCFF643CGH 238609627 ENCODE Processing Pipeline f50949a2d3611c1fd23cad361869b7cf https://www.encodeproject.org/files/ENCFF578NKF/@@download/ENCFF578NKF.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF048IWW bam unfiltered alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJX, ENCFF643CGH 810273449 ENCODE Processing Pipeline 7c15016950e026b5e380c89ff6f0e748 https://www.encodeproject.org/files/ENCFF048IWW/@@download/ENCFF048IWW.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF926CAL bam unfiltered alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJT, ENCFF807MUK 439290517 ENCODE Processing Pipeline 3112355258dc0b10668107bfdb4b19ef https://www.encodeproject.org/files/ENCFF926CAL/@@download/ENCFF926CAL.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF479RIQ bam alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJT, ENCFF807MUK 193692144 ENCODE Processing Pipeline f79e7898b902fc85693051ab96274ca7 https://www.encodeproject.org/files/ENCFF479RIQ/@@download/ENCFF479RIQ.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF820JDU bam unfiltered alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJX, ENCFF807MUK 809139196 ENCODE Processing Pipeline 8283ad315ec49d42d14b03438288db94 https://www.encodeproject.org/files/ENCFF820JDU/@@download/ENCFF820JDU.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF802IIV bam alignments ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJX, ENCFF807MUK 238701190 ENCODE Processing Pipeline de8eaca80772100b5821d78fc450b09f https://www.encodeproject.org/files/ENCFF802IIV/@@download/ENCFF802IIV.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF131FBN bigWig signal p-value ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF305JRI, ENCFF578NKF, ENCFF943DZB 548468741 ENCODE Processing Pipeline 7bcd635f47676b5637781cf9aa00d4b4 https://www.encodeproject.org/files/ENCFF131FBN/@@download/ENCFF131FBN.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF175PGP bigWig fold change over control ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF305JRI, ENCFF943DZB 173912949 ENCODE Processing Pipeline 21ea6e9b46c2e81ca1df1cbc85624ee2 https://www.encodeproject.org/files/ENCFF175PGP/@@download/ENCFF175PGP.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF171FLI bed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF578NKF, ENCFF943DZB 2949299 ENCODE Processing Pipeline 42105d07f610f6e7fc1aa65bb7bd1906 https://www.encodeproject.org/files/ENCFF171FLI/@@download/ENCFF171FLI.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF083YPX bigBed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF659YMN 10659480 ENCODE Processing Pipeline 4d6dc9bf6df9e8d7a6d0e7feb231409e https://www.encodeproject.org/files/ENCFF083YPX/@@download/ENCFF083YPX.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF440ZDK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF072CXB 734377 ENCODE Processing Pipeline 2368328c62252703b877eceacbd9e7fd https://www.encodeproject.org/files/ENCFF440ZDK/@@download/ENCFF440ZDK.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF611EVM bigWig signal p-value ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF578NKF, ENCFF943DZB 507207369 ENCODE Processing Pipeline 1f437c5e7f8ec42e9044f1e5df17a775 https://www.encodeproject.org/files/ENCFF611EVM/@@download/ENCFF611EVM.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF967QFE bigWig signal p-value ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF305JRI, ENCFF943DZB 507740584 ENCODE Processing Pipeline c195a7b9b435b62b8b93f655558a8638 https://www.encodeproject.org/files/ENCFF967QFE/@@download/ENCFF967QFE.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF080FZD bigWig fold change over control ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF305JRI, ENCFF578NKF, ENCFF943DZB 321471499 ENCODE Processing Pipeline 4598ecf440d28209ea3a48a545c16882 https://www.encodeproject.org/files/ENCFF080FZD/@@download/ENCFF080FZD.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF659YMN bed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF305JRI, ENCFF578NKF, ENCFF943DZB 4918167 ENCODE Processing Pipeline df4a994a7a0fcd9b70d579a02cd30e49 https://www.encodeproject.org/files/ENCFF659YMN/@@download/ENCFF659YMN.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF163VVF bigBed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF489GZO 5140050 ENCODE Processing Pipeline 1a463f61c3ba7cec9dd7c5e99b34b9f1 https://www.encodeproject.org/files/ENCFF163VVF/@@download/ENCFF163VVF.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF516XHQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF468OUJ 711783 ENCODE Processing Pipeline 9fa425c410c63483b0421d401f58a3f1 https://www.encodeproject.org/files/ENCFF516XHQ/@@download/ENCFF516XHQ.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF245RYC bigWig fold change over control ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF578NKF, ENCFF943DZB 194166742 ENCODE Processing Pipeline e50350b0b1468646fee690443359fa29 https://www.encodeproject.org/files/ENCFF245RYC/@@download/ENCFF245RYC.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF489GZO bed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF305JRI, ENCFF943DZB 2696330 ENCODE Processing Pipeline 7353b54bdc04da777baaf93b5087e9c0 https://www.encodeproject.org/files/ENCFF489GZO/@@download/ENCFF489GZO.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF852VIM bigBed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF171FLI 6813040 ENCODE Processing Pipeline 8cc256776c00e39167a538a893d832c0 https://www.encodeproject.org/files/ENCFF852VIM/@@download/ENCFF852VIM.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF072CXB bed narrowPeak optimal idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF171FLI, ENCFF419RSJ, ENCFF489GZO, ENCFF659YMN 382704 ENCODE Processing Pipeline abfd3e66464073f9e2987a0b76a4c3a3 https://www.encodeproject.org/files/ENCFF072CXB/@@download/ENCFF072CXB.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF468OUJ bed narrowPeak conservative idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF171FLI, ENCFF419RSJ, ENCFF489GZO, ENCFF659YMN 366218 ENCODE Processing Pipeline 48860a0395dc84b8db68658d076f4da1 https://www.encodeproject.org/files/ENCFF468OUJ/@@download/ENCFF468OUJ.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF632XBG bigWig signal p-value ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF346RZT, ENCFF479RIQ 505336661 ENCODE Processing Pipeline 41729d0e25f76dbf1d418aeca85e11e5 https://www.encodeproject.org/files/ENCFF632XBG/@@download/ENCFF632XBG.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF430AUL bigWig fold change over control ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF802IIV 192157124 ENCODE Processing Pipeline 9b5e7ebbe88e3d1ef9ec8427af8f9a02 https://www.encodeproject.org/files/ENCFF430AUL/@@download/ENCFF430AUL.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF167THE bed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF802IIV 2949066 ENCODE Processing Pipeline 7dc33457c7ce90d2589689d9fea3e183 https://www.encodeproject.org/files/ENCFF167THE/@@download/ENCFF167THE.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF277KXQ bed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF346RZT, ENCFF479RIQ 2869150 ENCODE Processing Pipeline 9d8580ba0249475bc978a9694b61ede8 https://www.encodeproject.org/files/ENCFF277KXQ/@@download/ENCFF277KXQ.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF222YCT bed narrowPeak conservative idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF167THE, ENCFF176XYE, ENCFF277KXQ 365775 ENCODE Processing Pipeline 8b9088fe5f495234626b161730cc0af8 https://www.encodeproject.org/files/ENCFF222YCT/@@download/ENCFF222YCT.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF345KCU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF222YCT 710832 ENCODE Processing Pipeline 87fad6d1fbe13f862d128eea2910dd20 https://www.encodeproject.org/files/ENCFF345KCU/@@download/ENCFF345KCU.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF736DUU bigBed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF277KXQ 6466688 ENCODE Processing Pipeline 729d5351e61f75a78d04e55f1c8d89b0 https://www.encodeproject.org/files/ENCFF736DUU/@@download/ENCFF736DUU.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF501NMH bigWig fold change over control ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF346RZT, ENCFF479RIQ 174605206 ENCODE Processing Pipeline 7030a527ba710df747720f796a8d4f0c https://www.encodeproject.org/files/ENCFF501NMH/@@download/ENCFF501NMH.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF538XRT bigWig signal p-value ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF802IIV 571880247 ENCODE Processing Pipeline bbdbdfa46e60297f063700ddd488d4e3 https://www.encodeproject.org/files/ENCFF538XRT/@@download/ENCFF538XRT.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF570QAY bigWig signal p-value ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF346RZT, ENCFF479RIQ, ENCFF802IIV 631401003 ENCODE Processing Pipeline fb430a778443ab225a8eb68c0f47da6a https://www.encodeproject.org/files/ENCFF570QAY/@@download/ENCFF570QAY.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF267OJD bigWig fold change over control ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF346RZT, ENCFF479RIQ, ENCFF802IIV 319805263 ENCODE Processing Pipeline 4e93a3fef82a5cf2692e5f8ebdb624fa https://www.encodeproject.org/files/ENCFF267OJD/@@download/ENCFF267OJD.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF346RDI bigBed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF176XYE 10660799 ENCODE Processing Pipeline 3a4292ffa862ae5951d48d2da570890d https://www.encodeproject.org/files/ENCFF346RDI/@@download/ENCFF346RDI.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF176XYE bed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF346RZT, ENCFF479RIQ, ENCFF802IIV 4919862 ENCODE Processing Pipeline 00d8106a196244360e77271c9b31d5dc https://www.encodeproject.org/files/ENCFF176XYE/@@download/ENCFF176XYE.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF663PBQ bigBed narrowPeak peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 2 ENCFF167THE 6815423 ENCODE Processing Pipeline c554983eb4bd542d62e78238350153b6 https://www.encodeproject.org/files/ENCFF663PBQ/@@download/ENCFF663PBQ.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF884JKW bed narrowPeak optimal idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF167THE, ENCFF176XYE, ENCFF277KXQ 382258 ENCODE Processing Pipeline b34f82ba92cb34b320e67f0328816c72 https://www.encodeproject.org/files/ENCFF884JKW/@@download/ENCFF884JKW.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF629SNR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4A-human ENCAB000AHP DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF884JKW 733967 ENCODE Processing Pipeline 7c7f15aeed1a9624c2aa40e810ec8b71 https://www.encodeproject.org/files/ENCFF629SNR/@@download/ENCFF629SNR.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NMV bam alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NNB 455086473 Richard Myers, HAIB 565fd85bd7e5ea5ff54857cef4235c01 https://www.encodeproject.org/files/ENCFF000NMV/@@download/ENCFF000NMV.bam hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NMW bigBed broadPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TUZ 291471 Richard Myers, HAIB 04bda01c932af96599ceb4f6b87b7ed9 https://www.encodeproject.org/files/ENCFF000NMW/@@download/ENCFF000NMW.bigBed hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NMX bigBed broadPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TVA 224507 Richard Myers, HAIB 078786077127ae66ace910c9eb9bfdaf https://www.encodeproject.org/files/ENCFF000NMX/@@download/ENCFF000NMX.bigBed hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NMY bam alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NNF 838597533 Richard Myers, HAIB 4c1a137c8b937ca6ad2827251f580f34 https://www.encodeproject.org/files/ENCFF000NMY/@@download/ENCFF000NMY.bam hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NMZ bigWig raw signal ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 5845826 Richard Myers, HAIB 3015fed0ff522bce6483c67edf663863 https://www.encodeproject.org/files/ENCFF000NMZ/@@download/ENCFF000NMZ.bigWig hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NNA bigWig raw signal ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 17604341 Richard Myers, HAIB 6d4c104a9e6964fadc88b5c5d29d528e https://www.encodeproject.org/files/ENCFF000NNA/@@download/ENCFF000NNA.bigWig hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NNB fastq reads ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 536913730 Richard Myers, HAIB 9a947031fd6d1418018aaa0f2c8f5833 https://www.encodeproject.org/files/ENCFF000NNB/@@download/ENCFF000NNB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NNM/ released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NNF fastq reads ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1284725117 Richard Myers, HAIB 261671c80d9ffaaffa7630f091ebd3b9 https://www.encodeproject.org/files/ENCFF000NNF/@@download/ENCFF000NNF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NNN/ released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF001TUZ bed broadPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 119833 Richard Myers, HAIB 1bb18584595667a909007587fe70364e https://www.encodeproject.org/files/ENCFF001TUZ/@@download/ENCFF001TUZ.bed.gz hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001TVA bed broadPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 110539 Richard Myers, HAIB 55d2313ae2cdb411f7dd2a2dc44c5bf2 https://www.encodeproject.org/files/ENCFF001TVA/@@download/ENCFF001TVA.bed.gz hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CGM bed narrowPeak optimal idr thresholded peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 216224 ENCODE Consortium Analysis Working Group 37fb51b44639c4bd578d332ce6d50cbc https://www.encodeproject.org/files/ENCFF002CGM/@@download/ENCFF002CGM.bed.gz hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF561MMK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE ENCFF002CGM 570534 ENCODE Consortium 39ce4c75cf4549676b9b2046642048e6 https://www.encodeproject.org/files/ENCFF561MMK/@@download/ENCFF561MMK.bigBed hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF755GJA bam alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NNB, ENCFF643CGH 424117995 ENCODE Processing Pipeline 5b1cab4882d1fa625aecd5ed8debac49 https://www.encodeproject.org/files/ENCFF755GJA/@@download/ENCFF755GJA.bam GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF968HPB bam unfiltered alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NNB, ENCFF643CGH 699150745 ENCODE Processing Pipeline 09635ec910630f1407c03ba8b8e5a725 https://www.encodeproject.org/files/ENCFF968HPB/@@download/ENCFF968HPB.bam GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF788WDL bam unfiltered alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NNF, ENCFF643CGH 1523895753 ENCODE Processing Pipeline 95f40dd1af787cfe1f0f8a46fd1ee8c8 https://www.encodeproject.org/files/ENCFF788WDL/@@download/ENCFF788WDL.bam GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF527JSO bam alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NNF, ENCFF643CGH 553184307 ENCODE Processing Pipeline e641cda16e29bc50c3c4a6fe19e3ee53 https://www.encodeproject.org/files/ENCFF527JSO/@@download/ENCFF527JSO.bam GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF665XOJ bam alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NNB, ENCFF807MUK 424502908 ENCODE Processing Pipeline 2ab44fe99bf1e8a97552d78ad2a4c389 https://www.encodeproject.org/files/ENCFF665XOJ/@@download/ENCFF665XOJ.bam hg19 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF237UBZ bam unfiltered alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NNB, ENCFF807MUK 697081127 ENCODE Processing Pipeline 326cc581555c558947f1d2a37124f348 https://www.encodeproject.org/files/ENCFF237UBZ/@@download/ENCFF237UBZ.bam hg19 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF790CVQ bam unfiltered alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NNF, ENCFF807MUK 1519565633 ENCODE Processing Pipeline fb6a35621adc3455ed8753b01ad35b05 https://www.encodeproject.org/files/ENCFF790CVQ/@@download/ENCFF790CVQ.bam hg19 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF033CIS bam alignments ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NNF, ENCFF807MUK 553613500 ENCODE Processing Pipeline 4bcce1957dc6bb6a1cdb778ce7d8ce87 https://www.encodeproject.org/files/ENCFF033CIS/@@download/ENCFF033CIS.bam hg19 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF343VQA bigWig signal p-value ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF755GJA, ENCFF942JER 225205278 ENCODE Processing Pipeline d2825f15aa78e4df8b2c743724ec1bec https://www.encodeproject.org/files/ENCFF343VQA/@@download/ENCFF343VQA.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF904ZBR bigWig signal p-value ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF428QRM, ENCFF527JSO 350099448 ENCODE Processing Pipeline c9732cdcb0b18fc85b79f8055dcffa5e https://www.encodeproject.org/files/ENCFF904ZBR/@@download/ENCFF904ZBR.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF894HFP bigWig fold change over control ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF428QRM, ENCFF527JSO, ENCFF755GJA, ENCFF942JER 422363827 ENCODE Processing Pipeline 7536467520df97f4143c6523550f1afd https://www.encodeproject.org/files/ENCFF894HFP/@@download/ENCFF894HFP.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF189NZN bigWig fold change over control ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF428QRM, ENCFF527JSO 207647304 ENCODE Processing Pipeline 3ec43f250dbd64e7a96f23c5d90553c7 https://www.encodeproject.org/files/ENCFF189NZN/@@download/ENCFF189NZN.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF597WUW bigWig signal p-value ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF428QRM, ENCFF527JSO, ENCFF755GJA, ENCFF942JER 525048203 ENCODE Processing Pipeline bcb496dd8fe785b8b94fccb5152bcb13 https://www.encodeproject.org/files/ENCFF597WUW/@@download/ENCFF597WUW.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF155EOT bigWig fold change over control ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF755GJA, ENCFF942JER 159662498 ENCODE Processing Pipeline e3cf33f703f536d01d6eba8069f6f6d3 https://www.encodeproject.org/files/ENCFF155EOT/@@download/ENCFF155EOT.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF433YOB bigBed narrowPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF435YKA 7559164 ENCODE Processing Pipeline d4f338e824d205ea8a04946edfd8a54c https://www.encodeproject.org/files/ENCFF433YOB/@@download/ENCFF433YOB.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF723BZV bed narrowPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF755GJA, ENCFF942JER 3095614 ENCODE Processing Pipeline cc487b4cceae393151004eaee17cdc12 https://www.encodeproject.org/files/ENCFF723BZV/@@download/ENCFF723BZV.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF937VQZ bed narrowPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF428QRM, ENCFF527JSO, ENCFF755GJA, ENCFF942JER 4772270 ENCODE Processing Pipeline db52a8325f5a83b6c8a56d779b178742 https://www.encodeproject.org/files/ENCFF937VQZ/@@download/ENCFF937VQZ.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF933BJO bigBed narrowPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF723BZV 6192847 ENCODE Processing Pipeline 9e9ca0f6f90ded5075b714af1efc49c0 https://www.encodeproject.org/files/ENCFF933BJO/@@download/ENCFF933BJO.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF648ULE bed narrowPeak conservative idr thresholded peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF435YKA, ENCFF723BZV, ENCFF937VQZ 168749 ENCODE Processing Pipeline 29fe6af81e55b8a3b82a99c0af63c1a7 https://www.encodeproject.org/files/ENCFF648ULE/@@download/ENCFF648ULE.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF156BXS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF648ULE 368487 ENCODE Processing Pipeline f58a984c8d510f749d6984c50ae66569 https://www.encodeproject.org/files/ENCFF156BXS/@@download/ENCFF156BXS.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF435YKA bed narrowPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF428QRM, ENCFF527JSO 3789703 ENCODE Processing Pipeline 4e46e1ed1fabb14376589b152bbe5d50 https://www.encodeproject.org/files/ENCFF435YKA/@@download/ENCFF435YKA.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF738PEI bigBed narrowPeak peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF937VQZ 11039067 ENCODE Processing Pipeline 36ee894ae33866d59c043c4fa9814580 https://www.encodeproject.org/files/ENCFF738PEI/@@download/ENCFF738PEI.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF293OHT bed narrowPeak optimal idr thresholded peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF435YKA, ENCFF723BZV, ENCFF937VQZ 202098 ENCODE Processing Pipeline e27fd5b69bc046854d08409bfffda5f1 https://www.encodeproject.org/files/ENCFF293OHT/@@download/ENCFF293OHT.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF319HVM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJC ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF293OHT 421562 ENCODE Processing Pipeline af09d65698b5eee091bcf4ceaa2946ec https://www.encodeproject.org/files/ENCFF319HVM/@@download/ENCFF319HVM.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NSJ bam alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NSW 856756292 Richard Myers, HAIB 0e6303469c9cb86a61f1814c21c69cb9 https://www.encodeproject.org/files/ENCFF000NSJ/@@download/ENCFF000NSJ.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NSK bigBed broadPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TWF 712596 Richard Myers, HAIB 9fcc7f70564a6956f3376514a69e05b0 https://www.encodeproject.org/files/ENCFF000NSK/@@download/ENCFF000NSK.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NSL bigBed broadPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TWG 1157078 Richard Myers, HAIB d883e03bdd98233a782858ad2785cf74 https://www.encodeproject.org/files/ENCFF000NSL/@@download/ENCFF000NSL.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NSM bigWig raw signal ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 1 19614342 Richard Myers, HAIB f090249f8c1ffb65a4c6cdddd5482bfa https://www.encodeproject.org/files/ENCFF000NSM/@@download/ENCFF000NSM.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NSN bam alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NSX 871125644 Richard Myers, HAIB 003671b1058149cc2c347dd76cf0d507 https://www.encodeproject.org/files/ENCFF000NSN/@@download/ENCFF000NSN.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NSO bigWig raw signal ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 1 39327505 Richard Myers, HAIB b85aafd949adcd13e3b657c9be536e46 https://www.encodeproject.org/files/ENCFF000NSO/@@download/ENCFF000NSO.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NSW fastq reads ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 951134552 Richard Myers, HAIB aa65d657885a4390d0961e257e000436 https://www.encodeproject.org/files/ENCFF000NSW/@@download/ENCFF000NSW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth biological replicates with identical biosample ENCFF000NSX fastq reads ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 912657521 Richard Myers, HAIB 28f58f2b113e59626753f7a07a8bc0b6 https://www.encodeproject.org/files/ENCFF000NSX/@@download/ENCFF000NSX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, low read depth biological replicates with identical biosample ENCFF001TWF bed broadPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 1 411017 Richard Myers, HAIB 8e4f07fd87143796afe22dfe4fa1c5b6 https://www.encodeproject.org/files/ENCFF001TWF/@@download/ENCFF001TWF.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TWG bed broadPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 1 792885 Richard Myers, HAIB 2a2ffa9b8b813c4a95c5d47c1a803c7b https://www.encodeproject.org/files/ENCFF001TWG/@@download/ENCFF001TWG.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CGQ bed narrowPeak optimal idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 633359 ENCODE Consortium Analysis Working Group 68eab32a1070bca1a8bc5e9eb96f6c47 https://www.encodeproject.org/files/ENCFF002CGQ/@@download/ENCFF002CGQ.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF036BDQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE ENCFF002CGQ 1410042 ENCODE Consortium 167b0284f66d5448c55a705f1fc723fe https://www.encodeproject.org/files/ENCFF036BDQ/@@download/ENCFF036BDQ.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF183OSG bam unfiltered alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NSX, ENCFF643CGH 1136594916 ENCODE Processing Pipeline e7368e978b9f9c95e7977542a27b7670 https://www.encodeproject.org/files/ENCFF183OSG/@@download/ENCFF183OSG.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF452LSN bam unfiltered alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NSW, ENCFF643CGH 1186766493 ENCODE Processing Pipeline a36550270d5987883a7e19dc8b851659 https://www.encodeproject.org/files/ENCFF452LSN/@@download/ENCFF452LSN.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF399QIP bam alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NSW, ENCFF643CGH 658647063 ENCODE Processing Pipeline 135436e87a5aa6285088d57b82206646 https://www.encodeproject.org/files/ENCFF399QIP/@@download/ENCFF399QIP.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF802IZN bam alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NSX, ENCFF643CGH 687522694 ENCODE Processing Pipeline 572749ec1845e9028802b150709feda2 https://www.encodeproject.org/files/ENCFF802IZN/@@download/ENCFF802IZN.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF346GCD bam unfiltered alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NSX, ENCFF807MUK 1134228888 ENCODE Processing Pipeline 4b18d264a85c37566fefbb75be7762bd https://www.encodeproject.org/files/ENCFF346GCD/@@download/ENCFF346GCD.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF558RVJ bam alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NSW, ENCFF807MUK 656607627 ENCODE Processing Pipeline 78aed600470dfaaf2da03c5bd17ff916 https://www.encodeproject.org/files/ENCFF558RVJ/@@download/ENCFF558RVJ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF137FZZ bam unfiltered alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NSW, ENCFF807MUK 1182834623 ENCODE Processing Pipeline e680cc531d101df5c14bd93daeb2c052 https://www.encodeproject.org/files/ENCFF137FZZ/@@download/ENCFF137FZZ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF850VBC bam alignments ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NSX, ENCFF807MUK 683256234 ENCODE Processing Pipeline 2130a5993e4305023eab6958de843e31 https://www.encodeproject.org/files/ENCFF850VBC/@@download/ENCFF850VBC.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF776NQC bigWig signal p-value ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF399QIP, ENCFF562HPN 456016343 ENCODE Processing Pipeline f9173d1c59d666d0cb48dec6262ecdaf https://www.encodeproject.org/files/ENCFF776NQC/@@download/ENCFF776NQC.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF657GHU bigWig signal p-value ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF399QIP, ENCFF438FFV, ENCFF562HPN, ENCFF802IZN 889982687 ENCODE Processing Pipeline 4d5d2d9c767896386e71688dca3dd2a1 https://www.encodeproject.org/files/ENCFF657GHU/@@download/ENCFF657GHU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF704LSN bed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF399QIP, ENCFF562HPN 4267001 ENCODE Processing Pipeline 092e74773a8c490e7463fd4674149e0f https://www.encodeproject.org/files/ENCFF704LSN/@@download/ENCFF704LSN.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF735ZXJ bigWig fold change over control ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF802IZN 287193147 ENCODE Processing Pipeline 0afd7d790feb367354a7ff3405d9aae5 https://www.encodeproject.org/files/ENCFF735ZXJ/@@download/ENCFF735ZXJ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF770KXF bigWig signal p-value ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF802IZN 468123584 ENCODE Processing Pipeline 5e344ceb5b2f870470476d207bcbe8a4 https://www.encodeproject.org/files/ENCFF770KXF/@@download/ENCFF770KXF.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF832YIE bed narrowPeak optimal idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF023JPV, ENCFF419RSJ, ENCFF471DNC, ENCFF704LSN 619153 ENCODE Processing Pipeline 8e4e292da42747043d1e759f09645b96 https://www.encodeproject.org/files/ENCFF832YIE/@@download/ENCFF832YIE.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF765RYV bigBed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF471DNC 11554051 ENCODE Processing Pipeline adba2b529e6942c2224036f55446b8f0 https://www.encodeproject.org/files/ENCFF765RYV/@@download/ENCFF765RYV.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF388SRU bigWig fold change over control ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF399QIP, ENCFF562HPN 290725176 ENCODE Processing Pipeline e1e48cdf02d3c9c83b9d97fa48790f1d https://www.encodeproject.org/files/ENCFF388SRU/@@download/ENCFF388SRU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF424MMT bigWig fold change over control ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF399QIP, ENCFF438FFV, ENCFF562HPN, ENCFF802IZN 664584043 ENCODE Processing Pipeline 4f8b3d577b3e716b0c21dba8b985e502 https://www.encodeproject.org/files/ENCFF424MMT/@@download/ENCFF424MMT.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF023JPV bed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF802IZN 4688816 ENCODE Processing Pipeline 9f61169c23ba2f724a9b68b23b221d68 https://www.encodeproject.org/files/ENCFF023JPV/@@download/ENCFF023JPV.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF471DNC bed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF399QIP, ENCFF438FFV, ENCFF562HPN, ENCFF802IZN 5835967 ENCODE Processing Pipeline 08d66c598d22ecdea53984cd187de849 https://www.encodeproject.org/files/ENCFF471DNC/@@download/ENCFF471DNC.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF013CGK bigBed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF704LSN 10483279 ENCODE Processing Pipeline 2526d2d73ae041b3cbc7f7b0333eff3c https://www.encodeproject.org/files/ENCFF013CGK/@@download/ENCFF013CGK.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF045MGV bigBed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF023JPV 10379242 ENCODE Processing Pipeline 1e7677739dc57d01a932f18018a47989 https://www.encodeproject.org/files/ENCFF045MGV/@@download/ENCFF045MGV.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF826VTK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF832YIE 1113988 ENCODE Processing Pipeline bdaeea4956076624557300bb3381eede https://www.encodeproject.org/files/ENCFF826VTK/@@download/ENCFF826VTK.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF142FZS bed narrowPeak conservative idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF023JPV, ENCFF419RSJ, ENCFF471DNC, ENCFF704LSN 503964 ENCODE Processing Pipeline 6df3b72bb3ef2038546f06c30cb8b0b2 https://www.encodeproject.org/files/ENCFF142FZS/@@download/ENCFF142FZS.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF795UAN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF142FZS 959140 ENCODE Processing Pipeline d0a76d7c73f1e0f84b7e29ecb8065e28 https://www.encodeproject.org/files/ENCFF795UAN/@@download/ENCFF795UAN.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF926YBS bigWig signal p-value ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF558RVJ, ENCFF837IOW, ENCFF850VBC, ENCFF958RTR 956195863 ENCODE Processing Pipeline 7f728ba7c02fa68b585b9f1d78b700c9 https://www.encodeproject.org/files/ENCFF926YBS/@@download/ENCFF926YBS.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF331PAU bigWig signal p-value ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF837IOW, ENCFF850VBC 494833557 ENCODE Processing Pipeline 349de97b63d8a43dfd24c570dd096413 https://www.encodeproject.org/files/ENCFF331PAU/@@download/ENCFF331PAU.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF413PZT bigWig fold change over control ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF558RVJ, ENCFF837IOW, ENCFF850VBC, ENCFF958RTR 665527096 ENCODE Processing Pipeline 9784b13df9bc89fc31127da11aa0371d https://www.encodeproject.org/files/ENCFF413PZT/@@download/ENCFF413PZT.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF575XSY bigWig signal p-value ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF558RVJ, ENCFF958RTR 420592386 ENCODE Processing Pipeline 14a6f810e838160ccb509cba66a57fea https://www.encodeproject.org/files/ENCFF575XSY/@@download/ENCFF575XSY.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF810WXY bigWig fold change over control ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF558RVJ, ENCFF958RTR 289687774 ENCODE Processing Pipeline f25391bb8be2e9bfb4463b3ba1b02339 https://www.encodeproject.org/files/ENCFF810WXY/@@download/ENCFF810WXY.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF482FJT bed narrowPeak conservative idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF078EBJ, ENCFF521MBW, ENCFF887VZZ 477696 ENCODE Processing Pipeline ab16892958a2724272194ef04bcd92f5 https://www.encodeproject.org/files/ENCFF482FJT/@@download/ENCFF482FJT.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF936ACZ bigWig fold change over control ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF837IOW, ENCFF850VBC 285083863 ENCODE Processing Pipeline ed29e1615a41ce65795f58402742b0cd https://www.encodeproject.org/files/ENCFF936ACZ/@@download/ENCFF936ACZ.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF521MBW bed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF558RVJ, ENCFF837IOW, ENCFF850VBC, ENCFF958RTR 5582668 ENCODE Processing Pipeline 8f717351d62201bcf8422ba48029426f https://www.encodeproject.org/files/ENCFF521MBW/@@download/ENCFF521MBW.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF887VZZ bed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF558RVJ, ENCFF958RTR 4256624 ENCODE Processing Pipeline 233a9430984404d152bb5e70c69c3bc6 https://www.encodeproject.org/files/ENCFF887VZZ/@@download/ENCFF887VZZ.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF583ZPC bigBed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF078EBJ 10410685 ENCODE Processing Pipeline 675ac4208d4ca3dd6a8a0cbba9333543 https://www.encodeproject.org/files/ENCFF583ZPC/@@download/ENCFF583ZPC.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF593FBF bed narrowPeak optimal idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF078EBJ, ENCFF521MBW, ENCFF887VZZ 573169 ENCODE Processing Pipeline 40e640037d380cec9194af33adafd71e https://www.encodeproject.org/files/ENCFF593FBF/@@download/ENCFF593FBF.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF078EBJ bed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 2 ENCFF837IOW, ENCFF850VBC 4712048 ENCODE Processing Pipeline cb1dad2c3fc0d5a95c7389785e59fc44 https://www.encodeproject.org/files/ENCFF078EBJ/@@download/ENCFF078EBJ.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF751UIH bigBed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1 ENCFF887VZZ 10468347 ENCODE Processing Pipeline 07c19121886f3b286d82961dcad8f127 https://www.encodeproject.org/files/ENCFF751UIH/@@download/ENCFF751UIH.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF680OYH bigBed narrowPeak peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF521MBW 11265995 ENCODE Processing Pipeline 8f13152cf32e50c64987f88cbcbc328f https://www.encodeproject.org/files/ENCFF680OYH/@@download/ENCFF680OYH.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF243MVH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF482FJT 912514 ENCODE Processing Pipeline 9625995a648b711178fc4b617659ae01 https://www.encodeproject.org/files/ENCFF243MVH/@@download/ENCFF243MVH.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF644RJO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGT ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BATF-human ENCAB000AED DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF593FBF 1037564 ENCODE Processing Pipeline 0888e67e824c579a33a8ce20aa14c894 https://www.encodeproject.org/files/ENCFF644RJO/@@download/ENCFF644RJO.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF956IEA fastq reads ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF836HTT 2246658550 Richard Myers, HAIB 7a82f83c36cf2884b8b21467dbf047f4 SRA:SRR6213061 https://www.encodeproject.org/files/ENCFF956IEA/@@download/ENCFF956IEA.fastq.gz HiSeq 2000 /files/ENCFF803CYD/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF836HTT fastq reads ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF956IEA 2350070508 Richard Myers, HAIB a8a188aa15feba0a1727ab3279ac447e SRA:SRR6213061 https://www.encodeproject.org/files/ENCFF836HTT/@@download/ENCFF836HTT.fastq.gz HiSeq 2000 /files/ENCFF180WPD/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF540TEB bam alignments ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF807MUK, ENCFF836HTT, ENCFF956IEA 3945092638 ENCODE Processing Pipeline 823d7b1ef64b7d99c98c980b6e5e964b https://www.encodeproject.org/files/ENCFF540TEB/@@download/ENCFF540TEB.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF003ZEM bam unfiltered alignments ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF807MUK, ENCFF836HTT, ENCFF956IEA 5513354603 ENCODE Processing Pipeline c8bb4ea5cb0ba0ffb382013636f8829f https://www.encodeproject.org/files/ENCFF003ZEM/@@download/ENCFF003ZEM.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF940CLF bam unfiltered alignments ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF836HTT, ENCFF956IEA 5542390763 ENCODE Processing Pipeline 9f3fc86853eb25164b08f74c9b18c3bc https://www.encodeproject.org/files/ENCFF940CLF/@@download/ENCFF940CLF.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF647USM bam alignments ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF836HTT, ENCFF956IEA 3950023917 ENCODE Processing Pipeline 100896793c3c42f58e57ea9aaf8b70d4 https://www.encodeproject.org/files/ENCFF647USM/@@download/ENCFF647USM.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF406PWQ bigWig signal p-value ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF647USM 1564328202 ENCODE Processing Pipeline a549cf4895ca3a2d6cf1e59ea259086d https://www.encodeproject.org/files/ENCFF406PWQ/@@download/ENCFF406PWQ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF384VWO bigWig fold change over control ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF647USM 1472421603 ENCODE Processing Pipeline 88f590e4919f9c9d62aa692c5cc283e6 https://www.encodeproject.org/files/ENCFF384VWO/@@download/ENCFF384VWO.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF906VTL bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF274MOA, ENCFF419RSJ 503 ENCODE Processing Pipeline 48802e8c273c16d75d6e39b284721fe4 https://www.encodeproject.org/files/ENCFF906VTL/@@download/ENCFF906VTL.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF274MOA bed narrowPeak peaks ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF647USM 5798400 ENCODE Processing Pipeline 6e593794c770ef929bd1fbe9d5d11f9c https://www.encodeproject.org/files/ENCFF274MOA/@@download/ENCFF274MOA.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF568FAS bigBed narrowPeak peaks ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF274MOA 10783989 ENCODE Processing Pipeline fea5758ca5e15926b05b72c05aec36b4 https://www.encodeproject.org/files/ENCFF568FAS/@@download/ENCFF568FAS.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF202ADI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF906VTL 22188 ENCODE Processing Pipeline f5de9196bdd74896097b00d4321fc81b https://www.encodeproject.org/files/ENCFF202ADI/@@download/ENCFF202ADI.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF993FLG bigWig signal p-value ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF540TEB 1547110863 ENCODE Processing Pipeline 8020794fe4eae914a657def0769e0045 https://www.encodeproject.org/files/ENCFF993FLG/@@download/ENCFF993FLG.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF647SXX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF037OER 1040 ENCODE Processing Pipeline 9c92fb93a075b3a51b07a266b04b6c57 https://www.encodeproject.org/files/ENCFF647SXX/@@download/ENCFF647SXX.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF638AYW bigWig fold change over control ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF540TEB 1473238750 ENCODE Processing Pipeline c9079b29b7bcc1717c35f02c92a9d1c9 https://www.encodeproject.org/files/ENCFF638AYW/@@download/ENCFF638AYW.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF037OER bed narrowPeak peaks ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF540TEB 6381640 ENCODE Processing Pipeline 7d9497f3a57f423bbea4e87875962eb8 https://www.encodeproject.org/files/ENCFF037OER/@@download/ENCFF037OER.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF897LRG bigBed narrowPeak peaks ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF037OER 11496059 ENCODE Processing Pipeline b3c63a52de549ad4674936a89e66be3f https://www.encodeproject.org/files/ENCFF897LRG/@@download/ENCFF897LRG.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF094OEE bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR501LEH ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF647SXX 76709 ENCODE Processing Pipeline 6822e9132f28da0fe678a6a349d7d256 https://www.encodeproject.org/files/ENCFF094OEE/@@download/ENCFF094OEE.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF000QKT bigBed broadPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UMH 301144 Richard Myers, HAIB f9c0c691ca1929e1b70b49df49f57058 https://www.encodeproject.org/files/ENCFF000QKT/@@download/ENCFF000QKT.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QKU bigBed broadPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UMI 1079521 Richard Myers, HAIB 2d16d19815f72cd9ea86359999de984b https://www.encodeproject.org/files/ENCFF000QKU/@@download/ENCFF000QKU.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QKV bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QLC 670606460 Richard Myers, HAIB 1b1bd63f5fc1052f9e1b4b19050bb6d3 https://www.encodeproject.org/files/ENCFF000QKV/@@download/ENCFF000QKV.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QKW bigWig raw signal ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 1 9308814 Richard Myers, HAIB e8178129a0d723472ae065af4c254b3d https://www.encodeproject.org/files/ENCFF000QKW/@@download/ENCFF000QKW.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QKX bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QLG 1070912704 Richard Myers, HAIB 5930d9f7f2c09d87f602a9e5145fed98 https://www.encodeproject.org/files/ENCFF000QKX/@@download/ENCFF000QKX.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QKY bigWig raw signal ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 1 50131825 Richard Myers, HAIB e9c027b21778c68cf5a2789013bf6af5 https://www.encodeproject.org/files/ENCFF000QKY/@@download/ENCFF000QKY.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QLC fastq reads ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 618832603 Richard Myers, HAIB 1d9bf5b6afbe57efc07f5808ba038f82 https://www.encodeproject.org/files/ENCFF000QLC/@@download/ENCFF000QLC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QLG fastq reads ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1112162617 Richard Myers, HAIB 279b1cc74435f5272963dad002aa47bf https://www.encodeproject.org/files/ENCFF000QLG/@@download/ENCFF000QLG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF001UMH bed broadPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 1 152029 Richard Myers, HAIB a638098859d8abb82f51742a716f29d7 https://www.encodeproject.org/files/ENCFF001UMH/@@download/ENCFF001UMH.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF001UMI bed broadPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 1 603742 Richard Myers, HAIB d3ee2bb1e8d1e70d5ce927e6acd95d20 https://www.encodeproject.org/files/ENCFF001UMI/@@download/ENCFF001UMI.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CMZ bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 441449 ENCODE Consortium Analysis Working Group f57e8302a733b1d28d1d8fc097de34cd https://www.encodeproject.org/files/ENCFF002CMZ/@@download/ENCFF002CMZ.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF378XCF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE ENCFF002CMZ 1104926 ENCODE Consortium 7125335bb7ee2dcb1332322a615111e1 https://www.encodeproject.org/files/ENCFF378XCF/@@download/ENCFF378XCF.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF927KAH bam unfiltered alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QLC, ENCFF807MUK 820027638 ENCODE Processing Pipeline 212c1ec8961049cb70e90b9c3f12fe3b https://www.encodeproject.org/files/ENCFF927KAH/@@download/ENCFF927KAH.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF859KGS bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QLC, ENCFF807MUK 438697653 ENCODE Processing Pipeline 54d59877e85df1a35f7d0ec4cf6f02a9 https://www.encodeproject.org/files/ENCFF859KGS/@@download/ENCFF859KGS.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF642RRS bam unfiltered alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QLG, ENCFF807MUK 1379183545 ENCODE Processing Pipeline c8e2a66cc0e811602b8735d340b65eb0 https://www.encodeproject.org/files/ENCFF642RRS/@@download/ENCFF642RRS.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF920CCJ bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QLG, ENCFF807MUK 691782077 ENCODE Processing Pipeline e311fa3ed5ebfe8934071940a176d24a https://www.encodeproject.org/files/ENCFF920CCJ/@@download/ENCFF920CCJ.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF919LAP bam unfiltered alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QLC, ENCFF643CGH 821713349 ENCODE Processing Pipeline efa894d63021eb9bdf3046540d6dab75 https://www.encodeproject.org/files/ENCFF919LAP/@@download/ENCFF919LAP.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF784SCN bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QLC, ENCFF643CGH 438447819 ENCODE Processing Pipeline b5973d93299d0c5813c759b060824952 https://www.encodeproject.org/files/ENCFF784SCN/@@download/ENCFF784SCN.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF203KTA bam unfiltered alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QLG, ENCFF643CGH 1380732916 ENCODE Processing Pipeline ce22ff256f8ea55d7fa2c44d2ea6df3a https://www.encodeproject.org/files/ENCFF203KTA/@@download/ENCFF203KTA.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF778PDI bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QLG, ENCFF643CGH 691292650 ENCODE Processing Pipeline e8964b8c48ed513a5bedcad1b6f8772c https://www.encodeproject.org/files/ENCFF778PDI/@@download/ENCFF778PDI.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF123NAN bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF101JWH 12717810 ENCODE Processing Pipeline 387037b87cf9bcbaa9a995769f00d575 https://www.encodeproject.org/files/ENCFF123NAN/@@download/ENCFF123NAN.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF345YFV bed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF101JWH, ENCFF412YTK, ENCFF644MVI 375088 ENCODE Processing Pipeline b39d11d380e03f50421cf04de59abee9 https://www.encodeproject.org/files/ENCFF345YFV/@@download/ENCFF345YFV.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF415GBQ bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF750MIM, ENCFF859KGS, ENCFF920CCJ 191860357 ENCODE Processing Pipeline 268b457bc13712540fbc3c3b3c64b4a6 https://www.encodeproject.org/files/ENCFF415GBQ/@@download/ENCFF415GBQ.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF457PSO bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF750MIM, ENCFF859KGS, ENCFF920CCJ 376292347 ENCODE Processing Pipeline 34be4c636498f0fa27eae120d0ce3e7e https://www.encodeproject.org/files/ENCFF457PSO/@@download/ENCFF457PSO.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF219ISV bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF412YTK 9638875 ENCODE Processing Pipeline d486980ffc6e414df452a0ac3d8567c4 https://www.encodeproject.org/files/ENCFF219ISV/@@download/ENCFF219ISV.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF412YTK bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF859KGS 4043931 ENCODE Processing Pipeline d6b3c6ecd2f902f4c5f59525622b62da https://www.encodeproject.org/files/ENCFF412YTK/@@download/ENCFF412YTK.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF612PZL bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF644MVI 12501354 ENCODE Processing Pipeline 1c3d3fc4c736f28ebc5e41cf7594a9de https://www.encodeproject.org/files/ENCFF612PZL/@@download/ENCFF612PZL.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF706ISJ bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF101JWH, ENCFF412YTK, ENCFF644MVI 533464 ENCODE Processing Pipeline ee9d4887416c08e558ca9ce0f11d8c69 https://www.encodeproject.org/files/ENCFF706ISJ/@@download/ENCFF706ISJ.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF216ASX bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF920CCJ 218870299 ENCODE Processing Pipeline 03792c06624aa35dd2c07ff57d1b656d https://www.encodeproject.org/files/ENCFF216ASX/@@download/ENCFF216ASX.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF101JWH bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF750MIM, ENCFF859KGS, ENCFF920CCJ 5825370 ENCODE Processing Pipeline b2c53b5b3a7acccd8ff47083c3ffb2dc https://www.encodeproject.org/files/ENCFF101JWH/@@download/ENCFF101JWH.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF783TOK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF706ISJ 1161542 ENCODE Processing Pipeline ac6d014e8b88825b6202eb63d32e50ff https://www.encodeproject.org/files/ENCFF783TOK/@@download/ENCFF783TOK.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF627GEZ bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF859KGS 208211355 ENCODE Processing Pipeline ef79f9719d8d798ef761346f9f5e5466 https://www.encodeproject.org/files/ENCFF627GEZ/@@download/ENCFF627GEZ.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF436RWF bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF859KGS 186818731 ENCODE Processing Pipeline 2af9ae38bc28d77ac1fc9f35cb25df42 https://www.encodeproject.org/files/ENCFF436RWF/@@download/ENCFF436RWF.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF722WMS bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF920CCJ 230668529 ENCODE Processing Pipeline 8a19325662972c5362a70448996455d0 https://www.encodeproject.org/files/ENCFF722WMS/@@download/ENCFF722WMS.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF644MVI bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF920CCJ 5401132 ENCODE Processing Pipeline 2d9ed99c4264b18ec0eb5cc5200d7a3d https://www.encodeproject.org/files/ENCFF644MVI/@@download/ENCFF644MVI.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF695ASQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF345YFV 883070 ENCODE Processing Pipeline 152f3419a427bc33782d91c240697afe https://www.encodeproject.org/files/ENCFF695ASQ/@@download/ENCFF695ASQ.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF004TYN bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF784SCN 211103483 ENCODE Processing Pipeline 941408bfef87467305baa6e154083e55 https://www.encodeproject.org/files/ENCFF004TYN/@@download/ENCFF004TYN.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF896ACB bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF778PDI 214779289 ENCODE Processing Pipeline 2323a9782c82579b6a8908737aa9efbf https://www.encodeproject.org/files/ENCFF896ACB/@@download/ENCFF896ACB.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF921NME bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF772PJM, ENCFF778PDI, ENCFF784SCN 191595483 ENCODE Processing Pipeline 29f94bb349675e9fd63a289170531f1f https://www.encodeproject.org/files/ENCFF921NME/@@download/ENCFF921NME.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF134GDG bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF784SCN 190920155 ENCODE Processing Pipeline 51ff96a089084f231bc8ebacf0fab703 https://www.encodeproject.org/files/ENCFF134GDG/@@download/ENCFF134GDG.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF108DKO bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF778PDI 230750456 ENCODE Processing Pipeline 927fddbdb7a9c6ef8fef9803455f8045 https://www.encodeproject.org/files/ENCFF108DKO/@@download/ENCFF108DKO.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF183DNX bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF348XKJ 9608764 ENCODE Processing Pipeline 79968a4663d31dce1323471c3ca769d4 https://www.encodeproject.org/files/ENCFF183DNX/@@download/ENCFF183DNX.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF348XKJ bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF784SCN 4015381 ENCODE Processing Pipeline fff268e3ec4aad8fb0d9f0616aa0cbd9 https://www.encodeproject.org/files/ENCFF348XKJ/@@download/ENCFF348XKJ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF193NOO bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF778PDI 5345806 ENCODE Processing Pipeline 394514c5b53808ab5532cbfc0e2931ed https://www.encodeproject.org/files/ENCFF193NOO/@@download/ENCFF193NOO.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF482PBU bed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193NOO, ENCFF348XKJ, ENCFF419RSJ, ENCFF586QIP 373605 ENCODE Processing Pipeline bf7a3dd26551f2231aa18a2735e7f1dd https://www.encodeproject.org/files/ENCFF482PBU/@@download/ENCFF482PBU.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF961EMF bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF772PJM, ENCFF778PDI, ENCFF784SCN 376814782 ENCODE Processing Pipeline 2f056394d8b0f4d31805e0dc85580f5e https://www.encodeproject.org/files/ENCFF961EMF/@@download/ENCFF961EMF.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF245LRG bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193NOO, ENCFF348XKJ, ENCFF419RSJ, ENCFF586QIP 530654 ENCODE Processing Pipeline 2c00a20ed88a81bb259b21e8faf4d309 https://www.encodeproject.org/files/ENCFF245LRG/@@download/ENCFF245LRG.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF287KON bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193NOO 12449569 ENCODE Processing Pipeline 013531a5fc8117c93577be073b180060 https://www.encodeproject.org/files/ENCFF287KON/@@download/ENCFF287KON.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF093HJF bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF586QIP 12715525 ENCODE Processing Pipeline f1bc54b9aead60bb589015156ee3f59c https://www.encodeproject.org/files/ENCFF093HJF/@@download/ENCFF093HJF.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF586QIP bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF772PJM, ENCFF778PDI, ENCFF784SCN 5817996 ENCODE Processing Pipeline 43bad6f80050c426813c06b0ebe8a806 https://www.encodeproject.org/files/ENCFF586QIP/@@download/ENCFF586QIP.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF666EAQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF245LRG 1155141 ENCODE Processing Pipeline cf041437baa3e22fc8c155245c51f62f https://www.encodeproject.org/files/ENCFF666EAQ/@@download/ENCFF666EAQ.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF218PTA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF482PBU 881864 ENCODE Processing Pipeline 75063389716c2e2fd51efd4abcc8332b https://www.encodeproject.org/files/ENCFF218PTA/@@download/ENCFF218PTA.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000OMM bam alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OMV 421032401 Richard Myers, HAIB 9f1ed45350180b894e447b6c330771bf https://www.encodeproject.org/files/ENCFF000OMM/@@download/ENCFF000OMM.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000OMN bigBed broadPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAU 108724 Richard Myers, HAIB 234dafe246937401b01de58ab5fb8534 https://www.encodeproject.org/files/ENCFF000OMN/@@download/ENCFF000OMN.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000OMO bam alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OMW 610196924 Richard Myers, HAIB f35299424dc7c3ea562dd19555e43dbc https://www.encodeproject.org/files/ENCFF000OMO/@@download/ENCFF000OMO.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000OMP bigBed broadPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAV 146053 Richard Myers, HAIB f868ff65e3cd09572fd2c081ebea5753 https://www.encodeproject.org/files/ENCFF000OMP/@@download/ENCFF000OMP.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000OMQ bigWig raw signal ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 2508789 Richard Myers, HAIB cd13ac28c49117cbf64929824369f79a https://www.encodeproject.org/files/ENCFF000OMQ/@@download/ENCFF000OMQ.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OMS bigWig raw signal ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 1898727 Richard Myers, HAIB 0d07e88b5da432cdaf92244d17eee7e0 https://www.encodeproject.org/files/ENCFF000OMS/@@download/ENCFF000OMS.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OMV fastq reads ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 330639256 Richard Myers, HAIB 07bf8e5e1b2469d10e60ac8d116c5c5c https://www.encodeproject.org/files/ENCFF000OMV/@@download/ENCFF000OMV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000OMW fastq reads ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 510222307 Richard Myers, HAIB 2b5a5c27c0008c8474a1d339ca0b535f https://www.encodeproject.org/files/ENCFF000OMW/@@download/ENCFF000OMW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF001UAU bed broadPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 43192 Richard Myers, HAIB 755b803948cdfee5906b178ea5ee7534 https://www.encodeproject.org/files/ENCFF001UAU/@@download/ENCFF001UAU.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UAV bed broadPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 51161 Richard Myers, HAIB 9e21f6b00d719592a4175ecc1b9527f6 https://www.encodeproject.org/files/ENCFF001UAV/@@download/ENCFF001UAV.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CIS bed narrowPeak optimal idr thresholded peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 127804 ENCODE Consortium Analysis Working Group ab173430c407cd66ebbf7626586208a7 https://www.encodeproject.org/files/ENCFF002CIS/@@download/ENCFF002CIS.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF294BBQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE ENCFF002CIS 345172 ENCODE Consortium be863468b42b7c52ce43be024d4149d5 https://www.encodeproject.org/files/ENCFF294BBQ/@@download/ENCFF294BBQ.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF108CBZ bam unfiltered alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OMV, ENCFF643CGH 501405220 ENCODE Processing Pipeline 73d42a39c86e03e2d09d2665996b6f45 https://www.encodeproject.org/files/ENCFF108CBZ/@@download/ENCFF108CBZ.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF712JVJ bam alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OMV, ENCFF643CGH 301598600 ENCODE Processing Pipeline 75da9772f1ff33b07e9dc04a23fb8200 https://www.encodeproject.org/files/ENCFF712JVJ/@@download/ENCFF712JVJ.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF641XBG bam alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMW, ENCFF643CGH 416855692 ENCODE Processing Pipeline 34dc5526bf5cf0d34c4cb9eb792464ed https://www.encodeproject.org/files/ENCFF641XBG/@@download/ENCFF641XBG.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF122CVO bam unfiltered alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMW, ENCFF643CGH 712468092 ENCODE Processing Pipeline ca2f9e317b7e1882b2a65b1b6ffa92b3 https://www.encodeproject.org/files/ENCFF122CVO/@@download/ENCFF122CVO.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF650JTM bam unfiltered alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OMV, ENCFF807MUK 499849644 ENCODE Processing Pipeline 1f289c7501b6f2d1577c98b106b14d1f https://www.encodeproject.org/files/ENCFF650JTM/@@download/ENCFF650JTM.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF117FPW bam alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OMV, ENCFF807MUK 301779720 ENCODE Processing Pipeline 6a79367406bc2da08e03e61ed9fd707a https://www.encodeproject.org/files/ENCFF117FPW/@@download/ENCFF117FPW.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF266SYC bam alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMW, ENCFF807MUK 417140336 ENCODE Processing Pipeline 84c3f490633ad3f3059cc905139bc43e https://www.encodeproject.org/files/ENCFF266SYC/@@download/ENCFF266SYC.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF107BHO bam unfiltered alignments ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OMW, ENCFF807MUK 709576976 ENCODE Processing Pipeline 6cbbba6a06fdade6290e9b86e299e9a0 https://www.encodeproject.org/files/ENCFF107BHO/@@download/ENCFF107BHO.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF327URG bigWig signal p-value ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF712JVJ, ENCFF948LKH 408481321 ENCODE Processing Pipeline 31e3854a7d20dfd4fa0328053fe76f54 https://www.encodeproject.org/files/ENCFF327URG/@@download/ENCFF327URG.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF413UNQ bigWig signal p-value ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF641XBG, ENCFF948LKH 429305230 ENCODE Processing Pipeline 9e9f4c65c3ea5cf12a936fd569f72e35 https://www.encodeproject.org/files/ENCFF413UNQ/@@download/ENCFF413UNQ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF541CNZ bigWig signal p-value ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF641XBG, ENCFF712JVJ, ENCFF948LKH 548429224 ENCODE Processing Pipeline 7407239305791ef17997bd6ea121415a https://www.encodeproject.org/files/ENCFF541CNZ/@@download/ENCFF541CNZ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF767IYZ bigWig fold change over control ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF641XBG, ENCFF948LKH 271892238 ENCODE Processing Pipeline 62ed63fcac95b4512828ee12e7512473 https://www.encodeproject.org/files/ENCFF767IYZ/@@download/ENCFF767IYZ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF481EHX bigWig fold change over control ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF641XBG, ENCFF712JVJ, ENCFF948LKH 411081474 ENCODE Processing Pipeline 9e11a2ccde930f2276ffc4d3faff0381 https://www.encodeproject.org/files/ENCFF481EHX/@@download/ENCFF481EHX.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF173PEI bed narrowPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF641XBG, ENCFF948LKH 3720308 ENCODE Processing Pipeline b4071f8709b73fcf68d85ecf086999e1 https://www.encodeproject.org/files/ENCFF173PEI/@@download/ENCFF173PEI.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF889EVL bigWig fold change over control ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF712JVJ, ENCFF948LKH 217173094 ENCODE Processing Pipeline 81cc1e87244ca1e1693654a4a470169a https://www.encodeproject.org/files/ENCFF889EVL/@@download/ENCFF889EVL.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF627PAL bigBed narrowPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF791JSM 10986381 ENCODE Processing Pipeline 16d7e5113c783818a76cde777a514f53 https://www.encodeproject.org/files/ENCFF627PAL/@@download/ENCFF627PAL.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF784OGS bigBed narrowPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF078BQQ 10217023 ENCODE Processing Pipeline 3a53d6fd5392cccc6dca389cab149d78 https://www.encodeproject.org/files/ENCFF784OGS/@@download/ENCFF784OGS.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF078BQQ bed narrowPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF712JVJ, ENCFF948LKH 4040577 ENCODE Processing Pipeline 08e2b1edd433e4178ef354cbb8c1f8b6 https://www.encodeproject.org/files/ENCFF078BQQ/@@download/ENCFF078BQQ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF791JSM bed narrowPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF641XBG, ENCFF712JVJ, ENCFF948LKH 4456184 ENCODE Processing Pipeline 47c42822d5658b7a5dfe11fa9893fa02 https://www.encodeproject.org/files/ENCFF791JSM/@@download/ENCFF791JSM.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF912WVM bigBed narrowPeak peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF173PEI 8014935 ENCODE Processing Pipeline 191a941c88de19691ed20afdb628b3a1 https://www.encodeproject.org/files/ENCFF912WVM/@@download/ENCFF912WVM.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF515HFN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF613DVF 206080 ENCODE Processing Pipeline 44d5cd8ea61e1224ab6d9bc450103b37 https://www.encodeproject.org/files/ENCFF515HFN/@@download/ENCFF515HFN.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF613DVF bed narrowPeak conservative idr thresholded peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF078BQQ, ENCFF173PEI, ENCFF419RSJ, ENCFF791JSM 85522 ENCODE Processing Pipeline 48c5dd1e43b41ce036e9edcab41650c5 https://www.encodeproject.org/files/ENCFF613DVF/@@download/ENCFF613DVF.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF487GLV bed narrowPeak optimal idr thresholded peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF078BQQ, ENCFF173PEI, ENCFF419RSJ, ENCFF791JSM 95778 ENCODE Processing Pipeline 12425177b305e4d7671fca9031627a72 https://www.encodeproject.org/files/ENCFF487GLV/@@download/ENCFF487GLV.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF207AVV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF487GLV 221182 ENCODE Processing Pipeline 1c3b05dc018da94ec0261cd1b15552fc https://www.encodeproject.org/files/ENCFF207AVV/@@download/ENCFF207AVV.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000QCL bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QCX 1003209775 Richard Myers, HAIB e589e938cdb5e2cd7c3d851583e41d07 https://www.encodeproject.org/files/ENCFF000QCL/@@download/ENCFF000QCL.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QCM bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QCW 766714301 Richard Myers, HAIB d76bb63fb3ad2f287f220481e509cf56 https://www.encodeproject.org/files/ENCFF000QCM/@@download/ENCFF000QCM.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QCN bigBed broadPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKN 648385 Richard Myers, HAIB 8ee48d4a512a3857fb25e9c0927c8796 https://www.encodeproject.org/files/ENCFF000QCN/@@download/ENCFF000QCN.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QCO bigBed broadPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKO 328928 Richard Myers, HAIB 16f652c702c105c75aee212c83f9dc62 https://www.encodeproject.org/files/ENCFF000QCO/@@download/ENCFF000QCO.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QCP bigWig raw signal ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 27932557 Richard Myers, HAIB 5f3ee808aa9708ece85f7f0f192e2ee1 https://www.encodeproject.org/files/ENCFF000QCP/@@download/ENCFF000QCP.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QCQ bigWig raw signal ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 13940871 Richard Myers, HAIB a3534bf0934699b9e8c3215cddf56424 https://www.encodeproject.org/files/ENCFF000QCQ/@@download/ENCFF000QCQ.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QCW fastq reads ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 869258416 Richard Myers, HAIB e380bdf76068f311df681e162f4eb5ee https://www.encodeproject.org/files/ENCFF000QCW/@@download/ENCFF000QCW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QCX fastq reads ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1033479208 Richard Myers, HAIB 36ba7684f96ef2a6776670b07f8bf8b7 https://www.encodeproject.org/files/ENCFF000QCX/@@download/ENCFF000QCX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF001UKN bed broadPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 373967 Richard Myers, HAIB 69370eb3b54abca4fb9922bcf9895392 https://www.encodeproject.org/files/ENCFF001UKN/@@download/ENCFF001UKN.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF001UKO bed broadPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 185372 Richard Myers, HAIB d34bfc68a5e6ac6ecb52a876d9d93c74 https://www.encodeproject.org/files/ENCFF001UKO/@@download/ENCFF001UKO.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF002CMF bed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 312017 ENCODE Consortium Analysis Working Group efd79bfac03aaccd0ab8859080c6ee93 https://www.encodeproject.org/files/ENCFF002CMF/@@download/ENCFF002CMF.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF230OTB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE ENCFF002CMF 642595 ENCODE Consortium 6b67264986b3d3577ebdbd839940060c https://www.encodeproject.org/files/ENCFF230OTB/@@download/ENCFF230OTB.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF665LOG bam unfiltered alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCW, ENCFF643CGH 934269192 ENCODE Processing Pipeline fe5ccfb579c4021740b8545bdaad9e8d https://www.encodeproject.org/files/ENCFF665LOG/@@download/ENCFF665LOG.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF204TUQ bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCW, ENCFF643CGH 246811240 ENCODE Processing Pipeline 377dca7f1fd60314e38691c3c3b7ae7d https://www.encodeproject.org/files/ENCFF204TUQ/@@download/ENCFF204TUQ.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF546IMN bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCX, ENCFF643CGH 586250514 ENCODE Processing Pipeline 2386e332922f0541ce3244b8686354a3 https://www.encodeproject.org/files/ENCFF546IMN/@@download/ENCFF546IMN.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF905ENZ bam unfiltered alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCX, ENCFF643CGH 1211907180 ENCODE Processing Pipeline 045d900ea7a1f2663bff0c5f69682db5 https://www.encodeproject.org/files/ENCFF905ENZ/@@download/ENCFF905ENZ.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF852HXT bam unfiltered alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCW, ENCFF807MUK 932949145 ENCODE Processing Pipeline 7a2bee2fcfeaf162281acf3678d2685b https://www.encodeproject.org/files/ENCFF852HXT/@@download/ENCFF852HXT.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF520WAB bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCW, ENCFF807MUK 246971146 ENCODE Processing Pipeline 1e35756296cde948e87bc9b786f83b6f https://www.encodeproject.org/files/ENCFF520WAB/@@download/ENCFF520WAB.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF262GNW bam unfiltered alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCX, ENCFF807MUK 1210166944 ENCODE Processing Pipeline d481d07e22c8bb2469c6a254bf67c4d2 https://www.encodeproject.org/files/ENCFF262GNW/@@download/ENCFF262GNW.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF294HHJ bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCX, ENCFF807MUK 586538608 ENCODE Processing Pipeline 9df4f20d23579efe405286e18b24958c https://www.encodeproject.org/files/ENCFF294HHJ/@@download/ENCFF294HHJ.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF502FFY bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF204TUQ, ENCFF772PJM 177040418 ENCODE Processing Pipeline 6614ecba426faa9203e7e1a4b597f9d9 https://www.encodeproject.org/files/ENCFF502FFY/@@download/ENCFF502FFY.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF011JMK bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF755HSD 5434271 ENCODE Processing Pipeline 0f4a31d6cbdfc8371cd2440b40f87dab https://www.encodeproject.org/files/ENCFF011JMK/@@download/ENCFF011JMK.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF586CEH bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF546IMN, ENCFF772PJM 207818593 ENCODE Processing Pipeline ae310e9c913d9611c156f1f14ca86140 https://www.encodeproject.org/files/ENCFF586CEH/@@download/ENCFF586CEH.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF042IHV bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF204TUQ, ENCFF546IMN, ENCFF772PJM 199303760 ENCODE Processing Pipeline 243c3133647ffc233267dcf74ee43cbb https://www.encodeproject.org/files/ENCFF042IHV/@@download/ENCFF042IHV.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF755HSD bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF204TUQ, ENCFF772PJM 2656759 ENCODE Processing Pipeline 69f832bd3be8be7034aeea121df7e0d2 https://www.encodeproject.org/files/ENCFF755HSD/@@download/ENCFF755HSD.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF286MTX bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF204TUQ, ENCFF546IMN, ENCFF772PJM 1756619 ENCODE Processing Pipeline f72241646af97bb20cbd34b0215fca7a https://www.encodeproject.org/files/ENCFF286MTX/@@download/ENCFF286MTX.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF402BGN bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF546IMN, ENCFF772PJM 218594017 ENCODE Processing Pipeline 20524aea3ea0bf0a6ea0ef36694b1629 https://www.encodeproject.org/files/ENCFF402BGN/@@download/ENCFF402BGN.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF997BZY bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF204TUQ, ENCFF772PJM 98642048 ENCODE Processing Pipeline 518a214019e26f1d4770df23c85d769d https://www.encodeproject.org/files/ENCFF997BZY/@@download/ENCFF997BZY.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF384IZU bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF204TUQ, ENCFF546IMN, ENCFF772PJM 291397438 ENCODE Processing Pipeline ddbd4049e6c83a59e058ab95c6cea482 https://www.encodeproject.org/files/ENCFF384IZU/@@download/ENCFF384IZU.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF082DAI bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF546IMN, ENCFF772PJM 2474090 ENCODE Processing Pipeline 1217421d297fbc437dca3d0f29a41e06 https://www.encodeproject.org/files/ENCFF082DAI/@@download/ENCFF082DAI.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF102SLH bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF286MTX 3436197 ENCODE Processing Pipeline 10da411ea83b797bd5e4f3dc05e63fa3 https://www.encodeproject.org/files/ENCFF102SLH/@@download/ENCFF102SLH.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF975FXR bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF082DAI 5349108 ENCODE Processing Pipeline 0b2e2472cffa0f810867935a8391c739 https://www.encodeproject.org/files/ENCFF975FXR/@@download/ENCFF975FXR.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF336QGQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF809CZV 320152 ENCODE Processing Pipeline 757c03f350e8a6367b34e6eef30d7a50 https://www.encodeproject.org/files/ENCFF336QGQ/@@download/ENCFF336QGQ.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF427YTW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF023ZUW 413060 ENCODE Processing Pipeline 647f6aae3b44674acc3ccc708b5c11c7 https://www.encodeproject.org/files/ENCFF427YTW/@@download/ENCFF427YTW.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF809CZV bed narrowPeak conservative idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF082DAI, ENCFF286MTX, ENCFF419RSJ, ENCFF755HSD 162696 ENCODE Processing Pipeline 1be4893c8ac580d221c18ca8fba2d66c https://www.encodeproject.org/files/ENCFF809CZV/@@download/ENCFF809CZV.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF023ZUW bed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF082DAI, ENCFF286MTX, ENCFF419RSJ, ENCFF755HSD 236250 ENCODE Processing Pipeline 32adbc5e9e50c18860ffbb3c15be97b6 https://www.encodeproject.org/files/ENCFF023ZUW/@@download/ENCFF023ZUW.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF985MPR fastq reads ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF850QKH 2565746252 Richard Myers, HAIB 0383f7b419a636fe45f6fee295f9f5ae SRA:SRR6213001 https://www.encodeproject.org/files/ENCFF985MPR/@@download/ENCFF985MPR.fastq.gz HiSeq 2000 /files/ENCFF960ZTN/ released antibody characterized with exemption ENCFF850QKH fastq reads ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF985MPR 2634971744 Richard Myers, HAIB 5129a6eb1ced3f08a700e802e38ec221 SRA:SRR6213001 https://www.encodeproject.org/files/ENCFF850QKH/@@download/ENCFF850QKH.fastq.gz HiSeq 2000 /files/ENCFF985KLY/ released antibody characterized with exemption ENCFF148HNI bam unfiltered alignments ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF807MUK, ENCFF850QKH, ENCFF985MPR 6229784961 ENCODE Processing Pipeline 6f01b0ddb1b27d28700e055e2dac8896 https://www.encodeproject.org/files/ENCFF148HNI/@@download/ENCFF148HNI.bam hg19 released antibody characterized with exemption ENCFF227ZUD bam unfiltered alignments ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF850QKH, ENCFF985MPR 6261927196 ENCODE Processing Pipeline fb158428aa8dc0c0d7d6a9b8e2e9577b https://www.encodeproject.org/files/ENCFF227ZUD/@@download/ENCFF227ZUD.bam GRCh38 released antibody characterized with exemption ENCFF435EWI bam alignments ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF807MUK, ENCFF850QKH, ENCFF985MPR 4718261718 ENCODE Processing Pipeline 14f5b99bd6b993a31ac60d935a98a4a5 https://www.encodeproject.org/files/ENCFF435EWI/@@download/ENCFF435EWI.bam hg19 released antibody characterized with exemption ENCFF502KKQ bam alignments ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF850QKH, ENCFF985MPR 4727976166 ENCODE Processing Pipeline 59852c42d4cfeefcb967895c75bcd82e https://www.encodeproject.org/files/ENCFF502KKQ/@@download/ENCFF502KKQ.bam GRCh38 released antibody characterized with exemption ENCFF189NYU bigWig signal p-value ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF435EWI 1490186667 ENCODE Processing Pipeline 80097e516f2a4389b20212166066adfd https://www.encodeproject.org/files/ENCFF189NYU/@@download/ENCFF189NYU.bigWig hg19 released antibody characterized with exemption ENCFF248YXA bigWig fold change over control ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF435EWI 1489770520 ENCODE Processing Pipeline b04294d4e47031878bb925df1c398a07 https://www.encodeproject.org/files/ENCFF248YXA/@@download/ENCFF248YXA.bigWig hg19 released antibody characterized with exemption ENCFF099GES bed narrowPeak peaks ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF435EWI 4235605 ENCODE Processing Pipeline c82f6830ae4ec56fbbcc45e5cc3d739b https://www.encodeproject.org/files/ENCFF099GES/@@download/ENCFF099GES.bed.gz hg19 released antibody characterized with exemption ENCFF058NDV bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF459MDC 15772 ENCODE Processing Pipeline 343fbd4db380949a0cd0c04b7366decc https://www.encodeproject.org/files/ENCFF058NDV/@@download/ENCFF058NDV.bigBed hg19 released antibody characterized with exemption ENCFF109RUD bigBed narrowPeak peaks ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF099GES 7239195 ENCODE Processing Pipeline 21b378bed0623c3d0143003cbe54d6e4 https://www.encodeproject.org/files/ENCFF109RUD/@@download/ENCFF109RUD.bigBed hg19 released antibody characterized with exemption ENCFF459MDC bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF099GES 640 ENCODE Processing Pipeline cb056cda2a38a919fd77afcd74702275 https://www.encodeproject.org/files/ENCFF459MDC/@@download/ENCFF459MDC.bed.gz hg19 released antibody characterized with exemption ENCFF895RTD bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF543DBA 919 ENCODE Processing Pipeline bb899ec11657c0cb260e01a33c0fce0d https://www.encodeproject.org/files/ENCFF895RTD/@@download/ENCFF895RTD.bed.gz GRCh38 released antibody characterized with exemption ENCFF282FFQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF895RTD 69342 ENCODE Processing Pipeline e210caa4bdd8f60870c44eaf0daea061 https://www.encodeproject.org/files/ENCFF282FFQ/@@download/ENCFF282FFQ.bigBed GRCh38 released antibody characterized with exemption ENCFF543DBA bed narrowPeak peaks ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF502KKQ 4250736 ENCODE Processing Pipeline f0597191a1f5e89733063a9aea461c2c https://www.encodeproject.org/files/ENCFF543DBA/@@download/ENCFF543DBA.bed.gz GRCh38 released antibody characterized with exemption ENCFF537FYP bigWig signal p-value ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF502KKQ 1492594106 ENCODE Processing Pipeline 2806131cd447dd4e05c5affe9f37f821 https://www.encodeproject.org/files/ENCFF537FYP/@@download/ENCFF537FYP.bigWig GRCh38 released antibody characterized with exemption ENCFF293JGY bigBed narrowPeak peaks ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF543DBA 7268909 ENCODE Processing Pipeline 277dde35225cc91293e8b35c37865681 https://www.encodeproject.org/files/ENCFF293JGY/@@download/ENCFF293JGY.bigBed GRCh38 released antibody characterized with exemption ENCFF830DPZ bigWig fold change over control ENCSR047DRF ChIP-seq UBERON:0010414 omental fat pad tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF502KKQ 1487983020 ENCODE Processing Pipeline 42f5489d529b5f4209ac3ac51ea7816d https://www.encodeproject.org/files/ENCFF830DPZ/@@download/ENCFF830DPZ.bigWig GRCh38 released antibody characterized with exemption ENCFF036RTO fastq reads ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF057CUF 2115448675 Richard Myers, HAIB 5275690b05cbf12914e9aa38f0dd5cc5 https://www.encodeproject.org/files/ENCFF036RTO/@@download/ENCFF036RTO.fastq.gz HiSeq 2000 /files/ENCFF843ANS/ released antibody characterized with exemption experiment not submitted to GEO ENCFF057CUF fastq reads ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF036RTO 2150632744 Richard Myers, HAIB 483c6fb4bab5d3618ecf30065a6c2dad https://www.encodeproject.org/files/ENCFF057CUF/@@download/ENCFF057CUF.fastq.gz HiSeq 2000 /files/ENCFF804NZY/ released antibody characterized with exemption experiment not submitted to GEO ENCFF131YXI bam unfiltered alignments ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF036RTO, ENCFF057CUF, ENCFF807MUK 5216440541 ENCODE Processing Pipeline f5b605bde8cd2d046f03f96ddf6ac7ff https://www.encodeproject.org/files/ENCFF131YXI/@@download/ENCFF131YXI.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF498ZOO bam alignments ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF036RTO, ENCFF057CUF, ENCFF807MUK 4058470209 ENCODE Processing Pipeline 49b9aa4eb0fd3770eacf0fb4351acb41 https://www.encodeproject.org/files/ENCFF498ZOO/@@download/ENCFF498ZOO.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF629JEH bam alignments ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF036RTO, ENCFF057CUF, ENCFF643CGH 4061238100 ENCODE Processing Pipeline 794fc72d04c0b598658254869ce4feb8 https://www.encodeproject.org/files/ENCFF629JEH/@@download/ENCFF629JEH.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF370UVE bam unfiltered alignments ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF036RTO, ENCFF057CUF, ENCFF643CGH 5241373556 ENCODE Processing Pipeline 10ff07824bc162882b2350e37ec87abc https://www.encodeproject.org/files/ENCFF370UVE/@@download/ENCFF370UVE.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF937PXN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF547RTC 215305 ENCODE Processing Pipeline 6570c39efd498e257cf0a17482b2e64d https://www.encodeproject.org/files/ENCFF937PXN/@@download/ENCFF937PXN.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF971ZTQ bigWig signal p-value ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF629JEH, ENCFF711ZWZ 1287125856 ENCODE Processing Pipeline 01d59795240c9142e54181b7313615e1 https://www.encodeproject.org/files/ENCFF971ZTQ/@@download/ENCFF971ZTQ.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF209EBN bigWig fold change over control ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF629JEH, ENCFF711ZWZ 1234545856 ENCODE Processing Pipeline ac02b7e25deecb68dc38a533663737aa https://www.encodeproject.org/files/ENCFF209EBN/@@download/ENCFF209EBN.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF300KXC bed narrowPeak peaks ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF629JEH, ENCFF711ZWZ 5477370 ENCODE Processing Pipeline b3fb453f57c1ed3dbee68803c0c6f25d https://www.encodeproject.org/files/ENCFF300KXC/@@download/ENCFF300KXC.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF547RTC bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF300KXC, ENCFF419RSJ 97487 ENCODE Processing Pipeline 3f063b1627a4b1af21576348d6e090ec https://www.encodeproject.org/files/ENCFF547RTC/@@download/ENCFF547RTC.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF549OPB bigBed narrowPeak peaks ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF300KXC 11854652 ENCODE Processing Pipeline d753ee9ccc7c27d805de5b08a4e53b64 https://www.encodeproject.org/files/ENCFF549OPB/@@download/ENCFF549OPB.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF079WAL bigWig fold change over control ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF498ZOO, ENCFF501SMY 1251429603 ENCODE Processing Pipeline ce0492127bec7fdf9b3c97b2feba6d8c https://www.encodeproject.org/files/ENCFF079WAL/@@download/ENCFF079WAL.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF760YJA bigBed narrowPeak peaks ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF394RPT 11839159 ENCODE Processing Pipeline 035f9e23f7e261010994c7d100f467c4 https://www.encodeproject.org/files/ENCFF760YJA/@@download/ENCFF760YJA.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF909NKP bigWig signal p-value ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF498ZOO, ENCFF501SMY 1293899256 ENCODE Processing Pipeline 0cf5099527a6f1e9718ef0ae54333338 https://www.encodeproject.org/files/ENCFF909NKP/@@download/ENCFF909NKP.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF782WAR bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF957HGU 212319 ENCODE Processing Pipeline a431f24b97718b43dbb90c09a1188455 https://www.encodeproject.org/files/ENCFF782WAR/@@download/ENCFF782WAR.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF394RPT bed narrowPeak peaks ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF498ZOO, ENCFF501SMY 5477979 ENCODE Processing Pipeline 14cc0d2d1c455cf106c34196e8ef57df https://www.encodeproject.org/files/ENCFF394RPT/@@download/ENCFF394RPT.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF957HGU bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR491PTJ ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF394RPT 97457 ENCODE Processing Pipeline 7e98cdc99eeb54841500413769bdf2c3 https://www.encodeproject.org/files/ENCFF957HGU/@@download/ENCFF957HGU.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF000QJT bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QKF 651616111 Richard Myers, HAIB 39b0054740634de5c0835dc3afa333b6 https://www.encodeproject.org/files/ENCFF000QJT/@@download/ENCFF000QJT.bam hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QJU bigBed broadPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UMB 156851 Richard Myers, HAIB 11b24f9bf231b4e82e5046d5d1a55fb3 https://www.encodeproject.org/files/ENCFF000QJU/@@download/ENCFF000QJU.bigBed hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QJV bigBed broadPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UMC 1457393 Richard Myers, HAIB e1df68bae6f009575b579030dd97e0f3 https://www.encodeproject.org/files/ENCFF000QJV/@@download/ENCFF000QJV.bigBed hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QJW bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QKI 1068625433 Richard Myers, HAIB 7aa214fcebd46a0af153437f8fe85a69 https://www.encodeproject.org/files/ENCFF000QJW/@@download/ENCFF000QJW.bam hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QJZ bigWig raw signal ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 6891263 Richard Myers, HAIB 9becec0cf19780ceb815bbe3f3d59c1b https://www.encodeproject.org/files/ENCFF000QJZ/@@download/ENCFF000QJZ.bigWig hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QKA bigWig raw signal ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 38289861 Richard Myers, HAIB 90a334ff291c31ec565fe3a48e10f4cb https://www.encodeproject.org/files/ENCFF000QKA/@@download/ENCFF000QKA.bigWig hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QKF fastq reads ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 707329662 Richard Myers, HAIB 017471644cf8b8f05a0e7c31b3ad0f8e https://www.encodeproject.org/files/ENCFF000QKF/@@download/ENCFF000QKF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QKI fastq reads ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1091684327 Richard Myers, HAIB 6501b550811ccb574f5cd02b9bb5fb2f https://www.encodeproject.org/files/ENCFF000QKI/@@download/ENCFF000QKI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UMB bed broadPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 73111 Richard Myers, HAIB cd54504c6d0639983b7f883b3aa7fc3e https://www.encodeproject.org/files/ENCFF001UMB/@@download/ENCFF001UMB.bed.gz hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UMC bed broadPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 780775 Richard Myers, HAIB 12795568909c4fa8a89df95b3a2f6c09 https://www.encodeproject.org/files/ENCFF001UMC/@@download/ENCFF001UMC.bed.gz hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF002CMX bed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 477726 ENCODE Consortium Analysis Working Group ad2e68ab363f735a8ae9c4144c611460 https://www.encodeproject.org/files/ENCFF002CMX/@@download/ENCFF002CMX.bed.gz hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF648NKC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE ENCFF002CMX 1048797 ENCODE Consortium aba1f321aa1c9e3e43db20379766fe1c https://www.encodeproject.org/files/ENCFF648NKC/@@download/ENCFF648NKC.bigBed hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF033HSE bam unfiltered alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKF, ENCFF643CGH 870334186 ENCODE Processing Pipeline 06d1f5940c8d8976e1878726dc94239c https://www.encodeproject.org/files/ENCFF033HSE/@@download/ENCFF033HSE.bam GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF567GMS bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKF, ENCFF643CGH 314274999 ENCODE Processing Pipeline 3fcb9ae7eac6017d046db9fdae60a240 https://www.encodeproject.org/files/ENCFF567GMS/@@download/ENCFF567GMS.bam GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF723CCK bam unfiltered alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKI, ENCFF643CGH 1367082469 ENCODE Processing Pipeline 7a3ca0a15d6b7908a0b324c9b2eceea5 https://www.encodeproject.org/files/ENCFF723CCK/@@download/ENCFF723CCK.bam GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF067TWQ bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKI, ENCFF643CGH 732096181 ENCODE Processing Pipeline 0b4e602e207b942e965e1c7f044929eb https://www.encodeproject.org/files/ENCFF067TWQ/@@download/ENCFF067TWQ.bam GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF470KXE bam unfiltered alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKF, ENCFF807MUK 868022856 ENCODE Processing Pipeline 38677f62d3a1a6091f4a133096172988 https://www.encodeproject.org/files/ENCFF470KXE/@@download/ENCFF470KXE.bam hg19 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF189XLI bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKF, ENCFF807MUK 314613447 ENCODE Processing Pipeline 3fead3e9598f0ce64f3686cc9ce43ccd https://www.encodeproject.org/files/ENCFF189XLI/@@download/ENCFF189XLI.bam hg19 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF280JRK bam unfiltered alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKI, ENCFF807MUK 1364721177 ENCODE Processing Pipeline 0713d0d16856cbeb940a763d5ad7ceae https://www.encodeproject.org/files/ENCFF280JRK/@@download/ENCFF280JRK.bam hg19 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF872BSD bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKI, ENCFF807MUK 732713870 ENCODE Processing Pipeline c09b4756f74c36bf14527f52df5fe98b https://www.encodeproject.org/files/ENCFF872BSD/@@download/ENCFF872BSD.bam hg19 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF955NDO bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF567GMS, ENCFF913HVS 360771250 ENCODE Processing Pipeline 41e97f2b0e155089f399a5a86c06bfd3 https://www.encodeproject.org/files/ENCFF955NDO/@@download/ENCFF955NDO.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF128ALY bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF067TWQ, ENCFF234NVU, ENCFF913HVS 614292126 ENCODE Processing Pipeline f383e6269341ae4700f8f6ce20724ce3 https://www.encodeproject.org/files/ENCFF128ALY/@@download/ENCFF128ALY.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF230VJT bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067TWQ, ENCFF234NVU, ENCFF567GMS, ENCFF913HVS 638026892 ENCODE Processing Pipeline a7dab16f98e045aded9e19c5ad1212f8 https://www.encodeproject.org/files/ENCFF230VJT/@@download/ENCFF230VJT.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF404MNG bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF067TWQ, ENCFF234NVU, ENCFF913HVS 357318789 ENCODE Processing Pipeline b4c2b3ca0434a13d86472f87e13dc896 https://www.encodeproject.org/files/ENCFF404MNG/@@download/ENCFF404MNG.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF551ZHN bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF567GMS, ENCFF913HVS 148829575 ENCODE Processing Pipeline a4635d341ca63c084cf04bd68ee766f3 https://www.encodeproject.org/files/ENCFF551ZHN/@@download/ENCFF551ZHN.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF023AFF bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067TWQ, ENCFF234NVU, ENCFF567GMS, ENCFF913HVS 488567089 ENCODE Processing Pipeline 4f6b20f3af4952025fc551c6cf3a1e6b https://www.encodeproject.org/files/ENCFF023AFF/@@download/ENCFF023AFF.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF541WVG bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF567GMS, ENCFF913HVS 2421088 ENCODE Processing Pipeline 3bbca13cf836fd9b3061d2d9d000ff37 https://www.encodeproject.org/files/ENCFF541WVG/@@download/ENCFF541WVG.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF908XHK bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF067TWQ, ENCFF234NVU, ENCFF913HVS 5930295 ENCODE Processing Pipeline dce3876dc35ff66f9ce31a1e98a96d32 https://www.encodeproject.org/files/ENCFF908XHK/@@download/ENCFF908XHK.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF842DGW bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF541WVG 5341845 ENCODE Processing Pipeline 1703ace719dfe2a144e637aaccc5346e https://www.encodeproject.org/files/ENCFF842DGW/@@download/ENCFF842DGW.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF535FVE bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067TWQ, ENCFF234NVU, ENCFF567GMS, ENCFF913HVS 6003961 ENCODE Processing Pipeline 848e5667d4bfa1ea05c8b4392248d48a https://www.encodeproject.org/files/ENCFF535FVE/@@download/ENCFF535FVE.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF087AIY bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF908XHK 13162484 ENCODE Processing Pipeline 8d5e5f0b77c9604cdb8989366bbe53f3 https://www.encodeproject.org/files/ENCFF087AIY/@@download/ENCFF087AIY.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF922RRJ bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF535FVE 13290388 ENCODE Processing Pipeline 22010be82bd6ca15b4de250bb6eae1bc https://www.encodeproject.org/files/ENCFF922RRJ/@@download/ENCFF922RRJ.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF157ELX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF938BND 268933 ENCODE Processing Pipeline 36d8e00121d911d3f97e37a1e82eeb84 https://www.encodeproject.org/files/ENCFF157ELX/@@download/ENCFF157ELX.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF024TJO bed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF535FVE, ENCFF541WVG, ENCFF908XHK 507864 ENCODE Processing Pipeline 0dd0a3eb71a0ca45616c9c9568ab7bb5 https://www.encodeproject.org/files/ENCFF024TJO/@@download/ENCFF024TJO.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF938BND bed narrowPeak conservative idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF535FVE, ENCFF541WVG, ENCFF908XHK 134424 ENCODE Processing Pipeline 7305cbf694d07d141a50db874c165cce https://www.encodeproject.org/files/ENCFF938BND/@@download/ENCFF938BND.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF052UCG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF024TJO 1084835 ENCODE Processing Pipeline 21bd4d34b63bf1c10be69aaefb642fc1 https://www.encodeproject.org/files/ENCFF052UCG/@@download/ENCFF052UCG.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF251IZE fastq reads ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF871SZT 1971100240 Richard Myers, HAIB ff04516575b3d3cac4c7d35e061fca68 https://www.encodeproject.org/files/ENCFF251IZE/@@download/ENCFF251IZE.fastq.gz HiSeq 2000 /files/ENCFF094LCI/ released antibody characterized with exemption experiment not submitted to GEO ENCFF871SZT fastq reads ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF251IZE 2058173566 Richard Myers, HAIB d89843bbcd970dda7ab75acc49bc7dcb https://www.encodeproject.org/files/ENCFF871SZT/@@download/ENCFF871SZT.fastq.gz HiSeq 2000 /files/ENCFF818HXE/ released antibody characterized with exemption experiment not submitted to GEO ENCFF647VFH bam unfiltered alignments ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF251IZE, ENCFF807MUK, ENCFF871SZT 4788066289 ENCODE Processing Pipeline 50dcd80212d1ea8866b87c8238b7146c https://www.encodeproject.org/files/ENCFF647VFH/@@download/ENCFF647VFH.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF796XBF bam alignments ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF251IZE, ENCFF807MUK, ENCFF871SZT 3662952050 ENCODE Processing Pipeline df5b88debd6310033627adb6358c5a2f https://www.encodeproject.org/files/ENCFF796XBF/@@download/ENCFF796XBF.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF403YCP bam unfiltered alignments ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF251IZE, ENCFF643CGH, ENCFF871SZT 4803542439 ENCODE Processing Pipeline ccc81652826733f5eaec99c2278654a7 https://www.encodeproject.org/files/ENCFF403YCP/@@download/ENCFF403YCP.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF987NCX bam alignments ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF251IZE, ENCFF643CGH, ENCFF871SZT 3663011387 ENCODE Processing Pipeline 120812ebeccba388e9db2d52c5359f62 https://www.encodeproject.org/files/ENCFF987NCX/@@download/ENCFF987NCX.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF826KLY bigWig signal p-value ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF729OTP, ENCFF987NCX 1258946250 ENCODE Processing Pipeline 432bf21c371882baf2b8686d25297247 https://www.encodeproject.org/files/ENCFF826KLY/@@download/ENCFF826KLY.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF762LFD bed narrowPeak peaks ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF729OTP, ENCFF987NCX 7114916 ENCODE Processing Pipeline 3ff66fc1c7bb7d4ecae990e56f22564f https://www.encodeproject.org/files/ENCFF762LFD/@@download/ENCFF762LFD.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF136VFB bigWig signal p-value ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF468VJA, ENCFF796XBF 1172259971 ENCODE Processing Pipeline 25dcd2420be043be47c50a689f83413e https://www.encodeproject.org/files/ENCFF136VFB/@@download/ENCFF136VFB.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF241OEC bigBed narrowPeak peaks ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF762LFD 13179572 ENCODE Processing Pipeline b6419a281b19f4703993c7046e1be535 https://www.encodeproject.org/files/ENCFF241OEC/@@download/ENCFF241OEC.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF833ABG bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF776AUH 1207651 ENCODE Processing Pipeline 8d163aabc162ede90d7463eb87aa3a05 https://www.encodeproject.org/files/ENCFF833ABG/@@download/ENCFF833ABG.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF844DMB bigWig fold change over control ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF468VJA, ENCFF796XBF 1220504433 ENCODE Processing Pipeline ff64e9f0ff7b07c899d466f9dd68de4e https://www.encodeproject.org/files/ENCFF844DMB/@@download/ENCFF844DMB.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF643JAF bigWig fold change over control ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF729OTP, ENCFF987NCX 1220226526 ENCODE Processing Pipeline fca1c626c0b0487476fa9d5d413a9506 https://www.encodeproject.org/files/ENCFF643JAF/@@download/ENCFF643JAF.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF776AUH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF762LFD 615349 ENCODE Processing Pipeline c392b9da87b1a2f751ea0c0d2aa4b0c3 https://www.encodeproject.org/files/ENCFF776AUH/@@download/ENCFF776AUH.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF946CXU bed narrowPeak peaks ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF468VJA, ENCFF796XBF 7054765 ENCODE Processing Pipeline 3ccc70b6aafcb62b9d5bef44f8907ddd https://www.encodeproject.org/files/ENCFF946CXU/@@download/ENCFF946CXU.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF580CNK bigBed narrowPeak peaks ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF946CXU 13117743 ENCODE Processing Pipeline 1d9226a84e9012720a915c8a96920393 https://www.encodeproject.org/files/ENCFF580CNK/@@download/ENCFF580CNK.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF770MEC bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF427HSH 1197124 ENCODE Processing Pipeline 7116167e0f29fc596bd534d99256f2aa https://www.encodeproject.org/files/ENCFF770MEC/@@download/ENCFF770MEC.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF427HSH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR400WEK ChIP-seq UBERON:0008367 breast epithelium tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF946CXU 607459 ENCODE Processing Pipeline c0cf8bf3251de2af940916be579b66bf https://www.encodeproject.org/files/ENCFF427HSH/@@download/ENCFF427HSH.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF000OGR bam alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OHD 613483194 Richard Myers, HAIB 24a2ca939da55ffe2958023eeffee74f https://www.encodeproject.org/files/ENCFF000OGR/@@download/ENCFF000OGR.bam hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000OGS bigBed broadPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZM 255525 Richard Myers, HAIB af4e1b9327cd084639919d2e768ad785 https://www.encodeproject.org/files/ENCFF000OGS/@@download/ENCFF000OGS.bigBed hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000OGT bigBed broadPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZN 215469 Richard Myers, HAIB 0ea13b70bd207cb37ad075ea61bb9954 https://www.encodeproject.org/files/ENCFF000OGT/@@download/ENCFF000OGT.bigBed hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000OGU bam alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OHN 1391925461 Richard Myers, HAIB 1e8c35412f97c002d1f86d2cc784d48b https://www.encodeproject.org/files/ENCFF000OGU/@@download/ENCFF000OGU.bam hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000OGW bigWig raw signal ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 26954765 Richard Myers, HAIB 61b1d1adab0e954fe654d1c8526d291c https://www.encodeproject.org/files/ENCFF000OGW/@@download/ENCFF000OGW.bigWig hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000OGX bigWig raw signal ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 51501435 Richard Myers, HAIB 08ac028c8f96fa4fe9c5e8b9bdf15395 https://www.encodeproject.org/files/ENCFF000OGX/@@download/ENCFF000OGX.bigWig hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000OHD fastq reads ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1342435398 Richard Myers, HAIB 6ac3ffa3d0a83540737df8b93631025a https://www.encodeproject.org/files/ENCFF000OHD/@@download/ENCFF000OHD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODG/ released inconsistent control read length, borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000OHN fastq reads ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 25 single-ended 379088159 Richard Myers, HAIB 0f47495c79c51b624861af04ab420b56 https://www.encodeproject.org/files/ENCFF000OHN/@@download/ENCFF000OHN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODJ/ released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF001TZM bed broadPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 121809 Richard Myers, HAIB a02761e197f19db12dbeec83a26b0f35 https://www.encodeproject.org/files/ENCFF001TZM/@@download/ENCFF001TZM.bed.gz hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF001TZN bed broadPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 95852 Richard Myers, HAIB f8b69275bef0e183cd9e21d590d15b30 https://www.encodeproject.org/files/ENCFF001TZN/@@download/ENCFF001TZN.bed.gz hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF002CIB bed narrowPeak optimal idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 213517 ENCODE Consortium Analysis Working Group 1bf2991d99a656a47e86871db2d854ab https://www.encodeproject.org/files/ENCFF002CIB/@@download/ENCFF002CIB.bed.gz hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF595QNM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE ENCFF002CIB 459056 ENCODE Consortium 81bf9f199d858f0f285b16f1de7766e2 https://www.encodeproject.org/files/ENCFF595QNM/@@download/ENCFF595QNM.bigBed hg19 archived borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF798UJL bam unfiltered alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OHN, ENCFF807MUK 585074841 ENCODE Processing Pipeline f48c8ba9b764f79a4cc2c701a61d8d0b https://www.encodeproject.org/files/ENCFF798UJL/@@download/ENCFF798UJL.bam hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF899CBZ bam alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OHN, ENCFF807MUK 252147042 ENCODE Processing Pipeline fcb27e6620808b6aeb3f427af5f8cdda https://www.encodeproject.org/files/ENCFF899CBZ/@@download/ENCFF899CBZ.bam hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF898NMW bam unfiltered alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OHN, ENCFF643CGH 586651835 ENCODE Processing Pipeline b9df53886d82e602f66dc9e1050d466f https://www.encodeproject.org/files/ENCFF898NMW/@@download/ENCFF898NMW.bam GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF737VAT bam alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OHN, ENCFF643CGH 255029592 ENCODE Processing Pipeline 85e8d4a24f36fd3a146fd9ef780021ec https://www.encodeproject.org/files/ENCFF737VAT/@@download/ENCFF737VAT.bam GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF616RGW bam unfiltered alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OHD, ENCFF643CGH 1278803126 ENCODE Processing Pipeline 1ba98d49432730069089a970b2319c06 https://www.encodeproject.org/files/ENCFF616RGW/@@download/ENCFF616RGW.bam GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF845IBA bam unfiltered alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OHD, ENCFF807MUK 1279036426 ENCODE Processing Pipeline ae3eaa8ab858aa486d5890d5ce47fec6 https://www.encodeproject.org/files/ENCFF845IBA/@@download/ENCFF845IBA.bam hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF281OFW bam alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OHD, ENCFF807MUK 323777819 ENCODE Processing Pipeline cd1c00bd3bccf185c128a98ff22e1979 https://www.encodeproject.org/files/ENCFF281OFW/@@download/ENCFF281OFW.bam hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF074OYP bam alignments ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OHD, ENCFF643CGH 326611157 ENCODE Processing Pipeline 9803b0e54dd2d4caf6e288471a4fb4ab https://www.encodeproject.org/files/ENCFF074OYP/@@download/ENCFF074OYP.bam GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF646IET bigWig signal p-value ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF074OYP, ENCFF289ONG, ENCFF862QZT 531292140 ENCODE Processing Pipeline cb99407c4fe8aae6865429df28708a94 https://www.encodeproject.org/files/ENCFF646IET/@@download/ENCFF646IET.bigWig GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF648SWK bigWig signal p-value ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF281OFW, ENCFF416BIN, ENCFF818ZLY 499786399 ENCODE Processing Pipeline 4b057b30d5568aa7e74ba0624d052529 https://www.encodeproject.org/files/ENCFF648SWK/@@download/ENCFF648SWK.bigWig hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF338QSO bigWig signal p-value ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF074OYP, ENCFF289ONG, ENCFF737VAT, ENCFF862QZT 589327607 ENCODE Processing Pipeline 6d26189c64a97c7f6ea93245859987c7 https://www.encodeproject.org/files/ENCFF338QSO/@@download/ENCFF338QSO.bigWig GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF204SRC bigWig signal p-value ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF289ONG, ENCFF737VAT, ENCFF862QZT 535994248 ENCODE Processing Pipeline 0de0cc58c709fb0d6f467fd1f71cde41 https://www.encodeproject.org/files/ENCFF204SRC/@@download/ENCFF204SRC.bigWig GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF255MKP bigWig signal p-value ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF416BIN, ENCFF818ZLY, ENCFF899CBZ 478277269 ENCODE Processing Pipeline 27ef5139e162e2ad94d7c3115e4429ad https://www.encodeproject.org/files/ENCFF255MKP/@@download/ENCFF255MKP.bigWig hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF556UQH bigWig signal p-value ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF281OFW, ENCFF416BIN, ENCFF818ZLY, ENCFF899CBZ 572127130 ENCODE Processing Pipeline 67c2a6a6d5696b66f20281c3102abd15 https://www.encodeproject.org/files/ENCFF556UQH/@@download/ENCFF556UQH.bigWig hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF991WSC bigWig fold change over control ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF074OYP, ENCFF289ONG, ENCFF862QZT 274747835 ENCODE Processing Pipeline f8a8dbaff67786ba5e44efa4b4d14a4f https://www.encodeproject.org/files/ENCFF991WSC/@@download/ENCFF991WSC.bigWig GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF052JHA bigWig fold change over control ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF281OFW, ENCFF416BIN, ENCFF818ZLY 272977058 ENCODE Processing Pipeline 7286330509967ec6a2f8f893c6e0ca87 https://www.encodeproject.org/files/ENCFF052JHA/@@download/ENCFF052JHA.bigWig hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF425CNQ bigWig fold change over control ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF416BIN, ENCFF818ZLY, ENCFF899CBZ 228102171 ENCODE Processing Pipeline 6952e8c255ed4eabe10be7540fd1c4d4 https://www.encodeproject.org/files/ENCFF425CNQ/@@download/ENCFF425CNQ.bigWig hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF856RZG bigWig fold change over control ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF289ONG, ENCFF737VAT, ENCFF862QZT 228948768 ENCODE Processing Pipeline c39472b2b1126e0079a3f6c777b4fbd1 https://www.encodeproject.org/files/ENCFF856RZG/@@download/ENCFF856RZG.bigWig GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF344JQP bigWig fold change over control ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF074OYP, ENCFF289ONG, ENCFF737VAT, ENCFF862QZT 431554330 ENCODE Processing Pipeline 4cf048056c25406c6c9b6de27ca1bf47 https://www.encodeproject.org/files/ENCFF344JQP/@@download/ENCFF344JQP.bigWig GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF427RYH bigWig fold change over control ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF281OFW, ENCFF416BIN, ENCFF818ZLY, ENCFF899CBZ 423716196 ENCODE Processing Pipeline b246cce2e37729f0cbd733cfa7b19c3d https://www.encodeproject.org/files/ENCFF427RYH/@@download/ENCFF427RYH.bigWig hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF274NLK bed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF074OYP, ENCFF289ONG, ENCFF862QZT 4422024 ENCODE Processing Pipeline 71b940ff4d33a9caf1927be37d115a9e https://www.encodeproject.org/files/ENCFF274NLK/@@download/ENCFF274NLK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF277JBW bed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF289ONG, ENCFF737VAT, ENCFF862QZT 2402679 ENCODE Processing Pipeline 0829a49276284e40689ba46092519c52 https://www.encodeproject.org/files/ENCFF277JBW/@@download/ENCFF277JBW.bed.gz GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF507WAU bed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF074OYP, ENCFF289ONG, ENCFF737VAT, ENCFF862QZT 5097825 ENCODE Processing Pipeline 30b3fb90859a29a2527acfcaffbef4c3 https://www.encodeproject.org/files/ENCFF507WAU/@@download/ENCFF507WAU.bed.gz GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF518BAN bed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF416BIN, ENCFF818ZLY, ENCFF899CBZ 2426289 ENCODE Processing Pipeline 25dfe68525a7de8c54c3f2ec7bebd924 https://www.encodeproject.org/files/ENCFF518BAN/@@download/ENCFF518BAN.bed.gz hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF715BUI bigBed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF277JBW 5033240 ENCODE Processing Pipeline 17ee21ff3c081c5ba0795427414c4543 https://www.encodeproject.org/files/ENCFF715BUI/@@download/ENCFF715BUI.bigBed GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF066IRT bigBed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF274NLK 10014510 ENCODE Processing Pipeline 5763d1cc8ac1fb6f158fc4225e6fe81e https://www.encodeproject.org/files/ENCFF066IRT/@@download/ENCFF066IRT.bigBed GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF083HDR bed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF281OFW, ENCFF416BIN, ENCFF818ZLY 4469694 ENCODE Processing Pipeline 03ef3cbb3fb149e90b9b0bd0f99b3e77 https://www.encodeproject.org/files/ENCFF083HDR/@@download/ENCFF083HDR.bed.gz hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF238JYT bed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF281OFW, ENCFF416BIN, ENCFF818ZLY, ENCFF899CBZ 5119994 ENCODE Processing Pipeline 3c1e7a83b4cdb58a9e95a2bee4ee8527 https://www.encodeproject.org/files/ENCFF238JYT/@@download/ENCFF238JYT.bed.gz hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF223PZJ bigBed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF507WAU 11160568 ENCODE Processing Pipeline 6b69d33900a4ed3a1893bbccd4f5a362 https://www.encodeproject.org/files/ENCFF223PZJ/@@download/ENCFF223PZJ.bigBed GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF067KHH bigBed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF083HDR 10112478 ENCODE Processing Pipeline 67918375dd125e4f28a2558cd30a8d01 https://www.encodeproject.org/files/ENCFF067KHH/@@download/ENCFF067KHH.bigBed hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF680VWB bigBed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF238JYT 11181429 ENCODE Processing Pipeline f031da6444c9db142886a60a8dbd7406 https://www.encodeproject.org/files/ENCFF680VWB/@@download/ENCFF680VWB.bigBed hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF859GUL bed narrowPeak conservative idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF083HDR, ENCFF238JYT, ENCFF518BAN 114600 ENCODE Processing Pipeline 1728913b9d4edae983ff10f874f832d8 https://www.encodeproject.org/files/ENCFF859GUL/@@download/ENCFF859GUL.bed.gz hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF894FDP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF701QXK 280518 ENCODE Processing Pipeline ba8d96a09ca396ada1f3d33ae4d8ad72 https://www.encodeproject.org/files/ENCFF894FDP/@@download/ENCFF894FDP.bigBed GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF016ITG bigBed narrowPeak peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF518BAN 5081093 ENCODE Processing Pipeline d9f551d5e0cbc0747b0c31d1742d8033 https://www.encodeproject.org/files/ENCFF016ITG/@@download/ENCFF016ITG.bigBed hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF310XNW bed narrowPeak conservative idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF274NLK, ENCFF277JBW, ENCFF419RSJ, ENCFF507WAU 121642 ENCODE Processing Pipeline 9cb9d27ea4aa1231aedfabb023389e3c https://www.encodeproject.org/files/ENCFF310XNW/@@download/ENCFF310XNW.bed.gz GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF633LAR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310XNW 260314 ENCODE Processing Pipeline 21765dd28396752614e5f86462107636 https://www.encodeproject.org/files/ENCFF633LAR/@@download/ENCFF633LAR.bigBed GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF701QXK bed narrowPeak optimal idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF274NLK, ENCFF277JBW, ENCFF419RSJ, ENCFF507WAU 141860 ENCODE Processing Pipeline 240ff17a5ab330385ccb93838dbe7fc6 https://www.encodeproject.org/files/ENCFF701QXK/@@download/ENCFF701QXK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF805GKD bed narrowPeak optimal idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF083HDR, ENCFF238JYT, ENCFF518BAN 139678 ENCODE Processing Pipeline f645df6ebe696a996c18451fce189d75 https://www.encodeproject.org/files/ENCFF805GKD/@@download/ENCFF805GKD.bed.gz hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF735UYL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF805GKD 278160 ENCODE Processing Pipeline 372a6c7a2c336aeb5d9bd841a3bd24e8 https://www.encodeproject.org/files/ENCFF735UYL/@@download/ENCFF735UYL.bigBed hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF615SEL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF859GUL 252062 ENCODE Processing Pipeline b526708852aab4ef0bf8e106b9f495ae https://www.encodeproject.org/files/ENCFF615SEL/@@download/ENCFF615SEL.bigBed hg19 released borderline replicate concordance, low read depth, mixed read lengths, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000QGB bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QGQ 1034304385 Richard Myers, HAIB e2a4864c92b7f58ac49a4435bdcdd634 https://www.encodeproject.org/files/ENCFF000QGB/@@download/ENCFF000QGB.bam hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QGC bigBed broadPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULD 66537 Richard Myers, HAIB c3242243dbfb6c2a23135d91c694192b https://www.encodeproject.org/files/ENCFF000QGC/@@download/ENCFF000QGC.bigBed hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QGD bigBed broadPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULE 172921 Richard Myers, HAIB 136794fbe5c47545f18fb31c146cc2a6 https://www.encodeproject.org/files/ENCFF000QGD/@@download/ENCFF000QGD.bigBed hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QGE bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QGN 363932617 Richard Myers, HAIB 02a526126c4c7670f80f74f491a67468 https://www.encodeproject.org/files/ENCFF000QGE/@@download/ENCFF000QGE.bam hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QGF bigWig raw signal ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 4020754 Richard Myers, HAIB 937a9c711b62943e1218d8051d48ae1c https://www.encodeproject.org/files/ENCFF000QGF/@@download/ENCFF000QGF.bigWig hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QGH bigWig raw signal ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 4435726 Richard Myers, HAIB a79c0776ca2a0ab099eb0b0f72afdced https://www.encodeproject.org/files/ENCFF000QGH/@@download/ENCFF000QGH.bigWig hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QGN fastq reads ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 353446396 Richard Myers, HAIB 70b6a0d835efbc73998c417acf047045 https://www.encodeproject.org/files/ENCFF000QGN/@@download/ENCFF000QGN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEZ/ released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QGQ fastq reads ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 947796572 Richard Myers, HAIB 357bbbe57c8b6eecacdf1d4199fc4d03 https://www.encodeproject.org/files/ENCFF000QGQ/@@download/ENCFF000QGQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001ULD bed broadPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 13516 Richard Myers, HAIB e8c341b2125d2fe5ab3407ac204d73a4 https://www.encodeproject.org/files/ENCFF001ULD/@@download/ENCFF001ULD.bed.gz hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001ULE bed broadPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 70059 Richard Myers, HAIB 947259a6b1a6f24d9fbfc54720926fd0 https://www.encodeproject.org/files/ENCFF001ULE/@@download/ENCFF001ULE.bed.gz hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF882JQN bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGN, ENCFF807MUK 213708414 ENCODE Processing Pipeline 2dbe6ff4702842a1a5052cdcff6f52df https://www.encodeproject.org/files/ENCFF882JQN/@@download/ENCFF882JQN.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF122HCH bam unfiltered alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGN, ENCFF807MUK 424775631 ENCODE Processing Pipeline 5a50e611f2235109774c054af8e900a3 https://www.encodeproject.org/files/ENCFF122HCH/@@download/ENCFF122HCH.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF798THM bam unfiltered alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGQ, ENCFF807MUK 1220682488 ENCODE Processing Pipeline 0306fb00a464403a5e8ee39c2875d742 https://www.encodeproject.org/files/ENCFF798THM/@@download/ENCFF798THM.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF037BXU bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGQ, ENCFF807MUK 817437214 ENCODE Processing Pipeline 98ac12c407f364c15953b862f5527a53 https://www.encodeproject.org/files/ENCFF037BXU/@@download/ENCFF037BXU.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF447EAV bam unfiltered alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGN, ENCFF643CGH 425480616 ENCODE Processing Pipeline 5d6b527c169a4de225d919ddf187c66c https://www.encodeproject.org/files/ENCFF447EAV/@@download/ENCFF447EAV.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF975VMQ bam unfiltered alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGQ, ENCFF643CGH 1223413566 ENCODE Processing Pipeline 4e8061bf2ceb9457a5d0ada21697a864 https://www.encodeproject.org/files/ENCFF975VMQ/@@download/ENCFF975VMQ.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF331BZT bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGQ, ENCFF643CGH 816973410 ENCODE Processing Pipeline ad615c734bfa775212b8b879156d577c https://www.encodeproject.org/files/ENCFF331BZT/@@download/ENCFF331BZT.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF584HKJ bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGN, ENCFF643CGH 213561783 ENCODE Processing Pipeline 0df6e10f43a11b0d1fa3fe7ce4420b43 https://www.encodeproject.org/files/ENCFF584HKJ/@@download/ENCFF584HKJ.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF132KHU bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 147552243 ENCODE Processing Pipeline afcac5cce3799208a62e175ea8d36f56 https://www.encodeproject.org/files/ENCFF132KHU/@@download/ENCFF132KHU.bigWig hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF521MOS bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM 4142355 ENCODE Processing Pipeline 585df9f882884542d2162608818d81f2 https://www.encodeproject.org/files/ENCFF521MOS/@@download/ENCFF521MOS.bed.gz hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF066ONU bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 1856755 ENCODE Processing Pipeline 14200e538b452e7bd169c4e2b53985d9 https://www.encodeproject.org/files/ENCFF066ONU/@@download/ENCFF066ONU.bed.gz hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF159FEQ bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 554208476 ENCODE Processing Pipeline 567849b363345bf98fef590b2a0a6613 https://www.encodeproject.org/files/ENCFF159FEQ/@@download/ENCFF159FEQ.bigWig hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF925ZXV bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 524903474 ENCODE Processing Pipeline 3ffc512294f3e569dbbfcb34a0a35285 https://www.encodeproject.org/files/ENCFF925ZXV/@@download/ENCFF925ZXV.bigWig hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF156JZC bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM 460370330 ENCODE Processing Pipeline afd19f0d8a598b0fcea80cc1b952f8b4 https://www.encodeproject.org/files/ENCFF156JZC/@@download/ENCFF156JZC.bigWig hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF532UAI bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 354267903 ENCODE Processing Pipeline b61aa107ff0ae0f60ff9110b582d7776 https://www.encodeproject.org/files/ENCFF532UAI/@@download/ENCFF532UAI.bigWig hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF869HHY bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM 421377279 ENCODE Processing Pipeline b70617e515668541493a75ceb7bea075 https://www.encodeproject.org/files/ENCFF869HHY/@@download/ENCFF869HHY.bigWig hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF738BIG bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 4610777 ENCODE Processing Pipeline 512ab31f7689df6e2e25d6ab153dd82b https://www.encodeproject.org/files/ENCFF738BIG/@@download/ENCFF738BIG.bed.gz hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF210ZAD bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF521MOS 10716873 ENCODE Processing Pipeline 31d751ffb046abb54ea787e444aa2951 https://www.encodeproject.org/files/ENCFF210ZAD/@@download/ENCFF210ZAD.bigBed hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF276CVA bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF066ONU 4132751 ENCODE Processing Pipeline 0699f128a11a625327164a5fc1d419d6 https://www.encodeproject.org/files/ENCFF276CVA/@@download/ENCFF276CVA.bigBed hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF077HFR bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF738BIG 11034124 ENCODE Processing Pipeline 773ba2104a8662238ca72551393e40c4 https://www.encodeproject.org/files/ENCFF077HFR/@@download/ENCFF077HFR.bigBed hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF221LXI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF615QOD 109039 ENCODE Processing Pipeline 4a54cbf898c147cc26d86ea66db3392d https://www.encodeproject.org/files/ENCFF221LXI/@@download/ENCFF221LXI.bigBed hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF785HDY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF033EBX 172518 ENCODE Processing Pipeline ac9527ac2cf07031564ead121ca00188 https://www.encodeproject.org/files/ENCFF785HDY/@@download/ENCFF785HDY.bigBed hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF615QOD bed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF066ONU, ENCFF521MOS, ENCFF738BIG 36527 ENCODE Processing Pipeline ecaec6d806ebba5fc4d05c9511f6de09 https://www.encodeproject.org/files/ENCFF615QOD/@@download/ENCFF615QOD.bed.gz hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF033EBX bed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF066ONU, ENCFF521MOS, ENCFF738BIG 62476 ENCODE Processing Pipeline 097bf841440b7b7f1ef9cb01097fd511 https://www.encodeproject.org/files/ENCFF033EBX/@@download/ENCFF033EBX.bed.gz hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF177MBE bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 1853408 ENCODE Processing Pipeline 6802e30d0f702fd8e080e71bed9e6948 https://www.encodeproject.org/files/ENCFF177MBE/@@download/ENCFF177MBE.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF089KFY bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF177MBE 4129064 ENCODE Processing Pipeline 1b9593a9849a7df78002795e505fecb3 https://www.encodeproject.org/files/ENCFF089KFY/@@download/ENCFF089KFY.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF247LOF bed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF123WWM, ENCFF177MBE, ENCFF419RSJ, ENCFF714RFQ 60929 ENCODE Processing Pipeline 58e643a89b9cf4aa01de67366da4a9be https://www.encodeproject.org/files/ENCFF247LOF/@@download/ENCFF247LOF.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF403VLX bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331BZT, ENCFF772PJM, ENCFF982BHL 551764967 ENCODE Processing Pipeline 1b0535fb4b9bfcc48a906bf751e3f668 https://www.encodeproject.org/files/ENCFF403VLX/@@download/ENCFF403VLX.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF092ZVO bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 412493701 ENCODE Processing Pipeline c01677b31526c5faeee58057842f3e97 https://www.encodeproject.org/files/ENCFF092ZVO/@@download/ENCFF092ZVO.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF303WVD bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 147008602 ENCODE Processing Pipeline 918164b7f04dfd95af08d88bd1379b67 https://www.encodeproject.org/files/ENCFF303WVD/@@download/ENCFF303WVD.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF587UWR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF247LOF 141467 ENCODE Processing Pipeline 09fab6d1653b393aa5a5b16ad86c53dc https://www.encodeproject.org/files/ENCFF587UWR/@@download/ENCFF587UWR.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF080COA bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331BZT, ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 523728649 ENCODE Processing Pipeline 5102bff166ec960622a2c1de8cc44c77 https://www.encodeproject.org/files/ENCFF080COA/@@download/ENCFF080COA.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF593FWV bed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF123WWM, ENCFF177MBE, ENCFF419RSJ, ENCFF714RFQ 36439 ENCODE Processing Pipeline c4ec33d07bf8e46483c6d78b023c6dd9 https://www.encodeproject.org/files/ENCFF593FWV/@@download/ENCFF593FWV.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF210EHW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF593FWV 109388 ENCODE Processing Pipeline d523c073b9620d7c9f8d94c3674cdac0 https://www.encodeproject.org/files/ENCFF210EHW/@@download/ENCFF210EHW.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF123WWM bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331BZT, ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 4599842 ENCODE Processing Pipeline fe2457bee3098b4961af1403df69948d https://www.encodeproject.org/files/ENCFF123WWM/@@download/ENCFF123WWM.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF852OMW bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331BZT, ENCFF772PJM, ENCFF982BHL 421506534 ENCODE Processing Pipeline 3e26319d2086a3e838a7b3c05cf04595 https://www.encodeproject.org/files/ENCFF852OMW/@@download/ENCFF852OMW.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF619NSR bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331BZT, ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 506357232 ENCODE Processing Pipeline ea7d68a7899e9e7f8f987ca47a7dc931 https://www.encodeproject.org/files/ENCFF619NSR/@@download/ENCFF619NSR.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF714RFQ bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331BZT, ENCFF772PJM, ENCFF982BHL 4138309 ENCODE Processing Pipeline 2fb0653961f0ac954538b731da4319ae https://www.encodeproject.org/files/ENCFF714RFQ/@@download/ENCFF714RFQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF071JUJ bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF714RFQ 10722308 ENCODE Processing Pipeline 5f2ad87465879810dfadf307cb4f67a1 https://www.encodeproject.org/files/ENCFF071JUJ/@@download/ENCFF071JUJ.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF633MBZ bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF123WWM 11022914 ENCODE Processing Pipeline fdd71968f0e4062bcce7575e89b07a46 https://www.encodeproject.org/files/ENCFF633MBZ/@@download/ENCFF633MBZ.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000PMG bam alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PMU 1178108429 Richard Myers, HAIB ad2b9a2da3eb2a56bfe7a625e9eabb0d https://www.encodeproject.org/files/ENCFF000PMG/@@download/ENCFF000PMG.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PMH bigBed broadPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UGY 228595 Richard Myers, HAIB 24c2594d7fcbd013cc1125ff1badd189 https://www.encodeproject.org/files/ENCFF000PMH/@@download/ENCFF000PMH.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PMI bigBed broadPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UGZ 514585 Richard Myers, HAIB 236620988b382a5ba5864bf03546b3f3 https://www.encodeproject.org/files/ENCFF000PMI/@@download/ENCFF000PMI.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PMJ bam alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PMV 1392396691 Richard Myers, HAIB b084a2aa9305df61a807ada4886f3f33 https://www.encodeproject.org/files/ENCFF000PMJ/@@download/ENCFF000PMJ.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PML bigWig raw signal ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 19811259 Richard Myers, HAIB ffd768c22ad012fb0a942cb988b7a54a https://www.encodeproject.org/files/ENCFF000PML/@@download/ENCFF000PML.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PMM bigWig raw signal ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 25164718 Richard Myers, HAIB 41696cc135b7f65061f10a3f53b0e284 https://www.encodeproject.org/files/ENCFF000PMM/@@download/ENCFF000PMM.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PMU fastq reads ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1270013695 Richard Myers, HAIB a58b41a102141fd362e964b68348fb28 https://www.encodeproject.org/files/ENCFF000PMU/@@download/ENCFF000PMU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PMV fastq reads ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1390578505 Richard Myers, HAIB c11d98927a491f30ff9954b8a3aadc3b https://www.encodeproject.org/files/ENCFF000PMV/@@download/ENCFF000PMV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UGY bed broadPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 106868 Richard Myers, HAIB b50c8975f6a297e6963dac58de128238 https://www.encodeproject.org/files/ENCFF001UGY/@@download/ENCFF001UGY.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UGZ bed broadPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 281869 Richard Myers, HAIB e53eb67c3ddf4b9437b8033046cc8889 https://www.encodeproject.org/files/ENCFF001UGZ/@@download/ENCFF001UGZ.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CKU bed narrowPeak optimal idr thresholded peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 279113 ENCODE Consortium Analysis Working Group 944de00024e32607ac280a63ed81b7c1 https://www.encodeproject.org/files/ENCFF002CKU/@@download/ENCFF002CKU.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF621FYU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE ENCFF002CKU 677763 ENCODE Consortium f12a86b8576d4a23384d82582455b0ef https://www.encodeproject.org/files/ENCFF621FYU/@@download/ENCFF621FYU.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF838HCN bam unfiltered alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PMV, ENCFF643CGH 1514365322 ENCODE Processing Pipeline 4f338d0ecf96ddc0f3b30fb627a4f184 https://www.encodeproject.org/files/ENCFF838HCN/@@download/ENCFF838HCN.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF701RBP bam alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PMV, ENCFF643CGH 796098153 ENCODE Processing Pipeline 4a5d2d65441da0b8ea6462e5417e3b2c https://www.encodeproject.org/files/ENCFF701RBP/@@download/ENCFF701RBP.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF821FMV bam unfiltered alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PMU, ENCFF643CGH 1535213378 ENCODE Processing Pipeline b6f14c6821f40787aba01e2e4c29d688 https://www.encodeproject.org/files/ENCFF821FMV/@@download/ENCFF821FMV.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF833ZLA bam alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PMU, ENCFF643CGH 875151189 ENCODE Processing Pipeline f9064428cabb0d986a554e3762cc0afe https://www.encodeproject.org/files/ENCFF833ZLA/@@download/ENCFF833ZLA.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF956DQX bam unfiltered alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PMV, ENCFF807MUK 1508254242 ENCODE Processing Pipeline c623861799d99482e6770f0c94743583 https://www.encodeproject.org/files/ENCFF956DQX/@@download/ENCFF956DQX.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF547MVS bam alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PMU, ENCFF807MUK 875389378 ENCODE Processing Pipeline 1802be265a2b056999cb7e0aabb57e68 https://www.encodeproject.org/files/ENCFF547MVS/@@download/ENCFF547MVS.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF940PTC bam unfiltered alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PMU, ENCFF807MUK 1531007824 ENCODE Processing Pipeline 80d2c0d95432186f900d320fa1152087 https://www.encodeproject.org/files/ENCFF940PTC/@@download/ENCFF940PTC.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF966SKB bam alignments ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PMV, ENCFF807MUK 796409962 ENCODE Processing Pipeline bd19d90f8c1122a3fac4e6df5bb6c4a6 https://www.encodeproject.org/files/ENCFF966SKB/@@download/ENCFF966SKB.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF563UVW bigWig signal p-value ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF175NMQ, ENCFF833ZLA 534356641 ENCODE Processing Pipeline 9bf985829df1e9f7c9c6e70c2e82d49d https://www.encodeproject.org/files/ENCFF563UVW/@@download/ENCFF563UVW.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF133MZD bigWig signal p-value ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF701RBP 477436815 ENCODE Processing Pipeline 0064cdeb64425ea0a84ba56a984c0689 https://www.encodeproject.org/files/ENCFF133MZD/@@download/ENCFF133MZD.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF973MOX bigWig signal p-value ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF175NMQ, ENCFF701RBP, ENCFF833ZLA 574585896 ENCODE Processing Pipeline 7d15d40d823f9cec5169aef76fb2d4c0 https://www.encodeproject.org/files/ENCFF973MOX/@@download/ENCFF973MOX.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF368RHF bigWig fold change over control ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF175NMQ, ENCFF833ZLA 427737094 ENCODE Processing Pipeline 11c1cea761117aba83f316c5016d0af0 https://www.encodeproject.org/files/ENCFF368RHF/@@download/ENCFF368RHF.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF951NOF bigWig fold change over control ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF701RBP 398923440 ENCODE Processing Pipeline 0815ded1bcdb3202dfd4db74d7525ccd https://www.encodeproject.org/files/ENCFF951NOF/@@download/ENCFF951NOF.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF352HRD bigWig fold change over control ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF175NMQ, ENCFF701RBP, ENCFF833ZLA 683562466 ENCODE Processing Pipeline 014caa8dc4aa113523d976c3aeb0171c https://www.encodeproject.org/files/ENCFF352HRD/@@download/ENCFF352HRD.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF692HFF bed narrowPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF701RBP 4998763 ENCODE Processing Pipeline 4c120559fa9e1063507a14cf3162deeb https://www.encodeproject.org/files/ENCFF692HFF/@@download/ENCFF692HFF.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF569YRX bed narrowPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF175NMQ, ENCFF833ZLA 4619693 ENCODE Processing Pipeline 024cee667f1d71c2bd21f0108c0e498e https://www.encodeproject.org/files/ENCFF569YRX/@@download/ENCFF569YRX.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF272WMM bed narrowPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF175NMQ, ENCFF701RBP, ENCFF833ZLA 5518961 ENCODE Processing Pipeline 75aee0b4941b55cb2962313da67dc6f6 https://www.encodeproject.org/files/ENCFF272WMM/@@download/ENCFF272WMM.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF026CEI bigBed narrowPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF692HFF 11058751 ENCODE Processing Pipeline a3cddf999ff4491b1b35f4e636e5b09a https://www.encodeproject.org/files/ENCFF026CEI/@@download/ENCFF026CEI.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF251KPA bigBed narrowPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF569YRX 11034531 ENCODE Processing Pipeline 4bfe5b80ee44cd059ebf7059a405f6d9 https://www.encodeproject.org/files/ENCFF251KPA/@@download/ENCFF251KPA.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF414UCJ bigBed narrowPeak peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF272WMM 11428887 ENCODE Processing Pipeline d4705f6a628959521d43bf4b89f070a4 https://www.encodeproject.org/files/ENCFF414UCJ/@@download/ENCFF414UCJ.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF271PYC bed narrowPeak conservative idr thresholded peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF272WMM, ENCFF419RSJ, ENCFF569YRX, ENCFF692HFF 211140 ENCODE Processing Pipeline 970a5042a7c5b8f859f9e54b815cb013 https://www.encodeproject.org/files/ENCFF271PYC/@@download/ENCFF271PYC.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF237RQQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF271PYC 458881 ENCODE Processing Pipeline 96e87e046935b1d51f1eb05df99a6fae https://www.encodeproject.org/files/ENCFF237RQQ/@@download/ENCFF237RQQ.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF592BGO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF669XCW 580214 ENCODE Processing Pipeline a5a532015a61428deec49ea313070cf9 https://www.encodeproject.org/files/ENCFF592BGO/@@download/ENCFF592BGO.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF669XCW bed narrowPeak optimal idr thresholded peaks ENCSR000BOT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF272WMM, ENCFF419RSJ, ENCFF569YRX, ENCFF692HFF 294770 ENCODE Processing Pipeline d6a67def37af3f120b62de5a633ffead https://www.encodeproject.org/files/ENCFF669XCW/@@download/ENCFF669XCW.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF557MVE fastq reads ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 1 50 single-ended 1181960620 Richard Myers, HAIB 0a82e6214892de4a270f66672470ac4e SRA:SRR5339498 https://www.encodeproject.org/files/ENCFF557MVE/@@download/ENCFF557MVE.fastq.gz HiSeq 2000 /files/ENCFF564XPO/ released antibody characterized with exemption biological replicates with identical biosample ENCFF450YAP fastq reads ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 1 50 single-ended 1285686141 Richard Myers, HAIB 7e75f2285935343e962e939e6209723e SRA:SRR5339497 https://www.encodeproject.org/files/ENCFF450YAP/@@download/ENCFF450YAP.fastq.gz HiSeq 2000 /files/ENCFF963TEZ/ released antibody characterized with exemption biological replicates with identical biosample ENCFF875YSN bam unfiltered alignments ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 50 ENCFF557MVE, ENCFF807MUK 1272648537 ENCODE Processing Pipeline 46d2f62ab29520bbd855d73a0e422b1a https://www.encodeproject.org/files/ENCFF875YSN/@@download/ENCFF875YSN.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF448PLJ bam unfiltered alignments ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 50 ENCFF557MVE, ENCFF643CGH 1274638165 ENCODE Processing Pipeline c6898d89e47c5595707319d44b7dd19f https://www.encodeproject.org/files/ENCFF448PLJ/@@download/ENCFF448PLJ.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF994LQW bam alignments ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 50 ENCFF450YAP, ENCFF807MUK 1027060412 ENCODE Processing Pipeline 9fc8e64cf3d18d575a4bf25fa3cc2866 https://www.encodeproject.org/files/ENCFF994LQW/@@download/ENCFF994LQW.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF568JWW bam alignments ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 50 ENCFF557MVE, ENCFF807MUK 978807838 ENCODE Processing Pipeline 42b0281e81d54d9a63754c5eb63d018a https://www.encodeproject.org/files/ENCFF568JWW/@@download/ENCFF568JWW.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF912DCK bam unfiltered alignments ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 50 ENCFF450YAP, ENCFF643CGH 1346925100 ENCODE Processing Pipeline b9df84b754bb98c31d060d40c8f0f941 https://www.encodeproject.org/files/ENCFF912DCK/@@download/ENCFF912DCK.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF596BCZ bam alignments ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 50 ENCFF557MVE, ENCFF643CGH 978845127 ENCODE Processing Pipeline 3674f191d445bc3e4a5cf865719800a4 https://www.encodeproject.org/files/ENCFF596BCZ/@@download/ENCFF596BCZ.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF594YKY bam unfiltered alignments ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 50 ENCFF450YAP, ENCFF807MUK 1345294064 ENCODE Processing Pipeline de9a8f35e9f8a2261dfe0e05c5d90573 https://www.encodeproject.org/files/ENCFF594YKY/@@download/ENCFF594YKY.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF091YVC bam alignments ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 50 ENCFF450YAP, ENCFF643CGH 1027036560 ENCODE Processing Pipeline 78021f729889e824d12bd0a51f6c0c93 https://www.encodeproject.org/files/ENCFF091YVC/@@download/ENCFF091YVC.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF509KUY bigWig signal p-value ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 ENCFF568JWW, ENCFF829HKP, ENCFF876ZSM 702226874 ENCODE Processing Pipeline c10f040107367b31ff0f0402f1286dd3 https://www.encodeproject.org/files/ENCFF509KUY/@@download/ENCFF509KUY.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF315GNC bigBed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 ENCFF142WNN 12899158 ENCODE Processing Pipeline ddd347bd9df5e632849f5281acf1b3ae https://www.encodeproject.org/files/ENCFF315GNC/@@download/ENCFF315GNC.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF945IWI bigWig signal p-value ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 ENCFF876ZSM, ENCFF994LQW 481000405 ENCODE Processing Pipeline c8c6bdf797d9c7c8717e207b55ee6f74 https://www.encodeproject.org/files/ENCFF945IWI/@@download/ENCFF945IWI.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF142WNN bed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 ENCFF876ZSM, ENCFF994LQW 6253188 ENCODE Processing Pipeline 4f226b6cef40ff1c97d42b6fe5b8cfdf https://www.encodeproject.org/files/ENCFF142WNN/@@download/ENCFF142WNN.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF371IUU bigBed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 ENCFF494HET 13072201 ENCODE Processing Pipeline c581a4128f54b60c2ae2c647659b77fc https://www.encodeproject.org/files/ENCFF371IUU/@@download/ENCFF371IUU.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF109RQV bed narrowPeak conservative idr thresholded peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF142WNN, ENCFF342UVO, ENCFF494HET 759979 ENCODE Processing Pipeline 18a46bec27819d812cae6410be10dd9a https://www.encodeproject.org/files/ENCFF109RQV/@@download/ENCFF109RQV.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF701CDH bigWig fold change over control ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 ENCFF568JWW, ENCFF829HKP, ENCFF876ZSM 541076136 ENCODE Processing Pipeline 9064f2f4fd5ef1c173afd446c43394d7 https://www.encodeproject.org/files/ENCFF701CDH/@@download/ENCFF701CDH.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF494HET bed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 ENCFF568JWW, ENCFF829HKP, ENCFF876ZSM 6338679 ENCODE Processing Pipeline 64d58df1142ed1b7e9639e7afeaf50a6 https://www.encodeproject.org/files/ENCFF494HET/@@download/ENCFF494HET.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF342UVO bed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF568JWW, ENCFF829HKP, ENCFF876ZSM, ENCFF994LQW 6893084 ENCODE Processing Pipeline b2c44c494bdfaa7024b07593cf66c22b https://www.encodeproject.org/files/ENCFF342UVO/@@download/ENCFF342UVO.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF279DYD bigBed narrowPeak conservative idr thresholded peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF109RQV 1580171 ENCODE Processing Pipeline ebf621bba01acd2d4c629fa54737d47e https://www.encodeproject.org/files/ENCFF279DYD/@@download/ENCFF279DYD.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF943FWM bigWig signal p-value ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF568JWW, ENCFF829HKP, ENCFF876ZSM, ENCFF994LQW 900523776 ENCODE Processing Pipeline 34ac701556a8c6a8e4d20a24f1436a6a https://www.encodeproject.org/files/ENCFF943FWM/@@download/ENCFF943FWM.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF285UTG bigWig fold change over control ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 ENCFF876ZSM, ENCFF994LQW 432780783 ENCODE Processing Pipeline 31e08bfc98dc95c478eb114d0b35e272 https://www.encodeproject.org/files/ENCFF285UTG/@@download/ENCFF285UTG.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF602CSC bigBed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF342UVO 13050155 ENCODE Processing Pipeline 7770bc93cce86cda9bb42a646053993c https://www.encodeproject.org/files/ENCFF602CSC/@@download/ENCFF602CSC.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF910BJG bigBed narrowPeak optimal idr thresholded peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF476TIZ 1662803 ENCODE Processing Pipeline 7547d27846a7f1947e0609ec0435a1d3 https://www.encodeproject.org/files/ENCFF910BJG/@@download/ENCFF910BJG.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF122IVA bigWig fold change over control ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF568JWW, ENCFF829HKP, ENCFF876ZSM, ENCFF994LQW 886753018 ENCODE Processing Pipeline 474d1c097410ba6f88df8e2738607e3b https://www.encodeproject.org/files/ENCFF122IVA/@@download/ENCFF122IVA.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF476TIZ bed narrowPeak optimal idr thresholded peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF142WNN, ENCFF342UVO, ENCFF494HET 814178 ENCODE Processing Pipeline 074d9fbb58b000a0b57810f7030046fa https://www.encodeproject.org/files/ENCFF476TIZ/@@download/ENCFF476TIZ.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF954CTO bigWig signal p-value ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 ENCFF091YVC, ENCFF802YSD 480903342 ENCODE Processing Pipeline e2bfa39f1c09e51cd2b25ee2a7aea53c https://www.encodeproject.org/files/ENCFF954CTO/@@download/ENCFF954CTO.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF259EKX bigWig signal p-value ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF091YVC, ENCFF389HKQ, ENCFF596BCZ, ENCFF802YSD 900253783 ENCODE Processing Pipeline f5569a92b899d5330cc2d140d94d1064 https://www.encodeproject.org/files/ENCFF259EKX/@@download/ENCFF259EKX.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF549CNS bigWig signal p-value ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 ENCFF389HKQ, ENCFF596BCZ, ENCFF802YSD 654016629 ENCODE Processing Pipeline 070dad03da474f4fc65789ddee057293 https://www.encodeproject.org/files/ENCFF549CNS/@@download/ENCFF549CNS.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF387VYF bigWig fold change over control ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 ENCFF389HKQ, ENCFF596BCZ, ENCFF802YSD 540920508 ENCODE Processing Pipeline 7c87f5666250682d83c01000c4635d43 https://www.encodeproject.org/files/ENCFF387VYF/@@download/ENCFF387VYF.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF348SHM bigWig fold change over control ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 ENCFF091YVC, ENCFF802YSD 433498043 ENCODE Processing Pipeline b5770440f1e2088bed81ad95241ffcf5 https://www.encodeproject.org/files/ENCFF348SHM/@@download/ENCFF348SHM.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF912TKR bigWig fold change over control ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF091YVC, ENCFF389HKQ, ENCFF596BCZ, ENCFF802YSD 886930765 ENCODE Processing Pipeline 1e9e912392e9457f654796463b43b872 https://www.encodeproject.org/files/ENCFF912TKR/@@download/ENCFF912TKR.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF678VRH bed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 ENCFF389HKQ, ENCFF596BCZ, ENCFF802YSD 6148504 ENCODE Processing Pipeline 7f3652dce7a3345cefc71ed13df3faae https://www.encodeproject.org/files/ENCFF678VRH/@@download/ENCFF678VRH.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF042CMN bed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF091YVC, ENCFF389HKQ, ENCFF596BCZ, ENCFF802YSD 6837418 ENCODE Processing Pipeline 184017cf54addb62d7c595abe15b7789 https://www.encodeproject.org/files/ENCFF042CMN/@@download/ENCFF042CMN.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF272ECF bigBed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 ENCFF523QCL 12925577 ENCODE Processing Pipeline a7874754e0cd8b807ae0bb83486ffa0c https://www.encodeproject.org/files/ENCFF272ECF/@@download/ENCFF272ECF.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF523QCL bed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 2 ENCFF091YVC, ENCFF802YSD 6107111 ENCODE Processing Pipeline 8743701e1736a366d44a71e2554336bd https://www.encodeproject.org/files/ENCFF523QCL/@@download/ENCFF523QCL.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF095RVV bigBed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1 ENCFF678VRH 13001006 ENCODE Processing Pipeline ee9b42205b2a48c86c9c72a96639f210 https://www.encodeproject.org/files/ENCFF095RVV/@@download/ENCFF095RVV.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF188IVF bigBed narrowPeak peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF042CMN 13055518 ENCODE Processing Pipeline 8f8678508240aec7d59de6271a8add05 https://www.encodeproject.org/files/ENCFF188IVF/@@download/ENCFF188IVF.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF953CWR bigBed narrowPeak conservative idr thresholded peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF336GTB 1582819 ENCODE Processing Pipeline 3e812b0675076039b80bf683cf55e82e https://www.encodeproject.org/files/ENCFF953CWR/@@download/ENCFF953CWR.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF336GTB bed narrowPeak conservative idr thresholded peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF042CMN, ENCFF419RSJ, ENCFF523QCL, ENCFF678VRH 761389 ENCODE Processing Pipeline ba36bd012b6e4cb938532a2188ee91aa https://www.encodeproject.org/files/ENCFF336GTB/@@download/ENCFF336GTB.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF730DVC bed narrowPeak optimal idr thresholded peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF042CMN, ENCFF419RSJ, ENCFF523QCL, ENCFF678VRH 817975 ENCODE Processing Pipeline c4b102a6c7534b35aca4e787589dabd0 https://www.encodeproject.org/files/ENCFF730DVC/@@download/ENCFF730DVC.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF897BDB bigBed narrowPeak optimal idr thresholded peaks ENCSR889GGV ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate POLR2AphosphoS5-human ENCAB000AOD DNA False 2016-10-12 ENCODE 1, 2 ENCFF730DVC 1668368 ENCODE Processing Pipeline 67a26d89576e90a2aaa7249d8d263581 https://www.encodeproject.org/files/ENCFF897BDB/@@download/ENCFF897BDB.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF000PDF bam alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PDQ 349172337 Richard Myers, HAIB 8c0bfd3f17d1dd75d0f45c9cc8069e75 https://www.encodeproject.org/files/ENCFF000PDF/@@download/ENCFF000PDF.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDG bigBed broadPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UES 220684 Richard Myers, HAIB a893cc8ffc12c007f8400eb8cb16fde9 https://www.encodeproject.org/files/ENCFF000PDG/@@download/ENCFF000PDG.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDH bigBed broadPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UET 736905 Richard Myers, HAIB 454188d478b4f573a3ea719897ce4cdc https://www.encodeproject.org/files/ENCFF000PDH/@@download/ENCFF000PDH.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDI bam alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PDT 761132159 Richard Myers, HAIB 8ab64615ced153cc0b4e2cd3ee839e4c https://www.encodeproject.org/files/ENCFF000PDI/@@download/ENCFF000PDI.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDK bigWig raw signal ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 4896978 Richard Myers, HAIB 6611b7f7c811f8e00dbbc1e327f9b103 https://www.encodeproject.org/files/ENCFF000PDK/@@download/ENCFF000PDK.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDM bigWig raw signal ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 20982343 Richard Myers, HAIB 703a6d8caf4936a142067e55bc012aa4 https://www.encodeproject.org/files/ENCFF000PDM/@@download/ENCFF000PDM.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDQ fastq reads ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 362382627 Richard Myers, HAIB e4f69995143dd464b4dd27b50f632498 https://www.encodeproject.org/files/ENCFF000PDQ/@@download/ENCFF000PDQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PBO/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDT fastq reads ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 817464381 Richard Myers, HAIB 6144ef9b267b010070f8ab7761e792ba https://www.encodeproject.org/files/ENCFF000PDT/@@download/ENCFF000PDT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PBO/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UES bed broadPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 100586 Richard Myers, HAIB f360cb39cd0c3b44d7adf67448bf2b49 https://www.encodeproject.org/files/ENCFF001UES/@@download/ENCFF001UES.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UET bed broadPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 442848 Richard Myers, HAIB 724d74fe93aeea7be810924b5b781048 https://www.encodeproject.org/files/ENCFF001UET/@@download/ENCFF001UET.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF002CJV bed narrowPeak optimal idr thresholded peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 247408 ENCODE Consortium Analysis Working Group 8434fd1558c6032c05a432d7ee3200d0 https://www.encodeproject.org/files/ENCFF002CJV/@@download/ENCFF002CJV.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF126PXE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE ENCFF002CJV 503869 ENCODE Consortium a4eb0c98aef339498e28229ffa5f04d5 https://www.encodeproject.org/files/ENCFF126PXE/@@download/ENCFF126PXE.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF952ERD bam unfiltered alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PDQ, ENCFF643CGH 427213372 ENCODE Processing Pipeline 415a4add52a1eae772b1b5dc31bb7dfd https://www.encodeproject.org/files/ENCFF952ERD/@@download/ENCFF952ERD.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF495REE bam alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PDQ, ENCFF643CGH 175700021 ENCODE Processing Pipeline 38689202fcfed21a90fb62d6d378b9f7 https://www.encodeproject.org/files/ENCFF495REE/@@download/ENCFF495REE.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF529MCR bam unfiltered alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PDT, ENCFF643CGH 941935539 ENCODE Processing Pipeline dbc92315fd00e4bc9a449afea421c760 https://www.encodeproject.org/files/ENCFF529MCR/@@download/ENCFF529MCR.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF970MPK bam alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PDT, ENCFF643CGH 454642094 ENCODE Processing Pipeline 944391b491b2a796cf5fc51f75fbba38 https://www.encodeproject.org/files/ENCFF970MPK/@@download/ENCFF970MPK.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF438ILJ bam alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PDQ, ENCFF807MUK 175748470 ENCODE Processing Pipeline 6c6b6f47b7f45e2ead04acb1e9121a1c https://www.encodeproject.org/files/ENCFF438ILJ/@@download/ENCFF438ILJ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF779LNN bam unfiltered alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PDQ, ENCFF807MUK 426211010 ENCODE Processing Pipeline 69b97e381013a59988b8400154705796 https://www.encodeproject.org/files/ENCFF779LNN/@@download/ENCFF779LNN.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF370WTZ bam unfiltered alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PDT, ENCFF807MUK 940498325 ENCODE Processing Pipeline b253409f6bdbc548052d74722fd0a995 https://www.encodeproject.org/files/ENCFF370WTZ/@@download/ENCFF370WTZ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF995SMP bam alignments ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PDT, ENCFF807MUK 454638187 ENCODE Processing Pipeline 7f63b87c00c33f9a12b9e68b8813afbb https://www.encodeproject.org/files/ENCFF995SMP/@@download/ENCFF995SMP.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF019CWM bigWig signal p-value ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF495REE, ENCFF769ESE 373988578 ENCODE Processing Pipeline f7775696287da059aaaf97d22894f7a6 https://www.encodeproject.org/files/ENCFF019CWM/@@download/ENCFF019CWM.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF076EQW bigWig signal p-value ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF769ESE, ENCFF970MPK 409099276 ENCODE Processing Pipeline de3730072882ca9dd88b281894d17bc0 https://www.encodeproject.org/files/ENCFF076EQW/@@download/ENCFF076EQW.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF395COC bigWig fold change over control ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF495REE, ENCFF769ESE 105642429 ENCODE Processing Pipeline 1b8f2e6dd95e016f1b6f08716886e123 https://www.encodeproject.org/files/ENCFF395COC/@@download/ENCFF395COC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF708LPD bigWig signal p-value ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF495REE, ENCFF769ESE, ENCFF970MPK 455982134 ENCODE Processing Pipeline 6cb71a057c7d2def3944f115b5ef1c28 https://www.encodeproject.org/files/ENCFF708LPD/@@download/ENCFF708LPD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF466CKA bigWig fold change over control ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF769ESE, ENCFF970MPK 243108913 ENCODE Processing Pipeline d5fcd7eebacdc6a89f288620f4c83bcd https://www.encodeproject.org/files/ENCFF466CKA/@@download/ENCFF466CKA.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF215SED bed narrowPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF769ESE, ENCFF970MPK 4588381 ENCODE Processing Pipeline d4cc0824b6f82b9c824bb3e88bcd8437 https://www.encodeproject.org/files/ENCFF215SED/@@download/ENCFF215SED.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF414PNA bigBed narrowPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF215SED 10424668 ENCODE Processing Pipeline 8e16f00da84568d9f95992d47cf021e8 https://www.encodeproject.org/files/ENCFF414PNA/@@download/ENCFF414PNA.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF293WBY bigWig fold change over control ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF495REE, ENCFF769ESE, ENCFF970MPK 321370720 ENCODE Processing Pipeline 3b332320a47eb251343347558dd64a7d https://www.encodeproject.org/files/ENCFF293WBY/@@download/ENCFF293WBY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF334GBG bed narrowPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF495REE, ENCFF769ESE 1735619 ENCODE Processing Pipeline 72fb467b3c1302ccf452ae624248dfc5 https://www.encodeproject.org/files/ENCFF334GBG/@@download/ENCFF334GBG.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF255USI bigBed narrowPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334GBG 3841776 ENCODE Processing Pipeline c582148e2ec1e98a1e9b9ce668e183ea https://www.encodeproject.org/files/ENCFF255USI/@@download/ENCFF255USI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF323NFA bed narrowPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF495REE, ENCFF769ESE, ENCFF970MPK 4876257 ENCODE Processing Pipeline 71983303b2606e0c1e6b3142a26a2813 https://www.encodeproject.org/files/ENCFF323NFA/@@download/ENCFF323NFA.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF059VZM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF279EVE 256049 ENCODE Processing Pipeline ec88f678e25bfbe1b80fc84cdf5fcbb1 https://www.encodeproject.org/files/ENCFF059VZM/@@download/ENCFF059VZM.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF094BQZ bed narrowPeak optimal idr thresholded peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF215SED, ENCFF323NFA, ENCFF334GBG, ENCFF419RSJ 298740 ENCODE Processing Pipeline cfe7eb3e28f5d85b466b75bc7037aba9 https://www.encodeproject.org/files/ENCFF094BQZ/@@download/ENCFF094BQZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF279EVE bed narrowPeak conservative idr thresholded peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF215SED, ENCFF323NFA, ENCFF334GBG, ENCFF419RSJ 122383 ENCODE Processing Pipeline 7080462e833c3da8f901c3d79a2404ed https://www.encodeproject.org/files/ENCFF279EVE/@@download/ENCFF279EVE.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF572MCA bigBed narrowPeak peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF323NFA 10807158 ENCODE Processing Pipeline 47416182bdc0c3817b13815cef6dc2c5 https://www.encodeproject.org/files/ENCFF572MCA/@@download/ENCFF572MCA.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF225RRD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNX ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF094BQZ 582392 ENCODE Processing Pipeline d00fdc0c0a3528e3c57afbd7a40b4f38 https://www.encodeproject.org/files/ENCFF225RRD/@@download/ENCFF225RRD.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000OED bam alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OEQ 892226157 Richard Myers, HAIB aeada3abce8cc57c075fb31069080ca0 https://www.encodeproject.org/files/ENCFF000OED/@@download/ENCFF000OED.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF000OEE bigBed broadPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TYW 171687 Richard Myers, HAIB 456fd498a4b20e093d89b62441e2947d https://www.encodeproject.org/files/ENCFF000OEE/@@download/ENCFF000OEE.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF000OEF bam alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OEP 819155193 Richard Myers, HAIB 119f2cf5aec82dbe306c1b609b6d77a2 https://www.encodeproject.org/files/ENCFF000OEF/@@download/ENCFF000OEF.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF000OEG bigBed broadPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TYX 281118 Richard Myers, HAIB bd3c29a2485e1ec120eeb68e320e53b7 https://www.encodeproject.org/files/ENCFF000OEG/@@download/ENCFF000OEG.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF000OEI bigWig raw signal ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 22559761 Richard Myers, HAIB a28ec90d8829c39f3b9103b44922db7f https://www.encodeproject.org/files/ENCFF000OEI/@@download/ENCFF000OEI.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF000OEK bigWig raw signal ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 22696639 Richard Myers, HAIB 17b526ddaf54334e80c0871d59ae8936 https://www.encodeproject.org/files/ENCFF000OEK/@@download/ENCFF000OEK.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF000OEP fastq reads ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1123721883 Richard Myers, HAIB aa75c9e8271ce2b71c2943ead853c9b9 https://www.encodeproject.org/files/ENCFF000OEP/@@download/ENCFF000OEP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF000OEQ fastq reads ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1470421057 Richard Myers, HAIB 949de3ab0f232844e8bd56876ee612fb https://www.encodeproject.org/files/ENCFF000OEQ/@@download/ENCFF000OEQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF001TYW bed broadPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 72035 Richard Myers, HAIB af0609261bb0e9fb86044137c1eb6b74 https://www.encodeproject.org/files/ENCFF001TYW/@@download/ENCFF001TYW.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF001TYX bed broadPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 113392 Richard Myers, HAIB 35f89ef2f247fddc9d82ba3728a3da0c https://www.encodeproject.org/files/ENCFF001TYX/@@download/ENCFF001TYX.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF002CHU bed narrowPeak optimal idr thresholded peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 99895 ENCODE Consortium Analysis Working Group c85b1e6990282d9fb581b19de053c875 https://www.encodeproject.org/files/ENCFF002CHU/@@download/ENCFF002CHU.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF254RCY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE ENCFF002CHU 280402 ENCODE Consortium 8c55a7078cf699ec072484fbbb9c1cdf https://www.encodeproject.org/files/ENCFF254RCY/@@download/ENCFF254RCY.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF915GLM bam unfiltered alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OEP, ENCFF643CGH 1312498846 ENCODE Processing Pipeline 8af36b5b7eee492b431ce960f37a85e1 https://www.encodeproject.org/files/ENCFF915GLM/@@download/ENCFF915GLM.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF707RRY bam alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OEP, ENCFF643CGH 437501433 ENCODE Processing Pipeline df57856fa6dc8dfbea8eb865eb2b5a21 https://www.encodeproject.org/files/ENCFF707RRY/@@download/ENCFF707RRY.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF561EJD bam unfiltered alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OEQ, ENCFF643CGH 1719361830 ENCODE Processing Pipeline 9d8785b29a06e79d38e44cfe064a69b2 https://www.encodeproject.org/files/ENCFF561EJD/@@download/ENCFF561EJD.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF971KJA bam alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OEQ, ENCFF643CGH 499355998 ENCODE Processing Pipeline 468a98865066dc01460b7b47aa4acaa3 https://www.encodeproject.org/files/ENCFF971KJA/@@download/ENCFF971KJA.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF549IYK bam unfiltered alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OEP, ENCFF807MUK 1320019291 ENCODE Processing Pipeline db21038167e30341f11a987972172ec1 https://www.encodeproject.org/files/ENCFF549IYK/@@download/ENCFF549IYK.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF797IAR bam alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OEP, ENCFF807MUK 431191759 ENCODE Processing Pipeline 24203cd7cd0e3c4610b17fba128869fd https://www.encodeproject.org/files/ENCFF797IAR/@@download/ENCFF797IAR.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF579QFZ bam unfiltered alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OEQ, ENCFF807MUK 1717382506 ENCODE Processing Pipeline 73005236c9d3fb4357f0cf20a4b63aba https://www.encodeproject.org/files/ENCFF579QFZ/@@download/ENCFF579QFZ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF060XMV bam alignments ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OEQ, ENCFF807MUK 492749729 ENCODE Processing Pipeline 88eba33a2c5c1b551d5388e818528b52 https://www.encodeproject.org/files/ENCFF060XMV/@@download/ENCFF060XMV.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF511YCS bigWig signal p-value ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF707RRY, ENCFF971KJA 724685886 ENCODE Processing Pipeline ae72d2a66dbcde4b4ccb87f3398f25c9 https://www.encodeproject.org/files/ENCFF511YCS/@@download/ENCFF511YCS.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF464JUI bigWig fold change over control ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF707RRY 242483206 ENCODE Processing Pipeline 0a036e550e70470c9019fa8d3a162e34 https://www.encodeproject.org/files/ENCFF464JUI/@@download/ENCFF464JUI.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF516YJI bigWig signal p-value ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF707RRY 393998565 ENCODE Processing Pipeline 77e4c1d42fc7a9d6d4274e01a7c9c291 https://www.encodeproject.org/files/ENCFF516YJI/@@download/ENCFF516YJI.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF256QZB bigWig signal p-value ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF971KJA 429456870 ENCODE Processing Pipeline 365578239fdd730acfaaf994ffeaff5a https://www.encodeproject.org/files/ENCFF256QZB/@@download/ENCFF256QZB.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF916XGL bigWig fold change over control ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF707RRY, ENCFF971KJA 566890076 ENCODE Processing Pipeline 46ac46ea811b297c859bd5e7b8f57c24 https://www.encodeproject.org/files/ENCFF916XGL/@@download/ENCFF916XGL.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF968RDY bigBed narrowPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF237JOK 11300610 ENCODE Processing Pipeline 698228ca8e52b33d2f930b50e9859422 https://www.encodeproject.org/files/ENCFF968RDY/@@download/ENCFF968RDY.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF233IWJ bed narrowPeak conservative idr thresholded peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF205XAJ, ENCFF237JOK, ENCFF419RSJ, ENCFF736XQD 74869 ENCODE Processing Pipeline dd9f0df797ed5c259ae7b275edf8ceec https://www.encodeproject.org/files/ENCFF233IWJ/@@download/ENCFF233IWJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF358GKL bigWig fold change over control ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF971KJA 247104097 ENCODE Processing Pipeline 1b93d9300641bf92ac3bfb9b4918aba9 https://www.encodeproject.org/files/ENCFF358GKL/@@download/ENCFF358GKL.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF205XAJ bed narrowPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF707RRY 3559698 ENCODE Processing Pipeline d382d68d0f2e935d0d8f7f0f311131bd https://www.encodeproject.org/files/ENCFF205XAJ/@@download/ENCFF205XAJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF502LCC bigBed narrowPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF205XAJ 7799825 ENCODE Processing Pipeline cb5a5f064e5a728c3e01413e377fddef https://www.encodeproject.org/files/ENCFF502LCC/@@download/ENCFF502LCC.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF321JQN bigBed narrowPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF736XQD 9965829 ENCODE Processing Pipeline 97d098defc0948a7fb14a3d9b1d3c8fd https://www.encodeproject.org/files/ENCFF321JQN/@@download/ENCFF321JQN.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF864TFH bed narrowPeak optimal idr thresholded peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF205XAJ, ENCFF237JOK, ENCFF419RSJ, ENCFF736XQD 94660 ENCODE Processing Pipeline a797ab5b6a058667349ed9bea424ca00 https://www.encodeproject.org/files/ENCFF864TFH/@@download/ENCFF864TFH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF863SSI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF864TFH 206014 ENCODE Processing Pipeline 2df4d093e1098a36598fcb76b23f13cf https://www.encodeproject.org/files/ENCFF863SSI/@@download/ENCFF863SSI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF736XQD bed narrowPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF971KJA 3928333 ENCODE Processing Pipeline d6ac3bc8e0be5ffbff266f42f4b65168 https://www.encodeproject.org/files/ENCFF736XQD/@@download/ENCFF736XQD.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF237JOK bed narrowPeak peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF707RRY, ENCFF971KJA 4925732 ENCODE Processing Pipeline 1a78d22d95caa903506d9a554383fda7 https://www.encodeproject.org/files/ENCFF237JOK/@@download/ENCFF237JOK.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF813HTT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF233IWJ 174015 ENCODE Processing Pipeline a7611427f90e5efe754e7a2599267ec5 https://www.encodeproject.org/files/ENCFF813HTT/@@download/ENCFF813HTT.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample severe bottlenecking ENCFF095DPD fastq reads ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 1 50 single-ended 1174770776 Richard Myers, HAIB b86ff114ffba2af94130fed4be2001b2 SRA:SRR5338831 https://www.encodeproject.org/files/ENCFF095DPD/@@download/ENCFF095DPD.fastq.gz HiSeq 2000 /files/ENCFF913JVQ/ released antibody characterized with exemption, low read depth ENCFF087LWV fastq reads ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 1 50 single-ended 1389436775 Richard Myers, HAIB 5e77e780e28000cab748682eb0e91ac7 SRA:SRR5338832 https://www.encodeproject.org/files/ENCFF087LWV/@@download/ENCFF087LWV.fastq.gz HiSeq 2000 /files/ENCFF993VKM/ released antibody characterized with exemption, low read depth ENCFF301SVO bam unfiltered alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 50 ENCFF095DPD, ENCFF807MUK 1274064679 ENCODE Processing Pipeline cffd6322eb1e1ecb2a2983c2548910c1 https://www.encodeproject.org/files/ENCFF301SVO/@@download/ENCFF301SVO.bam hg19 released antibody characterized with exemption, low read depth ENCFF552FVW bam unfiltered alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 50 ENCFF087LWV, ENCFF807MUK 1566184110 ENCODE Processing Pipeline 7decc94c712689a5ec8c7d9327deedbb https://www.encodeproject.org/files/ENCFF552FVW/@@download/ENCFF552FVW.bam hg19 released antibody characterized with exemption, low read depth ENCFF989NDR bam unfiltered alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 50 ENCFF095DPD, ENCFF643CGH 1278346389 ENCODE Processing Pipeline 9040035b91ace8aced628f2d0aba644d https://www.encodeproject.org/files/ENCFF989NDR/@@download/ENCFF989NDR.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF320BMV bam unfiltered alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 50 ENCFF087LWV, ENCFF643CGH 1572724611 ENCODE Processing Pipeline 3b4f1c0c19bc2dcd1c22bd0855b6d925 https://www.encodeproject.org/files/ENCFF320BMV/@@download/ENCFF320BMV.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF875XTU bam alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 50 ENCFF095DPD, ENCFF807MUK 944850440 ENCODE Processing Pipeline 63cf815bf509ea91b361efb619ca8d07 https://www.encodeproject.org/files/ENCFF875XTU/@@download/ENCFF875XTU.bam hg19 released antibody characterized with exemption, low read depth ENCFF584YAE bam alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 50 ENCFF087LWV, ENCFF807MUK 1198640942 ENCODE Processing Pipeline 6fb515641c762da6db4a4031f8135307 https://www.encodeproject.org/files/ENCFF584YAE/@@download/ENCFF584YAE.bam hg19 released antibody characterized with exemption, low read depth ENCFF056XVW bam alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 50 ENCFF095DPD, ENCFF643CGH 944413952 ENCODE Processing Pipeline e8e474b3e5144239c8a2669d2b083269 https://www.encodeproject.org/files/ENCFF056XVW/@@download/ENCFF056XVW.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF540SXT bam alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 50 ENCFF087LWV, ENCFF643CGH 1198353720 ENCODE Processing Pipeline aa3a1b13fc69355779aaf4d83bc1d5f6 https://www.encodeproject.org/files/ENCFF540SXT/@@download/ENCFF540SXT.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF678YIU bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO 922455886 ENCODE Processing Pipeline 9e3284a35783023d66947ab42568c801 https://www.encodeproject.org/files/ENCFF678YIU/@@download/ENCFF678YIU.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF324TWT bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 941162646 ENCODE Processing Pipeline 4da43bf408382c8d6b9e7a7da3cb3f6c https://www.encodeproject.org/files/ENCFF324TWT/@@download/ENCFF324TWT.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF526TGH bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 1083035089 ENCODE Processing Pipeline 365316e0c56fb9f2019a091041d6b4cf https://www.encodeproject.org/files/ENCFF526TGH/@@download/ENCFF526TGH.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF523UOR bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO 669548724 ENCODE Processing Pipeline 4e041c0473cd5a577fcdf092f685d341 https://www.encodeproject.org/files/ENCFF523UOR/@@download/ENCFF523UOR.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF385HPQ bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 816696554 ENCODE Processing Pipeline 649a57edc78040c1baf8c1caeb83f811 https://www.encodeproject.org/files/ENCFF385HPQ/@@download/ENCFF385HPQ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF766RAU bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 1115202243 ENCODE Processing Pipeline d4a0a10d497b4275c7b9728b8e1242fc https://www.encodeproject.org/files/ENCFF766RAU/@@download/ENCFF766RAU.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF290BUP bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO 5862231 ENCODE Processing Pipeline a1851aec8d208649a3b9f1729ac5be39 https://www.encodeproject.org/files/ENCFF290BUP/@@download/ENCFF290BUP.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF359CNE bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 6153223 ENCODE Processing Pipeline d64d8d256acff1ce3d67ffd20f4997e8 https://www.encodeproject.org/files/ENCFF359CNE/@@download/ENCFF359CNE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF491MFV bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF359CNE 13434710 ENCODE Processing Pipeline d49ec20a498bd12e6bb43eeb033168e6 https://www.encodeproject.org/files/ENCFF491MFV/@@download/ENCFF491MFV.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF057EGU bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 6545134 ENCODE Processing Pipeline 13d8b796d014fd1a1aafa5b03e5c2569 https://www.encodeproject.org/files/ENCFF057EGU/@@download/ENCFF057EGU.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF066WUL bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF290BUP 13360617 ENCODE Processing Pipeline 072b1575e54c5e30ab4887702d239121 https://www.encodeproject.org/files/ENCFF066WUL/@@download/ENCFF066WUL.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF616NNR bigBed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF389KBV 184985 ENCODE Processing Pipeline 352d83f9de8d0d563e90b05c9b7eafed https://www.encodeproject.org/files/ENCFF616NNR/@@download/ENCFF616NNR.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF158AZQ bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF057EGU 13278708 ENCODE Processing Pipeline da08f638085b4a4a42039de3a0b6031e https://www.encodeproject.org/files/ENCFF158AZQ/@@download/ENCFF158AZQ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF389KBV bed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF057EGU, ENCFF290BUP, ENCFF359CNE, ENCFF419RSJ 61908 ENCODE Processing Pipeline 6053ff17ee44221ef85259f47a011a74 https://www.encodeproject.org/files/ENCFF389KBV/@@download/ENCFF389KBV.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF532HCE bed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF057EGU, ENCFF290BUP, ENCFF359CNE, ENCFF419RSJ 65861 ENCODE Processing Pipeline 024805d8bbc803eb8d4a9e158fa30823 https://www.encodeproject.org/files/ENCFF532HCE/@@download/ENCFF532HCE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF669AVV bigBed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF532HCE 190856 ENCODE Processing Pipeline de882740250df3432f7df96c78875501 https://www.encodeproject.org/files/ENCFF669AVV/@@download/ENCFF669AVV.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF445UPX bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ 818083728 ENCODE Processing Pipeline 853a12834971be03d4e1be8968dc9e3e https://www.encodeproject.org/files/ENCFF445UPX/@@download/ENCFF445UPX.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF875YIA bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ 965880962 ENCODE Processing Pipeline 985e2b8f618ee6ca4f4d4ba1fead752e https://www.encodeproject.org/files/ENCFF875YIA/@@download/ENCFF875YIA.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF278NVP bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ, ENCFF875XTU 1206251560 ENCODE Processing Pipeline e95e3ab96070ce10421e30d4ed7b5ed8 https://www.encodeproject.org/files/ENCFF278NVP/@@download/ENCFF278NVP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF187GTP bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ, ENCFF875XTU 1113200102 ENCODE Processing Pipeline 4a5f154e7ba674d952b17d67fd5758ae https://www.encodeproject.org/files/ENCFF187GTP/@@download/ENCFF187GTP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF774DGH bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF444TNY, ENCFF847YDJ, ENCFF875XTU 5923453 ENCODE Processing Pipeline 1c68465e3c10cf7ca801edb567c6a1c8 https://www.encodeproject.org/files/ENCFF774DGH/@@download/ENCFF774DGH.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF659XXQ bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF433RNR 13413949 ENCODE Processing Pipeline 85e6d67edcc72fc98ffd641e0795d193 https://www.encodeproject.org/files/ENCFF659XXQ/@@download/ENCFF659XXQ.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF433RNR bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ 6188871 ENCODE Processing Pipeline 4f349162fa27939dac8a7fc617b685f9 https://www.encodeproject.org/files/ENCFF433RNR/@@download/ENCFF433RNR.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF671XXI bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ, ENCFF875XTU 6588901 ENCODE Processing Pipeline 0b32b352d9146441b84ad9468d59806b https://www.encodeproject.org/files/ENCFF671XXI/@@download/ENCFF671XXI.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF633OQQ bed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF433RNR, ENCFF671XXI, ENCFF774DGH 60284 ENCODE Processing Pipeline 04088c209c696a78154ec3e0025ffc50 https://www.encodeproject.org/files/ENCFF633OQQ/@@download/ENCFF633OQQ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF862ZWG bigBed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF633OQQ 180625 ENCODE Processing Pipeline 9e883d2550b9596219c8eed4129d278a https://www.encodeproject.org/files/ENCFF862ZWG/@@download/ENCFF862ZWG.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF786WZD bed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF433RNR, ENCFF671XXI, ENCFF774DGH 64933 ENCODE Processing Pipeline 35a9ccfb765df1b979ffba0e21e27919 https://www.encodeproject.org/files/ENCFF786WZD/@@download/ENCFF786WZD.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF721WXC bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF774DGH 13340249 ENCODE Processing Pipeline 484b17aae25a943f56c3014296892366 https://www.encodeproject.org/files/ENCFF721WXC/@@download/ENCFF721WXC.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF591JAC bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF671XXI 13250668 ENCODE Processing Pipeline 901c5e47522d4b08b508b9572bf194f7 https://www.encodeproject.org/files/ENCFF591JAC/@@download/ENCFF591JAC.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF247KGV bigBed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF786WZD 188381 ENCODE Processing Pipeline c29196eb8f01fb0844c69bb876531356 https://www.encodeproject.org/files/ENCFF247KGV/@@download/ENCFF247KGV.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF779XEB fastq reads ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF277TIE 3219891071 Richard Myers, HAIB 589fa875bef84b456b737e7e353ed51b SRA:SRR6213912 https://www.encodeproject.org/files/ENCFF779XEB/@@download/ENCFF779XEB.fastq.gz HiSeq 2000 /files/ENCFF794FIO/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF277TIE fastq reads ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF779XEB 3312711266 Richard Myers, HAIB fc7f74282f6900f97abb229870ef7f6d SRA:SRR6213912 https://www.encodeproject.org/files/ENCFF277TIE/@@download/ENCFF277TIE.fastq.gz HiSeq 2000 /files/ENCFF667MAD/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF537ZJG bam unfiltered alignments ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF277TIE, ENCFF779XEB, ENCFF807MUK 7767563150 ENCODE Processing Pipeline 91333bdfc03be48cc412e88ced21583b https://www.encodeproject.org/files/ENCFF537ZJG/@@download/ENCFF537ZJG.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF696DSP bam alignments ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF277TIE, ENCFF779XEB, ENCFF807MUK 4525330779 ENCODE Processing Pipeline 6c344d73797aadb0e46af657f9ac118c https://www.encodeproject.org/files/ENCFF696DSP/@@download/ENCFF696DSP.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF244WFQ bam unfiltered alignments ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF277TIE, ENCFF643CGH, ENCFF779XEB 7819757883 ENCODE Processing Pipeline 40941a0dd4917f3e7d0ee0a1d6f18f41 https://www.encodeproject.org/files/ENCFF244WFQ/@@download/ENCFF244WFQ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF924UDG bam alignments ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF277TIE, ENCFF643CGH, ENCFF779XEB 4526897341 ENCODE Processing Pipeline ac1ab3f19e6503897d27409acec92c37 https://www.encodeproject.org/files/ENCFF924UDG/@@download/ENCFF924UDG.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF780TNS bigBed narrowPeak peaks ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF271TFD 11673942 ENCODE Processing Pipeline 36e415c76d62f272a942b1b9ef5b214f https://www.encodeproject.org/files/ENCFF780TNS/@@download/ENCFF780TNS.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF319XHW bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF992XPI 128074 ENCODE Processing Pipeline 64fed34745df05ca0aeb95b2b3113e9b https://www.encodeproject.org/files/ENCFF319XHW/@@download/ENCFF319XHW.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF130YDU bigWig signal p-value ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF924UDG 1016814456 ENCODE Processing Pipeline bd74010562e12584706e3ded7fb213a5 https://www.encodeproject.org/files/ENCFF130YDU/@@download/ENCFF130YDU.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF755ELJ bigWig fold change over control ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF924UDG 1279998556 ENCODE Processing Pipeline 7f5587595d527c8dd97a2a44b760e813 https://www.encodeproject.org/files/ENCFF755ELJ/@@download/ENCFF755ELJ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF271TFD bed narrowPeak peaks ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF924UDG 5315333 ENCODE Processing Pipeline 7b47703570eb3795ad800288b9bf492b https://www.encodeproject.org/files/ENCFF271TFD/@@download/ENCFF271TFD.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF992XPI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF271TFD, ENCFF419RSJ 43368 ENCODE Processing Pipeline e1390cb9537e5878956d5490a84826f9 https://www.encodeproject.org/files/ENCFF992XPI/@@download/ENCFF992XPI.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF159CDC bigWig signal p-value ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF696DSP 1014980891 ENCODE Processing Pipeline 5bea84acb97a9c25c784bc8e0f0ed727 https://www.encodeproject.org/files/ENCFF159CDC/@@download/ENCFF159CDC.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF854RKR bed narrowPeak peaks ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF696DSP 5254882 ENCODE Processing Pipeline f2a2ee8ab8cd634f5a8da5952b6944e3 https://www.encodeproject.org/files/ENCFF854RKR/@@download/ENCFF854RKR.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF150ABP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF854RKR 44597 ENCODE Processing Pipeline 82ec00c9b00f4be641952440a96add9b https://www.encodeproject.org/files/ENCFF150ABP/@@download/ENCFF150ABP.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF040LCW bigWig fold change over control ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF696DSP 1263769097 ENCODE Processing Pipeline 3056f277f3eab15bc9c773e83ffb2dfa https://www.encodeproject.org/files/ENCFF040LCW/@@download/ENCFF040LCW.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF489YYS bigBed narrowPeak peaks ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF854RKR 11654341 ENCODE Processing Pipeline 42d15970799650a01a922e5331fb476e https://www.encodeproject.org/files/ENCFF489YYS/@@download/ENCFF489YYS.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF081DVZ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR906OMM ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF150ABP 134637 ENCODE Processing Pipeline ed0f924d1ab6a8af7203115de5d22d0c https://www.encodeproject.org/files/ENCFF081DVZ/@@download/ENCFF081DVZ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF581WJA fastq reads ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF016QKU 1973361753 Richard Myers, HAIB 84a732f39946b72b2f7ffc5a9eaf3511 SRA:SRR6214207 https://www.encodeproject.org/files/ENCFF581WJA/@@download/ENCFF581WJA.fastq.gz HiSeq 2000 /files/ENCFF092KOU/ released antibody characterized with exemption ENCFF016QKU fastq reads ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF581WJA 2023838562 Richard Myers, HAIB 36a7356f678930319e13cf9bc67badaa SRA:SRR6214207 https://www.encodeproject.org/files/ENCFF016QKU/@@download/ENCFF016QKU.fastq.gz HiSeq 2000 /files/ENCFF553BIW/ released antibody characterized with exemption ENCFF238MXX bam unfiltered alignments ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF016QKU, ENCFF581WJA, ENCFF643CGH 4860957473 ENCODE Processing Pipeline 036963841c2e40d0f93628dc88b9da09 https://www.encodeproject.org/files/ENCFF238MXX/@@download/ENCFF238MXX.bam GRCh38 released antibody characterized with exemption ENCFF582TXQ bam unfiltered alignments ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF016QKU, ENCFF581WJA, ENCFF807MUK 4841412306 ENCODE Processing Pipeline 0c391974a9002a733a5c8b4664a47db2 https://www.encodeproject.org/files/ENCFF582TXQ/@@download/ENCFF582TXQ.bam hg19 released antibody characterized with exemption ENCFF223YMP bam alignments ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF016QKU, ENCFF581WJA, ENCFF643CGH 3662371255 ENCODE Processing Pipeline 37cab36a82bf96d39226b8405f7d412c https://www.encodeproject.org/files/ENCFF223YMP/@@download/ENCFF223YMP.bam GRCh38 released antibody characterized with exemption ENCFF534JTX bam alignments ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF016QKU, ENCFF581WJA, ENCFF807MUK 3658735673 ENCODE Processing Pipeline 65f40988757c82c4416f6d148e4453a9 https://www.encodeproject.org/files/ENCFF534JTX/@@download/ENCFF534JTX.bam hg19 released antibody characterized with exemption ENCFF825IFJ bigWig signal p-value ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF223YMP 1296661095 ENCODE Processing Pipeline e0c9203095b110c8f7e6d578e09b32a4 https://www.encodeproject.org/files/ENCFF825IFJ/@@download/ENCFF825IFJ.bigWig GRCh38 released antibody characterized with exemption ENCFF366KBC bigWig fold change over control ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF223YMP 1248820989 ENCODE Processing Pipeline 72fe469abf282fac06233a6cbcaeb3f4 https://www.encodeproject.org/files/ENCFF366KBC/@@download/ENCFF366KBC.bigWig GRCh38 released antibody characterized with exemption ENCFF580NSJ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF296GAR, ENCFF419RSJ 27249 ENCODE Processing Pipeline 570e615629d98fe49614fa01f6e79b4b https://www.encodeproject.org/files/ENCFF580NSJ/@@download/ENCFF580NSJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF621JVM bigBed narrowPeak peaks ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF296GAR 12068365 ENCODE Processing Pipeline 8f32bd9d039edf55b9baf32645d09825 https://www.encodeproject.org/files/ENCFF621JVM/@@download/ENCFF621JVM.bigBed GRCh38 released antibody characterized with exemption ENCFF899PRI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF580NSJ 109107 ENCODE Processing Pipeline 28d70c098c7bbe1f8e77d8a098047576 https://www.encodeproject.org/files/ENCFF899PRI/@@download/ENCFF899PRI.bigBed GRCh38 released antibody characterized with exemption ENCFF296GAR bed narrowPeak peaks ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF223YMP 5366617 ENCODE Processing Pipeline 8de03070daf145cc75a75572085c58cc https://www.encodeproject.org/files/ENCFF296GAR/@@download/ENCFF296GAR.bed.gz GRCh38 released antibody characterized with exemption ENCFF563SXN bigWig signal p-value ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF534JTX 1227267130 ENCODE Processing Pipeline 319590c201ef43db3fcbc0947180ee91 https://www.encodeproject.org/files/ENCFF563SXN/@@download/ENCFF563SXN.bigWig hg19 released antibody characterized with exemption ENCFF280ASJ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF830XLX 107197 ENCODE Processing Pipeline 06a6b09ac4d00ab2ae937d58fd526377 https://www.encodeproject.org/files/ENCFF280ASJ/@@download/ENCFF280ASJ.bigBed hg19 released antibody characterized with exemption ENCFF477EJA bed narrowPeak peaks ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF534JTX 5364675 ENCODE Processing Pipeline 160bcee42e6ba15647b39857e8fdb60c https://www.encodeproject.org/files/ENCFF477EJA/@@download/ENCFF477EJA.bed.gz hg19 released antibody characterized with exemption ENCFF519TQG bigWig fold change over control ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF534JTX 1246279987 ENCODE Processing Pipeline db208250ca88e9b470033b9337ec05f5 https://www.encodeproject.org/files/ENCFF519TQG/@@download/ENCFF519TQG.bigWig hg19 released antibody characterized with exemption ENCFF830XLX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF477EJA 27034 ENCODE Processing Pipeline c14d8cbdff517f26478f529b3a4b2607 https://www.encodeproject.org/files/ENCFF830XLX/@@download/ENCFF830XLX.bed.gz hg19 released antibody characterized with exemption ENCFF542XWB bigBed narrowPeak peaks ENCSR761RDB ChIP-seq UBERON:0001157 transverse colon tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF477EJA 12047616 ENCODE Processing Pipeline 1834857eb6ba60d3e7b9d30eeffbbabc https://www.encodeproject.org/files/ENCFF542XWB/@@download/ENCFF542XWB.bigBed hg19 released antibody characterized with exemption ENCFF882UZC fastq reads ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF706YJI 2577932887 Richard Myers, HAIB 9ff2e9cac8850ae91e213d54f32d6b13 SRA:SRR6214321 https://www.encodeproject.org/files/ENCFF882UZC/@@download/ENCFF882UZC.fastq.gz HiSeq 2000 /files/ENCFF916VDS/ released antibody characterized with exemption ENCFF706YJI fastq reads ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF882UZC 2617011229 Richard Myers, HAIB 3d74da06a74f2b7b7b3a572e5deeb0be SRA:SRR6214321 https://www.encodeproject.org/files/ENCFF706YJI/@@download/ENCFF706YJI.fastq.gz HiSeq 2000 /files/ENCFF567TLA/ released antibody characterized with exemption ENCFF937OAI bam alignments ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF706YJI, ENCFF807MUK, ENCFF882UZC 4544269958 ENCODE Processing Pipeline 9197ada87ed44b6c10786a5381a380b9 https://www.encodeproject.org/files/ENCFF937OAI/@@download/ENCFF937OAI.bam hg19 released antibody characterized with exemption ENCFF304CZU bam unfiltered alignments ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF706YJI, ENCFF807MUK, ENCFF882UZC 6197127297 ENCODE Processing Pipeline f20197acde2d2dfe63842e1dacc98b24 https://www.encodeproject.org/files/ENCFF304CZU/@@download/ENCFF304CZU.bam hg19 released antibody characterized with exemption ENCFF924ETU bam unfiltered alignments ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF706YJI, ENCFF882UZC 6225435256 ENCODE Processing Pipeline 188e5cfec61f97e33dee411dccfcc7ab https://www.encodeproject.org/files/ENCFF924ETU/@@download/ENCFF924ETU.bam GRCh38 released antibody characterized with exemption ENCFF481BPS bam alignments ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF706YJI, ENCFF882UZC 4550227563 ENCODE Processing Pipeline 5680b25e095202b5695d1e400c84e598 https://www.encodeproject.org/files/ENCFF481BPS/@@download/ENCFF481BPS.bam GRCh38 released antibody characterized with exemption ENCFF090XFA bigWig signal p-value ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF481BPS 1502975133 ENCODE Processing Pipeline 9abb075bcb5413615ee431d17a845ba8 https://www.encodeproject.org/files/ENCFF090XFA/@@download/ENCFF090XFA.bigWig GRCh38 released antibody characterized with exemption ENCFF105NEW bigWig fold change over control ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF481BPS 1606501438 ENCODE Processing Pipeline 3cf4075fc23f6b4d4e0c23b66bd04f08 https://www.encodeproject.org/files/ENCFF105NEW/@@download/ENCFF105NEW.bigWig GRCh38 released antibody characterized with exemption ENCFF046YQM bed narrowPeak peaks ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF481BPS 5636638 ENCODE Processing Pipeline 5299f5f37fcac148b8615e6b2900c67c https://www.encodeproject.org/files/ENCFF046YQM/@@download/ENCFF046YQM.bed.gz GRCh38 released antibody characterized with exemption ENCFF077SCE bigBed narrowPeak peaks ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF046YQM 11865909 ENCODE Processing Pipeline 403a8f0acde04961cb81933692b288da https://www.encodeproject.org/files/ENCFF077SCE/@@download/ENCFF077SCE.bigBed GRCh38 released antibody characterized with exemption ENCFF104UOC bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF046YQM, ENCFF419RSJ 280 ENCODE Processing Pipeline 93e32e54a18b98753753cb57eef48d76 https://www.encodeproject.org/files/ENCFF104UOC/@@download/ENCFF104UOC.bed.gz GRCh38 released antibody characterized with exemption ENCFF380FPX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF104UOC 14786 ENCODE Processing Pipeline 4a85367dfa15385a2a3b6ba804d18745 https://www.encodeproject.org/files/ENCFF380FPX/@@download/ENCFF380FPX.bigBed GRCh38 released antibody characterized with exemption ENCFF355ZJR bigWig signal p-value ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF937OAI 1266753172 ENCODE Processing Pipeline f127cf1692e3b9e83af536b7c48e6b2d https://www.encodeproject.org/files/ENCFF355ZJR/@@download/ENCFF355ZJR.bigWig hg19 released antibody characterized with exemption ENCFF200DLH bigWig fold change over control ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF937OAI 1574810913 ENCODE Processing Pipeline 32a61616dba6dc11d73808a394da35ba https://www.encodeproject.org/files/ENCFF200DLH/@@download/ENCFF200DLH.bigWig hg19 released antibody characterized with exemption ENCFF269GVM bigBed narrowPeak peaks ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF905MOZ 11842230 ENCODE Processing Pipeline 3a27de5c1276cd904833a5e2d6adda84 https://www.encodeproject.org/files/ENCFF269GVM/@@download/ENCFF269GVM.bigBed hg19 released antibody characterized with exemption ENCFF963PEH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF905MOZ 276 ENCODE Processing Pipeline 99b33f18100e21999d32630ebb9bab1f https://www.encodeproject.org/files/ENCFF963PEH/@@download/ENCFF963PEH.bed.gz hg19 released antibody characterized with exemption ENCFF546NVQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF963PEH 14644 ENCODE Processing Pipeline 7e80246a48d2aab8a79cf80262c78d5c https://www.encodeproject.org/files/ENCFF546NVQ/@@download/ENCFF546NVQ.bigBed hg19 released antibody characterized with exemption ENCFF905MOZ bed narrowPeak peaks ENCSR773QRB ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF937OAI 5633472 ENCODE Processing Pipeline 8edfc1301ca2e4594dc31ab7c8cebcdb https://www.encodeproject.org/files/ENCFF905MOZ/@@download/ENCFF905MOZ.bed.gz hg19 released antibody characterized with exemption ENCFF017GOO fastq reads ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 1 50 single-ended 1880863895 Richard Myers, HAIB 937973a2478ecf704f736a58a46e2929 SRA:SRR5339415 https://www.encodeproject.org/files/ENCFF017GOO/@@download/ENCFF017GOO.fastq.gz HiSeq 2000 /files/ENCFF654JMO/ released mixed read lengths, antibody characterized with exemption, low read depth ENCFF705KCW fastq reads ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 1 76 single-ended 1412913944 Richard Myers, HAIB bb5d14e7f7bc902fa63da732e80ef357 SRA:SRR5339416 https://www.encodeproject.org/files/ENCFF705KCW/@@download/ENCFF705KCW.fastq.gz HiSeq 2000 /files/ENCFF074CLV/ released inconsistent control read length, mixed read lengths, antibody characterized with exemption, low read depth ENCFF717YXY bam unfiltered alignments ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 50 ENCFF643CGH, ENCFF705KCW 1222574092 ENCODE Processing Pipeline 105163b047cecec44a890c600a6f2bbb https://www.encodeproject.org/files/ENCFF717YXY/@@download/ENCFF717YXY.bam GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF878VSW bam unfiltered alignments ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 50 ENCFF705KCW, ENCFF807MUK 1217261647 ENCODE Processing Pipeline be199a5256a69d5b2e805054998fa70b https://www.encodeproject.org/files/ENCFF878VSW/@@download/ENCFF878VSW.bam hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF788STB bam unfiltered alignments ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 50 ENCFF017GOO, ENCFF643CGH 2039800411 ENCODE Processing Pipeline f9c1b075b13b69f9debf7afbb4adf1f4 https://www.encodeproject.org/files/ENCFF788STB/@@download/ENCFF788STB.bam GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF916PKM bam unfiltered alignments ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 50 ENCFF017GOO, ENCFF807MUK 2033567894 ENCODE Processing Pipeline 97e9f824b0715396e9796941b7ec4142 https://www.encodeproject.org/files/ENCFF916PKM/@@download/ENCFF916PKM.bam hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF361SFX bam alignments ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 50 ENCFF643CGH, ENCFF705KCW 920599975 ENCODE Processing Pipeline 4fb5b999b14415dbbe5865694340a901 https://www.encodeproject.org/files/ENCFF361SFX/@@download/ENCFF361SFX.bam GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF064YNC bam alignments ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 50 ENCFF705KCW, ENCFF807MUK 920439513 ENCODE Processing Pipeline d34f4563c4aa50fe62e9d74b6007de98 https://www.encodeproject.org/files/ENCFF064YNC/@@download/ENCFF064YNC.bam hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF932FED bam alignments ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 50 ENCFF017GOO, ENCFF643CGH 1494543350 ENCODE Processing Pipeline 908e915397dfd70c8d68e45e30a8ae7c https://www.encodeproject.org/files/ENCFF932FED/@@download/ENCFF932FED.bam GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF844NZR bam alignments ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 50 ENCFF017GOO, ENCFF807MUK 1494514489 ENCODE Processing Pipeline 99c74a92287095321046325f94b10b3e https://www.encodeproject.org/files/ENCFF844NZR/@@download/ENCFF844NZR.bam hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF308SQN bigWig fold change over control ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 ENCFF064YNC, ENCFF449ZKA 515122469 ENCODE Processing Pipeline aa8bc986cc2a4ad61d99b09a7804d7e1 https://www.encodeproject.org/files/ENCFF308SQN/@@download/ENCFF308SQN.bigWig hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF139EUG bigWig signal p-value ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF064YNC, ENCFF449ZKA, ENCFF844NZR, ENCFF929OSU 1120652957 ENCODE Processing Pipeline 274fcd7712c4c382f5970c780020f42c https://www.encodeproject.org/files/ENCFF139EUG/@@download/ENCFF139EUG.bigWig hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF014CZH bigWig fold change over control ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 ENCFF844NZR, ENCFF929OSU 525925565 ENCODE Processing Pipeline e8011a1372f271b75cc4759e42f2a2cf https://www.encodeproject.org/files/ENCFF014CZH/@@download/ENCFF014CZH.bigWig hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF334WHT bigWig signal p-value ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 ENCFF844NZR, ENCFF929OSU 643883354 ENCODE Processing Pipeline 76013a9a96db8653dae59a0103cbcb31 https://www.encodeproject.org/files/ENCFF334WHT/@@download/ENCFF334WHT.bigWig hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF268IZJ bigWig signal p-value ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 ENCFF064YNC, ENCFF449ZKA 661864892 ENCODE Processing Pipeline f9c675c8272625c1d46b34e954b7941f https://www.encodeproject.org/files/ENCFF268IZJ/@@download/ENCFF268IZJ.bigWig hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF629JUA bed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 ENCFF064YNC, ENCFF449ZKA 5765663 ENCODE Processing Pipeline 9915636e438fd998572c529133ee8315 https://www.encodeproject.org/files/ENCFF629JUA/@@download/ENCFF629JUA.bed.gz hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF017AFI bigBed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 ENCFF629JUA 13385252 ENCODE Processing Pipeline c8a8d665f01bad0523c8d86b0821364b https://www.encodeproject.org/files/ENCFF017AFI/@@download/ENCFF017AFI.bigBed hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF575WAU bed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF064YNC, ENCFF449ZKA, ENCFF844NZR, ENCFF929OSU 6860197 ENCODE Processing Pipeline 5e7552b1f0b4005ef912400f6131c491 https://www.encodeproject.org/files/ENCFF575WAU/@@download/ENCFF575WAU.bed.gz hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF438HPL bed narrowPeak conservative idr thresholded peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF001TDO, ENCFF136ODS, ENCFF575WAU, ENCFF629JUA 135865 ENCODE Processing Pipeline 7ad3cc0966bcb0f767b70dc03b6182f2 https://www.encodeproject.org/files/ENCFF438HPL/@@download/ENCFF438HPL.bed.gz hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF494NAX bigWig fold change over control ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF064YNC, ENCFF449ZKA, ENCFF844NZR, ENCFF929OSU 1182364900 ENCODE Processing Pipeline 8adc58b758bff901f77b7511343f23b2 https://www.encodeproject.org/files/ENCFF494NAX/@@download/ENCFF494NAX.bigWig hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF503LYA bigBed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 ENCFF136ODS 13285893 ENCODE Processing Pipeline 0ab57b932185523bfb90fcb0f0ed2753 https://www.encodeproject.org/files/ENCFF503LYA/@@download/ENCFF503LYA.bigBed hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF136ODS bed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 ENCFF844NZR, ENCFF929OSU 5964046 ENCODE Processing Pipeline be3f58a9c5d39356def9ef240208e6e5 https://www.encodeproject.org/files/ENCFF136ODS/@@download/ENCFF136ODS.bed.gz hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF547GWA bigBed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF575WAU 13390029 ENCODE Processing Pipeline e4fcc549c459ff143d1fe76328e5382b https://www.encodeproject.org/files/ENCFF547GWA/@@download/ENCFF547GWA.bigBed hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF806MVB bigBed narrowPeak conservative idr thresholded peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF438HPL 286481 ENCODE Processing Pipeline 602982d0b21c6a5cdd2ae830e85d5f0d https://www.encodeproject.org/files/ENCFF806MVB/@@download/ENCFF806MVB.bigBed hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF177FZU bed narrowPeak optimal idr thresholded peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF001TDO, ENCFF136ODS, ENCFF575WAU, ENCFF629JUA 201045 ENCODE Processing Pipeline f15f87c10854c7ddee174962575bc02e https://www.encodeproject.org/files/ENCFF177FZU/@@download/ENCFF177FZU.bed.gz hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF434RYB bigBed narrowPeak optimal idr thresholded peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF177FZU 453394 ENCODE Processing Pipeline 2401878d6121007f244545509add6ead https://www.encodeproject.org/files/ENCFF434RYB/@@download/ENCFF434RYB.bigBed hg19 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF577IKJ bigWig signal p-value ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 ENCFF506QEL, ENCFF932FED 609131345 ENCODE Processing Pipeline ae11f6b47d068caf171fe3a394ffe202 https://www.encodeproject.org/files/ENCFF577IKJ/@@download/ENCFF577IKJ.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF344JTR bigWig signal p-value ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 ENCFF361SFX, ENCFF749JIA 621798237 ENCODE Processing Pipeline 545bb92fdbf1ab97eeeee516328bf45e https://www.encodeproject.org/files/ENCFF344JTR/@@download/ENCFF344JTR.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF559PQD bigWig signal p-value ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF361SFX, ENCFF506QEL, ENCFF749JIA, ENCFF932FED 1003094890 ENCODE Processing Pipeline b5239038df14cbee4fb4a83ecdc011a2 https://www.encodeproject.org/files/ENCFF559PQD/@@download/ENCFF559PQD.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF970THO bigWig fold change over control ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 ENCFF506QEL, ENCFF932FED 542781500 ENCODE Processing Pipeline 1e4d2aed2db54e895f5f871293e37497 https://www.encodeproject.org/files/ENCFF970THO/@@download/ENCFF970THO.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF499NGO bigWig fold change over control ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 ENCFF361SFX, ENCFF749JIA 508284437 ENCODE Processing Pipeline 549492ad421b4fd3e37deb67388511af https://www.encodeproject.org/files/ENCFF499NGO/@@download/ENCFF499NGO.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF981ISA bed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 ENCFF506QEL, ENCFF932FED 5829680 ENCODE Processing Pipeline 3c32c96b5959c3b0d1f7f13255580ba6 https://www.encodeproject.org/files/ENCFF981ISA/@@download/ENCFF981ISA.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF693WQA bigWig fold change over control ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF361SFX, ENCFF506QEL, ENCFF749JIA, ENCFF932FED 1167616209 ENCODE Processing Pipeline 6b4b15efda30fce88b7598aa018cc738 https://www.encodeproject.org/files/ENCFF693WQA/@@download/ENCFF693WQA.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF466XFJ bigBed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 ENCFF528FFE 11177297 ENCODE Processing Pipeline f7a17ee4acf5ce729c313d7787509e96 https://www.encodeproject.org/files/ENCFF466XFJ/@@download/ENCFF466XFJ.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF530OOZ bigBed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1 ENCFF981ISA 13291368 ENCODE Processing Pipeline 52f9b553df63f800fa15601b814a7341 https://www.encodeproject.org/files/ENCFF530OOZ/@@download/ENCFF530OOZ.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF059HCN bed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF361SFX, ENCFF506QEL, ENCFF749JIA, ENCFF932FED 6748326 ENCODE Processing Pipeline e14fa671126c6fe3bb0bb4e8600b9ee4 https://www.encodeproject.org/files/ENCFF059HCN/@@download/ENCFF059HCN.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF528FFE bed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 2 ENCFF361SFX, ENCFF749JIA 5502252 ENCODE Processing Pipeline 66a758dc22c375a710fa58a37df2b8b2 https://www.encodeproject.org/files/ENCFF528FFE/@@download/ENCFF528FFE.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF490ZAJ bed narrowPeak conservative idr thresholded peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF059HCN, ENCFF419RSJ, ENCFF528FFE, ENCFF981ISA 136440 ENCODE Processing Pipeline 723352af6ab28372a36037072a4e08d2 https://www.encodeproject.org/files/ENCFF490ZAJ/@@download/ENCFF490ZAJ.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF655WEI bigBed narrowPeak peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF059HCN 13390504 ENCODE Processing Pipeline 6d9914e14b68af415ac3a52dc1a3437f https://www.encodeproject.org/files/ENCFF655WEI/@@download/ENCFF655WEI.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF415SHK bigBed narrowPeak conservative idr thresholded peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF490ZAJ 286688 ENCODE Processing Pipeline 682d8e7e743ce8a11e6e506daa9a28ae https://www.encodeproject.org/files/ENCFF415SHK/@@download/ENCFF415SHK.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF769SEZ bed narrowPeak optimal idr thresholded peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF059HCN, ENCFF419RSJ, ENCFF528FFE, ENCFF981ISA 197486 ENCODE Processing Pipeline 76af9fc9f3e2f05be2ccaa5723105d87 https://www.encodeproject.org/files/ENCFF769SEZ/@@download/ENCFF769SEZ.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF504NTG bigBed narrowPeak optimal idr thresholded peaks ENCSR848YWD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-09-23 ENCODE 1, 2 ENCFF769SEZ 448907 ENCODE Processing Pipeline 76116ee9389233a1b6520458fdae7c77 https://www.encodeproject.org/files/ENCFF504NTG/@@download/ENCFF504NTG.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption, low read depth ENCFF000QRX bam alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QSN 2622676472 Richard Myers, HAIB 68215d88e5ed777894bd35553aa07211 https://www.encodeproject.org/files/ENCFF000QRX/@@download/ENCFF000QRX.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QRY bigBed broadPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UNZ 192696 Richard Myers, HAIB a9ccd751d7d17203ef8b0713d5beeae3 https://www.encodeproject.org/files/ENCFF000QRY/@@download/ENCFF000QRY.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QRZ bigBed broadPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UOA 169577 Richard Myers, HAIB 693904dc1579647202bb2eac126c85fc https://www.encodeproject.org/files/ENCFF000QRZ/@@download/ENCFF000QRZ.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QSA bam alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QST 3656176357 Richard Myers, HAIB a15bbe64be21ac3119045d88f4b60977 https://www.encodeproject.org/files/ENCFF000QSA/@@download/ENCFF000QSA.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QSC bigWig raw signal ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 27749854 Richard Myers, HAIB df03044c55563a98208d53643dbb0062 https://www.encodeproject.org/files/ENCFF000QSC/@@download/ENCFF000QSC.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QSD bigWig raw signal ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 49220673 Richard Myers, HAIB 1f405f8232d7ece44a1be4d5e6127303 https://www.encodeproject.org/files/ENCFF000QSD/@@download/ENCFF000QSD.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QSN fastq reads ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 2188855964 Richard Myers, HAIB 0ff5357985e99b5b1afbc97a3e0d042a https://www.encodeproject.org/files/ENCFF000QSN/@@download/ENCFF000QSN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QTJ/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QST fastq reads ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 3028677639 Richard Myers, HAIB 7768e584369c3af5067028de469b91ea https://www.encodeproject.org/files/ENCFF000QST/@@download/ENCFF000QST.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QTU/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001UNZ bed broadPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 93389 Richard Myers, HAIB 4ff52946149be339f56c5e6b09e52bf1 https://www.encodeproject.org/files/ENCFF001UNZ/@@download/ENCFF001UNZ.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001UOA bed broadPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 80582 Richard Myers, HAIB c8e43843b5a8fa173e6d615997c2503d https://www.encodeproject.org/files/ENCFF001UOA/@@download/ENCFF001UOA.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF002CNA bed narrowPeak optimal idr thresholded peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 138538 ENCODE Consortium Analysis Working Group 9f4fb7fe59cb2f7d0c36b24f5131465d https://www.encodeproject.org/files/ENCFF002CNA/@@download/ENCFF002CNA.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF855OGQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE ENCFF002CNA 438380 ENCODE Consortium 7edc3e773426ca2d23a424a06017502a https://www.encodeproject.org/files/ENCFF855OGQ/@@download/ENCFF855OGQ.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF527HDY bam unfiltered alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QSN, ENCFF643CGH 2393791006 ENCODE Processing Pipeline fa4acc46d2bc14df8d4f5fe147847caa https://www.encodeproject.org/files/ENCFF527HDY/@@download/ENCFF527HDY.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF337NPB bam alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QSN, ENCFF643CGH 549580794 ENCODE Processing Pipeline 3f030c8670f5e6f49196949f51f5bc40 https://www.encodeproject.org/files/ENCFF337NPB/@@download/ENCFF337NPB.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF573FJR bam unfiltered alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QST, ENCFF643CGH 3259584701 ENCODE Processing Pipeline 35e3f64ade0f5ca8382b5055237a858f https://www.encodeproject.org/files/ENCFF573FJR/@@download/ENCFF573FJR.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF460RPS bam alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QST, ENCFF643CGH 450263088 ENCODE Processing Pipeline 00bef0e08b9b9ec1d17298e869d27afe https://www.encodeproject.org/files/ENCFF460RPS/@@download/ENCFF460RPS.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF711CQV bam unfiltered alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QSN, ENCFF807MUK 2391199601 ENCODE Processing Pipeline 49fc636078e7c385794c7a0c9556e684 https://www.encodeproject.org/files/ENCFF711CQV/@@download/ENCFF711CQV.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF990BKO bam alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QSN, ENCFF807MUK 549712358 ENCODE Processing Pipeline ccd7d5bc68eeaa6460b4598d26a4d642 https://www.encodeproject.org/files/ENCFF990BKO/@@download/ENCFF990BKO.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF846HBE bam unfiltered alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QST, ENCFF807MUK 3254016449 ENCODE Processing Pipeline 9850eb477ce2165cd36fe925ac2322eb https://www.encodeproject.org/files/ENCFF846HBE/@@download/ENCFF846HBE.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF555PAB bam alignments ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QST, ENCFF807MUK 450400543 ENCODE Processing Pipeline dae1ba5ad022d7c68e38c261cdf55fe0 https://www.encodeproject.org/files/ENCFF555PAB/@@download/ENCFF555PAB.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF643ZZM bigWig signal p-value ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF270FBL, ENCFF337NPB, ENCFF349WAO 350578314 ENCODE Processing Pipeline 070c20f577ac1bb54b0646fc27e83db6 https://www.encodeproject.org/files/ENCFF643ZZM/@@download/ENCFF643ZZM.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF604XHI bigWig signal p-value ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF270FBL, ENCFF349WAO, ENCFF460RPS 375967379 ENCODE Processing Pipeline 71692262881ecf2e0de4f22f3b8078df https://www.encodeproject.org/files/ENCFF604XHI/@@download/ENCFF604XHI.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF013WWD bigWig fold change over control ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF270FBL, ENCFF337NPB, ENCFF349WAO 211903970 ENCODE Processing Pipeline 6082a1dc82752b3f2e025771d342af82 https://www.encodeproject.org/files/ENCFF013WWD/@@download/ENCFF013WWD.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF165DFT bigWig signal p-value ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF270FBL, ENCFF337NPB, ENCFF349WAO, ENCFF460RPS 452178117 ENCODE Processing Pipeline 123e3d69901d4a0019b47b93b5be527f https://www.encodeproject.org/files/ENCFF165DFT/@@download/ENCFF165DFT.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF844PFK bigWig fold change over control ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF270FBL, ENCFF349WAO, ENCFF460RPS 175160269 ENCODE Processing Pipeline c70383166cca84a21b944fbf67f7a60c https://www.encodeproject.org/files/ENCFF844PFK/@@download/ENCFF844PFK.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF464BAU bigWig fold change over control ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF270FBL, ENCFF337NPB, ENCFF349WAO, ENCFF460RPS 351490041 ENCODE Processing Pipeline 3b38346e4a453696208168b7b132266d https://www.encodeproject.org/files/ENCFF464BAU/@@download/ENCFF464BAU.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF520YQP bed narrowPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF270FBL, ENCFF337NPB, ENCFF349WAO 5088510 ENCODE Processing Pipeline d113da9e487a24eef649f5320f94f768 https://www.encodeproject.org/files/ENCFF520YQP/@@download/ENCFF520YQP.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF115FDN bed narrowPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF270FBL, ENCFF349WAO, ENCFF460RPS 3662046 ENCODE Processing Pipeline dcb6532a0b96acd3111b990d4c04ae01 https://www.encodeproject.org/files/ENCFF115FDN/@@download/ENCFF115FDN.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF391ZZY bigBed narrowPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF520YQP 10524116 ENCODE Processing Pipeline 5185216537fe46102b7c70c6b7cfe85b https://www.encodeproject.org/files/ENCFF391ZZY/@@download/ENCFF391ZZY.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF680ZVD bed narrowPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF270FBL, ENCFF337NPB, ENCFF349WAO, ENCFF460RPS 5578818 ENCODE Processing Pipeline e27a1ff7e54cbe66193191cb01ff4105 https://www.encodeproject.org/files/ENCFF680ZVD/@@download/ENCFF680ZVD.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF897NMG bigBed narrowPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF680ZVD 12988287 ENCODE Processing Pipeline 658c8c9b66de17f550642416dd1f7982 https://www.encodeproject.org/files/ENCFF897NMG/@@download/ENCFF897NMG.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF994KMK bigBed narrowPeak peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF115FDN 8680335 ENCODE Processing Pipeline 910722890476d6fac7aa3a8a8b06f2d7 https://www.encodeproject.org/files/ENCFF994KMK/@@download/ENCFF994KMK.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF388BTU bed narrowPeak conservative idr thresholded peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF115FDN, ENCFF419RSJ, ENCFF520YQP, ENCFF680ZVD 103335 ENCODE Processing Pipeline fae78a8b5da94027d1668aaebb721d4c https://www.encodeproject.org/files/ENCFF388BTU/@@download/ENCFF388BTU.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF206PHL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF388BTU 222099 ENCODE Processing Pipeline fffdca6d1ddb93a3ac455d0edcd170cd https://www.encodeproject.org/files/ENCFF206PHL/@@download/ENCFF206PHL.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF934XSC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF713ZPE 258037 ENCODE Processing Pipeline 20c084809efcc97553bcd061f9080743 https://www.encodeproject.org/files/ENCFF934XSC/@@download/ENCFF934XSC.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF713ZPE bed narrowPeak optimal idr thresholded peaks ENCSR000BJO ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF115FDN, ENCFF419RSJ, ENCFF520YQP, ENCFF680ZVD 129989 ENCODE Processing Pipeline 90cfb51c074d73fa3f6470e6ddde6ba3 https://www.encodeproject.org/files/ENCFF713ZPE/@@download/ENCFF713ZPE.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000OIV bam alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OJH 1162511816 Richard Myers, HAIB e6512ad6a0f0aa9d2f9419b8ece63e1c https://www.encodeproject.org/files/ENCFF000OIV/@@download/ENCFF000OIV.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OIX bigBed broadPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAA 598489 Richard Myers, HAIB 93c5837b9782effe555824ebe7172bfa https://www.encodeproject.org/files/ENCFF000OIX/@@download/ENCFF000OIX.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OIY bigBed broadPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAB 413797 Richard Myers, HAIB d77ccb60458df6dff215185329eb3bfd https://www.encodeproject.org/files/ENCFF000OIY/@@download/ENCFF000OIY.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OJA bigWig raw signal ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 1 116050641 Richard Myers, HAIB a0b2c59167f0c9bf5b567a0dc0ea5e6f https://www.encodeproject.org/files/ENCFF000OJA/@@download/ENCFF000OJA.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000OJB bigWig raw signal ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 1 17436472 Richard Myers, HAIB 57e3b2c323b0413827b4a87ac9830a75 https://www.encodeproject.org/files/ENCFF000OJB/@@download/ENCFF000OJB.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000OJC bam alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OJO 3691243295 Richard Myers, HAIB 9c875e14d2ccf1a36be9bd167c404d93 https://www.encodeproject.org/files/ENCFF000OJC/@@download/ENCFF000OJC.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OJH fastq reads ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 766980057 Richard Myers, HAIB 17385180bf0e63bd7d45396433fad783 https://www.encodeproject.org/files/ENCFF000OJH/@@download/ENCFF000OJH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OJO fastq reads ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 3269188538 Richard Myers, HAIB e92cf3b437b9be52180561419de78e08 https://www.encodeproject.org/files/ENCFF000OJO/@@download/ENCFF000OJO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UAA bed broadPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 1 376570 Richard Myers, HAIB 3288a0773d2b19c68cf4722b6ce5385f https://www.encodeproject.org/files/ENCFF001UAA/@@download/ENCFF001UAA.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UAB bed broadPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 1 226023 Richard Myers, HAIB 142c64f9af1d253aaaa9cdcfa277222a https://www.encodeproject.org/files/ENCFF001UAB/@@download/ENCFF001UAB.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CII bed narrowPeak optimal idr thresholded peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 294121 ENCODE Consortium Analysis Working Group c7733269eacdd09fffc31f76aa356fdb https://www.encodeproject.org/files/ENCFF002CII/@@download/ENCFF002CII.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF538PLP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE ENCFF002CII 646541 ENCODE Consortium b323fe93e324446d139a91427a5b594d https://www.encodeproject.org/files/ENCFF538PLP/@@download/ENCFF538PLP.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF809CJJ bam alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OJH, ENCFF643CGH 630868193 ENCODE Processing Pipeline 2643f3f2b03b991bb1185d629afafa2a https://www.encodeproject.org/files/ENCFF809CJJ/@@download/ENCFF809CJJ.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF637LDY bam unfiltered alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OJH, ENCFF643CGH 1004076794 ENCODE Processing Pipeline f22aa4e7bc98137e12fa4684808fa2de https://www.encodeproject.org/files/ENCFF637LDY/@@download/ENCFF637LDY.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF074EVM bam unfiltered alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OJO, ENCFF643CGH 3514859670 ENCODE Processing Pipeline 98d6ab5b8bc1f4da136471545ceeb093 https://www.encodeproject.org/files/ENCFF074EVM/@@download/ENCFF074EVM.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF843RIG bam alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OJO, ENCFF643CGH 1592670350 ENCODE Processing Pipeline 2f449e819f0b8b3846c61f12e64fb2aa https://www.encodeproject.org/files/ENCFF843RIG/@@download/ENCFF843RIG.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF500RDM bam unfiltered alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OJH, ENCFF807MUK 1001495120 ENCODE Processing Pipeline 3849d83dd24fa9b24461f83632ef09bb https://www.encodeproject.org/files/ENCFF500RDM/@@download/ENCFF500RDM.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF145BKE bam alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OJH, ENCFF807MUK 626519123 ENCODE Processing Pipeline ff819259551815e4b6ad50bc988c87fd https://www.encodeproject.org/files/ENCFF145BKE/@@download/ENCFF145BKE.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF733ZQG bam alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OJO, ENCFF807MUK 1584089321 ENCODE Processing Pipeline 2760655d872c93c044b5bb4211028435 https://www.encodeproject.org/files/ENCFF733ZQG/@@download/ENCFF733ZQG.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF942IIR bam unfiltered alignments ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OJO, ENCFF807MUK 3533174042 ENCODE Processing Pipeline 2d1939a648397e894fc61d9ff810e07e https://www.encodeproject.org/files/ENCFF942IIR/@@download/ENCFF942IIR.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF195KPO bigWig signal p-value ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF843RIG, ENCFF857FLV 350131374 ENCODE Processing Pipeline cc2be8fa6b37e6fd9a554dbc6d22ab17 https://www.encodeproject.org/files/ENCFF195KPO/@@download/ENCFF195KPO.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF676DFP bigWig signal p-value ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF809CJJ, ENCFF857FLV 321506569 ENCODE Processing Pipeline eec6290ae13ae1cdee0e66671093a50a https://www.encodeproject.org/files/ENCFF676DFP/@@download/ENCFF676DFP.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF899BYT bigWig signal p-value ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF809CJJ, ENCFF843RIG, ENCFF857FLV 332873636 ENCODE Processing Pipeline cd5186306a7abb787b45ad4d1fad35aa https://www.encodeproject.org/files/ENCFF899BYT/@@download/ENCFF899BYT.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF066PJA bigWig fold change over control ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF843RIG, ENCFF857FLV 499075758 ENCODE Processing Pipeline 6a0e02eeb8a04a6b5e294ef71d0d6b75 https://www.encodeproject.org/files/ENCFF066PJA/@@download/ENCFF066PJA.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF568TYM bigWig fold change over control ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF809CJJ, ENCFF857FLV 257780409 ENCODE Processing Pipeline 3e01d96967d9397674ad5a77821919cd https://www.encodeproject.org/files/ENCFF568TYM/@@download/ENCFF568TYM.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF601RJF bigWig fold change over control ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF809CJJ, ENCFF843RIG, ENCFF857FLV 652803956 ENCODE Processing Pipeline 7bcfc0b53b4a63e9c1fcb74d1acd11fc https://www.encodeproject.org/files/ENCFF601RJF/@@download/ENCFF601RJF.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF804BGX bed narrowPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF843RIG, ENCFF857FLV 5643976 ENCODE Processing Pipeline e595d0b59171e89cf8c987c0fe37e390 https://www.encodeproject.org/files/ENCFF804BGX/@@download/ENCFF804BGX.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF826QFX bigBed narrowPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF801RGY 13204531 ENCODE Processing Pipeline 21c1f6bd5b99bb5d3545b57848504a06 https://www.encodeproject.org/files/ENCFF826QFX/@@download/ENCFF826QFX.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF314KSF bigBed narrowPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF804BGX 13147443 ENCODE Processing Pipeline faa03ec621aad7abe4c1d1f41eed4eca https://www.encodeproject.org/files/ENCFF314KSF/@@download/ENCFF314KSF.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF301EQW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF680HDE 565483 ENCODE Processing Pipeline 0c0e816f5fa4eb715c112ba0d4d08328 https://www.encodeproject.org/files/ENCFF301EQW/@@download/ENCFF301EQW.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF219ENU bed narrowPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF809CJJ, ENCFF857FLV 4861597 ENCODE Processing Pipeline e35868d5f7755a2391fcbfb7ff9491e2 https://www.encodeproject.org/files/ENCFF219ENU/@@download/ENCFF219ENU.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF818TTG bigBed narrowPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF219ENU 10627219 ENCODE Processing Pipeline ae82918af77008fb5b5360064af380e3 https://www.encodeproject.org/files/ENCFF818TTG/@@download/ENCFF818TTG.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF680HDE bed narrowPeak conservative idr thresholded peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF219ENU, ENCFF419RSJ, ENCFF801RGY, ENCFF804BGX 316070 ENCODE Processing Pipeline 0616129f94e3a3da5b57f23e8b71f83b https://www.encodeproject.org/files/ENCFF680HDE/@@download/ENCFF680HDE.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF801RGY bed narrowPeak peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF809CJJ, ENCFF843RIG, ENCFF857FLV 6251324 ENCODE Processing Pipeline bc188e46eb615a8d41cf00246ea24227 https://www.encodeproject.org/files/ENCFF801RGY/@@download/ENCFF801RGY.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF004QBE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF113EFE 768258 ENCODE Processing Pipeline d26b6e820c67c862bff82bee3c69a905 https://www.encodeproject.org/files/ENCFF004QBE/@@download/ENCFF004QBE.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF113EFE bed narrowPeak optimal idr thresholded peaks ENCSR000BII ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POU2F2-human ENCAB000AKC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF219ENU, ENCFF419RSJ, ENCFF801RGY, ENCFF804BGX 367215 ENCODE Processing Pipeline 6f08178e74ae00cdf916f3a453cfde93 https://www.encodeproject.org/files/ENCFF113EFE/@@download/ENCFF113EFE.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000ODU bam alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OEH 731656869 Richard Myers, HAIB c8e9cde1ad0176fc164385ad1f189a6e https://www.encodeproject.org/files/ENCFF000ODU/@@download/ENCFF000ODU.bam hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000ODW bam alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OEJ 590891250 Richard Myers, HAIB ef0fe52eaccad234403083918b1e970b https://www.encodeproject.org/files/ENCFF000ODW/@@download/ENCFF000ODW.bam hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000ODX bigBed broadPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TYT 203320 Richard Myers, HAIB 2fb9fc9ed05d85b84ce59e8bd0bf6649 https://www.encodeproject.org/files/ENCFF000ODX/@@download/ENCFF000ODX.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000ODY bigBed broadPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TYV 76081 Richard Myers, HAIB 8681f74ddea11145b668ac7a954d489d https://www.encodeproject.org/files/ENCFF000ODY/@@download/ENCFF000ODY.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OEA bigWig raw signal ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 27590744 Richard Myers, HAIB fb63b110521d63bfd5d23ca17b70d741 https://www.encodeproject.org/files/ENCFF000OEA/@@download/ENCFF000OEA.bigWig hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OEC bigWig raw signal ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 18467995 Richard Myers, HAIB a506c6e6c85db69119b0cf24ecd2ab15 https://www.encodeproject.org/files/ENCFF000OEC/@@download/ENCFF000OEC.bigWig hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OEH fastq reads ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1038753064 Richard Myers, HAIB a7d93cad13a08af91bc808ef76d06aed https://www.encodeproject.org/files/ENCFF000OEH/@@download/ENCFF000OEH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OEJ fastq reads ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 900997112 Richard Myers, HAIB f89d01328c034ae94344b564df407a91 https://www.encodeproject.org/files/ENCFF000OEJ/@@download/ENCFF000OEJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001TYT bed broadPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 83093 Richard Myers, HAIB 312b4cb00e08360a9fb4a8e4474e216e https://www.encodeproject.org/files/ENCFF001TYT/@@download/ENCFF001TYT.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001TYV bed broadPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 18042 Richard Myers, HAIB ad01485e217f09133561735c2aee4cc9 https://www.encodeproject.org/files/ENCFF001TYV/@@download/ENCFF001TYV.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF002CHT bed narrowPeak optimal idr thresholded peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 33163 ENCODE Consortium Analysis Working Group 1fcda1bc2495dce47bb851030913fa90 https://www.encodeproject.org/files/ENCFF002CHT/@@download/ENCFF002CHT.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF213FVH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE ENCFF002CHT 101374 ENCODE Consortium 1b1e634afa2111c79c48303237f90a8b https://www.encodeproject.org/files/ENCFF213FVH/@@download/ENCFF213FVH.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF125QGK bam unfiltered alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OEH, ENCFF643CGH 1190051350 ENCODE Processing Pipeline fc6cb7cc9c23ce718333c17119d16500 https://www.encodeproject.org/files/ENCFF125QGK/@@download/ENCFF125QGK.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF924KUA bam alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OEJ, ENCFF643CGH 312666675 ENCODE Processing Pipeline becee3cd8be1c51e6cddb6b4ff03b0f3 https://www.encodeproject.org/files/ENCFF924KUA/@@download/ENCFF924KUA.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF292CKM bam unfiltered alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OEJ, ENCFF643CGH 1050720661 ENCODE Processing Pipeline e041817f4b62892a7be4015dab85ea27 https://www.encodeproject.org/files/ENCFF292CKM/@@download/ENCFF292CKM.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF713PKK bam alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OEH, ENCFF643CGH 293552376 ENCODE Processing Pipeline 816e373f120f913efa545f9fc345e6c1 https://www.encodeproject.org/files/ENCFF713PKK/@@download/ENCFF713PKK.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF336YAA bam unfiltered alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OEH, ENCFF807MUK 1188110824 ENCODE Processing Pipeline ff290c872a6786fd64cea99983c7245b https://www.encodeproject.org/files/ENCFF336YAA/@@download/ENCFF336YAA.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF532MNB bam unfiltered alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OEJ, ENCFF807MUK 1049410986 ENCODE Processing Pipeline b993e51b9bf2ce85ffae395baf830a01 https://www.encodeproject.org/files/ENCFF532MNB/@@download/ENCFF532MNB.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF401FGJ bam alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OEH, ENCFF807MUK 289075969 ENCODE Processing Pipeline 02004b0f9bffa2df63ba58d145018e79 https://www.encodeproject.org/files/ENCFF401FGJ/@@download/ENCFF401FGJ.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF488TFQ bam alignments ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OEJ, ENCFF807MUK 308022329 ENCODE Processing Pipeline 4259f9c32e7932259982651675d80c06 https://www.encodeproject.org/files/ENCFF488TFQ/@@download/ENCFF488TFQ.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF453VRD bigWig signal p-value ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF924KUA 383115919 ENCODE Processing Pipeline aa6945c6310dcd7be0848cebd55e1a9c https://www.encodeproject.org/files/ENCFF453VRD/@@download/ENCFF453VRD.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF637JVP bigWig signal p-value ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF713PKK 382375516 ENCODE Processing Pipeline 9537e693d999e82fa47485933e7a87a8 https://www.encodeproject.org/files/ENCFF637JVP/@@download/ENCFF637JVP.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF856MZL bigWig signal p-value ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF713PKK, ENCFF924KUA 699866703 ENCODE Processing Pipeline 2a880180aaaccb03ac890aabdd6c83c7 https://www.encodeproject.org/files/ENCFF856MZL/@@download/ENCFF856MZL.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF560LZO bigWig fold change over control ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF713PKK 169438222 ENCODE Processing Pipeline d8bbaec105f77463a8154f67089dcb34 https://www.encodeproject.org/files/ENCFF560LZO/@@download/ENCFF560LZO.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF337ECP bigWig fold change over control ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF924KUA 180214423 ENCODE Processing Pipeline 8b5ffff7e965acadd78e099fb38c6994 https://www.encodeproject.org/files/ENCFF337ECP/@@download/ENCFF337ECP.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF837EBB bed narrowPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF713PKK 3557393 ENCODE Processing Pipeline 8984c72f1a10bc30be40b5830308c6e2 https://www.encodeproject.org/files/ENCFF837EBB/@@download/ENCFF837EBB.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF090IZQ bed narrowPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF924KUA 3463610 ENCODE Processing Pipeline 602a31e3a8a636578c49071c3ac81d9c https://www.encodeproject.org/files/ENCFF090IZQ/@@download/ENCFF090IZQ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF974EMV bigBed narrowPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF837EBB 7570734 ENCODE Processing Pipeline 38ef46bfcc435313fb2079a66afd3678 https://www.encodeproject.org/files/ENCFF974EMV/@@download/ENCFF974EMV.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF951RXW bigWig fold change over control ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF713PKK, ENCFF924KUA 433991399 ENCODE Processing Pipeline da5e95a00581576bf3f7e5b3121ebb4b https://www.encodeproject.org/files/ENCFF951RXW/@@download/ENCFF951RXW.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF604SNB bigBed narrowPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF090IZQ 7545040 ENCODE Processing Pipeline d68f40ffb02584ca0860335e2fd9f59a https://www.encodeproject.org/files/ENCFF604SNB/@@download/ENCFF604SNB.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF727CUX bed narrowPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF713PKK, ENCFF924KUA 4209212 ENCODE Processing Pipeline b290cfa31327f0070399db84c0d37770 https://www.encodeproject.org/files/ENCFF727CUX/@@download/ENCFF727CUX.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF051NHQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF928YOZ 87728 ENCODE Processing Pipeline 0ee5cf546e322916edea4684fc8c6437 https://www.encodeproject.org/files/ENCFF051NHQ/@@download/ENCFF051NHQ.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF782XCD bigBed narrowPeak peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF727CUX 10746620 ENCODE Processing Pipeline b13d43118479e08cd74095a2e634c976 https://www.encodeproject.org/files/ENCFF782XCD/@@download/ENCFF782XCD.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF928YOZ bed narrowPeak conservative idr thresholded peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF090IZQ, ENCFF419RSJ, ENCFF727CUX, ENCFF837EBB 25073 ENCODE Processing Pipeline 0c76d111b374f18a9349a1cbbd913dc6 https://www.encodeproject.org/files/ENCFF928YOZ/@@download/ENCFF928YOZ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF044RBH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF313BDA 101193 ENCODE Processing Pipeline eee7685e2b5ec2123c12f188653eb671 https://www.encodeproject.org/files/ENCFF044RBH/@@download/ENCFF044RBH.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF313BDA bed narrowPeak optimal idr thresholded peaks ENCSR000BJD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF090IZQ, ENCFF419RSJ, ENCFF727CUX, ENCFF837EBB 35116 ENCODE Processing Pipeline c3c963eb7159c35c5a9b3c3acd963fec https://www.encodeproject.org/files/ENCFF313BDA/@@download/ENCFF313BDA.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QCD bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QCR 1348401713 Richard Myers, HAIB 274e8e201f61826fd4f23be489d6334e https://www.encodeproject.org/files/ENCFF000QCD/@@download/ENCFF000QCD.bam hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QCE bigBed broadPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UKL 690036 Richard Myers, HAIB af2ee5eabf43b702b76d2d2fb4fbf244 https://www.encodeproject.org/files/ENCFF000QCE/@@download/ENCFF000QCE.bigBed hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QCF bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QCS 1987058617 Richard Myers, HAIB c028dab7ff95002af578ea525722b9a7 https://www.encodeproject.org/files/ENCFF000QCF/@@download/ENCFF000QCF.bam hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QCG bigBed broadPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UKM 742185 Richard Myers, HAIB 64332318bbc1a77d39aea3c1733ca177 https://www.encodeproject.org/files/ENCFF000QCG/@@download/ENCFF000QCG.bigBed hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QCJ bigWig raw signal ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 1 41141940 Richard Myers, HAIB 49246d880203d36d460629d23066edd3 https://www.encodeproject.org/files/ENCFF000QCJ/@@download/ENCFF000QCJ.bigWig hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000QCK bigWig raw signal ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 1 29971547 Richard Myers, HAIB 71e6e8cfcd19007d5c21552fade5c38f https://www.encodeproject.org/files/ENCFF000QCK/@@download/ENCFF000QCK.bigWig hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000QCR fastq reads ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1330005388 Richard Myers, HAIB 446b1dd05987f96061b3a7c14d1717da https://www.encodeproject.org/files/ENCFF000QCR/@@download/ENCFF000QCR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QCS fastq reads ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1902729259 Richard Myers, HAIB d557658c1a157b2a3abb6b37c1aa88a5 https://www.encodeproject.org/files/ENCFF000QCS/@@download/ENCFF000QCS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UKL bed broadPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 1 434822 Richard Myers, HAIB 5f288bddd95d7f6f8b9e48f34e8674ed https://www.encodeproject.org/files/ENCFF001UKL/@@download/ENCFF001UKL.bed.gz hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UKM bed broadPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 1 402146 Richard Myers, HAIB dacd21c37aced1dfec94f5b508976f22 https://www.encodeproject.org/files/ENCFF001UKM/@@download/ENCFF001UKM.bed.gz hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CME bed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 342030 ENCODE Consortium Analysis Working Group 30d95e9beac104673ddddd030762942b https://www.encodeproject.org/files/ENCFF002CME/@@download/ENCFF002CME.bed.gz hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF707HNG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE ENCFF002CME 748081 ENCODE Consortium 486c6eddcb74e691f7ffcdf6d96d5b1f https://www.encodeproject.org/files/ENCFF707HNG/@@download/ENCFF707HNG.bigBed hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF546YUW bam unfiltered alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QCR, ENCFF643CGH 1440147058 ENCODE Processing Pipeline 1f264bf4ecf8d10fa2cefc87fe1ae891 https://www.encodeproject.org/files/ENCFF546YUW/@@download/ENCFF546YUW.bam GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF568RDF bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QCR, ENCFF643CGH 737582256 ENCODE Processing Pipeline 16d0a4562e47ccb6ab824472397850d3 https://www.encodeproject.org/files/ENCFF568RDF/@@download/ENCFF568RDF.bam GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF214TVN bam unfiltered alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QCS, ENCFF643CGH 2128466320 ENCODE Processing Pipeline fabfcfa92132e15829ac0733719a7db0 https://www.encodeproject.org/files/ENCFF214TVN/@@download/ENCFF214TVN.bam GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF665EXC bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QCS, ENCFF643CGH 1344635885 ENCODE Processing Pipeline 350873e0388962d6d58faf38176b66ae https://www.encodeproject.org/files/ENCFF665EXC/@@download/ENCFF665EXC.bam GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF705VZW bam unfiltered alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QCR, ENCFF807MUK 1438324609 ENCODE Processing Pipeline 58ae754d97d849b13055b965f11260cf https://www.encodeproject.org/files/ENCFF705VZW/@@download/ENCFF705VZW.bam hg19 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF422ZRF bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QCR, ENCFF807MUK 737872380 ENCODE Processing Pipeline 864f6fa952e84bc89517f6648ea6ab8b https://www.encodeproject.org/files/ENCFF422ZRF/@@download/ENCFF422ZRF.bam hg19 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF911SMC bam unfiltered alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QCS, ENCFF807MUK 2123654715 ENCODE Processing Pipeline 7f70eb81a7433033547ddf08e4f76840 https://www.encodeproject.org/files/ENCFF911SMC/@@download/ENCFF911SMC.bam hg19 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF717CDL bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QCS, ENCFF807MUK 1345242329 ENCODE Processing Pipeline fc223de23bd51ac63b15c759a3046544 https://www.encodeproject.org/files/ENCFF717CDL/@@download/ENCFF717CDL.bam hg19 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF905NVW bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF665EXC, ENCFF836OEO 626693104 ENCODE Processing Pipeline 2b4d5ec6f318a2ee6fced89b9f9e577a https://www.encodeproject.org/files/ENCFF905NVW/@@download/ENCFF905NVW.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF456LKX bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF568RDF, ENCFF836OEO 629918605 ENCODE Processing Pipeline 06700ed1e99d8d754591d10bd332d6d6 https://www.encodeproject.org/files/ENCFF456LKX/@@download/ENCFF456LKX.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF945EWN bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF568RDF, ENCFF665EXC, ENCFF836OEO 851956326 ENCODE Processing Pipeline ddaa84bd771bc56a35d9bb1cb7825dc2 https://www.encodeproject.org/files/ENCFF945EWN/@@download/ENCFF945EWN.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF545LQM bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF665EXC, ENCFF836OEO 661276138 ENCODE Processing Pipeline d73b7dbb3a3dea22e658b6cec2602a42 https://www.encodeproject.org/files/ENCFF545LQM/@@download/ENCFF545LQM.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF720LZR bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF568RDF, ENCFF836OEO 462384121 ENCODE Processing Pipeline 4b88a7e482e144b3e66d2ac9a27e8a72 https://www.encodeproject.org/files/ENCFF720LZR/@@download/ENCFF720LZR.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF600YIF bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF568RDF, ENCFF665EXC, ENCFF836OEO 894815134 ENCODE Processing Pipeline e2bc1b6ec9c17dd0bf9d2120ba4c62b6 https://www.encodeproject.org/files/ENCFF600YIF/@@download/ENCFF600YIF.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF836ATN bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF665EXC, ENCFF836OEO 6196481 ENCODE Processing Pipeline cf5ad2caed13eecb0451f34aa62b80f1 https://www.encodeproject.org/files/ENCFF836ATN/@@download/ENCFF836ATN.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF933HXQ bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF836ATN 13134261 ENCODE Processing Pipeline b2e7e5a199b7bf6e36d2012673a60241 https://www.encodeproject.org/files/ENCFF933HXQ/@@download/ENCFF933HXQ.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF747XLZ bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF568RDF, ENCFF836OEO 6630979 ENCODE Processing Pipeline ee1d7f7b2940d61745d4c49f19426578 https://www.encodeproject.org/files/ENCFF747XLZ/@@download/ENCFF747XLZ.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF796IXS bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF747XLZ 12496775 ENCODE Processing Pipeline 599406d1c0e2983ff77385a7921a2682 https://www.encodeproject.org/files/ENCFF796IXS/@@download/ENCFF796IXS.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF567VBY bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF568RDF, ENCFF665EXC, ENCFF836OEO 6906555 ENCODE Processing Pipeline ce4d8a7d74914fb9f611be77bb32e571 https://www.encodeproject.org/files/ENCFF567VBY/@@download/ENCFF567VBY.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF927ZUH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF056DZM 543972 ENCODE Processing Pipeline 786ec440ec44ab9d6fe46f3488ab9d84 https://www.encodeproject.org/files/ENCFF927ZUH/@@download/ENCFF927ZUH.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF518VFK bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF567VBY 12868576 ENCODE Processing Pipeline a16d2832303095ff5156456b8c90ea14 https://www.encodeproject.org/files/ENCFF518VFK/@@download/ENCFF518VFK.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF056DZM bed narrowPeak conservative idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF567VBY, ENCFF747XLZ, ENCFF836ATN 292624 ENCODE Processing Pipeline a04015dacc8ce1a693d658f9fb715acd https://www.encodeproject.org/files/ENCFF056DZM/@@download/ENCFF056DZM.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF118HUH bed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF567VBY, ENCFF747XLZ, ENCFF836ATN 357044 ENCODE Processing Pipeline 1040399115870575346daaba5c6bc46a https://www.encodeproject.org/files/ENCFF118HUH/@@download/ENCFF118HUH.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF580CVU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF118HUH 782092 ENCODE Processing Pipeline 37f86405796bb3e3d6d25f895a2530b8 https://www.encodeproject.org/files/ENCFF580CVU/@@download/ENCFF580CVU.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF032RPG fastq reads ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF858ZHX 1483262097 Richard Myers, HAIB 65f535238dd69c6e21095e30371b4a0f SRA:SRR6212677 https://www.encodeproject.org/files/ENCFF032RPG/@@download/ENCFF032RPG.fastq.gz HiSeq 2000 /files/ENCFF598GVT/ released antibody characterized with exemption, low read depth ENCFF858ZHX fastq reads ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF032RPG 1612396776 Richard Myers, HAIB e86978f66a44d22bede0b25cc2c9f800 SRA:SRR6212677 https://www.encodeproject.org/files/ENCFF858ZHX/@@download/ENCFF858ZHX.fastq.gz HiSeq 2000 /files/ENCFF549JAY/ released antibody characterized with exemption, low read depth ENCFF798MAY bam unfiltered alignments ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF032RPG, ENCFF807MUK, ENCFF858ZHX 3905958252 ENCODE Processing Pipeline 3b81cd6898c62b39750ba1f29bf799dc https://www.encodeproject.org/files/ENCFF798MAY/@@download/ENCFF798MAY.bam hg19 released antibody characterized with exemption, low read depth ENCFF570ZQD bam alignments ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF032RPG, ENCFF807MUK, ENCFF858ZHX 1652817652 ENCODE Processing Pipeline d344ca8ffd1a94849932288d5e4ce927 https://www.encodeproject.org/files/ENCFF570ZQD/@@download/ENCFF570ZQD.bam hg19 released antibody characterized with exemption, low read depth ENCFF132KSK bam alignments ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF032RPG, ENCFF643CGH, ENCFF858ZHX 1651549827 ENCODE Processing Pipeline 27f4e73a46a13118be5f08794eb12121 https://www.encodeproject.org/files/ENCFF132KSK/@@download/ENCFF132KSK.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF634EAR bam unfiltered alignments ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF032RPG, ENCFF643CGH, ENCFF858ZHX 3930072427 ENCODE Processing Pipeline 1cfc965f9a50ffd85dc771c23d81246d https://www.encodeproject.org/files/ENCFF634EAR/@@download/ENCFF634EAR.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF118EUF bigWig signal p-value ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF132KSK 1050352313 ENCODE Processing Pipeline 70c78efdb56fde2f61fc259d3706bf1d https://www.encodeproject.org/files/ENCFF118EUF/@@download/ENCFF118EUF.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF984WNZ bigWig fold change over control ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF132KSK 777082049 ENCODE Processing Pipeline e5cde36d50bd5c18f92acc4bcf11cd2e https://www.encodeproject.org/files/ENCFF984WNZ/@@download/ENCFF984WNZ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF520ZFS bed narrowPeak peaks ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF132KSK 5068554 ENCODE Processing Pipeline 15b4f44891e7057f04fe8a9e58e737e8 https://www.encodeproject.org/files/ENCFF520ZFS/@@download/ENCFF520ZFS.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF138WFS bigBed narrowPeak peaks ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF520ZFS 11487816 ENCODE Processing Pipeline f99728575ef4d59adc8f647934f4f0d1 https://www.encodeproject.org/files/ENCFF138WFS/@@download/ENCFF138WFS.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF261OWX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF520ZFS 705 ENCODE Processing Pipeline 9f9830e9818a9b7faf761d17deee9bee https://www.encodeproject.org/files/ENCFF261OWX/@@download/ENCFF261OWX.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF521GSS bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF261OWX 42160 ENCODE Processing Pipeline 82e7d4ad56ef53d6cd7952f9b70adb20 https://www.encodeproject.org/files/ENCFF521GSS/@@download/ENCFF521GSS.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF301QGR bigWig signal p-value ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF570ZQD 1229292995 ENCODE Processing Pipeline 12496f4baf05efd4a382a4c96b7f5182 https://www.encodeproject.org/files/ENCFF301QGR/@@download/ENCFF301QGR.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF427FUX bigWig fold change over control ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF570ZQD 773926468 ENCODE Processing Pipeline cad941aad4c98350f022c73b33d8d9d5 https://www.encodeproject.org/files/ENCFF427FUX/@@download/ENCFF427FUX.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF198PGO bigBed narrowPeak peaks ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF023UTX 11469055 ENCODE Processing Pipeline 1357bd6f228f27a2e80867c54c44c8cb https://www.encodeproject.org/files/ENCFF198PGO/@@download/ENCFF198PGO.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF219GKZ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF469TTI 43756 ENCODE Processing Pipeline 8d5a07123d048ced1cb9cc6a63af21b9 https://www.encodeproject.org/files/ENCFF219GKZ/@@download/ENCFF219GKZ.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF469TTI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF023UTX 1196 ENCODE Processing Pipeline 9701e254abddac8b2fee75c5c78334b9 https://www.encodeproject.org/files/ENCFF469TTI/@@download/ENCFF469TTI.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF023UTX bed narrowPeak peaks ENCSR116RGC ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF570ZQD 5068042 ENCODE Processing Pipeline fea0552bff9a87aeebd12782368572a8 https://www.encodeproject.org/files/ENCFF023UTX/@@download/ENCFF023UTX.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF308YUI fastq reads ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF170LID 1462905657 Richard Myers, HAIB 89be5eb6b23aace4c32ac3719b26db8a SRA:SRR6214091 https://www.encodeproject.org/files/ENCFF308YUI/@@download/ENCFF308YUI.fastq.gz HiSeq 2000 /files/ENCFF388FAT/ released control low read depth, antibody characterized with exemption ENCFF170LID fastq reads ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF308YUI 1496622893 Richard Myers, HAIB bb100351198ba6c2d9280057f060c0b8 SRA:SRR6214091 https://www.encodeproject.org/files/ENCFF170LID/@@download/ENCFF170LID.fastq.gz HiSeq 2000 /files/ENCFF413RZV/ released control low read depth, antibody characterized with exemption ENCFF834YTR bam unfiltered alignments ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF170LID, ENCFF308YUI, ENCFF807MUK 3515127870 ENCODE Processing Pipeline dca9e5771c233cabaf8be3e847ef5ada https://www.encodeproject.org/files/ENCFF834YTR/@@download/ENCFF834YTR.bam hg19 released control low read depth, antibody characterized with exemption ENCFF254YDK bam unfiltered alignments ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF170LID, ENCFF308YUI, ENCFF643CGH 3529607717 ENCODE Processing Pipeline 9c0e56b08040ff3c3204e363e4b92ff7 https://www.encodeproject.org/files/ENCFF254YDK/@@download/ENCFF254YDK.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF931BEZ bam alignments ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF170LID, ENCFF308YUI, ENCFF807MUK 2653921102 ENCODE Processing Pipeline 86723a89f6676501d59b9b3d15bf9a14 https://www.encodeproject.org/files/ENCFF931BEZ/@@download/ENCFF931BEZ.bam hg19 released control low read depth, antibody characterized with exemption ENCFF397ADX bam alignments ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF170LID, ENCFF308YUI, ENCFF643CGH 2656614389 ENCODE Processing Pipeline 54932ff7d2bac92ba862c1267e3b0fc3 https://www.encodeproject.org/files/ENCFF397ADX/@@download/ENCFF397ADX.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF195CQW bigWig fold change over control ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF397ADX 767696351 ENCODE Processing Pipeline 47ffbcf4fb682037ce68b85eb762f900 https://www.encodeproject.org/files/ENCFF195CQW/@@download/ENCFF195CQW.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF712NUK bigWig signal p-value ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF397ADX 670729502 ENCODE Processing Pipeline 3d23c79ad1957e66a16259812cddfbf4 https://www.encodeproject.org/files/ENCFF712NUK/@@download/ENCFF712NUK.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF237IGL bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF567XKZ 475026 ENCODE Processing Pipeline 4a8c35ccdcbc364abebc2217cb7e487b https://www.encodeproject.org/files/ENCFF237IGL/@@download/ENCFF237IGL.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF567XKZ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF759YZA 246157 ENCODE Processing Pipeline 754dcba2bcc08cc56f60734517f6dffc https://www.encodeproject.org/files/ENCFF567XKZ/@@download/ENCFF567XKZ.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF759YZA bed narrowPeak peaks ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF397ADX 4919080 ENCODE Processing Pipeline cb2a5307cb1c4225ee8ddb3ec36599d5 https://www.encodeproject.org/files/ENCFF759YZA/@@download/ENCFF759YZA.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF781UJR bigBed narrowPeak peaks ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF759YZA 11448712 ENCODE Processing Pipeline 27d75d8e378e2c2f6425b41c95d76541 https://www.encodeproject.org/files/ENCFF781UJR/@@download/ENCFF781UJR.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF265HOC bigWig signal p-value ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF931BEZ 672657268 ENCODE Processing Pipeline d704ab609b2bb82de0a53856fb28869b https://www.encodeproject.org/files/ENCFF265HOC/@@download/ENCFF265HOC.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF299TSQ bigWig fold change over control ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF931BEZ 777473797 ENCODE Processing Pipeline 2c4a23986ceb87489c41f67ace327aa3 https://www.encodeproject.org/files/ENCFF299TSQ/@@download/ENCFF299TSQ.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF433YXI bed narrowPeak peaks ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF931BEZ 4906299 ENCODE Processing Pipeline 9e824e15037fe6a72787c8d1c8408624 https://www.encodeproject.org/files/ENCFF433YXI/@@download/ENCFF433YXI.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF423CKN bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF433YXI 240442 ENCODE Processing Pipeline 9a2dfb532592956632fea3ac536f0b5b https://www.encodeproject.org/files/ENCFF423CKN/@@download/ENCFF423CKN.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF846OMB bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF423CKN 465831 ENCODE Processing Pipeline 5337d9f3d2938805b60cdab23d982b57 https://www.encodeproject.org/files/ENCFF846OMB/@@download/ENCFF846OMB.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF352JTN bigBed narrowPeak peaks ENCSR828PZH ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF433YXI 11421886 ENCODE Processing Pipeline 84c1cb62da9a51a66fa9992afdd1e457 https://www.encodeproject.org/files/ENCFF352JTN/@@download/ENCFF352JTN.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF000PUG bam alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000PUS 1228709893 Richard Myers, HAIB f8463c39ec480fb7c7cc9497449048a0 https://www.encodeproject.org/files/ENCFF000PUG/@@download/ENCFF000PUG.bam hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PUH bam alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000PUT 1045269630 Richard Myers, HAIB 6b39ec08a1194ffac2990b677155bf87 https://www.encodeproject.org/files/ENCFF000PUH/@@download/ENCFF000PUH.bam hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PUK bigBed broadPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UIQ 1405424 Richard Myers, HAIB 8c0056d957f5b2e5dd0a693ab217555b https://www.encodeproject.org/files/ENCFF000PUK/@@download/ENCFF000PUK.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PUL bigBed broadPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UIR 661955 Richard Myers, HAIB d711170990b4844eb483658eb5adad4c https://www.encodeproject.org/files/ENCFF000PUL/@@download/ENCFF000PUL.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PUM bigWig raw signal ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 1 136681250 Richard Myers, HAIB f95f6a3b18e54c1703a222a62f607ea8 https://www.encodeproject.org/files/ENCFF000PUM/@@download/ENCFF000PUM.bigWig hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PUN bigWig raw signal ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 1 121450927 Richard Myers, HAIB 65092efd54acf1e3efb4e057666c0137 https://www.encodeproject.org/files/ENCFF000PUN/@@download/ENCFF000PUN.bigWig hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PUS fastq reads ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1338797999 Richard Myers, HAIB b05d0a450f25b8d09ad612f03d1fd199 https://www.encodeproject.org/files/ENCFF000PUS/@@download/ENCFF000PUS.fastq.gz HiSeq 2000 /files/ENCFF000PVC/ released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PUT fastq reads ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1067328378 Richard Myers, HAIB 5093634d79a60dceb793f97f779ec3ea https://www.encodeproject.org/files/ENCFF000PUT/@@download/ENCFF000PUT.fastq.gz HiSeq 2000 /files/ENCFF000PVZ/ released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UIQ bed broadPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 1 1037954 Richard Myers, HAIB 8bc179500074f2471e742e093c18fe54 https://www.encodeproject.org/files/ENCFF001UIQ/@@download/ENCFF001UIQ.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UIR bed broadPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 1 350910 Richard Myers, HAIB 832f96b2ca906cc4ff1d91a4a96f16e5 https://www.encodeproject.org/files/ENCFF001UIR/@@download/ENCFF001UIR.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF155RGC bam unfiltered alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUT, ENCFF643CGH 1128568102 ENCODE Processing Pipeline 36286393958aa0b7670701a7485331dd https://www.encodeproject.org/files/ENCFF155RGC/@@download/ENCFF155RGC.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF599RTB bam unfiltered alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUS, ENCFF643CGH 1307520905 ENCODE Processing Pipeline 108f6145895e5763a66506b297bb4842 https://www.encodeproject.org/files/ENCFF599RTB/@@download/ENCFF599RTB.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF292UNW bam alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUT, ENCFF643CGH 818624080 ENCODE Processing Pipeline e5c7de678db2c1362378553401d69c31 https://www.encodeproject.org/files/ENCFF292UNW/@@download/ENCFF292UNW.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF031PGD bam alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUS, ENCFF643CGH 882275737 ENCODE Processing Pipeline 5675b3c647c49ba696912f2f221b12c7 https://www.encodeproject.org/files/ENCFF031PGD/@@download/ENCFF031PGD.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF436BMH bam alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUT, ENCFF807MUK 818890100 ENCODE Processing Pipeline 90e09de432ddb79ba3e0d5e9356b0bbd https://www.encodeproject.org/files/ENCFF436BMH/@@download/ENCFF436BMH.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF112SLR bam unfiltered alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUT, ENCFF807MUK 1124353988 ENCODE Processing Pipeline ccc2daf1810c4f1d8851a2eed67e6492 https://www.encodeproject.org/files/ENCFF112SLR/@@download/ENCFF112SLR.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF822WIL bam alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUS, ENCFF807MUK 882620732 ENCODE Processing Pipeline 1bc9751958ee737c0542b0999c461627 https://www.encodeproject.org/files/ENCFF822WIL/@@download/ENCFF822WIL.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF472GBS bam unfiltered alignments ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUS, ENCFF807MUK 1305109269 ENCODE Processing Pipeline 5b359ce80cb0ba58ce542e58aca03844 https://www.encodeproject.org/files/ENCFF472GBS/@@download/ENCFF472GBS.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF108LDX bigWig signal p-value ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF407WPP, ENCFF822WIL, ENCFF880DIZ 547032298 ENCODE Processing Pipeline 53d5a9780f510ca179ae235d8f369a94 https://www.encodeproject.org/files/ENCFF108LDX/@@download/ENCFF108LDX.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF360RRD bigWig fold change over control ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF407WPP, ENCFF822WIL, ENCFF880DIZ 392326962 ENCODE Processing Pipeline b2d92d6374779f5c6906215c8d8b4873 https://www.encodeproject.org/files/ENCFF360RRD/@@download/ENCFF360RRD.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF488HSO bigWig signal p-value ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF407WPP, ENCFF436BMH, ENCFF880DIZ 582969782 ENCODE Processing Pipeline 9955f30079e83eccdc76702f4171bc1d https://www.encodeproject.org/files/ENCFF488HSO/@@download/ENCFF488HSO.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF857PRW bigWig fold change over control ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF407WPP, ENCFF436BMH, ENCFF880DIZ 353527997 ENCODE Processing Pipeline 8217b357db56059e593e7f41f290a482 https://www.encodeproject.org/files/ENCFF857PRW/@@download/ENCFF857PRW.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF306ETS bigWig fold change over control ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF407WPP, ENCFF436BMH, ENCFF822WIL, ENCFF880DIZ 661578767 ENCODE Processing Pipeline b48b863c079179b94adc7f618d22a39c https://www.encodeproject.org/files/ENCFF306ETS/@@download/ENCFF306ETS.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF333IHO bigWig fold change over control ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF292UNW, ENCFF414MKM, ENCFF895MWF 362450397 ENCODE Processing Pipeline 49e3f3886c32567aad5101d9621003e2 https://www.encodeproject.org/files/ENCFF333IHO/@@download/ENCFF333IHO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF841EZP bigBed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF129BKD 11847249 ENCODE Processing Pipeline 80e6412393ef94d7c4ed6fd1837c3e9e https://www.encodeproject.org/files/ENCFF841EZP/@@download/ENCFF841EZP.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF046GZZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF797QGP 1715107 ENCODE Processing Pipeline 732bd2b4902e2b045320f9c065074037 https://www.encodeproject.org/files/ENCFF046GZZ/@@download/ENCFF046GZZ.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF681HCY bigWig signal p-value ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF407WPP, ENCFF436BMH, ENCFF822WIL, ENCFF880DIZ 718237905 ENCODE Processing Pipeline efc3c44bd957d43c9ebdf279c0582cab https://www.encodeproject.org/files/ENCFF681HCY/@@download/ENCFF681HCY.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF446FKN bed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF407WPP, ENCFF436BMH, ENCFF880DIZ 4259610 ENCODE Processing Pipeline 35279264f3e0ab7e73c32584f3fdb451 https://www.encodeproject.org/files/ENCFF446FKN/@@download/ENCFF446FKN.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF214RQX bed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF407WPP, ENCFF436BMH, ENCFF822WIL, ENCFF880DIZ 6015013 ENCODE Processing Pipeline 394b538601a76152df16e47a7ec1c156 https://www.encodeproject.org/files/ENCFF214RQX/@@download/ENCFF214RQX.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF935IFD bigWig signal p-value ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF031PGD, ENCFF292UNW, ENCFF414MKM, ENCFF895MWF 709897593 ENCODE Processing Pipeline 1e23f364263dd959701f766c9ea15195 https://www.encodeproject.org/files/ENCFF935IFD/@@download/ENCFF935IFD.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF113GYB bed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF292UNW, ENCFF414MKM, ENCFF895MWF 4221477 ENCODE Processing Pipeline ee127509dc07325a7d1aa4fd3c9657c8 https://www.encodeproject.org/files/ENCFF113GYB/@@download/ENCFF113GYB.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF567RGM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF587OBC 1672644 ENCODE Processing Pipeline 2175bcd633e8bea66ad5de3c26887648 https://www.encodeproject.org/files/ENCFF567RGM/@@download/ENCFF567RGM.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF129BKD bed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF031PGD, ENCFF292UNW, ENCFF414MKM, ENCFF895MWF 6072652 ENCODE Processing Pipeline 8426cf391b963e2eb7ff5cfd538889ee https://www.encodeproject.org/files/ENCFF129BKD/@@download/ENCFF129BKD.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF163CDC bigBed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF113GYB 8609320 ENCODE Processing Pipeline dbf457cff00e32a42f9543d74312d9ef https://www.encodeproject.org/files/ENCFF163CDC/@@download/ENCFF163CDC.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF707EYZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF506PIV 1234730 ENCODE Processing Pipeline 1b8051e306b2d3e3f925db94d71ea45c https://www.encodeproject.org/files/ENCFF707EYZ/@@download/ENCFF707EYZ.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF797QGP bed narrowPeak optimal idr thresholded peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF030HUB, ENCFF113GYB, ENCFF129BKD, ENCFF419RSJ 1060794 ENCODE Processing Pipeline a7f6b6029d8b4d63e84cc256cea4ac1a https://www.encodeproject.org/files/ENCFF797QGP/@@download/ENCFF797QGP.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF670PLH bed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF407WPP, ENCFF822WIL, ENCFF880DIZ 5580846 ENCODE Processing Pipeline 808c31c7fb40747e64618122e7ca6bbc https://www.encodeproject.org/files/ENCFF670PLH/@@download/ENCFF670PLH.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF655YEK bigBed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF446FKN 8651950 ENCODE Processing Pipeline bf070b7dd63523566fe6cb896f51491f https://www.encodeproject.org/files/ENCFF655YEK/@@download/ENCFF655YEK.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF037MFL bed narrowPeak conservative idr thresholded peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF214RQX, ENCFF446FKN, ENCFF670PLH 668411 ENCODE Processing Pipeline f22f01bb8fa69d1841a233169f2f8af6 https://www.encodeproject.org/files/ENCFF037MFL/@@download/ENCFF037MFL.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF587OBC bed narrowPeak optimal idr thresholded peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF214RQX, ENCFF446FKN, ENCFF670PLH 1034005 ENCODE Processing Pipeline cba9d4271e9a0b4f2f4e5cdbdb04fa29 https://www.encodeproject.org/files/ENCFF587OBC/@@download/ENCFF587OBC.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF784SGM bigWig signal p-value ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 2 ENCFF292UNW, ENCFF414MKM, ENCFF895MWF 582854385 ENCODE Processing Pipeline 74c24fd5660aa20552b188a706541317 https://www.encodeproject.org/files/ENCFF784SGM/@@download/ENCFF784SGM.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF973NJP bigWig fold change over control ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF031PGD, ENCFF292UNW, ENCFF414MKM, ENCFF895MWF 664450696 ENCODE Processing Pipeline 2ad746a0aa546b844360053b2e5c1b53 https://www.encodeproject.org/files/ENCFF973NJP/@@download/ENCFF973NJP.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF506PIV bed narrowPeak conservative idr thresholded peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF030HUB, ENCFF113GYB, ENCFF129BKD, ENCFF419RSJ 686572 ENCODE Processing Pipeline 598ac703f28df09cbe537ca068f7333b https://www.encodeproject.org/files/ENCFF506PIV/@@download/ENCFF506PIV.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF523ZRL bigBed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF670PLH 11358113 ENCODE Processing Pipeline 877c51d6a97bc9415c517758dfd2b744 https://www.encodeproject.org/files/ENCFF523ZRL/@@download/ENCFF523ZRL.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF948FSD bigBed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF214RQX 11766142 ENCODE Processing Pipeline 7e9592384c35030122fdf1ccc20c2984 https://www.encodeproject.org/files/ENCFF948FSD/@@download/ENCFF948FSD.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF963KJK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF037MFL 1204035 ENCODE Processing Pipeline 0bfe687b156a3f3a47770c9b705aa8e6 https://www.encodeproject.org/files/ENCFF963KJK/@@download/ENCFF963KJK.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF741OCP bigWig signal p-value ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF031PGD, ENCFF414MKM, ENCFF895MWF 541533042 ENCODE Processing Pipeline 95f095281ff37b76bbf7df99652009fb https://www.encodeproject.org/files/ENCFF741OCP/@@download/ENCFF741OCP.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF530EOD bigWig fold change over control ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF031PGD, ENCFF414MKM, ENCFF895MWF 395883661 ENCODE Processing Pipeline c7f62538e4e5385c5269e4a495436413 https://www.encodeproject.org/files/ENCFF530EOD/@@download/ENCFF530EOD.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF030HUB bed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF031PGD, ENCFF414MKM, ENCFF895MWF 5577493 ENCODE Processing Pipeline dcca5c2927a9dda6319d0db72cef1622 https://www.encodeproject.org/files/ENCFF030HUB/@@download/ENCFF030HUB.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF740VAC bigBed narrowPeak peaks ENCSR000BUW ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2012-09-10 ENCODE 1 ENCFF030HUB 11360223 ENCODE Processing Pipeline 97d99392ceb911f07131ff5d92579e50 https://www.encodeproject.org/files/ENCFF740VAC/@@download/ENCFF740VAC.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF164ZCN fastq reads ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 1 50 single-ended 2350469488 Richard Myers, HAIB 6d9c13e0c8526c275d0281d75b3038d2 SRA:SRR5331454 https://www.encodeproject.org/files/ENCFF164ZCN/@@download/ENCFF164ZCN.fastq.gz HiSeq 2000 /files/ENCFF929JYK/ released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF671BGZ fastq reads ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 1 50 single-ended 2535728589 Richard Myers, HAIB 87befb7d0597a866b769b88f6562d334 SRA:SRR5331455 https://www.encodeproject.org/files/ENCFF671BGZ/@@download/ENCFF671BGZ.fastq.gz HiSeq 2000 /files/ENCFF158AFC/ released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF270HZT bam alignments ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 50 ENCFF671BGZ, ENCFF807MUK 1747599538 ENCODE Processing Pipeline 816f9a1b387b2952975006ca0f90432e https://www.encodeproject.org/files/ENCFF270HZT/@@download/ENCFF270HZT.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF821FIW bam alignments ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 50 ENCFF164ZCN, ENCFF807MUK 1641032399 ENCODE Processing Pipeline 07f769a64523a51a2c435aa8e035c9e6 https://www.encodeproject.org/files/ENCFF821FIW/@@download/ENCFF821FIW.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF190PTX bigWig signal p-value ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF359TIO, ENCFF807CUF, ENCFF821FIW 1122566023 ENCODE Processing Pipeline 9abe724c97bcc1c11096c3fa5db4a4b2 https://www.encodeproject.org/files/ENCFF190PTX/@@download/ENCFF190PTX.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF976JHF bigWig signal p-value ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF270HZT, ENCFF359TIO 691088379 ENCODE Processing Pipeline 9793f2ac913b28e0fddd04b69cc60485 https://www.encodeproject.org/files/ENCFF976JHF/@@download/ENCFF976JHF.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF227CPQ bigWig signal p-value ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF270HZT, ENCFF359TIO, ENCFF807CUF, ENCFF821FIW 1397141955 ENCODE Processing Pipeline e49b96598d23ba22d7ed7afe2743ca02 https://www.encodeproject.org/files/ENCFF227CPQ/@@download/ENCFF227CPQ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF825RFZ bigWig fold change over control ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF359TIO, ENCFF807CUF, ENCFF821FIW 1057291705 ENCODE Processing Pipeline 996d483df4b767d29a2eeab7c5ff5cbb https://www.encodeproject.org/files/ENCFF825RFZ/@@download/ENCFF825RFZ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF702CLK bigWig fold change over control ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF270HZT, ENCFF359TIO 837435760 ENCODE Processing Pipeline 0d396dfd207b316abf3de0baec43eb52 https://www.encodeproject.org/files/ENCFF702CLK/@@download/ENCFF702CLK.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF110WCE bigWig fold change over control ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF270HZT, ENCFF359TIO, ENCFF807CUF, ENCFF821FIW 1636096643 ENCODE Processing Pipeline 1d6000c683d449db6691396d27cbc773 https://www.encodeproject.org/files/ENCFF110WCE/@@download/ENCFF110WCE.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF054NTL bigBed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF624XKD 13609636 ENCODE Processing Pipeline 0d729e6cd33ba9028cf6825b4231c7cd https://www.encodeproject.org/files/ENCFF054NTL/@@download/ENCFF054NTL.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF624XKD bed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF270HZT, ENCFF359TIO 6725905 ENCODE Processing Pipeline 3517b46ca96b254234976888869e2bfa https://www.encodeproject.org/files/ENCFF624XKD/@@download/ENCFF624XKD.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF764GOO bigBed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF950LOX 13914415 ENCODE Processing Pipeline 07bbbb45d423786ae009c33e65a53bd5 https://www.encodeproject.org/files/ENCFF764GOO/@@download/ENCFF764GOO.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF484NEU bigBed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF974XKH 13859177 ENCODE Processing Pipeline 83bb4de5fe1f00c4410c56e61c7b0a8b https://www.encodeproject.org/files/ENCFF484NEU/@@download/ENCFF484NEU.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF950LOX bed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF359TIO, ENCFF807CUF, ENCFF821FIW 6769628 ENCODE Processing Pipeline 21664ea95b8533ac6d45884f5355a655 https://www.encodeproject.org/files/ENCFF950LOX/@@download/ENCFF950LOX.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF974XKH bed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF270HZT, ENCFF359TIO, ENCFF807CUF, ENCFF821FIW 7031021 ENCODE Processing Pipeline def045c685301d24181ace0d3c24bcaf https://www.encodeproject.org/files/ENCFF974XKH/@@download/ENCFF974XKH.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF051AWW bam unfiltered alignments ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 50 ENCFF643CGH, ENCFF671BGZ 2458233246 ENCODE Processing Pipeline 46016ddbe448ae767320d498237e3df3 https://www.encodeproject.org/files/ENCFF051AWW/@@download/ENCFF051AWW.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF049UHF bam unfiltered alignments ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 50 ENCFF164ZCN, ENCFF643CGH 2321371815 ENCODE Processing Pipeline 0a619b46dc36531429981cd636d6faa0 https://www.encodeproject.org/files/ENCFF049UHF/@@download/ENCFF049UHF.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF285HJN bam alignments ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 50 ENCFF643CGH, ENCFF671BGZ 1747536992 ENCODE Processing Pipeline 2f4e2f24d84aadf6b29e9edd46d03aec https://www.encodeproject.org/files/ENCFF285HJN/@@download/ENCFF285HJN.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF232KLY bam alignments ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 50 ENCFF164ZCN, ENCFF643CGH 1641139028 ENCODE Processing Pipeline b400c4668e55cad178d5b47eb61c5aff https://www.encodeproject.org/files/ENCFF232KLY/@@download/ENCFF232KLY.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF045SSF bigWig signal p-value ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF232KLY, ENCFF406XEH, ENCFF985NSN 1147870809 ENCODE Processing Pipeline d275302e0edb3e33294f8a984c026c8c https://www.encodeproject.org/files/ENCFF045SSF/@@download/ENCFF045SSF.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF898ZZX bigWig signal p-value ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF285HJN, ENCFF985NSN 691773453 ENCODE Processing Pipeline ec236de64adade90cca6e963619c611a https://www.encodeproject.org/files/ENCFF898ZZX/@@download/ENCFF898ZZX.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF228PIN bigWig fold change over control ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF232KLY, ENCFF406XEH, ENCFF985NSN 1064413248 ENCODE Processing Pipeline c0bcbe1128d2884cb3a02eb9511ec9a3 https://www.encodeproject.org/files/ENCFF228PIN/@@download/ENCFF228PIN.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF181VIB bigWig signal p-value ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF232KLY, ENCFF285HJN, ENCFF406XEH, ENCFF985NSN 1397158876 ENCODE Processing Pipeline 204a9658eec4b01c2e620cadc4180e9b https://www.encodeproject.org/files/ENCFF181VIB/@@download/ENCFF181VIB.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF647UGS bigWig fold change over control ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF285HJN, ENCFF985NSN 838184219 ENCODE Processing Pipeline cd03837fb25c799d3a3325130035f6cc https://www.encodeproject.org/files/ENCFF647UGS/@@download/ENCFF647UGS.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF299FAH bigWig fold change over control ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF232KLY, ENCFF285HJN, ENCFF406XEH, ENCFF985NSN 1637123436 ENCODE Processing Pipeline 36994fb0390bc07e7ec5da41d1f9134b https://www.encodeproject.org/files/ENCFF299FAH/@@download/ENCFF299FAH.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF443IDR bed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF285HJN, ENCFF985NSN 6672648 ENCODE Processing Pipeline fe13414f179477a815c1947e97056d91 https://www.encodeproject.org/files/ENCFF443IDR/@@download/ENCFF443IDR.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF650YEI bigBed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF063UKS 13866185 ENCODE Processing Pipeline d938dff13953036f15c6b3e0aabfae7b https://www.encodeproject.org/files/ENCFF650YEI/@@download/ENCFF650YEI.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF236MJY bigBed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF443IDR 13647254 ENCODE Processing Pipeline e81280a68c269c28d14b6e9437b3f62a https://www.encodeproject.org/files/ENCFF236MJY/@@download/ENCFF236MJY.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF645KBN bed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF232KLY, ENCFF406XEH, ENCFF985NSN 6664069 ENCODE Processing Pipeline 2c2692aae326fb63907f4e88fe4192e8 https://www.encodeproject.org/files/ENCFF645KBN/@@download/ENCFF645KBN.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF063UKS bed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF232KLY, ENCFF285HJN, ENCFF406XEH, ENCFF985NSN 7006170 ENCODE Processing Pipeline c355acfb2ad3833e93f0a8d2a6ccb170 https://www.encodeproject.org/files/ENCFF063UKS/@@download/ENCFF063UKS.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF060AKT bigBed narrowPeak peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF645KBN 13887716 ENCODE Processing Pipeline e8d9866ff27120ef2b724c99273216ee https://www.encodeproject.org/files/ENCFF060AKT/@@download/ENCFF060AKT.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF556AEV bed narrowPeak conservative idr thresholded peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF063UKS, ENCFF419RSJ, ENCFF443IDR, ENCFF645KBN 1343745 ENCODE Processing Pipeline aeaaf3f4e37b3a66c6d71e39b1873a98 https://www.encodeproject.org/files/ENCFF556AEV/@@download/ENCFF556AEV.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF197VVF bigBed narrowPeak conservative idr thresholded peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF556AEV 2570981 ENCODE Processing Pipeline 5b0253335a4a68e973bc20095b65e169 https://www.encodeproject.org/files/ENCFF197VVF/@@download/ENCFF197VVF.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF295GOD bed narrowPeak optimal idr thresholded peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF063UKS, ENCFF419RSJ, ENCFF443IDR, ENCFF645KBN 1457715 ENCODE Processing Pipeline e50fba920f9d445b01aa16efa5c27456 https://www.encodeproject.org/files/ENCFF295GOD/@@download/ENCFF295GOD.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF244GNC bigBed narrowPeak optimal idr thresholded peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF295GOD 2732955 ENCODE Processing Pipeline 9b9ec93edc528b3639e8db3ecba25b50 https://www.encodeproject.org/files/ENCFF244GNC/@@download/ENCFF244GNC.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF427XJF bed narrowPeak conservative idr thresholded peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF624XKD, ENCFF950LOX, ENCFF974XKH 1236524 ENCODE Processing Pipeline cd97d1218ea41666662d2c659846cca5 https://www.encodeproject.org/files/ENCFF427XJF/@@download/ENCFF427XJF.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF718RZO bigBed narrowPeak conservative idr thresholded peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF427XJF 2405940 ENCODE Processing Pipeline 16e07e2c594458ca35f8385cdce8a3a9 https://www.encodeproject.org/files/ENCFF718RZO/@@download/ENCFF718RZO.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF708GMO bed narrowPeak optimal idr thresholded peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF624XKD, ENCFF950LOX, ENCFF974XKH 1336347 ENCODE Processing Pipeline 7e9fff1df0984cd791bec85be62f671a https://www.encodeproject.org/files/ENCFF708GMO/@@download/ENCFF708GMO.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF920XVN bigBed narrowPeak optimal idr thresholded peaks ENCSR230ZWH ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF708GMO 2537026 ENCODE Processing Pipeline e2f713ada7983d310b5ba9467d8f5e81 https://www.encodeproject.org/files/ENCFF920XVN/@@download/ENCFF920XVN.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000PEW bigBed broadPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFC 377562 Richard Myers, HAIB ed5ddb16bc9a97e1b0ac0cc68b3ff18a https://www.encodeproject.org/files/ENCFF000PEW/@@download/ENCFF000PEW.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PEX bigBed broadPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFD 557092 Richard Myers, HAIB 21d4677cb16e62d50b4de38405f071d7 https://www.encodeproject.org/files/ENCFF000PEX/@@download/ENCFF000PEX.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PEY bam alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PFJ 681160956 Richard Myers, HAIB 983ccd14bdd71094e49f54cde2102ecf https://www.encodeproject.org/files/ENCFF000PEY/@@download/ENCFF000PEY.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PEZ bam alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PFL 1099965740 Richard Myers, HAIB e30d6f6cbd6e0f6a0a9cedf9669ac900 https://www.encodeproject.org/files/ENCFF000PEZ/@@download/ENCFF000PEZ.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PFA bigWig raw signal ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 20148347 Richard Myers, HAIB 10142c442eb54b4b1f855aa3b1dab381 https://www.encodeproject.org/files/ENCFF000PFA/@@download/ENCFF000PFA.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PFB bigWig raw signal ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 15981007 Richard Myers, HAIB f960746352fdc71b0421f1b509b5e8ee https://www.encodeproject.org/files/ENCFF000PFB/@@download/ENCFF000PFB.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PFJ fastq reads ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1037539428 Richard Myers, HAIB 3fba5f22598a20d54b50346a6cc9f020 https://www.encodeproject.org/files/ENCFF000PFJ/@@download/ENCFF000PFJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PFD/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PFL fastq reads ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1395411259 Richard Myers, HAIB e9b64f9fe3d80bec3496eaf5a00fb204 https://www.encodeproject.org/files/ENCFF000PFL/@@download/ENCFF000PFL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PFD/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF001UFC bed broadPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 193935 Richard Myers, HAIB f30b0e5ee2eb7202b4f7b932de67a484 https://www.encodeproject.org/files/ENCFF001UFC/@@download/ENCFF001UFC.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UFD bed broadPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 333421 Richard Myers, HAIB ca65fa9b20ea44f8108fdf1c82cbaf3e https://www.encodeproject.org/files/ENCFF001UFD/@@download/ENCFF001UFD.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CKA bed narrowPeak optimal idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 346694 ENCODE Consortium Analysis Working Group d2923dff41466751318a0e525898a21d https://www.encodeproject.org/files/ENCFF002CKA/@@download/ENCFF002CKA.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF504PEN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE ENCFF002CKA 856676 ENCODE Consortium a497f8f63b393ed5653411ab3bee8527 https://www.encodeproject.org/files/ENCFF504PEN/@@download/ENCFF504PEN.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF876YIT bam unfiltered alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFJ, ENCFF643CGH 1224503564 ENCODE Processing Pipeline fd84255d4632271f9b90accc58a97795 https://www.encodeproject.org/files/ENCFF876YIT/@@download/ENCFF876YIT.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF367RFV bam alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFJ, ENCFF643CGH 471915662 ENCODE Processing Pipeline 12c6d0163d2bae0241bfda248bf8fea0 https://www.encodeproject.org/files/ENCFF367RFV/@@download/ENCFF367RFV.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF588BOD bam unfiltered alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFL, ENCFF643CGH 1696527917 ENCODE Processing Pipeline 5ab9da3e00417dbe20b4d5aba1ab75fb https://www.encodeproject.org/files/ENCFF588BOD/@@download/ENCFF588BOD.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF459LGD bam alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFL, ENCFF643CGH 711829995 ENCODE Processing Pipeline 89f95d116b4eb79c8c254789f0ebe29e https://www.encodeproject.org/files/ENCFF459LGD/@@download/ENCFF459LGD.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF793OVX bam unfiltered alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFJ, ENCFF807MUK 1221331749 ENCODE Processing Pipeline ae8226b0892f5cd420cf6dcb67fd9fe0 https://www.encodeproject.org/files/ENCFF793OVX/@@download/ENCFF793OVX.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF352NJI bam alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFJ, ENCFF807MUK 472079210 ENCODE Processing Pipeline fc5d57bceea5450b2f09ab7f9381b51b https://www.encodeproject.org/files/ENCFF352NJI/@@download/ENCFF352NJI.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF050BAB bam unfiltered alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFL, ENCFF807MUK 1689720605 ENCODE Processing Pipeline 03152d1be34a41afbaed58e094756654 https://www.encodeproject.org/files/ENCFF050BAB/@@download/ENCFF050BAB.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF654DIS bam alignments ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFL, ENCFF807MUK 712116205 ENCODE Processing Pipeline f1ecfcf0a544a79d292ed79094b179d2 https://www.encodeproject.org/files/ENCFF654DIS/@@download/ENCFF654DIS.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF557LLY bigWig signal p-value ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044MEQ, ENCFF352NJI 364959613 ENCODE Processing Pipeline eba5410ca8e2fc2ae7ae92572b507ab1 https://www.encodeproject.org/files/ENCFF557LLY/@@download/ENCFF557LLY.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF472QUP bigWig signal p-value ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF044MEQ, ENCFF654DIS 494405886 ENCODE Processing Pipeline bef3f1a0631b8d755be3a5755a1bf68e https://www.encodeproject.org/files/ENCFF472QUP/@@download/ENCFF472QUP.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF299SHS bigWig signal p-value ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044MEQ, ENCFF352NJI, ENCFF654DIS 503199284 ENCODE Processing Pipeline 6493533cd217dc18d15f971de6085e8c https://www.encodeproject.org/files/ENCFF299SHS/@@download/ENCFF299SHS.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF701YXF bigWig fold change over control ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF044MEQ, ENCFF654DIS 297265974 ENCODE Processing Pipeline 84c6afbfc88d406ed319e88eff517068 https://www.encodeproject.org/files/ENCFF701YXF/@@download/ENCFF701YXF.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF662EBQ bigWig fold change over control ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044MEQ, ENCFF352NJI 199031172 ENCODE Processing Pipeline 92972f7c8e2bff2433a9ebb4495b5a76 https://www.encodeproject.org/files/ENCFF662EBQ/@@download/ENCFF662EBQ.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF891SYJ bigWig fold change over control ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044MEQ, ENCFF352NJI, ENCFF654DIS 442630826 ENCODE Processing Pipeline c4a8ac2e7549eb44ddcc327f00e4d67b https://www.encodeproject.org/files/ENCFF891SYJ/@@download/ENCFF891SYJ.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF558HCQ bed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF044MEQ, ENCFF654DIS 3913119 ENCODE Processing Pipeline 62240f1162f1f1d0eb4f3b039ece7872 https://www.encodeproject.org/files/ENCFF558HCQ/@@download/ENCFF558HCQ.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF570CST bed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044MEQ, ENCFF352NJI 3984799 ENCODE Processing Pipeline 69bb711c8f182fb057f23125c2984743 https://www.encodeproject.org/files/ENCFF570CST/@@download/ENCFF570CST.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF533OIU bed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044MEQ, ENCFF352NJI, ENCFF654DIS 4988837 ENCODE Processing Pipeline cd8ee5cf4759c1221517536f34ff0e38 https://www.encodeproject.org/files/ENCFF533OIU/@@download/ENCFF533OIU.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF762ZEN bigBed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF558HCQ 8333321 ENCODE Processing Pipeline b7d7fe7fec8b6e7a349838ecff942ef2 https://www.encodeproject.org/files/ENCFF762ZEN/@@download/ENCFF762ZEN.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF411DEG bigBed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF570CST 9163130 ENCODE Processing Pipeline 093ceb17b978109baf9ae56b63c52b74 https://www.encodeproject.org/files/ENCFF411DEG/@@download/ENCFF411DEG.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF616ASX bigBed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF533OIU 11124396 ENCODE Processing Pipeline bb6d5cbbf20f0a14c27f67ffb6724e85 https://www.encodeproject.org/files/ENCFF616ASX/@@download/ENCFF616ASX.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF174BWR bed narrowPeak conservative idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF533OIU, ENCFF558HCQ, ENCFF570CST 242225 ENCODE Processing Pipeline 44227bb55d9de5c5fe7844d3deada44e https://www.encodeproject.org/files/ENCFF174BWR/@@download/ENCFF174BWR.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF222JEP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF174BWR 476453 ENCODE Processing Pipeline ba26f61f0baf99f04d0bc4c749525a99 https://www.encodeproject.org/files/ENCFF222JEP/@@download/ENCFF222JEP.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF305QDB bed narrowPeak optimal idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF533OIU, ENCFF558HCQ, ENCFF570CST 312444 ENCODE Processing Pipeline 212dacefd25c5361bc1b2e5400f36d9c https://www.encodeproject.org/files/ENCFF305QDB/@@download/ENCFF305QDB.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF725DDJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF305QDB 693547 ENCODE Processing Pipeline 91acb947ea0d0c19c4479bfd3c121687 https://www.encodeproject.org/files/ENCFF725DDJ/@@download/ENCFF725DDJ.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF147UKA bigWig fold change over control ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF202PGY, ENCFF367RFV, ENCFF459LGD 442461855 ENCODE Processing Pipeline 8dfd939f545a155cf6c7e083be551bde https://www.encodeproject.org/files/ENCFF147UKA/@@download/ENCFF147UKA.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF869PER bigWig signal p-value ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF202PGY, ENCFF367RFV 397419362 ENCODE Processing Pipeline 0d7ef7eeb79e99f0edf2bff81859f4e6 https://www.encodeproject.org/files/ENCFF869PER/@@download/ENCFF869PER.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF556YJV bigWig signal p-value ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF202PGY, ENCFF367RFV, ENCFF459LGD 502873338 ENCODE Processing Pipeline fbe7f297c2686b69776f88ac10ced298 https://www.encodeproject.org/files/ENCFF556YJV/@@download/ENCFF556YJV.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF967CRV bigWig fold change over control ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF459LGD 299843965 ENCODE Processing Pipeline c938161d09b7313b1f987afe81ce6be4 https://www.encodeproject.org/files/ENCFF967CRV/@@download/ENCFF967CRV.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF160JWE bed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF202PGY, ENCFF367RFV, ENCFF459LGD 5015990 ENCODE Processing Pipeline 99224ccf37c6aef4c94c1e8301162b7f https://www.encodeproject.org/files/ENCFF160JWE/@@download/ENCFF160JWE.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF098PZH bigBed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF427ZET 9146486 ENCODE Processing Pipeline 4fc2c66d37959572fdbc5b60a13e6624 https://www.encodeproject.org/files/ENCFF098PZH/@@download/ENCFF098PZH.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF958DUA bigWig fold change over control ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF202PGY, ENCFF367RFV 207831143 ENCODE Processing Pipeline d2c4eab886c1f9e93a0c3a7cc562ddc1 https://www.encodeproject.org/files/ENCFF958DUA/@@download/ENCFF958DUA.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF427ZET bed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF202PGY, ENCFF367RFV 3984004 ENCODE Processing Pipeline 5af85c641221c31eb2ba93ab7bbea18b https://www.encodeproject.org/files/ENCFF427ZET/@@download/ENCFF427ZET.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF857UJJ bigBed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF609JKB 8333727 ENCODE Processing Pipeline ad12e076b36c176bbf5c983d36aa2bb6 https://www.encodeproject.org/files/ENCFF857UJJ/@@download/ENCFF857UJJ.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF504XLW bigBed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF160JWE 11164263 ENCODE Processing Pipeline 060bc1dd238cfdbaf35621a75a8d1862 https://www.encodeproject.org/files/ENCFF504XLW/@@download/ENCFF504XLW.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF838EBD bigWig signal p-value ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF459LGD 408450330 ENCODE Processing Pipeline 4d18daa76c2a5c8394155f9a95ccc161 https://www.encodeproject.org/files/ENCFF838EBD/@@download/ENCFF838EBD.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF278XOE bed narrowPeak optimal idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF160JWE, ENCFF419RSJ, ENCFF427ZET, ENCFF609JKB 325860 ENCODE Processing Pipeline 4a65170393f739c541a348f992053dce https://www.encodeproject.org/files/ENCFF278XOE/@@download/ENCFF278XOE.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF609JKB bed narrowPeak peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF459LGD 3909498 ENCODE Processing Pipeline 4a1b99c931c164ba16dc02b673227430 https://www.encodeproject.org/files/ENCFF609JKB/@@download/ENCFF609JKB.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF599XJI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF278XOE 713368 ENCODE Processing Pipeline 4ee561da06ac878143a3213591227eda https://www.encodeproject.org/files/ENCFF599XJI/@@download/ENCFF599XJI.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF769HVQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF557UKG 590693 ENCODE Processing Pipeline 4824f823cc8267db47dfc1b3c9e55735 https://www.encodeproject.org/files/ENCFF769HVQ/@@download/ENCFF769HVQ.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF557UKG bed narrowPeak conservative idr thresholded peaks ENCSR000BHT ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF160JWE, ENCFF419RSJ, ENCFF427ZET, ENCFF609JKB 250716 ENCODE Processing Pipeline ea319e7d52af70ed2e591ad444d1376a https://www.encodeproject.org/files/ENCFF557UKG/@@download/ENCFF557UKG.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF780YNX fastq reads ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1450232534 Richard Myers, HAIB 4d7157cc6936e34ad742f06fffd434ce SRA:SRR5338891 https://www.encodeproject.org/files/ENCFF780YNX/@@download/ENCFF780YNX.fastq.gz HiSeq 2000 /files/ENCFF737ELZ/ released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF108ORY fastq reads ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1415122449 Richard Myers, HAIB 0e58c561bbe82b1660a19d0303ffc27e SRA:SRR5338890 https://www.encodeproject.org/files/ENCFF108ORY/@@download/ENCFF108ORY.fastq.gz HiSeq 2000 /files/ENCFF272WBE/ released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF552ZAM bam alignments ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF780YNX, ENCFF807MUK 1204041905 ENCODE Processing Pipeline f4187135a13359593d445c4a8a434b1d https://www.encodeproject.org/files/ENCFF552ZAM/@@download/ENCFF552ZAM.bam hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF574HZP bam alignments ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF108ORY, ENCFF807MUK 1090911474 ENCODE Processing Pipeline 08f8be8a02132ba39d41dde577cc914a https://www.encodeproject.org/files/ENCFF574HZP/@@download/ENCFF574HZP.bam hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF826RXZ bigWig signal p-value ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF108FPL, ENCFF574HZP, ENCFF969DYI 899907376 ENCODE Processing Pipeline b98796625c54350619f35c2ad8f8eb9d https://www.encodeproject.org/files/ENCFF826RXZ/@@download/ENCFF826RXZ.bigWig hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF546QAZ bigWig signal p-value ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF108FPL, ENCFF552ZAM, ENCFF969DYI 757867657 ENCODE Processing Pipeline 9570f0039ed037e11995eece4bbf0c45 https://www.encodeproject.org/files/ENCFF546QAZ/@@download/ENCFF546QAZ.bigWig hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF560CBM bigWig fold change over control ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF108FPL, ENCFF552ZAM, ENCFF969DYI 796141662 ENCODE Processing Pipeline d1305415f2cd3877e9c8f3c878eb1dd5 https://www.encodeproject.org/files/ENCFF560CBM/@@download/ENCFF560CBM.bigWig hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF485BRF bigWig signal p-value ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF108FPL, ENCFF552ZAM, ENCFF574HZP, ENCFF969DYI 1065483337 ENCODE Processing Pipeline 0a6b890de1200c1d567e62e2bdbedf45 https://www.encodeproject.org/files/ENCFF485BRF/@@download/ENCFF485BRF.bigWig hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF195NTH bigWig fold change over control ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF108FPL, ENCFF574HZP, ENCFF969DYI 682620825 ENCODE Processing Pipeline 951329a24f86b17b071a8425bd8b845a https://www.encodeproject.org/files/ENCFF195NTH/@@download/ENCFF195NTH.bigWig hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF649MCA bed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF108FPL, ENCFF552ZAM, ENCFF969DYI 6570142 ENCODE Processing Pipeline f9e2d5a849ef987451e1e89cff10606c https://www.encodeproject.org/files/ENCFF649MCA/@@download/ENCFF649MCA.bed.gz hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF112KXB bigBed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF649MCA 13441857 ENCODE Processing Pipeline f6097d3ee22282ab92fc00407f7716ff https://www.encodeproject.org/files/ENCFF112KXB/@@download/ENCFF112KXB.bigBed hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF487OSZ bed narrowPeak conservative idr thresholded peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF289JSG, ENCFF524UVY, ENCFF649MCA 503280 ENCODE Processing Pipeline b29d2f9d7f90bde09a8f380104f5fbf1 https://www.encodeproject.org/files/ENCFF487OSZ/@@download/ENCFF487OSZ.bed.gz hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF311DTN bigBed narrowPeak conservative idr thresholded peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF487OSZ 1019151 ENCODE Processing Pipeline 8927cf39b2d9413b25b33bac7957905a https://www.encodeproject.org/files/ENCFF311DTN/@@download/ENCFF311DTN.bigBed hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF347BWE bigBed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF289JSG 13456980 ENCODE Processing Pipeline dc84b8689868f727be7861b1e21cb8f0 https://www.encodeproject.org/files/ENCFF347BWE/@@download/ENCFF347BWE.bigBed hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF531KWT bigBed narrowPeak optimal idr thresholded peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF311LEU 1066129 ENCODE Processing Pipeline 1331b0f0167063d44ef23d43fba755cd https://www.encodeproject.org/files/ENCFF531KWT/@@download/ENCFF531KWT.bigBed hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF524UVY bed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF108FPL, ENCFF574HZP, ENCFF969DYI 6249046 ENCODE Processing Pipeline be7e45a3892531cd835e47c75e9bd147 https://www.encodeproject.org/files/ENCFF524UVY/@@download/ENCFF524UVY.bed.gz hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF311LEU bed narrowPeak optimal idr thresholded peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF289JSG, ENCFF524UVY, ENCFF649MCA 533877 ENCODE Processing Pipeline ecc965b347f5de0a0f97d0a66178b5ab https://www.encodeproject.org/files/ENCFF311LEU/@@download/ENCFF311LEU.bed.gz hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF351HQV bigWig fold change over control ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF108FPL, ENCFF552ZAM, ENCFF574HZP, ENCFF969DYI 1121078735 ENCODE Processing Pipeline 5fbb618249bb32602fb15dcbbe0b0408 https://www.encodeproject.org/files/ENCFF351HQV/@@download/ENCFF351HQV.bigWig hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF993VMY bigBed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF524UVY 13489970 ENCODE Processing Pipeline 7b2fe8863632966629d16c15d83da4b3 https://www.encodeproject.org/files/ENCFF993VMY/@@download/ENCFF993VMY.bigBed hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF289JSG bed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF108FPL, ENCFF552ZAM, ENCFF574HZP, ENCFF969DYI 6940022 ENCODE Processing Pipeline 456d3964254c6cf747de31cd376823af https://www.encodeproject.org/files/ENCFF289JSG/@@download/ENCFF289JSG.bed.gz hg19 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF696BZK bam unfiltered alignments ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 50 ENCFF108ORY, ENCFF643CGH 1527697930 ENCODE Processing Pipeline 1af224f1c02278413db2fa03449a6f36 https://www.encodeproject.org/files/ENCFF696BZK/@@download/ENCFF696BZK.bam GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF379PVS bam unfiltered alignments ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF780YNX 1607987963 ENCODE Processing Pipeline 67ce41e88e59acb50389c1d8e6223fb3 https://www.encodeproject.org/files/ENCFF379PVS/@@download/ENCFF379PVS.bam GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF273SBT bam alignments ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 50 ENCFF108ORY, ENCFF643CGH 1090637105 ENCODE Processing Pipeline 1c8b6d10ef1a9e49eb50ce678c2da845 https://www.encodeproject.org/files/ENCFF273SBT/@@download/ENCFF273SBT.bam GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF140CDB bam alignments ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF780YNX 1203809176 ENCODE Processing Pipeline 386fa2f8e0c65c5a1e08c894f9a017dc https://www.encodeproject.org/files/ENCFF140CDB/@@download/ENCFF140CDB.bam GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF244BGM bigWig signal p-value ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF273SBT, ENCFF372RRO, ENCFF626VZO 954760660 ENCODE Processing Pipeline 41787d0f3737df365bed9bd2605de09b https://www.encodeproject.org/files/ENCFF244BGM/@@download/ENCFF244BGM.bigWig GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF225IZW bigWig signal p-value ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF140CDB, ENCFF372RRO, ENCFF626VZO 851965769 ENCODE Processing Pipeline 569cc70cc514de90fce7ad1d9946b04d https://www.encodeproject.org/files/ENCFF225IZW/@@download/ENCFF225IZW.bigWig GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF583EQS bigWig signal p-value ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF140CDB, ENCFF273SBT, ENCFF372RRO, ENCFF626VZO 989531239 ENCODE Processing Pipeline c564e21a48093d18cb6d720673c29e81 https://www.encodeproject.org/files/ENCFF583EQS/@@download/ENCFF583EQS.bigWig GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF424DBR bigWig fold change over control ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF273SBT, ENCFF372RRO, ENCFF626VZO 705438079 ENCODE Processing Pipeline ce1db3185eb46887a608a8fb674e4ec0 https://www.encodeproject.org/files/ENCFF424DBR/@@download/ENCFF424DBR.bigWig GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF666IWB bigWig fold change over control ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF140CDB, ENCFF372RRO, ENCFF626VZO 794334800 ENCODE Processing Pipeline 4945eb5e874de08bf764d159a64fab6a https://www.encodeproject.org/files/ENCFF666IWB/@@download/ENCFF666IWB.bigWig GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF441AMP bigWig fold change over control ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF140CDB, ENCFF273SBT, ENCFF372RRO, ENCFF626VZO 1113418993 ENCODE Processing Pipeline 0bf3ee0151780aed1754f1d57af8ba90 https://www.encodeproject.org/files/ENCFF441AMP/@@download/ENCFF441AMP.bigWig GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF945VBM bed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF140CDB, ENCFF372RRO, ENCFF626VZO 6350989 ENCODE Processing Pipeline be02082d60481e3d5e77d47518e3afc6 https://www.encodeproject.org/files/ENCFF945VBM/@@download/ENCFF945VBM.bed.gz GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF724NLJ bigBed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 2 ENCFF945VBM 13387272 ENCODE Processing Pipeline e2872897859ec441fcce9fe1b7620f4a https://www.encodeproject.org/files/ENCFF724NLJ/@@download/ENCFF724NLJ.bigBed GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF360YCA bed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF273SBT, ENCFF372RRO, ENCFF626VZO 6070815 ENCODE Processing Pipeline 46bca4c0db17faa89878bddbd18a8c9b https://www.encodeproject.org/files/ENCFF360YCA/@@download/ENCFF360YCA.bed.gz GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF809IIX bigBed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1 ENCFF360YCA 13492817 ENCODE Processing Pipeline 260b3eaf66f3e54fc314478e4e2ffbb9 https://www.encodeproject.org/files/ENCFF809IIX/@@download/ENCFF809IIX.bigBed GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF486CGH bigBed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF520HDU 13502272 ENCODE Processing Pipeline 3d1418bd8c13652956760b650c36a1e4 https://www.encodeproject.org/files/ENCFF486CGH/@@download/ENCFF486CGH.bigBed GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF520HDU bed narrowPeak peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF140CDB, ENCFF273SBT, ENCFF372RRO, ENCFF626VZO 6862751 ENCODE Processing Pipeline 5c15a489a47d4f79075633d8aac3a6ea https://www.encodeproject.org/files/ENCFF520HDU/@@download/ENCFF520HDU.bed.gz GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF441LKT bed narrowPeak conservative idr thresholded peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF360YCA, ENCFF419RSJ, ENCFF520HDU, ENCFF945VBM 514220 ENCODE Processing Pipeline 904b586b4eed9cac31383da5a7c4cf59 https://www.encodeproject.org/files/ENCFF441LKT/@@download/ENCFF441LKT.bed.gz GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF969EOM bigBed narrowPeak conservative idr thresholded peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF441LKT 1035677 ENCODE Processing Pipeline 18a973ac458842d233c1a556466a5789 https://www.encodeproject.org/files/ENCFF969EOM/@@download/ENCFF969EOM.bigBed GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF350CKI bed narrowPeak optimal idr thresholded peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF360YCA, ENCFF419RSJ, ENCFF520HDU, ENCFF945VBM 553706 ENCODE Processing Pipeline b313a15edc85a9fbd3b6b6ae11e4db1f https://www.encodeproject.org/files/ENCFF350CKI/@@download/ENCFF350CKI.bed.gz GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF356OQP bigBed narrowPeak optimal idr thresholded peaks ENCSR518WPL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-13 ENCODE 1, 2 ENCFF350CKI 1097527 ENCODE Processing Pipeline 08b727b2642da5969ca9c447694b6398 https://www.encodeproject.org/files/ENCFF356OQP/@@download/ENCFF356OQP.bigBed GRCh38 released antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF468UEL fastq reads ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1394707718 Richard Myers, HAIB b98e0957aa5d8632ec98f8158fa98d29 SRA:SRR5339409 https://www.encodeproject.org/files/ENCFF468UEL/@@download/ENCFF468UEL.fastq.gz HiSeq 2000 /files/ENCFF434XRU/ released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF045UOH fastq reads ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1115105921 Richard Myers, HAIB bc0ab97f2f57bfa0d1c53c27f5ed197e SRA:SRR5339410 https://www.encodeproject.org/files/ENCFF045UOH/@@download/ENCFF045UOH.fastq.gz HiSeq 2000 /files/ENCFF272WBE/ released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF674SQJ bam alignments ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF468UEL, ENCFF807MUK 649226320 ENCODE Processing Pipeline 123df4d7e0558e7f2d9824942f2f1502 https://www.encodeproject.org/files/ENCFF674SQJ/@@download/ENCFF674SQJ.bam hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF213IBE bam alignments ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF045UOH, ENCFF807MUK 538128588 ENCODE Processing Pipeline 036ac58c74ee9f547f227cccbd542ac0 https://www.encodeproject.org/files/ENCFF213IBE/@@download/ENCFF213IBE.bam hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF126URE bigWig signal p-value ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF108FPL, ENCFF213IBE, ENCFF850ZDJ 649818158 ENCODE Processing Pipeline 8f1c9773011e237f79ee87acbc7af321 https://www.encodeproject.org/files/ENCFF126URE/@@download/ENCFF126URE.bigWig hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF911GYT bigWig signal p-value ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF108FPL, ENCFF213IBE, ENCFF674SQJ, ENCFF850ZDJ 712582909 ENCODE Processing Pipeline e9e63653586e7daf5a0af9fda65934f4 https://www.encodeproject.org/files/ENCFF911GYT/@@download/ENCFF911GYT.bigWig hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF583CBK bigWig signal p-value ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF108FPL, ENCFF674SQJ, ENCFF850ZDJ 738745147 ENCODE Processing Pipeline c827d38eb763809f2e94e0fbde242fbc https://www.encodeproject.org/files/ENCFF583CBK/@@download/ENCFF583CBK.bigWig hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF696LNC bigWig fold change over control ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF108FPL, ENCFF213IBE, ENCFF850ZDJ 391867381 ENCODE Processing Pipeline f90627e4650a4beb72048c0b9b69b3c1 https://www.encodeproject.org/files/ENCFF696LNC/@@download/ENCFF696LNC.bigWig hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF636FTJ bigWig fold change over control ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF108FPL, ENCFF674SQJ, ENCFF850ZDJ 579982963 ENCODE Processing Pipeline 072d6ad064a62463f318fd52f551d2a7 https://www.encodeproject.org/files/ENCFF636FTJ/@@download/ENCFF636FTJ.bigWig hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF168SMR bigWig fold change over control ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF108FPL, ENCFF213IBE, ENCFF674SQJ, ENCFF850ZDJ 777977058 ENCODE Processing Pipeline 432b37aafb572794f68a5fc67a0f03f5 https://www.encodeproject.org/files/ENCFF168SMR/@@download/ENCFF168SMR.bigWig hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF436LYU bed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF108FPL, ENCFF213IBE, ENCFF850ZDJ 5709650 ENCODE Processing Pipeline 6b343ead7d115e6b752ee6c132f97a7f https://www.encodeproject.org/files/ENCFF436LYU/@@download/ENCFF436LYU.bed.gz hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF533OLJ bed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF108FPL, ENCFF674SQJ, ENCFF850ZDJ 6215046 ENCODE Processing Pipeline 68dc3be13a3520b559f5ef82686f09cd https://www.encodeproject.org/files/ENCFF533OLJ/@@download/ENCFF533OLJ.bed.gz hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF062EYR bigBed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF436LYU 13302123 ENCODE Processing Pipeline ac07c57e48ccb3deb2557d41f75d7001 https://www.encodeproject.org/files/ENCFF062EYR/@@download/ENCFF062EYR.bigBed hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF328VME bigBed narrowPeak conservative idr thresholded peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF920ITW 480070 ENCODE Processing Pipeline f963b424d4c54cc0e15b1069737d1375 https://www.encodeproject.org/files/ENCFF328VME/@@download/ENCFF328VME.bigBed hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF003GNY bed narrowPeak optimal idr thresholded peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF436LYU, ENCFF518DDL, ENCFF533OLJ 280925 ENCODE Processing Pipeline c43e409d329170937ef998c5d5e77be0 https://www.encodeproject.org/files/ENCFF003GNY/@@download/ENCFF003GNY.bed.gz hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF999BAC bigBed narrowPeak optimal idr thresholded peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF003GNY 520461 ENCODE Processing Pipeline 3018b3d7d4e6cd9bd5b5b7b1c7b61c3a https://www.encodeproject.org/files/ENCFF999BAC/@@download/ENCFF999BAC.bigBed hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF920ITW bed narrowPeak conservative idr thresholded peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF436LYU, ENCFF518DDL, ENCFF533OLJ 253190 ENCODE Processing Pipeline 59925803583637c7f4a1a2696f1d99d4 https://www.encodeproject.org/files/ENCFF920ITW/@@download/ENCFF920ITW.bed.gz hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF518DDL bed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF108FPL, ENCFF213IBE, ENCFF674SQJ, ENCFF850ZDJ 6541063 ENCODE Processing Pipeline a8c2d05179a659f50c6e8e735e491216 https://www.encodeproject.org/files/ENCFF518DDL/@@download/ENCFF518DDL.bed.gz hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF836CKV bigBed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF518DDL 13438336 ENCODE Processing Pipeline 5ed85e2af91a0d683ab9e1eef61da61d https://www.encodeproject.org/files/ENCFF836CKV/@@download/ENCFF836CKV.bigBed hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF655LXK bigBed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF533OLJ 13395517 ENCODE Processing Pipeline adb8e438adce819c4e09a6c181404cbb https://www.encodeproject.org/files/ENCFF655LXK/@@download/ENCFF655LXK.bigBed hg19 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF390ZCZ bam unfiltered alignments ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 50 ENCFF468UEL, ENCFF643CGH 1272463486 ENCODE Processing Pipeline e7c9b1d0b2918ecda5d55e40ae4a3e12 https://www.encodeproject.org/files/ENCFF390ZCZ/@@download/ENCFF390ZCZ.bam GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF131CXQ bam unfiltered alignments ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 50 ENCFF045UOH, ENCFF643CGH 1035185785 ENCODE Processing Pipeline 1db41953f83b96b044bc3aa7495a2481 https://www.encodeproject.org/files/ENCFF131CXQ/@@download/ENCFF131CXQ.bam GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF688NWX bam alignments ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 50 ENCFF045UOH, ENCFF643CGH 537930120 ENCODE Processing Pipeline 13ab622384a140201e43f51e6e292b50 https://www.encodeproject.org/files/ENCFF688NWX/@@download/ENCFF688NWX.bam GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF332KBI bam alignments ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 50 ENCFF468UEL, ENCFF643CGH 649009623 ENCODE Processing Pipeline 70c766fbaad3d0bb653300a673b7e2d3 https://www.encodeproject.org/files/ENCFF332KBI/@@download/ENCFF332KBI.bam GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF387INZ bigWig signal p-value ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF035HOG, ENCFF626VZO, ENCFF688NWX 714520850 ENCODE Processing Pipeline 0d1bce2355cb1a5418fecea4c341c3e4 https://www.encodeproject.org/files/ENCFF387INZ/@@download/ENCFF387INZ.bigWig GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF295FJW bigWig signal p-value ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF035HOG, ENCFF332KBI, ENCFF626VZO 720122733 ENCODE Processing Pipeline 0d8df6230b7ab6bc057cf55ad3c35826 https://www.encodeproject.org/files/ENCFF295FJW/@@download/ENCFF295FJW.bigWig GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF501JJR bigWig fold change over control ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF035HOG, ENCFF626VZO, ENCFF688NWX 382726704 ENCODE Processing Pipeline fc71f71830a44b849bf037cb9f7f9ad4 https://www.encodeproject.org/files/ENCFF501JJR/@@download/ENCFF501JJR.bigWig GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF686OMQ bigWig signal p-value ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF035HOG, ENCFF332KBI, ENCFF626VZO, ENCFF688NWX 777697775 ENCODE Processing Pipeline ff4d64346dc575975d9dd19f78562c32 https://www.encodeproject.org/files/ENCFF686OMQ/@@download/ENCFF686OMQ.bigWig GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF382WBN bigWig fold change over control ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF035HOG, ENCFF332KBI, ENCFF626VZO, ENCFF688NWX 776981660 ENCODE Processing Pipeline 71cc8ace24b709f744c7f32ce15a91e9 https://www.encodeproject.org/files/ENCFF382WBN/@@download/ENCFF382WBN.bigWig GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF570RVS bigWig fold change over control ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF035HOG, ENCFF332KBI, ENCFF626VZO 576992104 ENCODE Processing Pipeline 41fe5ca3a4ff80f985eaa42d8007aa2a https://www.encodeproject.org/files/ENCFF570RVS/@@download/ENCFF570RVS.bigWig GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF665ZMZ bed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF035HOG, ENCFF626VZO, ENCFF688NWX 5508431 ENCODE Processing Pipeline 3c355f4aaf6175ed9f003d130a1e5d20 https://www.encodeproject.org/files/ENCFF665ZMZ/@@download/ENCFF665ZMZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF833JKW bed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF035HOG, ENCFF332KBI, ENCFF626VZO 6000066 ENCODE Processing Pipeline 56101f48ecc8105b53f0362176b94c93 https://www.encodeproject.org/files/ENCFF833JKW/@@download/ENCFF833JKW.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF930MLB bigBed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1 ENCFF665ZMZ 13234981 ENCODE Processing Pipeline c029b4f4f16390a11499a6e4163f91c8 https://www.encodeproject.org/files/ENCFF930MLB/@@download/ENCFF930MLB.bigBed GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF531ASI bed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF035HOG, ENCFF332KBI, ENCFF626VZO, ENCFF688NWX 6369740 ENCODE Processing Pipeline e96f6b6a6352a435ddbd6e3721998111 https://www.encodeproject.org/files/ENCFF531ASI/@@download/ENCFF531ASI.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF842MAP bigBed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 2 ENCFF833JKW 13364845 ENCODE Processing Pipeline 1f95a4430df82c1948f65ee292672f21 https://www.encodeproject.org/files/ENCFF842MAP/@@download/ENCFF842MAP.bigBed GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF536CTX bed narrowPeak conservative idr thresholded peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF531ASI, ENCFF665ZMZ, ENCFF833JKW 260809 ENCODE Processing Pipeline 06707cba16ae5fdbd0b28d177f3e3f2b https://www.encodeproject.org/files/ENCFF536CTX/@@download/ENCFF536CTX.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF418HPM bigBed narrowPeak peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF531ASI 13467290 ENCODE Processing Pipeline 88ed03aa222a5a302d93440a299a0d49 https://www.encodeproject.org/files/ENCFF418HPM/@@download/ENCFF418HPM.bigBed GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF313RFR bed narrowPeak optimal idr thresholded peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF531ASI, ENCFF665ZMZ, ENCFF833JKW 294539 ENCODE Processing Pipeline a850261710eb5c1d26bf933271e7be75 https://www.encodeproject.org/files/ENCFF313RFR/@@download/ENCFF313RFR.bed.gz GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF095QFS bigBed narrowPeak conservative idr thresholded peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF536CTX 623629 ENCODE Processing Pipeline cfaed51d61e56a5b892a8d2aa07f256e https://www.encodeproject.org/files/ENCFF095QFS/@@download/ENCFF095QFS.bigBed GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF863FRP bigBed narrowPeak optimal idr thresholded peaks ENCSR853ADA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-13 ENCODE 1, 2 ENCFF313RFR 688100 ENCODE Processing Pipeline e51f2eb1b982776df60d7022c1dccb74 https://www.encodeproject.org/files/ENCFF863FRP/@@download/ENCFF863FRP.bigBed GRCh38 released mild to moderate bottlenecking, low read depth, moderate library complexity missing mapped reads lengths, missing unfiltered alignments ENCFF992GOW fastq reads ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF581BMZ 2455543862 Richard Myers, HAIB b48160bfff62806a796015865ec09f17 https://www.encodeproject.org/files/ENCFF992GOW/@@download/ENCFF992GOW.fastq.gz HiSeq 2000 /files/ENCFF299YUY/ released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF581BMZ fastq reads ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF992GOW 2597552315 Richard Myers, HAIB 79dd3113a11c098afcb7862ca785d04b https://www.encodeproject.org/files/ENCFF581BMZ/@@download/ENCFF581BMZ.fastq.gz HiSeq 2000 /files/ENCFF452ZZF/ released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF534SHC bam unfiltered alignments ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF581BMZ, ENCFF807MUK, ENCFF992GOW 3688300712 ENCODE Processing Pipeline b1519eafbfc127d5d42e6b2f36009a3e https://www.encodeproject.org/files/ENCFF534SHC/@@download/ENCFF534SHC.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF328BAK bam alignments ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF581BMZ, ENCFF807MUK, ENCFF992GOW 2519691176 ENCODE Processing Pipeline 3210f8d47ba69ce4d07f2d453b18946b https://www.encodeproject.org/files/ENCFF328BAK/@@download/ENCFF328BAK.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF487PDL bam unfiltered alignments ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF581BMZ, ENCFF643CGH, ENCFF992GOW 3681168202 ENCODE Processing Pipeline e58838d773f1e868c406515bc4b597b2 https://www.encodeproject.org/files/ENCFF487PDL/@@download/ENCFF487PDL.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF675VGN bam alignments ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF581BMZ, ENCFF643CGH, ENCFF992GOW 2521761814 ENCODE Processing Pipeline 0e9a3a7d3315586f574b40d4aa6eadde https://www.encodeproject.org/files/ENCFF675VGN/@@download/ENCFF675VGN.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF158WLD bigWig signal p-value ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF675VGN, ENCFF700NLK 1482791709 ENCODE Processing Pipeline d21763a480921937b5ee8e26e50f1eba https://www.encodeproject.org/files/ENCFF158WLD/@@download/ENCFF158WLD.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF738RTR bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF900JGZ 1312567 ENCODE Processing Pipeline bba1a5aa67524e402744ecce855d7abf https://www.encodeproject.org/files/ENCFF738RTR/@@download/ENCFF738RTR.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF365XYE bigBed narrowPeak peaks ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF900JGZ 13258372 ENCODE Processing Pipeline ebc4cfc7b93ca54835f9f7259a48350c https://www.encodeproject.org/files/ENCFF365XYE/@@download/ENCFF365XYE.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF957FIH bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF738RTR 2323031 ENCODE Processing Pipeline 0178368192344f941200810f38ebf1f7 https://www.encodeproject.org/files/ENCFF957FIH/@@download/ENCFF957FIH.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF108IFR bigWig fold change over control ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF675VGN, ENCFF700NLK 1081708500 ENCODE Processing Pipeline 653062bc4ee73c4317bc488539498799 https://www.encodeproject.org/files/ENCFF108IFR/@@download/ENCFF108IFR.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF900JGZ bed narrowPeak peaks ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF675VGN, ENCFF700NLK 6745397 ENCODE Processing Pipeline 54e0de249cb8ffce218a01939fcc1990 https://www.encodeproject.org/files/ENCFF900JGZ/@@download/ENCFF900JGZ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF645PDZ bigWig fold change over control ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF328BAK, ENCFF496DGC 1083062803 ENCODE Processing Pipeline d079475283f1b0e2f4e02196f7b6753e https://www.encodeproject.org/files/ENCFF645PDZ/@@download/ENCFF645PDZ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF013MJH bigBed narrowPeak peaks ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF875HGQ 12514431 ENCODE Processing Pipeline 83b18372fabdc8e40ca1fe727286c3a0 https://www.encodeproject.org/files/ENCFF013MJH/@@download/ENCFF013MJH.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF598AIY bigWig signal p-value ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF328BAK, ENCFF496DGC 1479536316 ENCODE Processing Pipeline 120ea819c6528344f9e8e36e8bbe46b9 https://www.encodeproject.org/files/ENCFF598AIY/@@download/ENCFF598AIY.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF230JOX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF594WWB 2286081 ENCODE Processing Pipeline a67d5bfdf8fabab10abeec9c5be1ee16 https://www.encodeproject.org/files/ENCFF230JOX/@@download/ENCFF230JOX.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF875HGQ bed narrowPeak peaks ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF328BAK, ENCFF496DGC 6194400 ENCODE Processing Pipeline 520bbfdcbe200f38899af61c199f8564 https://www.encodeproject.org/files/ENCFF875HGQ/@@download/ENCFF875HGQ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF594WWB bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR645JVW ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF875HGQ 1288543 ENCODE Processing Pipeline c1d0e3bcf35d3cd3b42b4f52467fec17 https://www.encodeproject.org/files/ENCFF594WWB/@@download/ENCFF594WWB.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking experiment not submitted to GEO ENCFF000NSY bam alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NTN 1232438998 Richard Myers, HAIB 0fd1b112d0169fc1c4033ded5277c6c8 https://www.encodeproject.org/files/ENCFF000NSY/@@download/ENCFF000NSY.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000NSZ bigBed broadPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TWJ 596956 Richard Myers, HAIB 5672e81e76202f615d56c1f126e7378e https://www.encodeproject.org/files/ENCFF000NSZ/@@download/ENCFF000NSZ.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000NTA bam alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NTL 802177400 Richard Myers, HAIB 7711544e4be8a3eae17fa20e9b9ea37f https://www.encodeproject.org/files/ENCFF000NTA/@@download/ENCFF000NTA.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000NTB bigBed broadPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TWK 221782 Richard Myers, HAIB 0058e56162ef151a6116feba65e60998 https://www.encodeproject.org/files/ENCFF000NTB/@@download/ENCFF000NTB.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000NTC bigWig raw signal ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 1 38539521 Richard Myers, HAIB 75078b9d68ce211465647211a50584e9 https://www.encodeproject.org/files/ENCFF000NTC/@@download/ENCFF000NTC.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000NTE bigWig raw signal ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 1 16910964 Richard Myers, HAIB 3ed63f9d4f0a1b3ef64c8488566725f8 https://www.encodeproject.org/files/ENCFF000NTE/@@download/ENCFF000NTE.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000NTL fastq reads ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 914397894 Richard Myers, HAIB 93bcf708bdd4a287e1b23bedf97bc2a9 https://www.encodeproject.org/files/ENCFF000NTL/@@download/ENCFF000NTL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000NTN fastq reads ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1175212931 Richard Myers, HAIB 496c34442931c5cb22f6c94fb3ade59a https://www.encodeproject.org/files/ENCFF000NTN/@@download/ENCFF000NTN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001TWJ bed broadPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 1 356710 Richard Myers, HAIB d44e7109ff806385dcf5fe652f154f88 https://www.encodeproject.org/files/ENCFF001TWJ/@@download/ENCFF001TWJ.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001TWK bed broadPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 1 116920 Richard Myers, HAIB ce8c00771b95f138b4c803e6f15914ef https://www.encodeproject.org/files/ENCFF001TWK/@@download/ENCFF001TWK.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF002CGS bed narrowPeak optimal idr thresholded peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 300102 ENCODE Consortium Analysis Working Group 1fa40f4212396dbecc511b3a3a361c40 https://www.encodeproject.org/files/ENCFF002CGS/@@download/ENCFF002CGS.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF651IOE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE ENCFF002CGS 680572 ENCODE Consortium 6fcc6143017983f97b794d637c5f2cab https://www.encodeproject.org/files/ENCFF651IOE/@@download/ENCFF651IOE.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF563KYU bam unfiltered alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTL, ENCFF643CGH 988569892 ENCODE Processing Pipeline f13a3dbe74afb41561bfbbeb48b4b05f https://www.encodeproject.org/files/ENCFF563KYU/@@download/ENCFF563KYU.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF488UTP bam alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTL, ENCFF643CGH 294183826 ENCODE Processing Pipeline 956fbb715ae034e32517219907b21b33 https://www.encodeproject.org/files/ENCFF488UTP/@@download/ENCFF488UTP.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF227WBP bam alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTN, ENCFF643CGH 568731531 ENCODE Processing Pipeline e20f34788a79aa28efaa021ee8846b26 https://www.encodeproject.org/files/ENCFF227WBP/@@download/ENCFF227WBP.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF408CVD bam unfiltered alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTN, ENCFF643CGH 1440943972 ENCODE Processing Pipeline 9d3461f5b70c2ecb60802cc2ced90025 https://www.encodeproject.org/files/ENCFF408CVD/@@download/ENCFF408CVD.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF511GDC bam unfiltered alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTL, ENCFF807MUK 1010475457 ENCODE Processing Pipeline 3a6c2c332aa4658fb731fdda23d168af https://www.encodeproject.org/files/ENCFF511GDC/@@download/ENCFF511GDC.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF288XGA bam alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTL, ENCFF807MUK 288418113 ENCODE Processing Pipeline de5cff384c79044d71cf40d3569e9cac https://www.encodeproject.org/files/ENCFF288XGA/@@download/ENCFF288XGA.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF462BJG bam unfiltered alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTN, ENCFF807MUK 1444156283 ENCODE Processing Pipeline ffa182711f76e3449557e6846c442436 https://www.encodeproject.org/files/ENCFF462BJG/@@download/ENCFF462BJG.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF032GHF bam alignments ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTN, ENCFF807MUK 562707311 ENCODE Processing Pipeline 7eab4857a7a7dfa7117daed7623e4339 https://www.encodeproject.org/files/ENCFF032GHF/@@download/ENCFF032GHF.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF016DLE bigWig signal p-value ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF488UTP, ENCFF488YYE 392189845 ENCODE Processing Pipeline de4f1bd06a3d366717f6035812aafa2c https://www.encodeproject.org/files/ENCFF016DLE/@@download/ENCFF016DLE.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF503JPY bigWig signal p-value ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF227WBP, ENCFF488YYE 359365390 ENCODE Processing Pipeline 10fbef5811b1811a9b59e291d5b1658c https://www.encodeproject.org/files/ENCFF503JPY/@@download/ENCFF503JPY.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF935GIB bigWig signal p-value ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF227WBP, ENCFF488UTP, ENCFF488YYE 473249907 ENCODE Processing Pipeline 5f202e70cd1c157c688525cf0cde80a6 https://www.encodeproject.org/files/ENCFF935GIB/@@download/ENCFF935GIB.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF244BKM bigWig fold change over control ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF488UTP, ENCFF488YYE 170212421 ENCODE Processing Pipeline d6366840196097d5e24544d29cb7e7ca https://www.encodeproject.org/files/ENCFF244BKM/@@download/ENCFF244BKM.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF098GAJ bigWig fold change over control ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF227WBP, ENCFF488YYE 297207866 ENCODE Processing Pipeline be0ed51957af99409454c1e85ea73fc7 https://www.encodeproject.org/files/ENCFF098GAJ/@@download/ENCFF098GAJ.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF641QFU bigWig fold change over control ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF227WBP, ENCFF488UTP, ENCFF488YYE 411510434 ENCODE Processing Pipeline cd0066ef6a8ebd232e239d26bcad7e2d https://www.encodeproject.org/files/ENCFF641QFU/@@download/ENCFF641QFU.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF972GFU bed narrowPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF488UTP, ENCFF488YYE 2951079 ENCODE Processing Pipeline f1561b6c77dfada4d32e5ff63bd8fd47 https://www.encodeproject.org/files/ENCFF972GFU/@@download/ENCFF972GFU.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF496OFD bed narrowPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF227WBP, ENCFF488YYE 5198625 ENCODE Processing Pipeline 358c2de132d16c4751cdffefe7d1d3ff https://www.encodeproject.org/files/ENCFF496OFD/@@download/ENCFF496OFD.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF414UGE bigBed narrowPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF496OFD 10804944 ENCODE Processing Pipeline cc7b919196e246d3559cf6e537bcb8d2 https://www.encodeproject.org/files/ENCFF414UGE/@@download/ENCFF414UGE.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF500PRU bigBed narrowPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF972GFU 6916046 ENCODE Processing Pipeline e1609176e372f9492331713edafb491d https://www.encodeproject.org/files/ENCFF500PRU/@@download/ENCFF500PRU.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF202MSE bigBed narrowPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF829IXH 13207639 ENCODE Processing Pipeline 6d0796c4638d22ef24e9f3777704fd02 https://www.encodeproject.org/files/ENCFF202MSE/@@download/ENCFF202MSE.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF829IXH bed narrowPeak peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF227WBP, ENCFF488UTP, ENCFF488YYE 5649000 ENCODE Processing Pipeline 0f8e51cd2a040ec8a7bb888c8035f7ec https://www.encodeproject.org/files/ENCFF829IXH/@@download/ENCFF829IXH.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF516SWI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF372AVL 423790 ENCODE Processing Pipeline 899b1187bb009d1425fad9bc3d5ce877 https://www.encodeproject.org/files/ENCFF516SWI/@@download/ENCFF516SWI.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF247MHT bed narrowPeak optimal idr thresholded peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF496OFD, ENCFF829IXH, ENCFF972GFU 354886 ENCODE Processing Pipeline f9d7460a309b718a585ea184b29a774d https://www.encodeproject.org/files/ENCFF247MHT/@@download/ENCFF247MHT.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF372AVL bed narrowPeak conservative idr thresholded peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF496OFD, ENCFF829IXH, ENCFF972GFU 213774 ENCODE Processing Pipeline b14947d6d493821cb64ab777a73478ae https://www.encodeproject.org/files/ENCFF372AVL/@@download/ENCFF372AVL.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF845RCE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNQ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL3-human ENCAB000AEG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF247MHT 750433 ENCODE Processing Pipeline ba36f1e9b093b02dcbe46249db2a522f https://www.encodeproject.org/files/ENCFF845RCE/@@download/ENCFF845RCE.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF211PIU fastq reads ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF439FBD 1516001356 Richard Myers, HAIB dce4ad6b06cd63cd61c1caff0dfb09ed https://www.encodeproject.org/files/ENCFF211PIU/@@download/ENCFF211PIU.fastq.gz HiSeq 2000 /files/ENCFF031GRR/ released antibody characterized with exemption experiment not submitted to GEO ENCFF439FBD fastq reads ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF211PIU 1547525745 Richard Myers, HAIB 6a3cab38f515f8957620ffc4bf7d5960 https://www.encodeproject.org/files/ENCFF439FBD/@@download/ENCFF439FBD.fastq.gz HiSeq 2000 /files/ENCFF132BCH/ released antibody characterized with exemption experiment not submitted to GEO ENCFF638LRF bam unfiltered alignments ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF211PIU, ENCFF439FBD, ENCFF643CGH 3527075468 ENCODE Processing Pipeline a357278c29aa246ad428f05c05b0be44 https://www.encodeproject.org/files/ENCFF638LRF/@@download/ENCFF638LRF.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF810UHD bam unfiltered alignments ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF211PIU, ENCFF439FBD, ENCFF807MUK 3517604864 ENCODE Processing Pipeline 57ca17fd19c26a3a9f514dfa326ebbe9 https://www.encodeproject.org/files/ENCFF810UHD/@@download/ENCFF810UHD.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF480AYM bam alignments ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF211PIU, ENCFF439FBD, ENCFF643CGH 2729072129 ENCODE Processing Pipeline 508aa8d6adbae6064453a0629a53f02e https://www.encodeproject.org/files/ENCFF480AYM/@@download/ENCFF480AYM.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF391IJU bam alignments ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF211PIU, ENCFF439FBD, ENCFF807MUK 2727751213 ENCODE Processing Pipeline df804198917457fdcb50ab29f2ad6da9 https://www.encodeproject.org/files/ENCFF391IJU/@@download/ENCFF391IJU.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF899HRH bigWig signal p-value ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF389ZAK, ENCFF480AYM 972436166 ENCODE Processing Pipeline 991206a1c57fbaf6a5cb997d1520483c https://www.encodeproject.org/files/ENCFF899HRH/@@download/ENCFF899HRH.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF908BNY bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF498QYW 1221735 ENCODE Processing Pipeline a5894f0a98623e86d69d9ccd28d65a07 https://www.encodeproject.org/files/ENCFF908BNY/@@download/ENCFF908BNY.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF498QYW bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF405VWN, ENCFF419RSJ 636543 ENCODE Processing Pipeline 30879bdff7d184cb12f984b1c187489a https://www.encodeproject.org/files/ENCFF498QYW/@@download/ENCFF498QYW.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF405VWN bed narrowPeak peaks ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF389ZAK, ENCFF480AYM 6744639 ENCODE Processing Pipeline c4eddea1f6d9cd134ef6c50989f06c30 https://www.encodeproject.org/files/ENCFF405VWN/@@download/ENCFF405VWN.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF164DOR bigBed narrowPeak peaks ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF405VWN 13351015 ENCODE Processing Pipeline 16e49009b78d2bd5c433d73b8651f5b1 https://www.encodeproject.org/files/ENCFF164DOR/@@download/ENCFF164DOR.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF168MBT bigWig fold change over control ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF389ZAK, ENCFF480AYM 897042937 ENCODE Processing Pipeline daf1ba881be9ba5aa01608ebbafc2975 https://www.encodeproject.org/files/ENCFF168MBT/@@download/ENCFF168MBT.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF848JVN bigWig fold change over control ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF391IJU, ENCFF578NQW 905165839 ENCODE Processing Pipeline e3837a40ed39766ae4cfc22ebb18f722 https://www.encodeproject.org/files/ENCFF848JVN/@@download/ENCFF848JVN.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF246QWX bigWig signal p-value ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF391IJU, ENCFF578NQW 977938329 ENCODE Processing Pipeline f3f1f06d186a534e8af733e8bd7cd1af https://www.encodeproject.org/files/ENCFF246QWX/@@download/ENCFF246QWX.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF301YSN bigBed narrowPeak peaks ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF507DHS 13395938 ENCODE Processing Pipeline 9c0430fdcefa653066e3f6159cedcbfb https://www.encodeproject.org/files/ENCFF301YSN/@@download/ENCFF301YSN.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF754JIP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF507DHS 658842 ENCODE Processing Pipeline 6f6f8b8155259d2f5064cbab7b4c8ad6 https://www.encodeproject.org/files/ENCFF754JIP/@@download/ENCFF754JIP.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF192DEL bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF754JIP 1247025 ENCODE Processing Pipeline 875c7cfb5262391fe7ad10a79d8df8b4 https://www.encodeproject.org/files/ENCFF192DEL/@@download/ENCFF192DEL.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF507DHS bed narrowPeak peaks ENCSR986QAR ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF391IJU, ENCFF578NQW 6794648 ENCODE Processing Pipeline 38db9bbbc16293889d2c09faad4f18f2 https://www.encodeproject.org/files/ENCFF507DHS/@@download/ENCFF507DHS.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF554ZQU fastq reads ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF762GTE 3664938455 Richard Myers, HAIB b2cb4a1caaef04f5cac88053a4cf45dc SRA:SRR6212611 https://www.encodeproject.org/files/ENCFF554ZQU/@@download/ENCFF554ZQU.fastq.gz HiSeq 2000 /files/ENCFF485SFR/ released antibody characterized with exemption ENCFF762GTE fastq reads ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF554ZQU 3732281413 Richard Myers, HAIB 263c78688e0a439625c9527bb741f48d SRA:SRR6212611 https://www.encodeproject.org/files/ENCFF762GTE/@@download/ENCFF762GTE.fastq.gz HiSeq 2000 /files/ENCFF005FTS/ released antibody characterized with exemption ENCFF517ALU bam unfiltered alignments ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF554ZQU, ENCFF762GTE, ENCFF807MUK 8571358508 ENCODE Processing Pipeline c9b2b46042822930ed63b8da6a52ea0d https://www.encodeproject.org/files/ENCFF517ALU/@@download/ENCFF517ALU.bam hg19 released antibody characterized with exemption ENCFF150JKN bam alignments ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF554ZQU, ENCFF762GTE, ENCFF807MUK 6365634838 ENCODE Processing Pipeline cbabadb39bde74afb75a3122f0a7188c https://www.encodeproject.org/files/ENCFF150JKN/@@download/ENCFF150JKN.bam hg19 released antibody characterized with exemption ENCFF222RIN bam unfiltered alignments ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF554ZQU, ENCFF643CGH, ENCFF762GTE 8606142626 ENCODE Processing Pipeline 28f5424545eaa23cc17b3d908407ef6c https://www.encodeproject.org/files/ENCFF222RIN/@@download/ENCFF222RIN.bam GRCh38 released antibody characterized with exemption ENCFF236PLN bam alignments ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF554ZQU, ENCFF643CGH, ENCFF762GTE 6372370294 ENCODE Processing Pipeline d80602e1fa5bcad59056adc6c24b7efd https://www.encodeproject.org/files/ENCFF236PLN/@@download/ENCFF236PLN.bam GRCh38 released antibody characterized with exemption ENCFF786ZRF bigWig signal p-value ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF236PLN 1320773451 ENCODE Processing Pipeline 041bfb18f32f26151ed54e0ad64d0a62 https://www.encodeproject.org/files/ENCFF786ZRF/@@download/ENCFF786ZRF.bigWig GRCh38 released antibody characterized with exemption ENCFF439FLW bigWig fold change over control ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF236PLN 1761240776 ENCODE Processing Pipeline 3079d64b1494648dde60cb2537d6a85c https://www.encodeproject.org/files/ENCFF439FLW/@@download/ENCFF439FLW.bigWig GRCh38 released antibody characterized with exemption ENCFF096HAF bed narrowPeak peaks ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF236PLN 5982402 ENCODE Processing Pipeline a0efac6f7827661aec7b2f8feb053793 https://www.encodeproject.org/files/ENCFF096HAF/@@download/ENCFF096HAF.bed.gz GRCh38 released antibody characterized with exemption ENCFF325GMW bigBed narrowPeak peaks ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF096HAF 11916821 ENCODE Processing Pipeline b9bd419e43714fad2f68a31bec2dc45a https://www.encodeproject.org/files/ENCFF325GMW/@@download/ENCFF325GMW.bigBed GRCh38 released antibody characterized with exemption ENCFF481USU bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF096HAF, ENCFF419RSJ 34672 ENCODE Processing Pipeline 50478453a1b0a9d30f58b8a58da62049 https://www.encodeproject.org/files/ENCFF481USU/@@download/ENCFF481USU.bed.gz GRCh38 released antibody characterized with exemption ENCFF646OAF bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF481USU 123096 ENCODE Processing Pipeline d5a709c2150d555e8cf6bd325a6ec101 https://www.encodeproject.org/files/ENCFF646OAF/@@download/ENCFF646OAF.bigBed GRCh38 released antibody characterized with exemption ENCFF015VSN bigWig signal p-value ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF150JKN 1333800156 ENCODE Processing Pipeline 4ea707c6709e741926cfe3f0b4e7f2fb https://www.encodeproject.org/files/ENCFF015VSN/@@download/ENCFF015VSN.bigWig hg19 released antibody characterized with exemption ENCFF571CAU bed narrowPeak peaks ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF150JKN 5928073 ENCODE Processing Pipeline f43861ef67f10c5c21e74e201183cecb https://www.encodeproject.org/files/ENCFF571CAU/@@download/ENCFF571CAU.bed.gz hg19 released antibody characterized with exemption ENCFF928UPT bigWig fold change over control ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF150JKN 1775494297 ENCODE Processing Pipeline 41b2d1d151486b3396646c9efad18b56 https://www.encodeproject.org/files/ENCFF928UPT/@@download/ENCFF928UPT.bigWig hg19 released antibody characterized with exemption ENCFF871ZOY bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF047QFE 118097 ENCODE Processing Pipeline 8eceb8eb26040580d23be4e8455e2b35 https://www.encodeproject.org/files/ENCFF871ZOY/@@download/ENCFF871ZOY.bigBed hg19 released antibody characterized with exemption ENCFF536DNA bigBed narrowPeak peaks ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF571CAU 11913653 ENCODE Processing Pipeline 85f4f648015aecc0f1100fb1b3bf26cc https://www.encodeproject.org/files/ENCFF536DNA/@@download/ENCFF536DNA.bigBed hg19 released antibody characterized with exemption ENCFF047QFE bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR088VUG ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF571CAU 32863 ENCODE Processing Pipeline 76490b8e8a67bc6345cc1bd7d4803f9b https://www.encodeproject.org/files/ENCFF047QFE/@@download/ENCFF047QFE.bed.gz hg19 released antibody characterized with exemption ENCFF002BFS fastq reads ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1214732073 Richard Myers, HAIB d89727d25925869bfb4043a4ecfaf86a SRA:SRR5338634 https://www.encodeproject.org/files/ENCFF002BFS/@@download/ENCFF002BFS.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released low read depth missing unfiltered alignments ENCFF002BFT fastq reads ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1637372619 Richard Myers, HAIB 87a727b35f052791014f38a1566f93ce SRA:SRR5338633 https://www.encodeproject.org/files/ENCFF002BFT/@@download/ENCFF002BFT.fastq.gz HiSeq 2000 /files/ENCFF002BGB/ released low read depth missing unfiltered alignments ENCFF033ACD bam alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFS, ENCFF807MUK 984850358 ENCODE Processing Pipeline 2977cd6a0c109c39d39d6633e3c24955 https://www.encodeproject.org/files/ENCFF033ACD/@@download/ENCFF033ACD.bam hg19 released low read depth missing unfiltered alignments ENCFF677HTP bam alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFT, ENCFF807MUK 1309733864 ENCODE Processing Pipeline b2df035f725acf5478ffb7961d0ab25c https://www.encodeproject.org/files/ENCFF677HTP/@@download/ENCFF677HTP.bam hg19 released low read depth missing unfiltered alignments ENCFF736AQU bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033ACD, ENCFF839YOM 427760727 ENCODE Processing Pipeline 2328608fd5fdda3a1a19fa0f3a8acee2 https://www.encodeproject.org/files/ENCFF736AQU/@@download/ENCFF736AQU.bigWig hg19 released low read depth missing unfiltered alignments, mismatched status ENCFF344WWF bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033ACD, ENCFF839YOM 607920850 ENCODE Processing Pipeline efa78a8de89ef69f63bbcdcb681ea6c8 https://www.encodeproject.org/files/ENCFF344WWF/@@download/ENCFF344WWF.bigWig hg19 released low read depth missing unfiltered alignments, mismatched status ENCFF421GUB bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092ACZ, ENCFF677HTP 523234890 ENCODE Processing Pipeline 681529f2e4e13651aa048ae224282b26 https://www.encodeproject.org/files/ENCFF421GUB/@@download/ENCFF421GUB.bigWig hg19 released low read depth missing unfiltered alignments ENCFF433SGA bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092ACZ, ENCFF677HTP 512391931 ENCODE Processing Pipeline adcbffb833140fa9b766172c509954c1 https://www.encodeproject.org/files/ENCFF433SGA/@@download/ENCFF433SGA.bigWig hg19 released low read depth missing unfiltered alignments ENCFF115HJG bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033ACD, ENCFF092ACZ, ENCFF677HTP, ENCFF839YOM 1097914672 ENCODE Processing Pipeline 2994c779dc62a16bff56c4f4ca71532d https://www.encodeproject.org/files/ENCFF115HJG/@@download/ENCFF115HJG.bigWig hg19 released low read depth missing unfiltered alignments, mismatched status ENCFF452PIY bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092ACZ, ENCFF677HTP 5762842 ENCODE Processing Pipeline b7329c65f34508967b1dd2c81c466aed https://www.encodeproject.org/files/ENCFF452PIY/@@download/ENCFF452PIY.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF949DLB bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033ACD, ENCFF092ACZ, ENCFF677HTP, ENCFF839YOM 6806702 ENCODE Processing Pipeline 2ec7e64ed4b7018117a83b7f263f621f https://www.encodeproject.org/files/ENCFF949DLB/@@download/ENCFF949DLB.bed.gz hg19 released low read depth missing unfiltered alignments, mismatched status ENCFF124EOM bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF696SWI 13200194 ENCODE Processing Pipeline 963ec485a4705af6b285148b121177ec https://www.encodeproject.org/files/ENCFF124EOM/@@download/ENCFF124EOM.bigBed hg19 released low read depth missing unfiltered alignments ENCFF256HNH bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF452PIY 11225440 ENCODE Processing Pipeline 81cc28e6e9da05e44d977f155f4b88f3 https://www.encodeproject.org/files/ENCFF256HNH/@@download/ENCFF256HNH.bigBed hg19 released low read depth missing unfiltered alignments ENCFF853HNW bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033ACD, ENCFF092ACZ, ENCFF677HTP, ENCFF839YOM 1003605413 ENCODE Processing Pipeline 9f6963c757d1739d1a61cd1341935d0c https://www.encodeproject.org/files/ENCFF853HNW/@@download/ENCFF853HNW.bigWig hg19 released low read depth missing unfiltered alignments, mismatched status ENCFF696SWI bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033ACD, ENCFF839YOM 5763732 ENCODE Processing Pipeline 82bc8dc22f3abb4669443c977af2f5c4 https://www.encodeproject.org/files/ENCFF696SWI/@@download/ENCFF696SWI.bed.gz hg19 released low read depth missing unfiltered alignments, mismatched status ENCFF759GXO bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF949DLB 13342799 ENCODE Processing Pipeline dc9664cf4cdbc0550af8c029e18132ce https://www.encodeproject.org/files/ENCFF759GXO/@@download/ENCFF759GXO.bigBed hg19 released low read depth missing unfiltered alignments ENCFF866DXQ bam unfiltered alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFT, ENCFF643CGH 1775290559 ENCODE Processing Pipeline a3ea240753398cbe69861070292c8c18 https://www.encodeproject.org/files/ENCFF866DXQ/@@download/ENCFF866DXQ.bam GRCh38 released low read depth missing unfiltered alignments ENCFF556EGU bam unfiltered alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFS, ENCFF643CGH 1315953002 ENCODE Processing Pipeline 136b500f938f8eeec0a1b8b7f9fa5a7b https://www.encodeproject.org/files/ENCFF556EGU/@@download/ENCFF556EGU.bam GRCh38 released low read depth missing unfiltered alignments ENCFF283ZIL bam alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFS, ENCFF643CGH 984473579 ENCODE Processing Pipeline 9ea454d2dafc210153040838ae40cb7d https://www.encodeproject.org/files/ENCFF283ZIL/@@download/ENCFF283ZIL.bam GRCh38 released low read depth missing unfiltered alignments ENCFF903JXA bam alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFT, ENCFF643CGH 1309458087 ENCODE Processing Pipeline 916e7f623e602ee0fcd41501175cf5f3 https://www.encodeproject.org/files/ENCFF903JXA/@@download/ENCFF903JXA.bam GRCh38 released low read depth missing unfiltered alignments ENCFF399SVX bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF283ZIL, ENCFF709XAA 653317266 ENCODE Processing Pipeline b24ef626eb29a732d9bc7c3e77653b0f https://www.encodeproject.org/files/ENCFF399SVX/@@download/ENCFF399SVX.bigWig GRCh38 released low read depth missing unfiltered alignments ENCFF540MPS bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF285EWB, ENCFF903JXA 522672374 ENCODE Processing Pipeline 86b9c8e495d97130fd84a45fab43d5cc https://www.encodeproject.org/files/ENCFF540MPS/@@download/ENCFF540MPS.bigWig GRCh38 released low read depth missing unfiltered alignments ENCFF318UDN bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF283ZIL, ENCFF285EWB, ENCFF709XAA, ENCFF903JXA 1157951109 ENCODE Processing Pipeline f4ff06d8a3d921476a8a99006fdebbf2 https://www.encodeproject.org/files/ENCFF318UDN/@@download/ENCFF318UDN.bigWig GRCh38 released low read depth missing unfiltered alignments ENCFF254OXZ bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF283ZIL, ENCFF709XAA 407588971 ENCODE Processing Pipeline 170df6fdc5a4c36df8027009b793e304 https://www.encodeproject.org/files/ENCFF254OXZ/@@download/ENCFF254OXZ.bigWig GRCh38 released low read depth missing unfiltered alignments ENCFF524XVE bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF285EWB, ENCFF903JXA 518265468 ENCODE Processing Pipeline 2619a789c2428a93da6fb6c9c071dde7 https://www.encodeproject.org/files/ENCFF524XVE/@@download/ENCFF524XVE.bigWig GRCh38 released low read depth missing unfiltered alignments ENCFF623ZTZ bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF283ZIL, ENCFF285EWB, ENCFF709XAA, ENCFF903JXA 1009070837 ENCODE Processing Pipeline f6a87fa76ee0509048fc18e460d03fa6 https://www.encodeproject.org/files/ENCFF623ZTZ/@@download/ENCFF623ZTZ.bigWig GRCh38 released low read depth missing unfiltered alignments ENCFF459XMM bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF283ZIL, ENCFF709XAA 5535441 ENCODE Processing Pipeline 9f36fa5536e07057a8bd55924ecf5b34 https://www.encodeproject.org/files/ENCFF459XMM/@@download/ENCFF459XMM.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF373MAQ bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF285EWB, ENCFF903JXA 5517753 ENCODE Processing Pipeline c44fbb416faed138bc2700cb3ca57560 https://www.encodeproject.org/files/ENCFF373MAQ/@@download/ENCFF373MAQ.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF113GGC bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF459XMM 13125549 ENCODE Processing Pipeline e0bfcfe173f3adc8e07227809c02ed1e https://www.encodeproject.org/files/ENCFF113GGC/@@download/ENCFF113GGC.bigBed GRCh38 released low read depth missing unfiltered alignments ENCFF223LCM bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF283ZIL, ENCFF285EWB, ENCFF709XAA, ENCFF903JXA 6646058 ENCODE Processing Pipeline e286163625de797d410634fe70bc0aa8 https://www.encodeproject.org/files/ENCFF223LCM/@@download/ENCFF223LCM.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF599ZGN bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF373MAQ 11165660 ENCODE Processing Pipeline b27427d29707fe7fadf8d79f035f861f https://www.encodeproject.org/files/ENCFF599ZGN/@@download/ENCFF599ZGN.bigBed GRCh38 released low read depth missing unfiltered alignments ENCFF070XNC bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF223LCM 13355967 ENCODE Processing Pipeline 5bed44453d1eec2c924d5ad6434ef535 https://www.encodeproject.org/files/ENCFF070XNC/@@download/ENCFF070XNC.bigBed GRCh38 released low read depth missing unfiltered alignments ENCFF790MVV bigBed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF213EHL 264801 ENCODE Processing Pipeline de3c950b92d97c7c7ea22774d86d905c https://www.encodeproject.org/files/ENCFF790MVV/@@download/ENCFF790MVV.bigBed GRCh38 released low read depth missing unfiltered alignments ENCFF213EHL bed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF223LCM, ENCFF373MAQ, ENCFF419RSJ, ENCFF459XMM 112827 ENCODE Processing Pipeline e870575eff4d1e6f09e3962b18bac47c https://www.encodeproject.org/files/ENCFF213EHL/@@download/ENCFF213EHL.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF641AXD bed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF223LCM, ENCFF373MAQ, ENCFF419RSJ, ENCFF459XMM 137540 ENCODE Processing Pipeline 7e814721301eb261472ed85b8adbeed3 https://www.encodeproject.org/files/ENCFF641AXD/@@download/ENCFF641AXD.bed.gz GRCh38 released low read depth missing unfiltered alignments ENCFF059EJM bigBed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF641AXD 302787 ENCODE Processing Pipeline 957474ae04b9926869957b7a451f539e https://www.encodeproject.org/files/ENCFF059EJM/@@download/ENCFF059EJM.bigBed GRCh38 released low read depth missing unfiltered alignments ENCFF508XCA bigBed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF605XWU 201782 ENCODE Processing Pipeline 46ed6797d57f0a7f4e735e23a0ce9153 https://www.encodeproject.org/files/ENCFF508XCA/@@download/ENCFF508XCA.bigBed hg19 released low read depth missing unfiltered alignments ENCFF588UCZ bed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF452PIY, ENCFF696SWI, ENCFF949DLB 123356 ENCODE Processing Pipeline 48a49f9db1953c2afcbdcac760b25d65 https://www.encodeproject.org/files/ENCFF588UCZ/@@download/ENCFF588UCZ.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF605XWU bed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF452PIY, ENCFF696SWI, ENCFF949DLB 99828 ENCODE Processing Pipeline 6e8f01890c80cd8d09ab802ad05dce9b https://www.encodeproject.org/files/ENCFF605XWU/@@download/ENCFF605XWU.bed.gz hg19 released low read depth missing unfiltered alignments ENCFF304CWF bigBed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF588UCZ 280751 ENCODE Processing Pipeline 13d6272bfc661296c2efc29c7349d978 https://www.encodeproject.org/files/ENCFF304CWF/@@download/ENCFF304CWF.bigBed hg19 released low read depth missing unfiltered alignments ENCFF000RGB bam alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RGQ 774525907 Richard Myers, HAIB 87abd282421e6349aa121ac1fc72ebd4 https://www.encodeproject.org/files/ENCFF000RGB/@@download/ENCFF000RGB.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RGC bigBed broadPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UQX 506938 Richard Myers, HAIB a62dcab21d7c63ae50f218e1cc2d83bf https://www.encodeproject.org/files/ENCFF000RGC/@@download/ENCFF000RGC.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RGD bigBed broadPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UQY 640156 Richard Myers, HAIB 781145a8ff3a848bbe2f8bf0896eb0b0 https://www.encodeproject.org/files/ENCFF000RGD/@@download/ENCFF000RGD.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RGE bam alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RGM 431056719 Richard Myers, HAIB b27615ac66b40f7a943621ab6d74bd09 https://www.encodeproject.org/files/ENCFF000RGE/@@download/ENCFF000RGE.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RGG bigWig raw signal ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 1 19577669 Richard Myers, HAIB 7bd0343d238cd8aa883a9bf7d7683d6e https://www.encodeproject.org/files/ENCFF000RGG/@@download/ENCFF000RGG.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000RGH bigWig raw signal ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 1 14597311 Richard Myers, HAIB cfc152b195a5e2a32624b1b3e31ae8a2 https://www.encodeproject.org/files/ENCFF000RGH/@@download/ENCFF000RGH.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000RGM fastq reads ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 398295016 Richard Myers, HAIB efef124ccf0cd5f0b135a5fd5b83dc4b https://www.encodeproject.org/files/ENCFF000RGM/@@download/ENCFF000RGM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RGI/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RGQ fastq reads ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 741829493 Richard Myers, HAIB 5bbd044ff53e4eb30b54e812b3143d76 https://www.encodeproject.org/files/ENCFF000RGQ/@@download/ENCFF000RGQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RGI/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UQX bed broadPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 1 335538 Richard Myers, HAIB ef389ef002ceb2fb9226799ee14faa7e https://www.encodeproject.org/files/ENCFF001UQX/@@download/ENCFF001UQX.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UQY bed broadPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 1 326040 Richard Myers, HAIB 6940346b925f638590bd539e13a9221f https://www.encodeproject.org/files/ENCFF001UQY/@@download/ENCFF001UQY.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CNR bed narrowPeak optimal idr thresholded peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 381400 ENCODE Consortium Analysis Working Group 2b841aa96ef5710fd1b227e9c8ab262d https://www.encodeproject.org/files/ENCFF002CNR/@@download/ENCFF002CNR.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF527ZMB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE ENCFF002CNR 760509 ENCODE Consortium 2ece21fb5267b6f15a158e17a3c3fbc0 https://www.encodeproject.org/files/ENCFF527ZMB/@@download/ENCFF527ZMB.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF387RDF bam unfiltered alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGM, ENCFF643CGH 503728984 ENCODE Processing Pipeline aa62a083b853f9111bf250a24659f0a6 https://www.encodeproject.org/files/ENCFF387RDF/@@download/ENCFF387RDF.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF434GLS bam alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGM, ENCFF643CGH 248531688 ENCODE Processing Pipeline a83ad6b8b23101355522b53211799963 https://www.encodeproject.org/files/ENCFF434GLS/@@download/ENCFF434GLS.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF383FRS bam unfiltered alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGQ, ENCFF643CGH 899469826 ENCODE Processing Pipeline fd5e8416906129ed1ab103d4af207bb5 https://www.encodeproject.org/files/ENCFF383FRS/@@download/ENCFF383FRS.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF982TSB bam alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGQ, ENCFF643CGH 393972607 ENCODE Processing Pipeline 3617b91929554d061a6e1ba51bb23a3c https://www.encodeproject.org/files/ENCFF982TSB/@@download/ENCFF982TSB.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF539RIF bam unfiltered alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGM, ENCFF807MUK 502036847 ENCODE Processing Pipeline 412397c8facce54d4a6ca141266b88fd https://www.encodeproject.org/files/ENCFF539RIF/@@download/ENCFF539RIF.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF096MNC bam alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGM, ENCFF807MUK 248722652 ENCODE Processing Pipeline c5b057e54987a9407938f3bb2c3ca6f5 https://www.encodeproject.org/files/ENCFF096MNC/@@download/ENCFF096MNC.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF229IZG bam unfiltered alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGQ, ENCFF807MUK 896149952 ENCODE Processing Pipeline 8787c0b8a3ac7d7a0a9a7f4ac42a3ff6 https://www.encodeproject.org/files/ENCFF229IZG/@@download/ENCFF229IZG.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF755XST bam alignments ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGQ, ENCFF807MUK 394222968 ENCODE Processing Pipeline e648160fc8cf074a78976c06fd4c90b8 https://www.encodeproject.org/files/ENCFF755XST/@@download/ENCFF755XST.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF543WPY bigWig signal p-value ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF982TSB 355597246 ENCODE Processing Pipeline 3f3dbf05ac4636f91031dff0f5ba7be3 https://www.encodeproject.org/files/ENCFF543WPY/@@download/ENCFF543WPY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF536VJP bigWig fold change over control ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF434GLS 145703133 ENCODE Processing Pipeline 7a70dbd3dc5f657fe8ab0808363ec9fd https://www.encodeproject.org/files/ENCFF536VJP/@@download/ENCFF536VJP.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF196ASP bed narrowPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF982TSB 4131555 ENCODE Processing Pipeline 64b7354c7b51619ca6128bf33675c308 https://www.encodeproject.org/files/ENCFF196ASP/@@download/ENCFF196ASP.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF632WIC bigWig fold change over control ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF434GLS, ENCFF982TSB 331833384 ENCODE Processing Pipeline 88a6e75a2fd47388c91a312c90084eff https://www.encodeproject.org/files/ENCFF632WIC/@@download/ENCFF632WIC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF550FMO bigBed narrowPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF849SJE 10884992 ENCODE Processing Pipeline cc1bf4254ca8ffcf874efe00d8eb4b19 https://www.encodeproject.org/files/ENCFF550FMO/@@download/ENCFF550FMO.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF698NYD bed narrowPeak conservative idr thresholded peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077POH, ENCFF196ASP, ENCFF419RSJ, ENCFF849SJE 325464 ENCODE Processing Pipeline b10d33e4131d510bf72deb4e1bd3c53c https://www.encodeproject.org/files/ENCFF698NYD/@@download/ENCFF698NYD.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF849SJE bed narrowPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF434GLS, ENCFF982TSB 4692154 ENCODE Processing Pipeline 08f6d8c231bfaed6f2a814d88a853d08 https://www.encodeproject.org/files/ENCFF849SJE/@@download/ENCFF849SJE.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF065GKJ bigBed narrowPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF196ASP 10154070 ENCODE Processing Pipeline 5bd22053b6b6bab6ad38f0df1dc11522 https://www.encodeproject.org/files/ENCFF065GKJ/@@download/ENCFF065GKJ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF794FMX bigWig signal p-value ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF434GLS, ENCFF982TSB 411630268 ENCODE Processing Pipeline c7ff24f7abebaac7eb8dde555722b4b0 https://www.encodeproject.org/files/ENCFF794FMX/@@download/ENCFF794FMX.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF503HZN bigWig signal p-value ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF434GLS 355178827 ENCODE Processing Pipeline 184995c239d31f862eb8e4df2df43652 https://www.encodeproject.org/files/ENCFF503HZN/@@download/ENCFF503HZN.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF774TEU bigWig fold change over control ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF982TSB 220364876 ENCODE Processing Pipeline 52cc952d7f6ae99a779ecee438796dd0 https://www.encodeproject.org/files/ENCFF774TEU/@@download/ENCFF774TEU.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF026YGL bigBed narrowPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077POH 5629566 ENCODE Processing Pipeline 2a586b2cb0bc5a00e66e7a9686456e00 https://www.encodeproject.org/files/ENCFF026YGL/@@download/ENCFF026YGL.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF077POH bed narrowPeak peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF434GLS 2772280 ENCODE Processing Pipeline c4ee818c7433217824580809180caac3 https://www.encodeproject.org/files/ENCFF077POH/@@download/ENCFF077POH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF458SJU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF452RZW 575368 ENCODE Processing Pipeline 1457af92c4e66e2db6f400db20e43867 https://www.encodeproject.org/files/ENCFF458SJU/@@download/ENCFF458SJU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF680WWW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF698NYD 538829 ENCODE Processing Pipeline a17b1e0e073bcc32c31eaf9653074d7c https://www.encodeproject.org/files/ENCFF680WWW/@@download/ENCFF680WWW.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF452RZW bed narrowPeak optimal idr thresholded peaks ENCSR000BMF ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid USF1-human ENCAB000AMG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077POH, ENCFF196ASP, ENCFF419RSJ, ENCFF849SJE 356838 ENCODE Processing Pipeline c6cb8b582ad34efa1f898a39c97ba8db https://www.encodeproject.org/files/ENCFF452RZW/@@download/ENCFF452RZW.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PMO bam alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PMZ 965328968 Richard Myers, HAIB 0fae77ec60cf75a6ea73e83d7f39bfd3 https://www.encodeproject.org/files/ENCFF000PMO/@@download/ENCFF000PMO.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PMP bigBed broadPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHA 565313 Richard Myers, HAIB 5ed0a3287c406c5917fe594ee65746ea https://www.encodeproject.org/files/ENCFF000PMP/@@download/ENCFF000PMP.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PMQ bigBed broadPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHB 826914 Richard Myers, HAIB b57eebc4ece9840c08346170133d5601 https://www.encodeproject.org/files/ENCFF000PMQ/@@download/ENCFF000PMQ.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PMR bam alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PNA 1147567157 Richard Myers, HAIB 43dfd582adaed8d5a450f81e827ff7cc https://www.encodeproject.org/files/ENCFF000PMR/@@download/ENCFF000PMR.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PMS bigWig raw signal ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 23055356 Richard Myers, HAIB 5b8b52d1688bd6bdb62e58473937b840 https://www.encodeproject.org/files/ENCFF000PMS/@@download/ENCFF000PMS.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PMT bigWig raw signal ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 26518547 Richard Myers, HAIB d93a735595f5f1addc30033c49e69dae https://www.encodeproject.org/files/ENCFF000PMT/@@download/ENCFF000PMT.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PMZ fastq reads ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 877806675 Richard Myers, HAIB f79aec96c013042b98d554301f07ce4d https://www.encodeproject.org/files/ENCFF000PMZ/@@download/ENCFF000PMZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PNA fastq reads ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1049939264 Richard Myers, HAIB b847c7e02bd450d79c3027f5d2e12155 https://www.encodeproject.org/files/ENCFF000PNA/@@download/ENCFF000PNA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UHA bed broadPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 341090 Richard Myers, HAIB 073190c3926d5be0a05c0e4c3998497f https://www.encodeproject.org/files/ENCFF001UHA/@@download/ENCFF001UHA.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UHB bed broadPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 408531 Richard Myers, HAIB e6fab04d0f65cae0a91276051353f5b5 https://www.encodeproject.org/files/ENCFF001UHB/@@download/ENCFF001UHB.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CKV bed narrowPeak optimal idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 652956 ENCODE Consortium Analysis Working Group 551ba2c2a796f4754ea17a42edf95bd9 https://www.encodeproject.org/files/ENCFF002CKV/@@download/ENCFF002CKV.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF567QUK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE ENCFF002CKV 1507541 ENCODE Consortium 5f850e17cbf41cbb89f870ae6fcd96d8 https://www.encodeproject.org/files/ENCFF567QUK/@@download/ENCFF567QUK.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF432SGP bam unfiltered alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PMZ, ENCFF643CGH 1139159842 ENCODE Processing Pipeline 2f88cfd1e22487f39e1ec3789b6a78be https://www.encodeproject.org/files/ENCFF432SGP/@@download/ENCFF432SGP.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF522HWT bam alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PMZ, ENCFF643CGH 629313007 ENCODE Processing Pipeline 2e069292d78c6bd361d1238ebf2d1ba9 https://www.encodeproject.org/files/ENCFF522HWT/@@download/ENCFF522HWT.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF246IMM bam alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNA, ENCFF643CGH 915577136 ENCODE Processing Pipeline 6b909ea1d8c4ae5213c2b32b8a561397 https://www.encodeproject.org/files/ENCFF246IMM/@@download/ENCFF246IMM.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF035CSV bam unfiltered alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNA, ENCFF643CGH 1393233236 ENCODE Processing Pipeline fbd008ed02a48d8fab4c089f9d2e3cb1 https://www.encodeproject.org/files/ENCFF035CSV/@@download/ENCFF035CSV.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF219HMK bam unfiltered alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PMZ, ENCFF807MUK 1134968717 ENCODE Processing Pipeline 1a101ad02c2627ec868cd8b00da0f772 https://www.encodeproject.org/files/ENCFF219HMK/@@download/ENCFF219HMK.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF373JKP bam alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PMZ, ENCFF807MUK 629664344 ENCODE Processing Pipeline 1465cd5a3cae91c83ea71c9af8ab4b8d https://www.encodeproject.org/files/ENCFF373JKP/@@download/ENCFF373JKP.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF581OIB bam alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNA, ENCFF807MUK 915914626 ENCODE Processing Pipeline 82247508f2d9afd0b03e0fb4cc2c5189 https://www.encodeproject.org/files/ENCFF581OIB/@@download/ENCFF581OIB.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF561DCM bam unfiltered alignments ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNA, ENCFF807MUK 1389531512 ENCODE Processing Pipeline f9c7ef70e8387860e4370f567c31dce4 https://www.encodeproject.org/files/ENCFF561DCM/@@download/ENCFF561DCM.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF163CZB bigWig signal p-value ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF522HWT 513421003 ENCODE Processing Pipeline dc81574ed16c1beae59b71adae44e851 https://www.encodeproject.org/files/ENCFF163CZB/@@download/ENCFF163CZB.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF646MYY bigWig signal p-value ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF246IMM, ENCFF285LVE 462050196 ENCODE Processing Pipeline bc561976908ed9c3f5de4cc995d118c1 https://www.encodeproject.org/files/ENCFF646MYY/@@download/ENCFF646MYY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF555PAU bigWig signal p-value ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF246IMM, ENCFF285LVE, ENCFF522HWT 547366184 ENCODE Processing Pipeline f44bbe8b217af2b616da34d2a82186fa https://www.encodeproject.org/files/ENCFF555PAU/@@download/ENCFF555PAU.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF885QMD bigWig fold change over control ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF246IMM, ENCFF285LVE 444119655 ENCODE Processing Pipeline c3d01284f1282bbe2bd3f0627a1deafd https://www.encodeproject.org/files/ENCFF885QMD/@@download/ENCFF885QMD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF952OBS bigWig fold change over control ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF522HWT 335737383 ENCODE Processing Pipeline f339c1db61a1a144b82d907098a5b33e https://www.encodeproject.org/files/ENCFF952OBS/@@download/ENCFF952OBS.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF552BPU bigBed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF213VZV 10842629 ENCODE Processing Pipeline dba6f8aabbac3722fc3487aa2b541e32 https://www.encodeproject.org/files/ENCFF552BPU/@@download/ENCFF552BPU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF023LJV bed narrowPeak conservative idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF009RZY, ENCFF213VZV, ENCFF411ZQT, ENCFF419RSJ 439387 ENCODE Processing Pipeline 46adc32784a5cdba0cee185d374e45a5 https://www.encodeproject.org/files/ENCFF023LJV/@@download/ENCFF023LJV.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF071VVA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF023LJV 927579 ENCODE Processing Pipeline db66114997dbfdef8affe83ce4fa2335 https://www.encodeproject.org/files/ENCFF071VVA/@@download/ENCFF071VVA.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF772VBV bigWig fold change over control ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF246IMM, ENCFF285LVE, ENCFF522HWT 667698621 ENCODE Processing Pipeline d16dde9c84778af1b93feae9a83e24f6 https://www.encodeproject.org/files/ENCFF772VBV/@@download/ENCFF772VBV.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF411ZQT bed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF246IMM, ENCFF285LVE 5419355 ENCODE Processing Pipeline 61a6a91d03347f4fed77277409d7648d https://www.encodeproject.org/files/ENCFF411ZQT/@@download/ENCFF411ZQT.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF674QCU bed narrowPeak optimal idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF009RZY, ENCFF213VZV, ENCFF411ZQT, ENCFF419RSJ 545544 ENCODE Processing Pipeline 32f605c61fc03fcc61b819ed18cf7257 https://www.encodeproject.org/files/ENCFF674QCU/@@download/ENCFF674QCU.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF009RZY bed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF246IMM, ENCFF285LVE, ENCFF522HWT 5905830 ENCODE Processing Pipeline 96142ec6a229c5877bb208b516c2c54f https://www.encodeproject.org/files/ENCFF009RZY/@@download/ENCFF009RZY.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF665WOY bigBed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF411ZQT 13135381 ENCODE Processing Pipeline f97bfadbdb361a9a8f84ff67bdef92aa https://www.encodeproject.org/files/ENCFF665WOY/@@download/ENCFF665WOY.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF648UFU bigBed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF009RZY 13505650 ENCODE Processing Pipeline 6a977df1b23fded23e44bb31886a61c5 https://www.encodeproject.org/files/ENCFF648UFU/@@download/ENCFF648UFU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF213VZV bed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF522HWT 4787951 ENCODE Processing Pipeline 28d17cd40a66ae66f11a11fcdf782986 https://www.encodeproject.org/files/ENCFF213VZV/@@download/ENCFF213VZV.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF805JLO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF674QCU 1098591 ENCODE Processing Pipeline 6888f2510a8d29dd164d2b28ad33b6d7 https://www.encodeproject.org/files/ENCFF805JLO/@@download/ENCFF805JLO.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF207XFY bigWig fold change over control ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346RZT, ENCFF581OIB 444436971 ENCODE Processing Pipeline fb602a05499d2c8f246489f9fa5b5651 https://www.encodeproject.org/files/ENCFF207XFY/@@download/ENCFF207XFY.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF908HDQ bed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF346RZT, ENCFF373JKP, ENCFF581OIB 5907185 ENCODE Processing Pipeline d8441b04dad51736f52227c5ce9b331e https://www.encodeproject.org/files/ENCFF908HDQ/@@download/ENCFF908HDQ.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF321BYG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF811CMJ 926429 ENCODE Processing Pipeline 5b40cf88c28355566a26562d49d17c54 https://www.encodeproject.org/files/ENCFF321BYG/@@download/ENCFF321BYG.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF711GNA bigWig signal p-value ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF346RZT, ENCFF373JKP 445619371 ENCODE Processing Pipeline b87a6095b243cd348232f077c2f7e0db https://www.encodeproject.org/files/ENCFF711GNA/@@download/ENCFF711GNA.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF218CEG bigWig fold change over control ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF346RZT, ENCFF373JKP 353014447 ENCODE Processing Pipeline fe2ef3f838797bd1309eed3ad1f50ee0 https://www.encodeproject.org/files/ENCFF218CEG/@@download/ENCFF218CEG.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF906ESV bed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF346RZT, ENCFF373JKP 4787613 ENCODE Processing Pipeline 9eeaf89d2ba54956f5b1a59068dc294b https://www.encodeproject.org/files/ENCFF906ESV/@@download/ENCFF906ESV.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF547POU bed narrowPeak optimal idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF397JOR, ENCFF906ESV, ENCFF908HDQ 549606 ENCODE Processing Pipeline 413e4eb5d23e404dfb66b7c3d8069a71 https://www.encodeproject.org/files/ENCFF547POU/@@download/ENCFF547POU.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF960HNF bigWig signal p-value ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF346RZT, ENCFF373JKP, ENCFF581OIB 548295740 ENCODE Processing Pipeline bb29b11d60ca3b7fa0ef421d388e1024 https://www.encodeproject.org/files/ENCFF960HNF/@@download/ENCFF960HNF.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF582IFA bigWig fold change over control ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF346RZT, ENCFF373JKP, ENCFF581OIB 665814423 ENCODE Processing Pipeline a2eddc2b8e78ca5bc8cb704de1eb9738 https://www.encodeproject.org/files/ENCFF582IFA/@@download/ENCFF582IFA.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF397JOR bed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346RZT, ENCFF581OIB 5439352 ENCODE Processing Pipeline 0a867320804a243e5690f3226ee3ba8c https://www.encodeproject.org/files/ENCFF397JOR/@@download/ENCFF397JOR.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF811CMJ bed narrowPeak conservative idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF397JOR, ENCFF906ESV, ENCFF908HDQ 438735 ENCODE Processing Pipeline 023ffc56a5c219c7fca1eafdee2943ef https://www.encodeproject.org/files/ENCFF811CMJ/@@download/ENCFF811CMJ.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF132ZVN bigWig signal p-value ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346RZT, ENCFF581OIB 478097253 ENCODE Processing Pipeline e7590e074be2d87f32fc67a7b5e5b788 https://www.encodeproject.org/files/ENCFF132ZVN/@@download/ENCFF132ZVN.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF263GFM bigBed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF906ESV 10834739 ENCODE Processing Pipeline d75c21cc027d052204b07f5b6652e900 https://www.encodeproject.org/files/ENCFF263GFM/@@download/ENCFF263GFM.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF317IOU bigBed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF397JOR 13154614 ENCODE Processing Pipeline b955b8a475ffc82e7e3e9a55e29fdb50 https://www.encodeproject.org/files/ENCFF317IOU/@@download/ENCFF317IOU.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF637TYJ bigBed narrowPeak peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF908HDQ 13507160 ENCODE Processing Pipeline 09b7062f668cf83eaa8fa2a730c06b84 https://www.encodeproject.org/files/ENCFF637TYJ/@@download/ENCFF637TYJ.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF257WQI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF547POU 1104889 ENCODE Processing Pipeline 6c20bc5702f3c3f24fa1d362afeb7f6b https://www.encodeproject.org/files/ENCFF257WQI/@@download/ENCFF257WQI.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF796BOA fastq reads ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 1 50 single-ended 1358844703 Richard Myers, HAIB 20b8da5c2488aeeff91332bbe228fed6 SRA:SRR5339221 https://www.encodeproject.org/files/ENCFF796BOA/@@download/ENCFF796BOA.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF142GQB fastq reads ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 1 50 single-ended 1258325290 Richard Myers, HAIB 4a57c97f290a14ace0a4e2c368cd6385 SRA:SRR5339222 https://www.encodeproject.org/files/ENCFF142GQB/@@download/ENCFF142GQB.fastq.gz HiSeq 2000 /files/ENCFF002BGB/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF487NQY bam alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 50 ENCFF142GQB, ENCFF807MUK 1009953701 ENCODE Processing Pipeline 2509ad9514586aad2df8f0f7be4a0ff7 https://www.encodeproject.org/files/ENCFF487NQY/@@download/ENCFF487NQY.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF272HDX bam alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 50 ENCFF796BOA, ENCFF807MUK 1111429634 ENCODE Processing Pipeline faa4f859dbcd90db520d89ca7ffd0a87 https://www.encodeproject.org/files/ENCFF272HDX/@@download/ENCFF272HDX.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF756QSD bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF092ACZ, ENCFF487NQY 542119267 ENCODE Processing Pipeline 53c0f0e3e38c39fea54b235927e403da https://www.encodeproject.org/files/ENCFF756QSD/@@download/ENCFF756QSD.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF869EZL bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF092ACZ, ENCFF272HDX, ENCFF487NQY, ENCFF839YOM 1206754032 ENCODE Processing Pipeline 9807cfa1cc4432696fcd8fb97cca631e https://www.encodeproject.org/files/ENCFF869EZL/@@download/ENCFF869EZL.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF798CQJ bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF272HDX, ENCFF839YOM 617209216 ENCODE Processing Pipeline e452d86bb369a41ec266848a9cc7ca15 https://www.encodeproject.org/files/ENCFF798CQJ/@@download/ENCFF798CQJ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF323KEP bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF092ACZ, ENCFF487NQY 465466276 ENCODE Processing Pipeline 1bdaa0401d545cedda251d34c41e16ee https://www.encodeproject.org/files/ENCFF323KEP/@@download/ENCFF323KEP.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF788TFX bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF272HDX, ENCFF839YOM 503319645 ENCODE Processing Pipeline 798f9c8d5ef34ff07fd0f16816fb9609 https://www.encodeproject.org/files/ENCFF788TFX/@@download/ENCFF788TFX.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF145XHA bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF092ACZ, ENCFF272HDX, ENCFF487NQY, ENCFF839YOM 1065968571 ENCODE Processing Pipeline 2183aab7d239db62adc4ad6e8f6cede3 https://www.encodeproject.org/files/ENCFF145XHA/@@download/ENCFF145XHA.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF756WGZ bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF092ACZ, ENCFF487NQY 5778675 ENCODE Processing Pipeline 2fe8e9448518ab9dfb022e968a4fd7bd https://www.encodeproject.org/files/ENCFF756WGZ/@@download/ENCFF756WGZ.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF366XGK bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF576WZY 13161219 ENCODE Processing Pipeline aeedda70ef21e55b095e704dd599f8c4 https://www.encodeproject.org/files/ENCFF366XGK/@@download/ENCFF366XGK.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF954SDF bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF272HDX, ENCFF839YOM 6328125 ENCODE Processing Pipeline 8ad6e08b85a049cbcb940186df1541df https://www.encodeproject.org/files/ENCFF954SDF/@@download/ENCFF954SDF.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF211FHJ bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF954SDF 13104633 ENCODE Processing Pipeline 080d152675549a160098f59f761da11a https://www.encodeproject.org/files/ENCFF211FHJ/@@download/ENCFF211FHJ.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF576WZY bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF092ACZ, ENCFF272HDX, ENCFF487NQY, ENCFF839YOM 6959286 ENCODE Processing Pipeline 6ca64bf044354a89ebebfc8755846157 https://www.encodeproject.org/files/ENCFF576WZY/@@download/ENCFF576WZY.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF313RQA bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF756WGZ 13257280 ENCODE Processing Pipeline 0f69250caa5af93d74b4d224f301627b https://www.encodeproject.org/files/ENCFF313RQA/@@download/ENCFF313RQA.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF334LTA bam unfiltered alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 50 ENCFF142GQB, ENCFF643CGH 1337687977 ENCODE Processing Pipeline 4398f0013af16f92a2d8aa38a556653d https://www.encodeproject.org/files/ENCFF334LTA/@@download/ENCFF334LTA.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF542FVP bam unfiltered alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 50 ENCFF643CGH, ENCFF796BOA 1452746504 ENCODE Processing Pipeline 54ae208db0a543dc8b0210b6d1ef6992 https://www.encodeproject.org/files/ENCFF542FVP/@@download/ENCFF542FVP.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF179DZP bam alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 50 ENCFF142GQB, ENCFF643CGH 1009499620 ENCODE Processing Pipeline 203e5b677d986af466c7c1aa5b23528e https://www.encodeproject.org/files/ENCFF179DZP/@@download/ENCFF179DZP.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF022IWG bam alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 50 ENCFF643CGH, ENCFF796BOA 1110930941 ENCODE Processing Pipeline 2d7b6ff4a50d0ca7899669eace8ef953 https://www.encodeproject.org/files/ENCFF022IWG/@@download/ENCFF022IWG.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF530JRK bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF179DZP, ENCFF285EWB 609496334 ENCODE Processing Pipeline 989ff52eaeed5fa6ec1e7e96f5e4e72a https://www.encodeproject.org/files/ENCFF530JRK/@@download/ENCFF530JRK.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF802ZEI bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF022IWG, ENCFF709XAA 576816595 ENCODE Processing Pipeline 7e640b9ab25b345329e38b5bb978387a https://www.encodeproject.org/files/ENCFF802ZEI/@@download/ENCFF802ZEI.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF444QFG bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF022IWG, ENCFF179DZP, ENCFF285EWB, ENCFF709XAA 1168088718 ENCODE Processing Pipeline 6f919c958fe3ef8e7917b2ad8cf95f93 https://www.encodeproject.org/files/ENCFF444QFG/@@download/ENCFF444QFG.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF590KRO bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF179DZP, ENCFF285EWB 457540907 ENCODE Processing Pipeline 49dc06c82051414cef349053a78eed36 https://www.encodeproject.org/files/ENCFF590KRO/@@download/ENCFF590KRO.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF221HDL bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF022IWG, ENCFF709XAA 519820430 ENCODE Processing Pipeline 0418cd17ed4ba2ce60696b0d0dd49ddb https://www.encodeproject.org/files/ENCFF221HDL/@@download/ENCFF221HDL.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF169IXM bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF022IWG, ENCFF179DZP, ENCFF285EWB, ENCFF709XAA 1063890589 ENCODE Processing Pipeline fe70be4d4121862dc5de037aa9b00c49 https://www.encodeproject.org/files/ENCFF169IXM/@@download/ENCFF169IXM.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF012VEN bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF179DZP, ENCFF285EWB 5575038 ENCODE Processing Pipeline a0da133bb02c909a59365e9c0fb5b1c6 https://www.encodeproject.org/files/ENCFF012VEN/@@download/ENCFF012VEN.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF912NOY bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF012VEN 13177542 ENCODE Processing Pipeline 3ccb8844ad3da7a20ee072fcfa909eae https://www.encodeproject.org/files/ENCFF912NOY/@@download/ENCFF912NOY.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF616ZNS bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF022IWG, ENCFF709XAA 6154120 ENCODE Processing Pipeline 401c8e3130f974f39b62190bbd35b252 https://www.encodeproject.org/files/ENCFF616ZNS/@@download/ENCFF616ZNS.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF749TXQ bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF022IWG, ENCFF179DZP, ENCFF285EWB, ENCFF709XAA 6839954 ENCODE Processing Pipeline 440dd0736e75bd9626047af766d381a7 https://www.encodeproject.org/files/ENCFF749TXQ/@@download/ENCFF749TXQ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF652WXM bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF616ZNS 13080977 ENCODE Processing Pipeline ae1204ef8ff9ac9fb94507e2b7dcdd61 https://www.encodeproject.org/files/ENCFF652WXM/@@download/ENCFF652WXM.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF915HPN bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF749TXQ 13153933 ENCODE Processing Pipeline 292d59f428f81ef89fe68c87a07b2335 https://www.encodeproject.org/files/ENCFF915HPN/@@download/ENCFF915HPN.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF416YED bigBed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF272LLG 480593 ENCODE Processing Pipeline ce8572a36f11f88750b189c0450316a8 https://www.encodeproject.org/files/ENCFF416YED/@@download/ENCFF416YED.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF423GUZ bed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF012VEN, ENCFF419RSJ, ENCFF616ZNS, ENCFF749TXQ 194393 ENCODE Processing Pipeline 2d026b202d227201c41b84d65b209702 https://www.encodeproject.org/files/ENCFF423GUZ/@@download/ENCFF423GUZ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF712PYE bigBed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF423GUZ 389797 ENCODE Processing Pipeline b7cf025520e2c3a09d5634f9b2409b75 https://www.encodeproject.org/files/ENCFF712PYE/@@download/ENCFF712PYE.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF272LLG bed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF012VEN, ENCFF419RSJ, ENCFF616ZNS, ENCFF749TXQ 262233 ENCODE Processing Pipeline ef8ff622f37beebd0ba43150fe879b82 https://www.encodeproject.org/files/ENCFF272LLG/@@download/ENCFF272LLG.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF833VYQ bed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF576WZY, ENCFF756WGZ, ENCFF954SDF 238886 ENCODE Processing Pipeline a90923414b86e39ae438b8e65f6d0a43 https://www.encodeproject.org/files/ENCFF833VYQ/@@download/ENCFF833VYQ.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF715AAR bigBed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF588ZOO 370590 ENCODE Processing Pipeline 570c92c457c7f2210032c0ee0252ae0e https://www.encodeproject.org/files/ENCFF715AAR/@@download/ENCFF715AAR.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF588ZOO bed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF576WZY, ENCFF756WGZ, ENCFF954SDF 179992 ENCODE Processing Pipeline 32fb6c9ec0a02ed7aaf3f06835e9e36b https://www.encodeproject.org/files/ENCFF588ZOO/@@download/ENCFF588ZOO.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF677MJI bigBed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF833VYQ 448318 ENCODE Processing Pipeline 880d4259d506093e0ffbbc0f020f431f https://www.encodeproject.org/files/ENCFF677MJI/@@download/ENCFF677MJI.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF000RCW bam alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000RDJ 1372040560 Richard Myers, HAIB 03a054288d43e7b6bc0199755875bfdf https://www.encodeproject.org/files/ENCFF000RCW/@@download/ENCFF000RCW.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF000RCX bam alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000RDL 1451909160 Richard Myers, HAIB df001e234dd670e2238995386cd476cc https://www.encodeproject.org/files/ENCFF000RCX/@@download/ENCFF000RCX.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF000RCZ bigBed broadPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UQD 200912 Richard Myers, HAIB 39a95b84cf0703008a810ea98f9c397c https://www.encodeproject.org/files/ENCFF000RCZ/@@download/ENCFF000RCZ.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF000RDB bigBed broadPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UQE 835427 Richard Myers, HAIB 6b71f975318704b84a4256a46789f3e8 https://www.encodeproject.org/files/ENCFF000RDB/@@download/ENCFF000RDB.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF000RDC bigWig raw signal ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 1 27782450 Richard Myers, HAIB 0b1a74e884a891e7324969bef77fdc43 https://www.encodeproject.org/files/ENCFF000RDC/@@download/ENCFF000RDC.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF000RDD bigWig raw signal ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 1 31560099 Richard Myers, HAIB ce7af18f9b0c012cd51d9e152ec538f3 https://www.encodeproject.org/files/ENCFF000RDD/@@download/ENCFF000RDD.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF000RDJ fastq reads ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1267789671 Richard Myers, HAIB 037437e3194d7531dd495cd85e761315 https://www.encodeproject.org/files/ENCFF000RDJ/@@download/ENCFF000RDJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RCF/ released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF000RDL fastq reads ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1466971018 Richard Myers, HAIB ce4b47c3e3fa2ae523b7bfe194766975 https://www.encodeproject.org/files/ENCFF000RDL/@@download/ENCFF000RDL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RCB/ released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF001UQD bed broadPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 1 92502 Richard Myers, HAIB 29a9ab65cb8637b8d04ea139a911dc77 https://www.encodeproject.org/files/ENCFF001UQD/@@download/ENCFF001UQD.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF001UQE bed broadPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 1 416566 Richard Myers, HAIB 211682e47be93fe462abf4b5bb015d2d https://www.encodeproject.org/files/ENCFF001UQE/@@download/ENCFF001UQE.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF002CNM bed narrowPeak optimal idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 343551 ENCODE Consortium Analysis Working Group 70056d3abc410288536533fbc11985e0 https://www.encodeproject.org/files/ENCFF002CNM/@@download/ENCFF002CNM.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking ENCFF567DMC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE ENCFF002CNM 710384 ENCODE Consortium c42f3232ccd69034578f97babd953067 https://www.encodeproject.org/files/ENCFF567DMC/@@download/ENCFF567DMC.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF046VFA bam unfiltered alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RDL, ENCFF643CGH 1578920928 ENCODE Processing Pipeline c0646c233ae996b783a0ba0d24a82acb https://www.encodeproject.org/files/ENCFF046VFA/@@download/ENCFF046VFA.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF253FOO bam alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RDL, ENCFF643CGH 773234380 ENCODE Processing Pipeline 8a173e7cd525dbb7bda97c03f36c3ddd https://www.encodeproject.org/files/ENCFF253FOO/@@download/ENCFF253FOO.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF131FSC bam unfiltered alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RDJ, ENCFF643CGH 1433630717 ENCODE Processing Pipeline 04ff92c353fadfbf44d0ff6fae6d4f78 https://www.encodeproject.org/files/ENCFF131FSC/@@download/ENCFF131FSC.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF538TLU bam alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RDJ, ENCFF643CGH 570378145 ENCODE Processing Pipeline babcf9ad63624295d0c3219ef76cb66c https://www.encodeproject.org/files/ENCFF538TLU/@@download/ENCFF538TLU.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF970KJD bam unfiltered alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RDL, ENCFF807MUK 1574814681 ENCODE Processing Pipeline 9d5b37d32db3109f31921ed9fc2c75e0 https://www.encodeproject.org/files/ENCFF970KJD/@@download/ENCFF970KJD.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF428FLU bam alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RDL, ENCFF807MUK 773609465 ENCODE Processing Pipeline 5931ef27efe32f7ff6c7f6a644fb010f https://www.encodeproject.org/files/ENCFF428FLU/@@download/ENCFF428FLU.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF025UDZ bam alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RDJ, ENCFF807MUK 570559668 ENCODE Processing Pipeline 6050896718b9a223558d571659ab527c https://www.encodeproject.org/files/ENCFF025UDZ/@@download/ENCFF025UDZ.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF115ZTF bam unfiltered alignments ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RDJ, ENCFF807MUK 1429210226 ENCODE Processing Pipeline ac73fcf9b5731cc671f487e2fe8de3f0 https://www.encodeproject.org/files/ENCFF115ZTF/@@download/ENCFF115ZTF.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF401CXA bigWig signal p-value ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF383VZK, ENCFF538TLU 439710427 ENCODE Processing Pipeline 5f94e4e64de7b8f513493c29d2979c2a https://www.encodeproject.org/files/ENCFF401CXA/@@download/ENCFF401CXA.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF176IQW bigWig signal p-value ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF253FOO 466191254 ENCODE Processing Pipeline d6a681176f5cfc6ecab7c82062cc7575 https://www.encodeproject.org/files/ENCFF176IQW/@@download/ENCFF176IQW.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF130TPK bigWig signal p-value ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF118ENS, ENCFF253FOO, ENCFF383VZK, ENCFF538TLU 832295967 ENCODE Processing Pipeline 978739d8e02561dcd045193cf2d7bf77 https://www.encodeproject.org/files/ENCFF130TPK/@@download/ENCFF130TPK.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF422PLX bigWig signal p-value ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF025UDZ, ENCFF470EPV 430701864 ENCODE Processing Pipeline 1d40b2c832ca03a1a2715c4eb4b56ca7 https://www.encodeproject.org/files/ENCFF422PLX/@@download/ENCFF422PLX.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF969QNN bigWig signal p-value ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF080EVD, ENCFF428FLU 560883983 ENCODE Processing Pipeline b667dcc06c2372f1ee98f5ba85ee7ba8 https://www.encodeproject.org/files/ENCFF969QNN/@@download/ENCFF969QNN.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF408BNS bigWig signal p-value ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF025UDZ, ENCFF080EVD, ENCFF428FLU, ENCFF470EPV 960167937 ENCODE Processing Pipeline 0f347a2253fe423e6f0d21b86f0e4599 https://www.encodeproject.org/files/ENCFF408BNS/@@download/ENCFF408BNS.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF811MNZ bigWig fold change over control ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF383VZK, ENCFF538TLU 295271548 ENCODE Processing Pipeline 6e2298b3f64c10c1007c86e544791946 https://www.encodeproject.org/files/ENCFF811MNZ/@@download/ENCFF811MNZ.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF944MRR bigWig fold change over control ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF253FOO 364745961 ENCODE Processing Pipeline 4db55148d5c3024a3a518203c1e5148c https://www.encodeproject.org/files/ENCFF944MRR/@@download/ENCFF944MRR.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF116PTD bigWig fold change over control ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF025UDZ, ENCFF470EPV 294890975 ENCODE Processing Pipeline c0fcd5b2ab73b3e9930ac38a2f5be72b https://www.encodeproject.org/files/ENCFF116PTD/@@download/ENCFF116PTD.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF857CEX bigWig fold change over control ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF080EVD, ENCFF428FLU 368783576 ENCODE Processing Pipeline ccb13309d9b04e3735cce0d715fc8577 https://www.encodeproject.org/files/ENCFF857CEX/@@download/ENCFF857CEX.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF476PLO bigWig fold change over control ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF118ENS, ENCFF253FOO, ENCFF383VZK, ENCFF538TLU 737698840 ENCODE Processing Pipeline aaa509849732180403029b67d46d472c https://www.encodeproject.org/files/ENCFF476PLO/@@download/ENCFF476PLO.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF462TXD bigWig fold change over control ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF025UDZ, ENCFF080EVD, ENCFF428FLU, ENCFF470EPV 731319196 ENCODE Processing Pipeline 31c800a18734b7c171bd4391759289c3 https://www.encodeproject.org/files/ENCFF462TXD/@@download/ENCFF462TXD.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF363OIC bed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF383VZK, ENCFF538TLU 4080585 ENCODE Processing Pipeline 0475c8ece241493ee58b831f47024c01 https://www.encodeproject.org/files/ENCFF363OIC/@@download/ENCFF363OIC.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF650GZO bed narrowPeak optimal idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF216MKT, ENCFF281QDR, ENCFF795KPL 346921 ENCODE Processing Pipeline de965e0f3921297c8f2d5541c4be4f57 https://www.encodeproject.org/files/ENCFF650GZO/@@download/ENCFF650GZO.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF845WJG bed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF253FOO 5635215 ENCODE Processing Pipeline 16062f34ba951e7ee5de07a62c2eb7ae https://www.encodeproject.org/files/ENCFF845WJG/@@download/ENCFF845WJG.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF047CHD bigBed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF363OIC 10391440 ENCODE Processing Pipeline 1ad5845c9d4647ba9f8517bc8913a139 https://www.encodeproject.org/files/ENCFF047CHD/@@download/ENCFF047CHD.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF216MKT bed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF025UDZ, ENCFF080EVD, ENCFF428FLU, ENCFF470EPV 6356522 ENCODE Processing Pipeline 8fa0382910a77ce3761f12322528dcf7 https://www.encodeproject.org/files/ENCFF216MKT/@@download/ENCFF216MKT.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF045SLE bigBed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF795KPL 10385751 ENCODE Processing Pipeline 78379832b7d052163b4690218cefbac7 https://www.encodeproject.org/files/ENCFF045SLE/@@download/ENCFF045SLE.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF337VNM bed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF118ENS, ENCFF253FOO, ENCFF383VZK, ENCFF538TLU 6289560 ENCODE Processing Pipeline 314adc08226e942176e75801586f1370 https://www.encodeproject.org/files/ENCFF337VNM/@@download/ENCFF337VNM.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF281QDR bed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF080EVD, ENCFF428FLU 5627741 ENCODE Processing Pipeline 6e21c822da38e7b264a767b034f30d3a https://www.encodeproject.org/files/ENCFF281QDR/@@download/ENCFF281QDR.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF795KPL bed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF025UDZ, ENCFF470EPV 4079696 ENCODE Processing Pipeline a90773fd5fe8725ab93d8f966116e4a4 https://www.encodeproject.org/files/ENCFF795KPL/@@download/ENCFF795KPL.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF748DPS bigBed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF845WJG 13054251 ENCODE Processing Pipeline f753fafe10a7f4a0cc8301d09205c977 https://www.encodeproject.org/files/ENCFF748DPS/@@download/ENCFF748DPS.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF520DSB bigBed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF281QDR 13046237 ENCODE Processing Pipeline bdae11cd691ed1c712731d9d35844cfb https://www.encodeproject.org/files/ENCFF520DSB/@@download/ENCFF520DSB.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF010ZAC bigBed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF337VNM 13275358 ENCODE Processing Pipeline 8f4b041740bf09d747445c222e49ac89 https://www.encodeproject.org/files/ENCFF010ZAC/@@download/ENCFF010ZAC.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF600VDZ bed narrowPeak conservative idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF337VNM, ENCFF363OIC, ENCFF419RSJ, ENCFF845WJG 215161 ENCODE Processing Pipeline 55043020d3f080edc3ac92ab8e188604 https://www.encodeproject.org/files/ENCFF600VDZ/@@download/ENCFF600VDZ.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF266MZL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF600VDZ 432842 ENCODE Processing Pipeline c237364f3c9cf247896d531288376920 https://www.encodeproject.org/files/ENCFF266MZL/@@download/ENCFF266MZL.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF840IIP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF650GZO 608217 ENCODE Processing Pipeline 3c57a48898a678d61522616109a0a29d https://www.encodeproject.org/files/ENCFF840IIP/@@download/ENCFF840IIP.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF663RUS bed narrowPeak optimal idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF337VNM, ENCFF363OIC, ENCFF419RSJ, ENCFF845WJG 339374 ENCODE Processing Pipeline 41b088e897a44a1ba0b7402fe875d6cd https://www.encodeproject.org/files/ENCFF663RUS/@@download/ENCFF663RUS.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF142YLC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF663RUS 598167 ENCODE Processing Pipeline b7c5c586babef3bf445dcac68a81c1b7 https://www.encodeproject.org/files/ENCFF142YLC/@@download/ENCFF142YLC.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF196JLY bed narrowPeak conservative idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF216MKT, ENCFF281QDR, ENCFF795KPL 214070 ENCODE Processing Pipeline 2bdb5327ff520e77bffffd6b83eabae1 https://www.encodeproject.org/files/ENCFF196JLY/@@download/ENCFF196JLY.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF759MRS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF196JLY 430248 ENCODE Processing Pipeline bdcfe4c272359c4b8cdcc503194a884b https://www.encodeproject.org/files/ENCFF759MRS/@@download/ENCFF759MRS.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF331QDW bigBed narrowPeak peaks ENCSR000BPB ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF216MKT 13294135 ENCODE Processing Pipeline e05b43e9e99baca942b393d5b0f4b66a https://www.encodeproject.org/files/ENCFF331QDW/@@download/ENCFF331QDW.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking ENCFF545DFQ fastq reads ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 1 50 single-ended 1475733965 Richard Myers, HAIB 912c3c24a9efe43a7107d9131134a2fe SRA:SRR5339279 https://www.encodeproject.org/files/ENCFF545DFQ/@@download/ENCFF545DFQ.fastq.gz HiSeq 2000 /files/ENCFF993VKM/ released antibody characterized with exemption ENCFF855OMG fastq reads ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 1 50 single-ended 1520743272 Richard Myers, HAIB 8004fe1d2de34c029d64ef985dcfaccf SRA:SRR5339278 https://www.encodeproject.org/files/ENCFF855OMG/@@download/ENCFF855OMG.fastq.gz HiSeq 2000 /files/ENCFF913JVQ/ released antibody characterized with exemption ENCFF596ABH bam unfiltered alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 50 ENCFF807MUK, ENCFF855OMG 1631253039 ENCODE Processing Pipeline 871c8bc8bce169f2a1e92633e49d25bd https://www.encodeproject.org/files/ENCFF596ABH/@@download/ENCFF596ABH.bam hg19 released antibody characterized with exemption ENCFF640OUB bam unfiltered alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 50 ENCFF545DFQ, ENCFF643CGH 1661317887 ENCODE Processing Pipeline 7a64d16e4437d97bfdf116ebd0c69e66 https://www.encodeproject.org/files/ENCFF640OUB/@@download/ENCFF640OUB.bam GRCh38 released antibody characterized with exemption ENCFF995SRK bam unfiltered alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 50 ENCFF545DFQ, ENCFF807MUK 1654893433 ENCODE Processing Pipeline 2783e433c0e44facf10c6dc24e8df9ca https://www.encodeproject.org/files/ENCFF995SRK/@@download/ENCFF995SRK.bam hg19 released antibody characterized with exemption ENCFF228FGR bam unfiltered alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 50 ENCFF643CGH, ENCFF855OMG 1636782812 ENCODE Processing Pipeline 27a2f733fc5e3af45983fe27e513430f https://www.encodeproject.org/files/ENCFF228FGR/@@download/ENCFF228FGR.bam GRCh38 released antibody characterized with exemption ENCFF749LRJ bam alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 50 ENCFF545DFQ, ENCFF643CGH 1257666090 ENCODE Processing Pipeline 46bdf485f39dabc7d78d1ee7ae134dd9 https://www.encodeproject.org/files/ENCFF749LRJ/@@download/ENCFF749LRJ.bam GRCh38 released antibody characterized with exemption ENCFF354IGM bam alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 50 ENCFF807MUK, ENCFF855OMG 1231149238 ENCODE Processing Pipeline d31533ad89e812751fa92dd1abdda1f4 https://www.encodeproject.org/files/ENCFF354IGM/@@download/ENCFF354IGM.bam hg19 released antibody characterized with exemption ENCFF356PMF bam alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 50 ENCFF545DFQ, ENCFF807MUK 1258158493 ENCODE Processing Pipeline 81b887684115ee16d2be154af102071d https://www.encodeproject.org/files/ENCFF356PMF/@@download/ENCFF356PMF.bam hg19 released antibody characterized with exemption ENCFF408TSG bam alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 50 ENCFF643CGH, ENCFF855OMG 1230585502 ENCODE Processing Pipeline 2c5fa36d486b3f941a09551cc95b8c7c https://www.encodeproject.org/files/ENCFF408TSG/@@download/ENCFF408TSG.bam GRCh38 released antibody characterized with exemption ENCFF373FDW bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF354IGM, ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 6696113 ENCODE Processing Pipeline 255615d0001ae16e53d98f85676ca8cc https://www.encodeproject.org/files/ENCFF373FDW/@@download/ENCFF373FDW.bed.gz hg19 released antibody characterized with exemption ENCFF962PLB bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF354IGM, ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 1195920673 ENCODE Processing Pipeline e732c6173f4cd6670c33513534b1e9a4 https://www.encodeproject.org/files/ENCFF962PLB/@@download/ENCFF962PLB.bigWig hg19 released antibody characterized with exemption ENCFF898RYD bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF354IGM, ENCFF444TNY, ENCFF847YDJ 932163904 ENCODE Processing Pipeline a1dd7d00f737407c72cd9efebfa4bac3 https://www.encodeproject.org/files/ENCFF898RYD/@@download/ENCFF898RYD.bigWig hg19 released antibody characterized with exemption ENCFF052NYE bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 1083190001 ENCODE Processing Pipeline 1a00eda9b7da759c6a48635222b1c781 https://www.encodeproject.org/files/ENCFF052NYE/@@download/ENCFF052NYE.bigWig hg19 released antibody characterized with exemption ENCFF370VGF bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF354IGM, ENCFF444TNY, ENCFF847YDJ 746633169 ENCODE Processing Pipeline 78365e45687f322c91353df4873899ac https://www.encodeproject.org/files/ENCFF370VGF/@@download/ENCFF370VGF.bigWig hg19 released antibody characterized with exemption ENCFF844HBQ bed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF001TDO, ENCFF077SAE, ENCFF373FDW, ENCFF939WYL 312304 ENCODE Processing Pipeline b304df9dcf031ea1956760833ad45da5 https://www.encodeproject.org/files/ENCFF844HBQ/@@download/ENCFF844HBQ.bed.gz hg19 released antibody characterized with exemption ENCFF161TZI bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF354IGM, ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 1237402083 ENCODE Processing Pipeline 3d4e1fcef09a19938bca5894a677ed1d https://www.encodeproject.org/files/ENCFF161TZI/@@download/ENCFF161TZI.bigWig hg19 released antibody characterized with exemption ENCFF077SAE bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 6051932 ENCODE Processing Pipeline dede322ac318214dd1b720b562e528c6 https://www.encodeproject.org/files/ENCFF077SAE/@@download/ENCFF077SAE.bed.gz hg19 released antibody characterized with exemption ENCFF135CVS bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF373FDW 13708298 ENCODE Processing Pipeline 7b1cda334714ae509bcb289a87f3198a https://www.encodeproject.org/files/ENCFF135CVS/@@download/ENCFF135CVS.bigBed hg19 released antibody characterized with exemption ENCFF958PWG bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 843297666 ENCODE Processing Pipeline cdfbf5b3492ed7811bc4765181545fc8 https://www.encodeproject.org/files/ENCFF958PWG/@@download/ENCFF958PWG.bigWig hg19 released antibody characterized with exemption ENCFF163FGN bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF939WYL 11465874 ENCODE Processing Pipeline d3e989e5c10e131933edcf99dd890208 https://www.encodeproject.org/files/ENCFF163FGN/@@download/ENCFF163FGN.bigBed hg19 released antibody characterized with exemption ENCFF912KUK bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF077SAE 11421824 ENCODE Processing Pipeline d4360b89ce701f6376574ae195b1129b https://www.encodeproject.org/files/ENCFF912KUK/@@download/ENCFF912KUK.bigBed hg19 released antibody characterized with exemption ENCFF986JLG bigBed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF063BGI 540888 ENCODE Processing Pipeline a93335adafbf990ed1f33ef09cc59c11 https://www.encodeproject.org/files/ENCFF986JLG/@@download/ENCFF986JLG.bigBed hg19 released antibody characterized with exemption ENCFF016MFS bigBed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF844HBQ 584805 ENCODE Processing Pipeline c3c8479c5cf32538c1207ef353c7bf6a https://www.encodeproject.org/files/ENCFF016MFS/@@download/ENCFF016MFS.bigBed hg19 released antibody characterized with exemption ENCFF939WYL bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF354IGM, ENCFF444TNY, ENCFF847YDJ 6086390 ENCODE Processing Pipeline d487c96986116ccb87b786d9ddfd69c7 https://www.encodeproject.org/files/ENCFF939WYL/@@download/ENCFF939WYL.bed.gz hg19 released antibody characterized with exemption ENCFF063BGI bed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF001TDO, ENCFF077SAE, ENCFF373FDW, ENCFF939WYL 279830 ENCODE Processing Pipeline 05c50ae41a8b131604292e1cbca9838d https://www.encodeproject.org/files/ENCFF063BGI/@@download/ENCFF063BGI.bed.gz hg19 released antibody characterized with exemption ENCFF601WHJ bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG 940130062 ENCODE Processing Pipeline b787691939840bb568660d9dbeed1a58 https://www.encodeproject.org/files/ENCFF601WHJ/@@download/ENCFF601WHJ.bigWig GRCh38 released antibody characterized with exemption ENCFF720CZD bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF749LRJ 947115561 ENCODE Processing Pipeline 01dce0ffb04930967f100b4613f9a1dd https://www.encodeproject.org/files/ENCFF720CZD/@@download/ENCFF720CZD.bigWig GRCh38 released antibody characterized with exemption ENCFF237STA bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG, ENCFF749LRJ 1234643491 ENCODE Processing Pipeline b1bfc6b921ca4f2c85979b6c8eabc0c4 https://www.encodeproject.org/files/ENCFF237STA/@@download/ENCFF237STA.bigWig GRCh38 released antibody characterized with exemption ENCFF834NIU bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG 761376638 ENCODE Processing Pipeline c058b09b9b3a46826bf8ad83a8d40082 https://www.encodeproject.org/files/ENCFF834NIU/@@download/ENCFF834NIU.bigWig GRCh38 released antibody characterized with exemption ENCFF127LEK bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF749LRJ 838156251 ENCODE Processing Pipeline b310faf45852fafc51ba848844de2e1f https://www.encodeproject.org/files/ENCFF127LEK/@@download/ENCFF127LEK.bigWig GRCh38 released antibody characterized with exemption ENCFF845AHN bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG, ENCFF749LRJ 1240301089 ENCODE Processing Pipeline 8777c9e4b09028749ed72c6c0950345b https://www.encodeproject.org/files/ENCFF845AHN/@@download/ENCFF845AHN.bigWig GRCh38 released antibody characterized with exemption ENCFF298RGN bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG, ENCFF749LRJ 6551750 ENCODE Processing Pipeline 59b5c167384b9b8df5ffd6ca20a2e722 https://www.encodeproject.org/files/ENCFF298RGN/@@download/ENCFF298RGN.bed.gz GRCh38 released antibody characterized with exemption ENCFF576FKD bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG 5898968 ENCODE Processing Pipeline 12f62e333fe9f0f6f20cfe7c040ac0c7 https://www.encodeproject.org/files/ENCFF576FKD/@@download/ENCFF576FKD.bed.gz GRCh38 released antibody characterized with exemption ENCFF379LKE bed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF298RGN, ENCFF419RSJ, ENCFF576FKD, ENCFF601FGL 310263 ENCODE Processing Pipeline 933a765031fc18c258b3ed9ebf3c4866 https://www.encodeproject.org/files/ENCFF379LKE/@@download/ENCFF379LKE.bed.gz GRCh38 released antibody characterized with exemption ENCFF601FGL bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF749LRJ 5961921 ENCODE Processing Pipeline f31122c313780f824795c80a6e5304b9 https://www.encodeproject.org/files/ENCFF601FGL/@@download/ENCFF601FGL.bed.gz GRCh38 released antibody characterized with exemption ENCFF013GMQ bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF576FKD 11445683 ENCODE Processing Pipeline 93cc8ec8030e9231e937939f53b8e75f https://www.encodeproject.org/files/ENCFF013GMQ/@@download/ENCFF013GMQ.bigBed GRCh38 released antibody characterized with exemption ENCFF432FCA bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF601FGL 11441601 ENCODE Processing Pipeline dfa6da6a36657673944429fb877137ce https://www.encodeproject.org/files/ENCFF432FCA/@@download/ENCFF432FCA.bigBed GRCh38 released antibody characterized with exemption ENCFF882NVQ bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF298RGN 13712102 ENCODE Processing Pipeline 62e5fbc55b18fce09a71fd4e30e6e0df https://www.encodeproject.org/files/ENCFF882NVQ/@@download/ENCFF882NVQ.bigBed GRCh38 released antibody characterized with exemption ENCFF512PBA bed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF298RGN, ENCFF419RSJ, ENCFF576FKD, ENCFF601FGL 283889 ENCODE Processing Pipeline 07a616f9dbdfaa1d5c7a2f9886e2b00f https://www.encodeproject.org/files/ENCFF512PBA/@@download/ENCFF512PBA.bed.gz GRCh38 released antibody characterized with exemption ENCFF589PMC bigBed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF379LKE 584493 ENCODE Processing Pipeline 1964ae98490573f6f5578426d8703fa4 https://www.encodeproject.org/files/ENCFF589PMC/@@download/ENCFF589PMC.bigBed GRCh38 released antibody characterized with exemption ENCFF924OOV bigBed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF512PBA 547663 ENCODE Processing Pipeline 6614125cb3b29cdf283d274a5f51d606 https://www.encodeproject.org/files/ENCFF924OOV/@@download/ENCFF924OOV.bigBed GRCh38 released antibody characterized with exemption ENCFF000PNN bigBed broadPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHG 1403417 Richard Myers, HAIB ed89468dcd93d42944d4026dea0ac096 https://www.encodeproject.org/files/ENCFF000PNN/@@download/ENCFF000PNN.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PNO bigBed broadPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHH 1157642 Richard Myers, HAIB 386efa18ebd25006049e027175f07b98 https://www.encodeproject.org/files/ENCFF000PNO/@@download/ENCFF000PNO.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PNP bam alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PNW 1031489285 Richard Myers, HAIB b1b7e8b2e580cfeac7846fef16df0984 https://www.encodeproject.org/files/ENCFF000PNP/@@download/ENCFF000PNP.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PNQ bam alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PNY 1121831716 Richard Myers, HAIB b8ae7b37dcc0958d5203f9a999b50c16 https://www.encodeproject.org/files/ENCFF000PNQ/@@download/ENCFF000PNQ.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PNR bigWig raw signal ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 58671030 Richard Myers, HAIB 2c82ea025b86ecdcb47b7d77f16bf57b https://www.encodeproject.org/files/ENCFF000PNR/@@download/ENCFF000PNR.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PNS bigWig raw signal ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 47233859 Richard Myers, HAIB 1c141698d074844d9815198b66abcc06 https://www.encodeproject.org/files/ENCFF000PNS/@@download/ENCFF000PNS.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PNW fastq reads ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1020915050 Richard Myers, HAIB 244eec41da012ebf76013155af5f1c05 https://www.encodeproject.org/files/ENCFF000PNW/@@download/ENCFF000PNW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PNY fastq reads ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1020962697 Richard Myers, HAIB 5365466439935974b41b78173bedfaf6 https://www.encodeproject.org/files/ENCFF000PNY/@@download/ENCFF000PNY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UHG bed broadPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 925908 Richard Myers, HAIB c9da89f019c87b017506c2ff857c3ae6 https://www.encodeproject.org/files/ENCFF001UHG/@@download/ENCFF001UHG.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UHH bed broadPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 775540 Richard Myers, HAIB e8c47f26d214c45bcedd51737d8bf1a0 https://www.encodeproject.org/files/ENCFF001UHH/@@download/ENCFF001UHH.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CKY bed narrowPeak optimal idr thresholded peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1262235 ENCODE Consortium Analysis Working Group 78cc5c13e7d3c26e1d83abdcaea59804 https://www.encodeproject.org/files/ENCFF002CKY/@@download/ENCFF002CKY.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF873WDR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE ENCFF002CKY 2615667 ENCODE Consortium 19f03a7fe1f18b9e895195ca476e58dd https://www.encodeproject.org/files/ENCFF873WDR/@@download/ENCFF873WDR.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF713OAW bam unfiltered alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PNW, ENCFF643CGH 1254597350 ENCODE Processing Pipeline 989bede75355ec594e2eaccb0b4f7e2d https://www.encodeproject.org/files/ENCFF713OAW/@@download/ENCFF713OAW.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF185SAW bam alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PNW, ENCFF643CGH 655572924 ENCODE Processing Pipeline f363e85f6efd27fc979241ad64bf54e1 https://www.encodeproject.org/files/ENCFF185SAW/@@download/ENCFF185SAW.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF918IEO bam unfiltered alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNY, ENCFF643CGH 1314423622 ENCODE Processing Pipeline ae30541baa65794b5659f54f14baa549 https://www.encodeproject.org/files/ENCFF918IEO/@@download/ENCFF918IEO.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF140VTG bam alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNY, ENCFF643CGH 756551127 ENCODE Processing Pipeline 884ab40b7a624235a7024c7c89b6caae https://www.encodeproject.org/files/ENCFF140VTG/@@download/ENCFF140VTG.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF218VYQ bam unfiltered alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNY, ENCFF807MUK 1310602259 ENCODE Processing Pipeline 6aefbbc57de102d8b48653942f8e029e https://www.encodeproject.org/files/ENCFF218VYQ/@@download/ENCFF218VYQ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF514GQU bam alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PNY, ENCFF807MUK 756814153 ENCODE Processing Pipeline 7c1055129961c02cac0e4167ccaa7abd https://www.encodeproject.org/files/ENCFF514GQU/@@download/ENCFF514GQU.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF875DVJ bam unfiltered alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PNW, ENCFF807MUK 1251311420 ENCODE Processing Pipeline ef5c4454767dcda0ebf242080fb026df https://www.encodeproject.org/files/ENCFF875DVJ/@@download/ENCFF875DVJ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF977AXY bam alignments ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PNW, ENCFF807MUK 655914006 ENCODE Processing Pipeline 6c53651177f60ce4793e3d344fc46617 https://www.encodeproject.org/files/ENCFF977AXY/@@download/ENCFF977AXY.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF113AZK bigWig signal p-value ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140VTG, ENCFF185SAW, ENCFF285LVE 557338446 ENCODE Processing Pipeline 91cd56e8387fae3f83d13e2d7bcbbdd0 https://www.encodeproject.org/files/ENCFF113AZK/@@download/ENCFF113AZK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF378QKC bigWig signal p-value ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF185SAW, ENCFF285LVE 437579199 ENCODE Processing Pipeline f67d0037e88e433d519b3e13c42aff31 https://www.encodeproject.org/files/ENCFF378QKC/@@download/ENCFF378QKC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF470VYV bigWig signal p-value ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140VTG, ENCFF285LVE 422523700 ENCODE Processing Pipeline 6aadee0d545076f9431661037312523a https://www.encodeproject.org/files/ENCFF470VYV/@@download/ENCFF470VYV.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF363QAT bigWig fold change over control ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140VTG, ENCFF285LVE 397386982 ENCODE Processing Pipeline c01589b188f5329bd351114bee0bb8f6 https://www.encodeproject.org/files/ENCFF363QAT/@@download/ENCFF363QAT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF308AJB bed narrowPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF185SAW, ENCFF285LVE 5059618 ENCODE Processing Pipeline 323f77678f37fc6534eee42a3efd0fcb https://www.encodeproject.org/files/ENCFF308AJB/@@download/ENCFF308AJB.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF871PVZ bigWig fold change over control ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140VTG, ENCFF185SAW, ENCFF285LVE 603041778 ENCODE Processing Pipeline 61e158a4c6e2f4aea606676e54d7fe45 https://www.encodeproject.org/files/ENCFF871PVZ/@@download/ENCFF871PVZ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF802GHT bigWig fold change over control ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF185SAW, ENCFF285LVE 321134967 ENCODE Processing Pipeline 503a81b7a39a47ee00db0436cb013ea1 https://www.encodeproject.org/files/ENCFF802GHT/@@download/ENCFF802GHT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF120TCG bigBed narrowPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308AJB 11229311 ENCODE Processing Pipeline 0dd85d268ab3419a790f122737337b34 https://www.encodeproject.org/files/ENCFF120TCG/@@download/ENCFF120TCG.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF056ARK bed narrowPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140VTG, ENCFF285LVE 5016910 ENCODE Processing Pipeline 9b3573603795e6175b22a6cc1be68979 https://www.encodeproject.org/files/ENCFF056ARK/@@download/ENCFF056ARK.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF288ELU bigBed narrowPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF056ARK 11196713 ENCODE Processing Pipeline fbe19468ff686e106b042db635b2ebf5 https://www.encodeproject.org/files/ENCFF288ELU/@@download/ENCFF288ELU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF874VFZ bed narrowPeak optimal idr thresholded peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF056ARK, ENCFF308AJB, ENCFF419RSJ, ENCFF516YLJ 951570 ENCODE Processing Pipeline 97e393a907713ba35600e4362e84aac4 https://www.encodeproject.org/files/ENCFF874VFZ/@@download/ENCFF874VFZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF516YLJ bed narrowPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140VTG, ENCFF185SAW, ENCFF285LVE 5499834 ENCODE Processing Pipeline 05e11f9c8473b33f0708f6414f4828d9 https://www.encodeproject.org/files/ENCFF516YLJ/@@download/ENCFF516YLJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF231IVZ bigBed narrowPeak peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF516YLJ 11498950 ENCODE Processing Pipeline 2b19dc661adaa3f7586a7c550826598b https://www.encodeproject.org/files/ENCFF231IVZ/@@download/ENCFF231IVZ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF256RAN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF874VFZ 1658479 ENCODE Processing Pipeline e71983a06d67a2978e50bc8defa138ae https://www.encodeproject.org/files/ENCFF256RAN/@@download/ENCFF256RAN.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF671FGG bed narrowPeak conservative idr thresholded peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF056ARK, ENCFF308AJB, ENCFF419RSJ, ENCFF516YLJ 863848 ENCODE Processing Pipeline 11a51986405d07790bb18e1f9fd23fb2 https://www.encodeproject.org/files/ENCFF671FGG/@@download/ENCFF671FGG.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF670MDR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF671FGG 1542767 ENCODE Processing Pipeline e2d577c9a2df23f2f974a070334c392e https://www.encodeproject.org/files/ENCFF670MDR/@@download/ENCFF670MDR.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OBV bam alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OCE 491135724 Richard Myers, HAIB cb4fed94e02be4ca34824de0f51baa42 https://www.encodeproject.org/files/ENCFF000OBV/@@download/ENCFF000OBV.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OBX bigBed broadPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TYQ 976445 Richard Myers, HAIB 682160161c51dfd5f78d95bcbf87258a https://www.encodeproject.org/files/ENCFF000OBX/@@download/ENCFF000OBX.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OBZ bigBed broadPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TYR 1134791 Richard Myers, HAIB 75682dd0ab6d2f84a1b2af3c1e0797d6 https://www.encodeproject.org/files/ENCFF000OBZ/@@download/ENCFF000OBZ.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OCA bigWig raw signal ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 21962074 Richard Myers, HAIB 516e956e299d581a268df29f877fcb39 https://www.encodeproject.org/files/ENCFF000OCA/@@download/ENCFF000OCA.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OCB bam alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OCH 882962705 Richard Myers, HAIB ef6427f2b417c38f4d6f1013206e758e https://www.encodeproject.org/files/ENCFF000OCB/@@download/ENCFF000OCB.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OCC bigWig raw signal ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 43332415 Richard Myers, HAIB a25912db3e4d82aac8350073b91ed74f https://www.encodeproject.org/files/ENCFF000OCC/@@download/ENCFF000OCC.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OCE fastq reads ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 478254246 Richard Myers, HAIB f721fbd5213b3a111ee3940e5736dae5 https://www.encodeproject.org/files/ENCFF000OCE/@@download/ENCFF000OCE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OCH fastq reads ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 993852975 Richard Myers, HAIB 7153b0488cbded3d235bf976f5bb9100 https://www.encodeproject.org/files/ENCFF000OCH/@@download/ENCFF000OCH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001TYQ bed broadPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 522149 Richard Myers, HAIB 1b1302d96ffb5c871b8c48b66a939c65 https://www.encodeproject.org/files/ENCFF001TYQ/@@download/ENCFF001TYQ.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001TYR bed broadPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 674566 Richard Myers, HAIB 531034b4d4c60f1341b804418f7b2b3a https://www.encodeproject.org/files/ENCFF001TYR/@@download/ENCFF001TYR.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CHR bed narrowPeak optimal idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 784543 ENCODE Consortium Analysis Working Group 7ddac173d34f70fa26a89f569581c19f https://www.encodeproject.org/files/ENCFF002CHR/@@download/ENCFF002CHR.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF869VMU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE ENCFF002CHR 1493578 ENCODE Consortium 06cc25098f4286c992b7235b8fa33f95 https://www.encodeproject.org/files/ENCFF869VMU/@@download/ENCFF869VMU.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF901DWV bam unfiltered alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OCE, ENCFF643CGH 582410225 ENCODE Processing Pipeline c15b23e1fb76e8f1a93a1ac262617d6e https://www.encodeproject.org/files/ENCFF901DWV/@@download/ENCFF901DWV.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF545ETC bam alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OCE, ENCFF643CGH 342142700 ENCODE Processing Pipeline 707837ef99d6cd7ef46216bf4cf79a6b https://www.encodeproject.org/files/ENCFF545ETC/@@download/ENCFF545ETC.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF175RHE bam unfiltered alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OCH, ENCFF643CGH 1077232191 ENCODE Processing Pipeline 8f2aeec646a58c785352418914dcd0e5 https://www.encodeproject.org/files/ENCFF175RHE/@@download/ENCFF175RHE.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF310ZIS bam alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OCH, ENCFF643CGH 468026801 ENCODE Processing Pipeline 6d646037df94f8378c442cf792bda946 https://www.encodeproject.org/files/ENCFF310ZIS/@@download/ENCFF310ZIS.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF401LTK bam unfiltered alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OCE, ENCFF807MUK 581299426 ENCODE Processing Pipeline 38048145e66ce63f7e9eb889e6f835d2 https://www.encodeproject.org/files/ENCFF401LTK/@@download/ENCFF401LTK.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF311CJK bam alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OCE, ENCFF807MUK 340589424 ENCODE Processing Pipeline 9405e20e9a0ca9e5f313300b0bdcde8d https://www.encodeproject.org/files/ENCFF311CJK/@@download/ENCFF311CJK.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF448FSM bam unfiltered alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OCH, ENCFF807MUK 1076389205 ENCODE Processing Pipeline f468c96fe93f93560bd8de62c2c6ef1e https://www.encodeproject.org/files/ENCFF448FSM/@@download/ENCFF448FSM.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF800DLO bam alignments ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OCH, ENCFF807MUK 465654843 ENCODE Processing Pipeline 9d77563737166da7a7c9e2ccf22fd823 https://www.encodeproject.org/files/ENCFF800DLO/@@download/ENCFF800DLO.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF092ZWW bigWig signal p-value ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF545ETC 327016245 ENCODE Processing Pipeline b6d2bfebb0f7dea84bee203678092029 https://www.encodeproject.org/files/ENCFF092ZWW/@@download/ENCFF092ZWW.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF916YVI bigWig fold change over control ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310ZIS, ENCFF488YYE, ENCFF545ETC 366642757 ENCODE Processing Pipeline 33e1d20d32fcc70acecef3a0ff3d9e8c https://www.encodeproject.org/files/ENCFF916YVI/@@download/ENCFF916YVI.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF821OON bigWig signal p-value ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310ZIS, ENCFF488YYE, ENCFF545ETC 414493589 ENCODE Processing Pipeline 45f54939ec75d1809fc8472d82da40aa https://www.encodeproject.org/files/ENCFF821OON/@@download/ENCFF821OON.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF646BYO bigWig signal p-value ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310ZIS, ENCFF488YYE 447336137 ENCODE Processing Pipeline 9ddc7345e52e73823ae4e3051e5a34cb https://www.encodeproject.org/files/ENCFF646BYO/@@download/ENCFF646BYO.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF564SXM bigWig fold change over control ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310ZIS, ENCFF488YYE 226089649 ENCODE Processing Pipeline db6daacc9f706c138062e26e0f498d43 https://www.encodeproject.org/files/ENCFF564SXM/@@download/ENCFF564SXM.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF216MIT bigWig fold change over control ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF545ETC 180915789 ENCODE Processing Pipeline 46d2db492203cfc4d4ec295cd8b984bf https://www.encodeproject.org/files/ENCFF216MIT/@@download/ENCFF216MIT.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF104UCF bed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF545ETC 3264851 ENCODE Processing Pipeline 4a09e046119b52143964c55b73e10caa https://www.encodeproject.org/files/ENCFF104UCF/@@download/ENCFF104UCF.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF919VUH bed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310ZIS, ENCFF488YYE, ENCFF545ETC 4726848 ENCODE Processing Pipeline eb17606be848d53688b8343fb22be510 https://www.encodeproject.org/files/ENCFF919VUH/@@download/ENCFF919VUH.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF861OTX bigBed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF104UCF 6743274 ENCODE Processing Pipeline 04a5283a5452276160668db67c640a4f https://www.encodeproject.org/files/ENCFF861OTX/@@download/ENCFF861OTX.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF218RRQ bigBed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF919VUH 11080610 ENCODE Processing Pipeline 870d53302c2199037ed16b8e5c578944 https://www.encodeproject.org/files/ENCFF218RRQ/@@download/ENCFF218RRQ.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF618UTS bed narrowPeak conservative idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF104UCF, ENCFF215WDM, ENCFF419RSJ, ENCFF919VUH 610915 ENCODE Processing Pipeline 965bd5eae31bc762b487e026a562db94 https://www.encodeproject.org/files/ENCFF618UTS/@@download/ENCFF618UTS.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF215WDM bed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310ZIS, ENCFF488YYE 4399797 ENCODE Processing Pipeline e6a241eb0e61aeebff1f545877b732c8 https://www.encodeproject.org/files/ENCFF215WDM/@@download/ENCFF215WDM.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF330PYA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF618UTS 946806 ENCODE Processing Pipeline 4486c5402c973b9f488907f836db76fc https://www.encodeproject.org/files/ENCFF330PYA/@@download/ENCFF330PYA.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF624PCO bigBed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF215WDM 10524340 ENCODE Processing Pipeline 93a566903b255f5dd664a0a5b3329640 https://www.encodeproject.org/files/ENCFF624PCO/@@download/ENCFF624PCO.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF654EGO bed narrowPeak optimal idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF104UCF, ENCFF215WDM, ENCFF419RSJ, ENCFF919VUH 685326 ENCODE Processing Pipeline 8217bae3a169d4081aa3697ad7b5786d https://www.encodeproject.org/files/ENCFF654EGO/@@download/ENCFF654EGO.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF867VSB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF654EGO 1319442 ENCODE Processing Pipeline 7aaf570fd287ec2167b8a00457da4a23 https://www.encodeproject.org/files/ENCFF867VSB/@@download/ENCFF867VSB.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF550QIX bigWig fold change over control ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF311CJK, ENCFF963CVB 180533142 ENCODE Processing Pipeline a8310cde1fd2cf272ddd9bcce7382eae https://www.encodeproject.org/files/ENCFF550QIX/@@download/ENCFF550QIX.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF756HRE bed narrowPeak conservative idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF436OWU, ENCFF510UIU, ENCFF601GLM 611088 ENCODE Processing Pipeline 96cfd0fdf4679678cc42c814594c6c39 https://www.encodeproject.org/files/ENCFF756HRE/@@download/ENCFF756HRE.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF312ZNA bigWig signal p-value ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF311CJK, ENCFF963CVB 341316341 ENCODE Processing Pipeline 493540e4ea84767aef9cea76a99145dd https://www.encodeproject.org/files/ENCFF312ZNA/@@download/ENCFF312ZNA.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF523HMT bigWig signal p-value ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF800DLO, ENCFF963CVB 381037194 ENCODE Processing Pipeline c474655407124541515aa9248d6cbc41 https://www.encodeproject.org/files/ENCFF523HMT/@@download/ENCFF523HMT.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF416LQD bigWig signal p-value ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF311CJK, ENCFF800DLO, ENCFF963CVB 472488228 ENCODE Processing Pipeline a680137948d9b4c21b57afc8bbd1d04d https://www.encodeproject.org/files/ENCFF416LQD/@@download/ENCFF416LQD.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF582DAX bigWig fold change over control ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF800DLO, ENCFF963CVB 227357584 ENCODE Processing Pipeline 1f80d212cca1d6281701fd488b3cd560 https://www.encodeproject.org/files/ENCFF582DAX/@@download/ENCFF582DAX.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF567EGK bigWig fold change over control ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF311CJK, ENCFF800DLO, ENCFF963CVB 365022624 ENCODE Processing Pipeline 0d42354e6a29a32a1b848ce67c3756b7 https://www.encodeproject.org/files/ENCFF567EGK/@@download/ENCFF567EGK.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF510UIU bed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF311CJK, ENCFF963CVB 3261181 ENCODE Processing Pipeline cf4faead6c6f80b199f1a699ec3d60c0 https://www.encodeproject.org/files/ENCFF510UIU/@@download/ENCFF510UIU.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF436OWU bed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF800DLO, ENCFF963CVB 4403785 ENCODE Processing Pipeline a895db5e73e2acf0e8b09774027faccb https://www.encodeproject.org/files/ENCFF436OWU/@@download/ENCFF436OWU.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF601GLM bed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF311CJK, ENCFF800DLO, ENCFF963CVB 4726086 ENCODE Processing Pipeline e687493a5491e033ea4e19851cecc5b1 https://www.encodeproject.org/files/ENCFF601GLM/@@download/ENCFF601GLM.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF493CET bigBed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF510UIU 6746754 ENCODE Processing Pipeline 1dd793a4aacf93b3e9bef077a7eee7bd https://www.encodeproject.org/files/ENCFF493CET/@@download/ENCFF493CET.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF532QXH bigBed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF436OWU 10531907 ENCODE Processing Pipeline 8f478daaf379f6659a076e2dbcf9fe3f https://www.encodeproject.org/files/ENCFF532QXH/@@download/ENCFF532QXH.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF170SVS bigBed narrowPeak peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF601GLM 11080106 ENCODE Processing Pipeline cae3a013430f7f4cb4830731dc7442ff https://www.encodeproject.org/files/ENCFF170SVS/@@download/ENCFF170SVS.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF891UAP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF756HRE 946618 ENCODE Processing Pipeline 1cf7d82c46c1a0fc5dfa1429f471f347 https://www.encodeproject.org/files/ENCFF891UAP/@@download/ENCFF891UAP.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF753RGL bed narrowPeak optimal idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF436OWU, ENCFF510UIU, ENCFF601GLM 688110 ENCODE Processing Pipeline c297cd9f39ea9fa917cc79632b77b70d https://www.encodeproject.org/files/ENCFF753RGL/@@download/ENCFF753RGL.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF584PFC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMY ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF753RGL 1322975 ENCODE Processing Pipeline ca0795c98d007ce58a7a9274d93dfa8b https://www.encodeproject.org/files/ENCFF584PFC/@@download/ENCFF584PFC.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF243COH fastq reads ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF653WRQ 1662164283 Richard Myers, HAIB 9a4f54f3c07e28411f9ab626d6a6b583 https://www.encodeproject.org/files/ENCFF243COH/@@download/ENCFF243COH.fastq.gz HiSeq 2000 /files/ENCFF196GKM/ released antibody characterized with exemption experiment not submitted to GEO ENCFF653WRQ fastq reads ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF243COH 1623064384 Richard Myers, HAIB cef31a7ed58775a0220b77900542ae7d https://www.encodeproject.org/files/ENCFF653WRQ/@@download/ENCFF653WRQ.fastq.gz HiSeq 2000 /files/ENCFF040RTO/ released antibody characterized with exemption experiment not submitted to GEO ENCFF632BUI bam unfiltered alignments ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF243COH, ENCFF653WRQ, ENCFF807MUK 3908579974 ENCODE Processing Pipeline e50fe9e27a8191e9ad99d0f0229fd2ce https://www.encodeproject.org/files/ENCFF632BUI/@@download/ENCFF632BUI.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF924YJA bam alignments ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF243COH, ENCFF653WRQ, ENCFF807MUK 2805422755 ENCODE Processing Pipeline 7a93817ed05cfd2eeacdcde73d55df4c https://www.encodeproject.org/files/ENCFF924YJA/@@download/ENCFF924YJA.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF253XOS bam alignments ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF243COH, ENCFF643CGH, ENCFF653WRQ 2807845118 ENCODE Processing Pipeline b51abc604dc787564f2da70e4ab6abfd https://www.encodeproject.org/files/ENCFF253XOS/@@download/ENCFF253XOS.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF397YWY bam unfiltered alignments ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF243COH, ENCFF643CGH, ENCFF653WRQ 3923963341 ENCODE Processing Pipeline 7fe96f1dda54b3b7b825282f46f26e3a https://www.encodeproject.org/files/ENCFF397YWY/@@download/ENCFF397YWY.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF478HBF bigWig signal p-value ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF253XOS, ENCFF762OSU 927424710 ENCODE Processing Pipeline 5b6d9be06f3141cb391f228b9d55732c https://www.encodeproject.org/files/ENCFF478HBF/@@download/ENCFF478HBF.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF958ZSA bed narrowPeak peaks ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF253XOS, ENCFF762OSU 5979042 ENCODE Processing Pipeline 0e7640b1af5b54025eaafb9bb1abbcdc https://www.encodeproject.org/files/ENCFF958ZSA/@@download/ENCFF958ZSA.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF199GSW bigBed narrowPeak peaks ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF958ZSA 13776885 ENCODE Processing Pipeline 76cc7ef724884191f20fe358ec8b454d https://www.encodeproject.org/files/ENCFF199GSW/@@download/ENCFF199GSW.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF503UCK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF958ZSA 565328 ENCODE Processing Pipeline 5344f39ca77eb2f821f9609a0fcf5124 https://www.encodeproject.org/files/ENCFF503UCK/@@download/ENCFF503UCK.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF675WFV bigWig fold change over control ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF253XOS, ENCFF762OSU 810504463 ENCODE Processing Pipeline 4459bad73544775f1071dd9190ec5fa8 https://www.encodeproject.org/files/ENCFF675WFV/@@download/ENCFF675WFV.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF933HIR bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF503UCK 1181958 ENCODE Processing Pipeline 2911071506dcea59c7f087cbf804fb3e https://www.encodeproject.org/files/ENCFF933HIR/@@download/ENCFF933HIR.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF654MRF bed narrowPeak peaks ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF650TKO, ENCFF924YJA 5953485 ENCODE Processing Pipeline 376cf1563883a5732e3cbc0617dff618 https://www.encodeproject.org/files/ENCFF654MRF/@@download/ENCFF654MRF.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF890QBA bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF844KZH 1173235 ENCODE Processing Pipeline fb3ddde6afb85a7f22eb2ad734df63e8 https://www.encodeproject.org/files/ENCFF890QBA/@@download/ENCFF890QBA.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF475CQZ bigBed narrowPeak peaks ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF654MRF 13766629 ENCODE Processing Pipeline 94669a545f3e376ae1d66a95fb6cc412 https://www.encodeproject.org/files/ENCFF475CQZ/@@download/ENCFF475CQZ.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF502WCH bigWig fold change over control ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF650TKO, ENCFF924YJA 812162137 ENCODE Processing Pipeline 4afb1d576af836c8e2d3579fb40f638f https://www.encodeproject.org/files/ENCFF502WCH/@@download/ENCFF502WCH.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF833TFW bigWig signal p-value ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF650TKO, ENCFF924YJA 925923179 ENCODE Processing Pipeline e15792d411e0026aa98c6ccde415970d https://www.encodeproject.org/files/ENCFF833TFW/@@download/ENCFF833TFW.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF844KZH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR403USE ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF654MRF 560862 ENCODE Processing Pipeline 579922624b4c5101d3bce042d7a219e4 https://www.encodeproject.org/files/ENCFF844KZH/@@download/ENCFF844KZH.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF086PXD fastq reads ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 1 ENCFF488ULE 1669703474 Richard Myers, HAIB 3fc6a3725a395eea634a0c3f0ecbcdf7 SRA:SRR6214013 https://www.encodeproject.org/files/ENCFF086PXD/@@download/ENCFF086PXD.fastq.gz HiSeq 2000 /files/ENCFF194AYR/ released antibody characterized with exemption ENCFF488ULE fastq reads ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 2 ENCFF086PXD 1745201837 Richard Myers, HAIB bd0173809f53151000d1b298b495b0a0 SRA:SRR6214013 https://www.encodeproject.org/files/ENCFF488ULE/@@download/ENCFF488ULE.fastq.gz HiSeq 2000 /files/ENCFF844ZDM/ released antibody characterized with exemption ENCFF727MFT bam alignments ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF086PXD, ENCFF488ULE, ENCFF643CGH 2616199051 ENCODE Processing Pipeline b5100d544b945e2c5a1c7ad266c57dd9 https://www.encodeproject.org/files/ENCFF727MFT/@@download/ENCFF727MFT.bam GRCh38 released antibody characterized with exemption ENCFF883XSF bam unfiltered alignments ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF086PXD, ENCFF488ULE, ENCFF643CGH 3993691726 ENCODE Processing Pipeline 025311c73d2db529aac8185290e70f6e https://www.encodeproject.org/files/ENCFF883XSF/@@download/ENCFF883XSF.bam GRCh38 released antibody characterized with exemption ENCFF787DQG bam unfiltered alignments ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF086PXD, ENCFF488ULE, ENCFF807MUK 3981341767 ENCODE Processing Pipeline 5ed14146be347bafbe11e8bcd356e1c2 https://www.encodeproject.org/files/ENCFF787DQG/@@download/ENCFF787DQG.bam hg19 released antibody characterized with exemption ENCFF369TIE bam alignments ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF086PXD, ENCFF488ULE, ENCFF807MUK 2615920655 ENCODE Processing Pipeline bb6ee9fe1f5a41db0c881e68ca999623 https://www.encodeproject.org/files/ENCFF369TIE/@@download/ENCFF369TIE.bam hg19 released antibody characterized with exemption ENCFF996HAR bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF793QRF 1579354 ENCODE Processing Pipeline 7671ae65c1405bb1ce4c5643d99fe230 https://www.encodeproject.org/files/ENCFF996HAR/@@download/ENCFF996HAR.bigBed GRCh38 released antibody characterized with exemption ENCFF909YUJ bigWig fold change over control ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF327LUK, ENCFF727MFT 806587874 ENCODE Processing Pipeline e4b78863784cd529a5e85d99295650ca https://www.encodeproject.org/files/ENCFF909YUJ/@@download/ENCFF909YUJ.bigWig GRCh38 released antibody characterized with exemption ENCFF399PAH bigBed narrowPeak peaks ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF737WAY 13668450 ENCODE Processing Pipeline 6fff303bb7e4915f3f5cce8ac8d2bc68 https://www.encodeproject.org/files/ENCFF399PAH/@@download/ENCFF399PAH.bigBed GRCh38 released antibody characterized with exemption ENCFF507CMC bigWig signal p-value ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF327LUK, ENCFF727MFT 1061715830 ENCODE Processing Pipeline fff99e431ff7023479f1d3e114e89800 https://www.encodeproject.org/files/ENCFF507CMC/@@download/ENCFF507CMC.bigWig GRCh38 released antibody characterized with exemption ENCFF737WAY bed narrowPeak peaks ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF327LUK, ENCFF727MFT 6582089 ENCODE Processing Pipeline c556066aa39437bb1124575956388eac https://www.encodeproject.org/files/ENCFF737WAY/@@download/ENCFF737WAY.bed.gz GRCh38 released antibody characterized with exemption ENCFF793QRF bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR823FFR ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF419RSJ, ENCFF737WAY 813419 ENCODE Processing Pipeline cf60631a17110b2bc354cf50f69f181a https://www.encodeproject.org/files/ENCFF793QRF/@@download/ENCFF793QRF.bed.gz GRCh38 released antibody characterized with exemption ENCFF190IBB fastq reads ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF856IQE 2104977879 Richard Myers, HAIB 17bdc0fa6cb9690a3cdeadee19edb978 SRA:SRR6214205 https://www.encodeproject.org/files/ENCFF190IBB/@@download/ENCFF190IBB.fastq.gz HiSeq 2000 /files/ENCFF911DDV/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF856IQE fastq reads ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF190IBB 2216509818 Richard Myers, HAIB 75085bf134f772a14e876cda1d9bbf35 SRA:SRR6214205 https://www.encodeproject.org/files/ENCFF856IQE/@@download/ENCFF856IQE.fastq.gz HiSeq 2000 /files/ENCFF770NPT/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF019LKT bam unfiltered alignments ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF190IBB, ENCFF807MUK, ENCFF856IQE 4972670924 ENCODE Processing Pipeline 8fabf6d97780ced0e5fcf72152e4166a https://www.encodeproject.org/files/ENCFF019LKT/@@download/ENCFF019LKT.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF059WXP bam unfiltered alignments ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF190IBB, ENCFF643CGH, ENCFF856IQE 4989946056 ENCODE Processing Pipeline d4fbd11a9725eeacb5a4c9271344f080 https://www.encodeproject.org/files/ENCFF059WXP/@@download/ENCFF059WXP.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF489YYE bam alignments ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF190IBB, ENCFF807MUK, ENCFF856IQE 2844724386 ENCODE Processing Pipeline 7b44d353489e3ab050c9b632030bbc59 https://www.encodeproject.org/files/ENCFF489YYE/@@download/ENCFF489YYE.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF831UVV bam alignments ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF190IBB, ENCFF643CGH, ENCFF856IQE 2847394263 ENCODE Processing Pipeline 50e82d9c253c0f189a3a65ffacd782f5 https://www.encodeproject.org/files/ENCFF831UVV/@@download/ENCFF831UVV.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF225KVV bigWig fold change over control ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF831UVV 1193857253 ENCODE Processing Pipeline 61ba8e40d28b6ddae8a082000945242b https://www.encodeproject.org/files/ENCFF225KVV/@@download/ENCFF225KVV.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF675MAI bed narrowPeak peaks ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF831UVV 5394915 ENCODE Processing Pipeline 2fddb7c21a9add14a0318748d983fcdc https://www.encodeproject.org/files/ENCFF675MAI/@@download/ENCFF675MAI.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF042DNR bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF675MAI 586 ENCODE Processing Pipeline 81a0ac52b03dc1424624400101fe64d4 https://www.encodeproject.org/files/ENCFF042DNR/@@download/ENCFF042DNR.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF941SCI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF042DNR 41951 ENCODE Processing Pipeline 8cbe4cb1dbd3cccdaefb5e85940ba828 https://www.encodeproject.org/files/ENCFF941SCI/@@download/ENCFF941SCI.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF215YWT bigWig signal p-value ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF831UVV 1356991455 ENCODE Processing Pipeline 6943c32101d7b33f583ab95c5853e8de https://www.encodeproject.org/files/ENCFF215YWT/@@download/ENCFF215YWT.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF368UAQ bigBed narrowPeak peaks ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF675MAI 11694922 ENCODE Processing Pipeline a3f3225043b3ad910c940e0ec50414e5 https://www.encodeproject.org/files/ENCFF368UAQ/@@download/ENCFF368UAQ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF605WDK bigWig signal p-value ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF489YYE 1178752800 ENCODE Processing Pipeline 92ee56f5d1311fe4464ac0101db57263 https://www.encodeproject.org/files/ENCFF605WDK/@@download/ENCFF605WDK.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF563WGT bed narrowPeak peaks ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF489YYE 5389099 ENCODE Processing Pipeline 0f310cd34a9ae63e588e87d6d7495e81 https://www.encodeproject.org/files/ENCFF563WGT/@@download/ENCFF563WGT.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF728JAJ bigWig fold change over control ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF489YYE 1202423169 ENCODE Processing Pipeline e0b174e01883d6959c45fd59938df609 https://www.encodeproject.org/files/ENCFF728JAJ/@@download/ENCFF728JAJ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF947KAS bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF109PJK 28855 ENCODE Processing Pipeline 52a76e4508038dc86215099652eb91a9 https://www.encodeproject.org/files/ENCFF947KAS/@@download/ENCFF947KAS.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF980YZM bigBed narrowPeak peaks ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF563WGT 11669604 ENCODE Processing Pipeline da41cc8bbfc9841936579327d9c4d80e https://www.encodeproject.org/files/ENCFF980YZM/@@download/ENCFF980YZM.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF109PJK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR980OPB ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF563WGT 575 ENCODE Processing Pipeline f889c3b7453e31ae3ffc7154c7361d60 https://www.encodeproject.org/files/ENCFF109PJK/@@download/ENCFF109PJK.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF025XGP fastq reads ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF319EYM 2429020607 Richard Myers, HAIB 922a8961c8209ed62d82a13196552965 SRA:SRR6213675 https://www.encodeproject.org/files/ENCFF025XGP/@@download/ENCFF025XGP.fastq.gz HiSeq 2000 /files/ENCFF999NFH/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF319EYM fastq reads ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF025XGP 2362964548 Richard Myers, HAIB cf7acae8e04eccfe077ea95432130763 SRA:SRR6213675 https://www.encodeproject.org/files/ENCFF319EYM/@@download/ENCFF319EYM.fastq.gz HiSeq 2000 /files/ENCFF971VIW/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF009DSU bam unfiltered alignments ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF025XGP, ENCFF319EYM, ENCFF643CGH 5272741504 ENCODE Processing Pipeline 239825b5db371e2504a94450cd2c4d9f https://www.encodeproject.org/files/ENCFF009DSU/@@download/ENCFF009DSU.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF597ARJ bam unfiltered alignments ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF025XGP, ENCFF319EYM, ENCFF807MUK 5257815744 ENCODE Processing Pipeline 1cd0e6e24f49c42a17da5a7c560e7633 https://www.encodeproject.org/files/ENCFF597ARJ/@@download/ENCFF597ARJ.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF648GWA bam alignments ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF025XGP, ENCFF319EYM, ENCFF643CGH 2774008686 ENCODE Processing Pipeline 5a388de9e763e499d2f4506a63565ff7 https://www.encodeproject.org/files/ENCFF648GWA/@@download/ENCFF648GWA.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF630UCU bam alignments ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF025XGP, ENCFF319EYM, ENCFF807MUK 2771437023 ENCODE Processing Pipeline 5025a0c26e1b2eda241c3e53a8813cba https://www.encodeproject.org/files/ENCFF630UCU/@@download/ENCFF630UCU.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF130GLL bigWig signal p-value ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF648GWA 1092052555 ENCODE Processing Pipeline aec63445a07eaeb3eb65e8380ee5d4bd https://www.encodeproject.org/files/ENCFF130GLL/@@download/ENCFF130GLL.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF625AQW bigWig fold change over control ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF648GWA 985520251 ENCODE Processing Pipeline 156be8957818b6c5ecd39832cf2040d5 https://www.encodeproject.org/files/ENCFF625AQW/@@download/ENCFF625AQW.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF144BDA bed narrowPeak peaks ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF648GWA 4846171 ENCODE Processing Pipeline 1623c1d8fc3a87f9c1e631e79aefb79d https://www.encodeproject.org/files/ENCFF144BDA/@@download/ENCFF144BDA.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF630WSU bigBed narrowPeak peaks ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF144BDA 11688493 ENCODE Processing Pipeline 39d762f69b17d859190476d4bf5422d2 https://www.encodeproject.org/files/ENCFF630WSU/@@download/ENCFF630WSU.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF154QOD bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF199FCD 36686 ENCODE Processing Pipeline c4ddf4434c6875855507440cb414791b https://www.encodeproject.org/files/ENCFF154QOD/@@download/ENCFF154QOD.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF199FCD bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF144BDA, ENCFF419RSJ 943 ENCODE Processing Pipeline fdb611244fe73a455afc1fdd60686585 https://www.encodeproject.org/files/ENCFF199FCD/@@download/ENCFF199FCD.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF434UNF bigWig signal p-value ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF630UCU 979858158 ENCODE Processing Pipeline f459a85fca407d74a06e801068f99009 https://www.encodeproject.org/files/ENCFF434UNF/@@download/ENCFF434UNF.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF516GYN bigWig fold change over control ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF630UCU 999655991 ENCODE Processing Pipeline 7c534afefc9535dfe4bc4ee79841cd33 https://www.encodeproject.org/files/ENCFF516GYN/@@download/ENCFF516GYN.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF076NNI bigBed narrowPeak peaks ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF609XUG 11666509 ENCODE Processing Pipeline 1332867144e65c375dd2d9dfbb26418b https://www.encodeproject.org/files/ENCFF076NNI/@@download/ENCFF076NNI.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF902KAY bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF240NSI 15718 ENCODE Processing Pipeline 8d224e36162ad44114a094ba2c44cf87 https://www.encodeproject.org/files/ENCFF902KAY/@@download/ENCFF902KAY.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF240NSI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF609XUG 737 ENCODE Processing Pipeline b2ab53728e098e2949f6e4660fe8cd20 https://www.encodeproject.org/files/ENCFF240NSI/@@download/ENCFF240NSI.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF609XUG bed narrowPeak peaks ENCSR677FYM ChIP-seq UBERON:0010414 omental fat pad tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF630UCU 4845814 ENCODE Processing Pipeline d0aee8a8266310980417af38dbdde8f9 https://www.encodeproject.org/files/ENCFF609XUG/@@download/ENCFF609XUG.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF000PAS bam alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PBA 712123140 Richard Myers, HAIB 6cf810e7f6f6307e761bc33d534f6d79 https://www.encodeproject.org/files/ENCFF000PAS/@@download/ENCFF000PAS.bam hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000PAT bigBed broadPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UEE 978510 Richard Myers, HAIB 56dea7326f662ef5b6c97cafe8bfb798 https://www.encodeproject.org/files/ENCFF000PAT/@@download/ENCFF000PAT.bigBed hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000PAU bigBed broadPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UEF 1136315 Richard Myers, HAIB fb88a87385645060afbe8974a3192734 https://www.encodeproject.org/files/ENCFF000PAU/@@download/ENCFF000PAU.bigBed hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000PAV bam alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PBG 1156730822 Richard Myers, HAIB 68a82ed4fb268b5ca7eab2064cd12b6b https://www.encodeproject.org/files/ENCFF000PAV/@@download/ENCFF000PAV.bam hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000PAY bigWig raw signal ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 37567356 Richard Myers, HAIB 11207e687ceabceafed1a6db06cce499 https://www.encodeproject.org/files/ENCFF000PAY/@@download/ENCFF000PAY.bigWig hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PAZ bigWig raw signal ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 49539045 Richard Myers, HAIB 2b361d6b3eaafe95d9a64a5ee8326d04 https://www.encodeproject.org/files/ENCFF000PAZ/@@download/ENCFF000PAZ.bigWig hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PBA fastq reads ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 654166201 Richard Myers, HAIB 6a5a850d50cf83618845facac77dfb81 https://www.encodeproject.org/files/ENCFF000PBA/@@download/ENCFF000PBA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PBO/ released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000PBG fastq reads ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1177971235 Richard Myers, HAIB 906fc3a59fdcd1e84bff1001b3a18a7e https://www.encodeproject.org/files/ENCFF000PBG/@@download/ENCFF000PBG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PBO/ released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF001UEE bed broadPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 564962 Richard Myers, HAIB a72b31a9a8dd79e8f5c52c078e3fe626 https://www.encodeproject.org/files/ENCFF001UEE/@@download/ENCFF001UEE.bed.gz hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UEF bed broadPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 689417 Richard Myers, HAIB d70c78fd472cfd1a1fd3f117ed48ed37 https://www.encodeproject.org/files/ENCFF001UEF/@@download/ENCFF001UEF.bed.gz hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CJU bed narrowPeak optimal idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 591744 ENCODE Consortium Analysis Working Group a43279815d0173f798277e643247cfaa https://www.encodeproject.org/files/ENCFF002CJU/@@download/ENCFF002CJU.bed.gz hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF222VEF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE ENCFF002CJU 1410241 ENCODE Consortium 5654db55c86f53f30dce90d02257a472 https://www.encodeproject.org/files/ENCFF222VEF/@@download/ENCFF222VEF.bigBed hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF419NQM bam unfiltered alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PBA, ENCFF643CGH 829896153 ENCODE Processing Pipeline 336b40e82c795746290969a2248e07c4 https://www.encodeproject.org/files/ENCFF419NQM/@@download/ENCFF419NQM.bam GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF701ALM bam alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PBA, ENCFF643CGH 456069553 ENCODE Processing Pipeline 1fbcf2da365518e5404bf6873643163e https://www.encodeproject.org/files/ENCFF701ALM/@@download/ENCFF701ALM.bam GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF500KKR bam unfiltered alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PBG, ENCFF643CGH 1426232435 ENCODE Processing Pipeline b44a4d9130c454ed62f7e6c27a30dd35 https://www.encodeproject.org/files/ENCFF500KKR/@@download/ENCFF500KKR.bam GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF472QNP bam alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PBG, ENCFF643CGH 839982420 ENCODE Processing Pipeline f1c054aed2f796e364f1fbf4423f1132 https://www.encodeproject.org/files/ENCFF472QNP/@@download/ENCFF472QNP.bam GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF704WFR bam alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PBA, ENCFF807MUK 455965748 ENCODE Processing Pipeline af1caed98059c9aa67b1848556a51f93 https://www.encodeproject.org/files/ENCFF704WFR/@@download/ENCFF704WFR.bam hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF557OOJ bam unfiltered alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PBA, ENCFF807MUK 829181704 ENCODE Processing Pipeline 0736ceb046d8df334771127e29eb0c2b https://www.encodeproject.org/files/ENCFF557OOJ/@@download/ENCFF557OOJ.bam hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF361LLG bam unfiltered alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PBG, ENCFF807MUK 1424957110 ENCODE Processing Pipeline 708ace0ed46cee878cd1289ad390046f https://www.encodeproject.org/files/ENCFF361LLG/@@download/ENCFF361LLG.bam hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF752STA bam alignments ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PBG, ENCFF807MUK 839767451 ENCODE Processing Pipeline 3b6ef9233118828f10113d72d013a644 https://www.encodeproject.org/files/ENCFF752STA/@@download/ENCFF752STA.bam hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF672LIJ bigWig signal p-value ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF280GWX, ENCFF704WFR 391547429 ENCODE Processing Pipeline 579b14d7d47494c50e035f90abe0aea9 https://www.encodeproject.org/files/ENCFF672LIJ/@@download/ENCFF672LIJ.bigWig hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF676AYJ bigWig fold change over control ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF280GWX, ENCFF704WFR, ENCFF752STA 518900156 ENCODE Processing Pipeline d8ac9bb42e2b77bbf70e7c50e810383b https://www.encodeproject.org/files/ENCFF676AYJ/@@download/ENCFF676AYJ.bigWig hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF580JQM bed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF280GWX, ENCFF752STA 6363255 ENCODE Processing Pipeline 172a6fe8a42f6c0180258fcc629881ae https://www.encodeproject.org/files/ENCFF580JQM/@@download/ENCFF580JQM.bed.gz hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF587BDE bigBed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178TUV 12585444 ENCODE Processing Pipeline 4baa1ffe0406b77d81cebbc423f28f05 https://www.encodeproject.org/files/ENCFF587BDE/@@download/ENCFF587BDE.bigBed hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF458NJP bigBed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF580JQM 12449452 ENCODE Processing Pipeline 23c62510f108b391e347154032a44e71 https://www.encodeproject.org/files/ENCFF458NJP/@@download/ENCFF458NJP.bigBed hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF617QEN bed narrowPeak optimal idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF039LAR, ENCFF178TUV, ENCFF580JQM 723136 ENCODE Processing Pipeline 8834aef0c99b7b03604db5c1a08ed75c https://www.encodeproject.org/files/ENCFF617QEN/@@download/ENCFF617QEN.bed.gz hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF718HZQ bigWig fold change over control ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF280GWX, ENCFF752STA 380769213 ENCODE Processing Pipeline dbe9a0daa909f7421ff10a5951d5a05f https://www.encodeproject.org/files/ENCFF718HZQ/@@download/ENCFF718HZQ.bigWig hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF197KTW bigWig fold change over control ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF280GWX, ENCFF704WFR 228489610 ENCODE Processing Pipeline cadfecc37a85490b629f55cdeb65b814 https://www.encodeproject.org/files/ENCFF197KTW/@@download/ENCFF197KTW.bigWig hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF856LHW bigWig signal p-value ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF280GWX, ENCFF752STA 504392208 ENCODE Processing Pipeline 64dbcab8faa2a949620215c6678dba34 https://www.encodeproject.org/files/ENCFF856LHW/@@download/ENCFF856LHW.bigWig hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF048BDD bigWig signal p-value ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF280GWX, ENCFF704WFR, ENCFF752STA 520557566 ENCODE Processing Pipeline 13cda6bcde3e4061f37c6d58cb918f49 https://www.encodeproject.org/files/ENCFF048BDD/@@download/ENCFF048BDD.bigWig hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF039LAR bed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF280GWX, ENCFF704WFR 5860686 ENCODE Processing Pipeline b657c99a66af8fc4b0ec8c9b3eace9e9 https://www.encodeproject.org/files/ENCFF039LAR/@@download/ENCFF039LAR.bed.gz hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF592FZT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF161PUF 1522760 ENCODE Processing Pipeline a2d936278eca2300f35f9f239a7abf6f https://www.encodeproject.org/files/ENCFF592FZT/@@download/ENCFF592FZT.bigBed hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF582AOQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF617QEN 1615980 ENCODE Processing Pipeline ae3f8b0081421a18f8f4297e1283e825 https://www.encodeproject.org/files/ENCFF582AOQ/@@download/ENCFF582AOQ.bigBed hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF178TUV bed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF280GWX, ENCFF704WFR, ENCFF752STA 7035140 ENCODE Processing Pipeline cbda43ccc69d6f09f485387070ff7d37 https://www.encodeproject.org/files/ENCFF178TUV/@@download/ENCFF178TUV.bed.gz hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF888GII bigBed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF039LAR 12176033 ENCODE Processing Pipeline 2b4dbeff4be22f9de70b2ecbbc2f6986 https://www.encodeproject.org/files/ENCFF888GII/@@download/ENCFF888GII.bigBed hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF161PUF bed narrowPeak conservative idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF039LAR, ENCFF178TUV, ENCFF580JQM 672547 ENCODE Processing Pipeline 03e43a27ba84d2a3fa3b9e4de73f7a51 https://www.encodeproject.org/files/ENCFF161PUF/@@download/ENCFF161PUF.bed.gz hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF794LVU bigWig fold change over control ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF472QNP, ENCFF701ALM, ENCFF769ESE 518558201 ENCODE Processing Pipeline 4ef1fba99103e27e943bb9975902f285 https://www.encodeproject.org/files/ENCFF794LVU/@@download/ENCFF794LVU.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF445OGN bigWig signal p-value ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF701ALM, ENCFF769ESE 434964418 ENCODE Processing Pipeline 636b12c508927b738f2a59e568fab3f5 https://www.encodeproject.org/files/ENCFF445OGN/@@download/ENCFF445OGN.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF697WEI bed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF472QNP, ENCFF701ALM, ENCFF769ESE 7013879 ENCODE Processing Pipeline bf69af55bf8f5ef3fcbb6b66e5b9f335 https://www.encodeproject.org/files/ENCFF697WEI/@@download/ENCFF697WEI.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF934KIL bed narrowPeak conservative idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041OWP, ENCFF419RSJ, ENCFF697WEI, ENCFF753VRR 670716 ENCODE Processing Pipeline 25a92f9156f786aa4bcfda8c234e9316 https://www.encodeproject.org/files/ENCFF934KIL/@@download/ENCFF934KIL.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF764BTV bigWig fold change over control ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF701ALM, ENCFF769ESE 233536787 ENCODE Processing Pipeline c2af49ed2a27fa1312bf21d242de2881 https://www.encodeproject.org/files/ENCFF764BTV/@@download/ENCFF764BTV.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF753VRR bed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF472QNP, ENCFF769ESE 6378371 ENCODE Processing Pipeline d005e552f596e9726e4985f15a0c6ac2 https://www.encodeproject.org/files/ENCFF753VRR/@@download/ENCFF753VRR.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF289ULL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF934KIL 1517430 ENCODE Processing Pipeline ba6f5116a51552b0b766566aca2e4f0d https://www.encodeproject.org/files/ENCFF289ULL/@@download/ENCFF289ULL.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF910KOG bed narrowPeak optimal idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041OWP, ENCFF419RSJ, ENCFF697WEI, ENCFF753VRR 725721 ENCODE Processing Pipeline b1717fd23be577169da82a81da10274a https://www.encodeproject.org/files/ENCFF910KOG/@@download/ENCFF910KOG.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF929KAN bigWig signal p-value ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF472QNP, ENCFF769ESE 545937828 ENCODE Processing Pipeline 22be7255b2a3b3a81940f5a33dc60363 https://www.encodeproject.org/files/ENCFF929KAN/@@download/ENCFF929KAN.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF367EET bigWig signal p-value ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF472QNP, ENCFF701ALM, ENCFF769ESE 518878047 ENCODE Processing Pipeline 193a9eaf6786983ed072de02acf9e2c7 https://www.encodeproject.org/files/ENCFF367EET/@@download/ENCFF367EET.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF012SQZ bigWig fold change over control ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF472QNP, ENCFF769ESE 379412131 ENCODE Processing Pipeline b201af76b7b1f4c33de83a6b72c3001e https://www.encodeproject.org/files/ENCFF012SQZ/@@download/ENCFF012SQZ.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF041OWP bed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF701ALM, ENCFF769ESE 5858511 ENCODE Processing Pipeline 773ee5544e9d5403e61066df2ade5b13 https://www.encodeproject.org/files/ENCFF041OWP/@@download/ENCFF041OWP.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF330FLA bigBed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF041OWP 12178813 ENCODE Processing Pipeline 51a405da2245f34d7db7c70861f1dcad https://www.encodeproject.org/files/ENCFF330FLA/@@download/ENCFF330FLA.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF361NBC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF910KOG 1618195 ENCODE Processing Pipeline 9e9aaba290bcc04a9d4c74c6d76deca9 https://www.encodeproject.org/files/ENCFF361NBC/@@download/ENCFF361NBC.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF022HCN bigBed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF753VRR 12473492 ENCODE Processing Pipeline 64166f74571c4da356f0c301cb922175 https://www.encodeproject.org/files/ENCFF022HCN/@@download/ENCFF022HCN.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF710PHG bigBed narrowPeak peaks ENCSR000BML ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF697WEI 12552502 ENCODE Processing Pipeline f513806c2371b54387596f8ca1b7be09 https://www.encodeproject.org/files/ENCFF710PHG/@@download/ENCFF710PHG.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF328YJN fastq reads ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 1 76 paired-ended 1 ENCFF006VGP 2626553309 Richard Myers, HAIB 3eba2cc8b7957c0c76587cb14eb6d26a https://www.encodeproject.org/files/ENCFF328YJN/@@download/ENCFF328YJN.fastq.gz HiSeq 2000 /files/ENCFF007ATE/ released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF006VGP fastq reads ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 1 76 paired-ended 2 ENCFF328YJN 2754857449 Richard Myers, HAIB 943ccc936b761b252ded0e34a3bc01bb https://www.encodeproject.org/files/ENCFF006VGP/@@download/ENCFF006VGP.fastq.gz HiSeq 2000 /files/ENCFF629EIQ/ released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF149VZU bam alignments ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 76 ENCFF006VGP, ENCFF328YJN, ENCFF807MUK 4717508116 ENCODE Processing Pipeline 69ba8650217d2aefe5431b569913ebf2 https://www.encodeproject.org/files/ENCFF149VZU/@@download/ENCFF149VZU.bam hg19 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF714ZRF bam unfiltered alignments ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 76 ENCFF006VGP, ENCFF328YJN, ENCFF807MUK 6331352360 ENCODE Processing Pipeline f3b8f72d9387b3ffe6a85fc89e648c17 https://www.encodeproject.org/files/ENCFF714ZRF/@@download/ENCFF714ZRF.bam hg19 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF268CPV bam unfiltered alignments ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 76 ENCFF006VGP, ENCFF328YJN, ENCFF643CGH 6357840955 ENCODE Processing Pipeline b7f48e22129869c64d6897d43e1e77b4 https://www.encodeproject.org/files/ENCFF268CPV/@@download/ENCFF268CPV.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF330KYG bam alignments ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 76 ENCFF006VGP, ENCFF328YJN, ENCFF643CGH 4722549765 ENCODE Processing Pipeline 5c858cfc4e2280f37745c20d56d2c69b https://www.encodeproject.org/files/ENCFF330KYG/@@download/ENCFF330KYG.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF815RVR bigBed narrowPeak peaks ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF399OOG 13396564 ENCODE Processing Pipeline 29897ffc9da2618a37fa26c768e054b4 https://www.encodeproject.org/files/ENCFF815RVR/@@download/ENCFF815RVR.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, mismatched status, file validation error ENCFF010PQF bigWig signal p-value ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF330KYG, ENCFF943XRD 1666217952 ENCODE Processing Pipeline 827f9a011860fae5a2d42f541b0ac0dd https://www.encodeproject.org/files/ENCFF010PQF/@@download/ENCFF010PQF.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF534ZUJ bigWig fold change over control ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF330KYG, ENCFF943XRD 1534251346 ENCODE Processing Pipeline e0c9245453029f149ccdc4d44198820f https://www.encodeproject.org/files/ENCFF534ZUJ/@@download/ENCFF534ZUJ.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF473KUA bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF399OOG, ENCFF419RSJ 549912 ENCODE Processing Pipeline 42f853c4bc56b1454488f673b23c1572 https://www.encodeproject.org/files/ENCFF473KUA/@@download/ENCFF473KUA.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, mismatched status, file validation error ENCFF060KVH bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF473KUA 1094903 ENCODE Processing Pipeline bb5b2f0bd89d1b8c5c5bf1155098212e https://www.encodeproject.org/files/ENCFF060KVH/@@download/ENCFF060KVH.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF571VWB bigWig signal p-value ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF149VZU, ENCFF437XIH 1638537051 ENCODE Processing Pipeline e7d2f6b9ea9bf10e41b28b173aa8a6a6 https://www.encodeproject.org/files/ENCFF571VWB/@@download/ENCFF571VWB.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF986GSI bigWig fold change over control ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF149VZU, ENCFF437XIH 1511473785 ENCODE Processing Pipeline df3befb9639c47b4a05d072376a9cd1a https://www.encodeproject.org/files/ENCFF986GSI/@@download/ENCFF986GSI.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF285ODQ bed narrowPeak peaks ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF149VZU, ENCFF437XIH 7110981 ENCODE Processing Pipeline 96495d5e4402340ae4ae01a383537ee0 https://www.encodeproject.org/files/ENCFF285ODQ/@@download/ENCFF285ODQ.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF673JFD bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF050TAS 1080944 ENCODE Processing Pipeline 91f4423d051e496226c3bbcb916f390f https://www.encodeproject.org/files/ENCFF673JFD/@@download/ENCFF673JFD.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF773TKK bigBed narrowPeak peaks ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF285ODQ 13369927 ENCODE Processing Pipeline 15423a88f766ebce6e071de24ea7d26a https://www.encodeproject.org/files/ENCFF773TKK/@@download/ENCFF773TKK.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF050TAS bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR844PVS ChIP-seq UBERON:0008367 breast epithelium tissue adult male 54 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-11-01 ENCODE 1 ENCFF001TDO, ENCFF285ODQ 539676 ENCODE Processing Pipeline f8063e38499782bc7b4fa74323e19edf https://www.encodeproject.org/files/ENCFF050TAS/@@download/ENCFF050TAS.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO, mismatched file status, file validation error ENCFF296JWD fastq reads ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF952JIY 1014213896 Richard Myers, HAIB c9c595e2c2ef2fd7c7ff036ccba26ac6 SRA:SRR6213057 https://www.encodeproject.org/files/ENCFF296JWD/@@download/ENCFF296JWD.fastq.gz HiSeq 2000 /files/ENCFF573BIK/ released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF952JIY fastq reads ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF296JWD 997926250 Richard Myers, HAIB 531f5326aee1478e71175945a430e088 SRA:SRR6213057 https://www.encodeproject.org/files/ENCFF952JIY/@@download/ENCFF952JIY.fastq.gz HiSeq 2000 /files/ENCFF534FKH/ released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF488XHE bam unfiltered alignments ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF296JWD, ENCFF643CGH, ENCFF952JIY 2565722714 ENCODE Processing Pipeline 42fe6b5a2aa07eb85fc693b2b702657e https://www.encodeproject.org/files/ENCFF488XHE/@@download/ENCFF488XHE.bam GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF024VTM bam alignments ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF296JWD, ENCFF643CGH, ENCFF952JIY 1922058343 ENCODE Processing Pipeline 6a434313fd5e41e91305c7eb7c9adcb8 https://www.encodeproject.org/files/ENCFF024VTM/@@download/ENCFF024VTM.bam GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF743KGQ bam unfiltered alignments ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF296JWD, ENCFF807MUK, ENCFF952JIY 2552718007 ENCODE Processing Pipeline 5510c19f2d38011309e6ffdd9ecdb9f1 https://www.encodeproject.org/files/ENCFF743KGQ/@@download/ENCFF743KGQ.bam hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF734MVF bam alignments ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF296JWD, ENCFF807MUK, ENCFF952JIY 1921489874 ENCODE Processing Pipeline 043d0cf5a93d5d0dee0e6866900a5557 https://www.encodeproject.org/files/ENCFF734MVF/@@download/ENCFF734MVF.bam hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF051KIV bigWig signal p-value ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF024VTM 831543178 ENCODE Processing Pipeline cde2c48f17fdb8819f2d22186e4f2b7e https://www.encodeproject.org/files/ENCFF051KIV/@@download/ENCFF051KIV.bigWig GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF266WPV bigBed narrowPeak peaks ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF417FRP 11385478 ENCODE Processing Pipeline 41653627685e758ee8af7540aa2c19fd https://www.encodeproject.org/files/ENCFF266WPV/@@download/ENCFF266WPV.bigBed GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF417FRP bed narrowPeak peaks ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF024VTM 4893847 ENCODE Processing Pipeline 5d5f15a7320fd809b942740523791a6a https://www.encodeproject.org/files/ENCFF417FRP/@@download/ENCFF417FRP.bed.gz GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF031GKU bigWig fold change over control ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF024VTM 723718828 ENCODE Processing Pipeline 005c18bf873e74a1c68d69487e3df4c7 https://www.encodeproject.org/files/ENCFF031GKU/@@download/ENCFF031GKU.bigWig GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF079BIZ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF417FRP, ENCFF419RSJ 201 ENCODE Processing Pipeline e67fb86c5101e81f485d31493fd6f829 https://www.encodeproject.org/files/ENCFF079BIZ/@@download/ENCFF079BIZ.bed.gz GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF993ZMK bed narrowPeak peaks ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF734MVF 4865823 ENCODE Processing Pipeline a0d59ab605d344fde3564f85bcc92357 https://www.encodeproject.org/files/ENCFF993ZMK/@@download/ENCFF993ZMK.bed.gz hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF804YJD bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF079BIZ 14473 ENCODE Processing Pipeline ac839a6da01b384dae4dd5e45c775099 https://www.encodeproject.org/files/ENCFF804YJD/@@download/ENCFF804YJD.bigBed GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF303EZP bigWig signal p-value ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF734MVF 863882988 ENCODE Processing Pipeline 9d3d14fe919677124a8efc5fc1fb4005 https://www.encodeproject.org/files/ENCFF303EZP/@@download/ENCFF303EZP.bigWig hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF331NEO bigWig fold change over control ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF734MVF 719100900 ENCODE Processing Pipeline b1c529e073df6bee06f34746573ecfa9 https://www.encodeproject.org/files/ENCFF331NEO/@@download/ENCFF331NEO.bigWig hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF563SDF bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF993ZMK 71 ENCODE Processing Pipeline 6a9db2046169e7a656e3b2a0d5d94ae6 https://www.encodeproject.org/files/ENCFF563SDF/@@download/ENCFF563SDF.bed.gz hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF834UDV bigBed narrowPeak peaks ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF993ZMK 11323336 ENCODE Processing Pipeline ba82a8c17633165dc888ed6eb858179f https://www.encodeproject.org/files/ENCFF834UDV/@@download/ENCFF834UDV.bigBed hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF203OPM bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR300KUL ChIP-seq UBERON:0036149 suprapubic skin tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF563SDF 13928 ENCODE Processing Pipeline 41b92bc017ab6cc5f7a927efde63d355 https://www.encodeproject.org/files/ENCFF203OPM/@@download/ENCFF203OPM.bigBed hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking ENCFF000NER bam alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NEZ 605979558 Richard Myers, HAIB c2d6e0ea21dabe7402a435823c6bcd34 https://www.encodeproject.org/files/ENCFF000NER/@@download/ENCFF000NER.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NES bigBed broadPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TTH 1036093 Richard Myers, HAIB e2aeb5e5b19a9360629baeb1b7010a44 https://www.encodeproject.org/files/ENCFF000NES/@@download/ENCFF000NES.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NET bigBed broadPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TTI 1694888 Richard Myers, HAIB 2dc3df99ddef84c65b66be1625f3b47b https://www.encodeproject.org/files/ENCFF000NET/@@download/ENCFF000NET.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEU bam alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NFG 673542030 Richard Myers, HAIB cc1f0c8bccac1b1403b14f5f0e8cc09e https://www.encodeproject.org/files/ENCFF000NEU/@@download/ENCFF000NEU.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEW bigWig raw signal ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 59191920 Richard Myers, HAIB 5389d016b49bd49e3b1a4c9e973c49c0 https://www.encodeproject.org/files/ENCFF000NEW/@@download/ENCFF000NEW.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEX bigWig raw signal ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 72946110 Richard Myers, HAIB 21de68e950b6550b6ac87d0c618ef4d6 https://www.encodeproject.org/files/ENCFF000NEX/@@download/ENCFF000NEX.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEZ fastq reads ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 481612169 Richard Myers, HAIB 7701e01f0abefa6087e02985ba0ac522 https://www.encodeproject.org/files/ENCFF000NEZ/@@download/ENCFF000NEZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGC/ released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NFG fastq reads ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1298312303 Richard Myers, HAIB d51f566646f310c50b721352d94e5e8a https://www.encodeproject.org/files/ENCFF000NFG/@@download/ENCFF000NFG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGC/ released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF001TTH bed broadPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 580847 Richard Myers, HAIB 01e1ea390275be67150b65a4ee14f2f3 https://www.encodeproject.org/files/ENCFF001TTH/@@download/ENCFF001TTH.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF001TTI bed broadPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 806449 Richard Myers, HAIB 8c9493546935e80042b1198a4f01b5ba https://www.encodeproject.org/files/ENCFF001TTI/@@download/ENCFF001TTI.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF002CFX bed narrowPeak optimal idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 581364 ENCODE Consortium Analysis Working Group 0b45eb55fec3034011a0f3cb9340b833 https://www.encodeproject.org/files/ENCFF002CFX/@@download/ENCFF002CFX.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF654ZDO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CFX 1586657 ENCODE Consortium 208ce343acb0255eeac67553ef86cb4e https://www.encodeproject.org/files/ENCFF654ZDO/@@download/ENCFF654ZDO.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF165KKA bam unfiltered alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NEZ, ENCFF807MUK 596428589 ENCODE Processing Pipeline fa88aed454df87f01a159e60d93e6e88 https://www.encodeproject.org/files/ENCFF165KKA/@@download/ENCFF165KKA.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF239AAI bam alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NEZ, ENCFF807MUK 243765517 ENCODE Processing Pipeline d7b9db9a2316c7ba15fb6b75c33c692e https://www.encodeproject.org/files/ENCFF239AAI/@@download/ENCFF239AAI.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF537TSZ bam unfiltered alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NEZ, ENCFF643CGH 596965490 ENCODE Processing Pipeline 21eb333a1447ef418dbba549fc233160 https://www.encodeproject.org/files/ENCFF537TSZ/@@download/ENCFF537TSZ.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF324RAL bam unfiltered alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NFG, ENCFF643CGH 1478838115 ENCODE Processing Pipeline 53ee9e81fcf119dc1fac76d5d4d211a1 https://www.encodeproject.org/files/ENCFF324RAL/@@download/ENCFF324RAL.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF843BZC bam alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NEZ, ENCFF643CGH 243481682 ENCODE Processing Pipeline afa19b840c1efbc2d59c225aed772685 https://www.encodeproject.org/files/ENCFF843BZC/@@download/ENCFF843BZC.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF014GUN bam alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NFG, ENCFF643CGH 359043420 ENCODE Processing Pipeline a1b6d28ed5d73a42c7e1dd1d1825c803 https://www.encodeproject.org/files/ENCFF014GUN/@@download/ENCFF014GUN.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF400LWW bam unfiltered alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NFG, ENCFF807MUK 1478099276 ENCODE Processing Pipeline bdadc077a0f10e842e90c5c6d69580fa https://www.encodeproject.org/files/ENCFF400LWW/@@download/ENCFF400LWW.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF819TOT bam alignments ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NFG, ENCFF807MUK 359382877 ENCODE Processing Pipeline 039e117d906c5c019298c1eff28a766f https://www.encodeproject.org/files/ENCFF819TOT/@@download/ENCFF819TOT.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF148PMC bigWig signal p-value ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF239AAI, ENCFF686SSI 247409793 ENCODE Processing Pipeline 671fdfe287bd0a08258f9d08203dbc8f https://www.encodeproject.org/files/ENCFF148PMC/@@download/ENCFF148PMC.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF656EBY bigWig signal p-value ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF686SSI, ENCFF819TOT 275159005 ENCODE Processing Pipeline 85b3760f1fd11221c96ad4b60a4f6a84 https://www.encodeproject.org/files/ENCFF656EBY/@@download/ENCFF656EBY.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF321OEE bigWig signal p-value ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF239AAI, ENCFF686SSI, ENCFF819TOT 307000656 ENCODE Processing Pipeline b10b583467cefa481dbd9ddb9b8885d2 https://www.encodeproject.org/files/ENCFF321OEE/@@download/ENCFF321OEE.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF472ROH bigWig fold change over control ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF239AAI, ENCFF686SSI 99630117 ENCODE Processing Pipeline 372ea0328901a3f0d9574eb93ff6dfa8 https://www.encodeproject.org/files/ENCFF472ROH/@@download/ENCFF472ROH.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF154YWS bigWig fold change over control ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF686SSI, ENCFF819TOT 127807375 ENCODE Processing Pipeline 248f4cca6b9642d71aefa87b5c2beb2c https://www.encodeproject.org/files/ENCFF154YWS/@@download/ENCFF154YWS.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF816OBG bigWig fold change over control ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF239AAI, ENCFF686SSI, ENCFF819TOT 191967877 ENCODE Processing Pipeline 4cb3750e20645d6c700216a250cd4f30 https://www.encodeproject.org/files/ENCFF816OBG/@@download/ENCFF816OBG.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF364YCD bed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF239AAI, ENCFF686SSI 2830949 ENCODE Processing Pipeline 2686da2e4cfab88186b5dc072363644d https://www.encodeproject.org/files/ENCFF364YCD/@@download/ENCFF364YCD.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF031ZVS bed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF686SSI, ENCFF819TOT 4174068 ENCODE Processing Pipeline 47231b1a5648f818b7f63399c4138828 https://www.encodeproject.org/files/ENCFF031ZVS/@@download/ENCFF031ZVS.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF170PDN bed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF239AAI, ENCFF686SSI, ENCFF819TOT 5796823 ENCODE Processing Pipeline 06db58c707fc0a346916d98732bd7a24 https://www.encodeproject.org/files/ENCFF170PDN/@@download/ENCFF170PDN.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF138LHK bigBed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF364YCD 6324970 ENCODE Processing Pipeline d17a0beb8ed3291fea10a24f8d7930fa https://www.encodeproject.org/files/ENCFF138LHK/@@download/ENCFF138LHK.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF542YDC bigBed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF031ZVS 8993965 ENCODE Processing Pipeline 1f259cfa39d7d2587da8af53b2dd9a03 https://www.encodeproject.org/files/ENCFF542YDC/@@download/ENCFF542YDC.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF624CJJ bigBed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF170PDN 12081633 ENCODE Processing Pipeline d97797f7af93815d51786a0d19d27abe https://www.encodeproject.org/files/ENCFF624CJJ/@@download/ENCFF624CJJ.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF511OKP bed narrowPeak conservative idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF031ZVS, ENCFF170PDN, ENCFF364YCD 511497 ENCODE Processing Pipeline c3d3fa2c77fafb856716813c4696bc1f https://www.encodeproject.org/files/ENCFF511OKP/@@download/ENCFF511OKP.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF322KJY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF511OKP 1222273 ENCODE Processing Pipeline e229852217be4ae521ba2da96b4c0e17 https://www.encodeproject.org/files/ENCFF322KJY/@@download/ENCFF322KJY.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF292PSZ bed narrowPeak optimal idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF031ZVS, ENCFF170PDN, ENCFF364YCD 538973 ENCODE Processing Pipeline e8d72a684afd2ff3959a8669a598c82b https://www.encodeproject.org/files/ENCFF292PSZ/@@download/ENCFF292PSZ.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF028YJD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF292PSZ 1267544 ENCODE Processing Pipeline fee0fa98e4bab1e71bc6eb7606da673a https://www.encodeproject.org/files/ENCFF028YJD/@@download/ENCFF028YJD.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF331KLM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF209ZSP 1224826 ENCODE Processing Pipeline e37e71770bcaf14d749472dc1b9e1dde https://www.encodeproject.org/files/ENCFF331KLM/@@download/ENCFF331KLM.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF397BYG bigWig signal p-value ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF291OFI, ENCFF843BZC 277753104 ENCODE Processing Pipeline c2676e6e2eb027b47c520ed1c56cf3b5 https://www.encodeproject.org/files/ENCFF397BYG/@@download/ENCFF397BYG.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF827AMI bigWig signal p-value ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF014GUN, ENCFF291OFI 271632880 ENCODE Processing Pipeline 4eaf002a6712879e85ae68c2f4d41287 https://www.encodeproject.org/files/ENCFF827AMI/@@download/ENCFF827AMI.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF891PVU bigWig signal p-value ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF014GUN, ENCFF291OFI, ENCFF843BZC 306883849 ENCODE Processing Pipeline cb27a85dabb91e744f8e65726e343490 https://www.encodeproject.org/files/ENCFF891PVU/@@download/ENCFF891PVU.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF970UXM bigWig fold change over control ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF291OFI, ENCFF843BZC 99291024 ENCODE Processing Pipeline cf36c3c6384a13df51316c4fc1c7478c https://www.encodeproject.org/files/ENCFF970UXM/@@download/ENCFF970UXM.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF103AWZ bigWig fold change over control ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF014GUN, ENCFF291OFI 127555066 ENCODE Processing Pipeline e636086c5c5cabe55cc38c3588de0e6b https://www.encodeproject.org/files/ENCFF103AWZ/@@download/ENCFF103AWZ.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF951FGK bigWig fold change over control ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF014GUN, ENCFF291OFI, ENCFF843BZC 191262523 ENCODE Processing Pipeline 016bb3966345bd657793820e1b5fb353 https://www.encodeproject.org/files/ENCFF951FGK/@@download/ENCFF951FGK.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF360GYC bed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF291OFI, ENCFF843BZC 2834693 ENCODE Processing Pipeline 5921ae8898ba9912a497ab646586a69c https://www.encodeproject.org/files/ENCFF360GYC/@@download/ENCFF360GYC.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF466YER bed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF014GUN, ENCFF291OFI 4175422 ENCODE Processing Pipeline adfb31bd13d2e169565fb91569b174ce https://www.encodeproject.org/files/ENCFF466YER/@@download/ENCFF466YER.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF124TNM bed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF014GUN, ENCFF291OFI, ENCFF843BZC 5796535 ENCODE Processing Pipeline 3a884c603f2c566d5dfd9c6c557ac17e https://www.encodeproject.org/files/ENCFF124TNM/@@download/ENCFF124TNM.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF046HXP bigBed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF360GYC 6340741 ENCODE Processing Pipeline fae26a25db0d616580cf79b5d410948d https://www.encodeproject.org/files/ENCFF046HXP/@@download/ENCFF046HXP.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF664KTN bed narrowPeak optimal idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF124TNM, ENCFF360GYC, ENCFF419RSJ, ENCFF466YER 537077 ENCODE Processing Pipeline 771dd437fff64602bf0347e9f97e7fae https://www.encodeproject.org/files/ENCFF664KTN/@@download/ENCFF664KTN.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF917KLS bigBed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF466YER 9000535 ENCODE Processing Pipeline aab8d78e63bb7b5e912b3aa3e4c4ca7b https://www.encodeproject.org/files/ENCFF917KLS/@@download/ENCFF917KLS.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF409LUH bigBed narrowPeak peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF124TNM 12083705 ENCODE Processing Pipeline 1099dfb073e6a62902810e58ace5d891 https://www.encodeproject.org/files/ENCFF409LUH/@@download/ENCFF409LUH.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF209ZSP bed narrowPeak conservative idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF124TNM, ENCFF360GYC, ENCFF419RSJ, ENCFF466YER 511655 ENCODE Processing Pipeline f4f64a97a82dbd59c04cd1d02cb46e44 https://www.encodeproject.org/files/ENCFF209ZSP/@@download/ENCFF209ZSP.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF742XNH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF664KTN 1266024 ENCODE Processing Pipeline 36c578294d7c66194a0c3065b83bb746 https://www.encodeproject.org/files/ENCFF742XNH/@@download/ENCFF742XNH.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000OCD bam alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000OCO 1721673923 Richard Myers, HAIB cf5e1a3e34070deb95606c8c9819bccf https://www.encodeproject.org/files/ENCFF000OCD/@@download/ENCFF000OCD.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000OCF bigBed broadPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TYS 2012942 Richard Myers, HAIB b96e7ba9949eba26278f248e5d0b05bc https://www.encodeproject.org/files/ENCFF000OCF/@@download/ENCFF000OCF.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000OCG bigBed broadPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TYU 1803337 Richard Myers, HAIB 88d5913a8f20627e3679b0ab39423a1a https://www.encodeproject.org/files/ENCFF000OCG/@@download/ENCFF000OCG.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000OCI bigWig raw signal ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 1 93108974 Richard Myers, HAIB 8038385b98273771ca254c5b63be221a https://www.encodeproject.org/files/ENCFF000OCI/@@download/ENCFF000OCI.bigWig hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF000OCJ bigWig raw signal ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 1 62928729 Richard Myers, HAIB e32681ab843c80c1d1226ed1b4476ec4 https://www.encodeproject.org/files/ENCFF000OCJ/@@download/ENCFF000OCJ.bigWig hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF000OCK bam alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000OCP 1956068426 Richard Myers, HAIB 7500f4418ad99edb9818b3843782aff4 https://www.encodeproject.org/files/ENCFF000OCK/@@download/ENCFF000OCK.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000OCO fastq reads ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1775160382 Richard Myers, HAIB e38468b345305b740ce2957d4915b6bd https://www.encodeproject.org/files/ENCFF000OCO/@@download/ENCFF000OCO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF000OCP fastq reads ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1930366302 Richard Myers, HAIB 9484a8e46d2c7abab24aa55ad1c04bf1 https://www.encodeproject.org/files/ENCFF000OCP/@@download/ENCFF000OCP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF001TYS bed broadPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 1 1351121 Richard Myers, HAIB 3f97af6157a31ed4e33c6ee4335241d1 https://www.encodeproject.org/files/ENCFF001TYS/@@download/ENCFF001TYS.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF001TYU bed broadPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 1 1153047 Richard Myers, HAIB cb8749a7564b1149d051e9ee3e15fed9 https://www.encodeproject.org/files/ENCFF001TYU/@@download/ENCFF001TYU.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF002CHS bed narrowPeak optimal idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1352322 ENCODE Consortium Analysis Working Group 302146bfd3784632e94fe3ef1dde166f https://www.encodeproject.org/files/ENCFF002CHS/@@download/ENCFF002CHS.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF692ISE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE ENCFF002CHS 3053993 ENCODE Consortium 7df587d6a487b12c59653d34e375bb0e https://www.encodeproject.org/files/ENCFF692ISE/@@download/ENCFF692ISE.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF038MRS bam unfiltered alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000OCO, ENCFF643CGH 1871583302 ENCODE Processing Pipeline 3c8b302e303dd579ead4dbf304f7d8d7 https://www.encodeproject.org/files/ENCFF038MRS/@@download/ENCFF038MRS.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF884LEJ bam alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000OCP, ENCFF643CGH 1310865014 ENCODE Processing Pipeline 2c7328f9c0522b10017e23b87d6c443c https://www.encodeproject.org/files/ENCFF884LEJ/@@download/ENCFF884LEJ.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF405AFR bam unfiltered alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000OCP, ENCFF643CGH 2086585384 ENCODE Processing Pipeline 594c8f737520e87c45837644633fc0f9 https://www.encodeproject.org/files/ENCFF405AFR/@@download/ENCFF405AFR.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF579PRC bam alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000OCO, ENCFF643CGH 1228544425 ENCODE Processing Pipeline 4fde830e948cda520da031390b6c7586 https://www.encodeproject.org/files/ENCFF579PRC/@@download/ENCFF579PRC.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF274RRW bam unfiltered alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000OCO, ENCFF807MUK 1871001660 ENCODE Processing Pipeline 10504dd4087f4cc70e3ebaebfb3bb13c https://www.encodeproject.org/files/ENCFF274RRW/@@download/ENCFF274RRW.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF187NWS bam alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000OCO, ENCFF807MUK 1223093856 ENCODE Processing Pipeline 2b08f5391556de23d2685890c27c597c https://www.encodeproject.org/files/ENCFF187NWS/@@download/ENCFF187NWS.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF102ABY bam unfiltered alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000OCP, ENCFF807MUK 2085249488 ENCODE Processing Pipeline f94f2ea8064ee009416f26e16d82033a https://www.encodeproject.org/files/ENCFF102ABY/@@download/ENCFF102ABY.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF987SJL bam alignments ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000OCP, ENCFF807MUK 1304072691 ENCODE Processing Pipeline 3d84de396b7843d51a9ee68831ba31fb https://www.encodeproject.org/files/ENCFF987SJL/@@download/ENCFF987SJL.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF012VSZ bigWig fold change over control ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF537DAJ, ENCFF579PRC 561425339 ENCODE Processing Pipeline c321f37255b51135b5cde9f09d312885 https://www.encodeproject.org/files/ENCFF012VSZ/@@download/ENCFF012VSZ.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF162QGZ bed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF884LEJ 6272224 ENCODE Processing Pipeline 274e80d557c26e101e561d1f7b6d0b54 https://www.encodeproject.org/files/ENCFF162QGZ/@@download/ENCFF162QGZ.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF335BBU bigWig fold change over control ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF537DAJ, ENCFF579PRC, ENCFF884LEJ 914955227 ENCODE Processing Pipeline 8f187dc3fa90a2f2b495c34eeacbec27 https://www.encodeproject.org/files/ENCFF335BBU/@@download/ENCFF335BBU.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF995DLI bigWig signal p-value ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF537DAJ, ENCFF579PRC, ENCFF884LEJ 803540294 ENCODE Processing Pipeline 12f224b4da14ee03364a0184657f137e https://www.encodeproject.org/files/ENCFF995DLI/@@download/ENCFF995DLI.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF369GXX bigBed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF369MFU 13409750 ENCODE Processing Pipeline a7f40fd7b11fb737cd4f77b34ae2ad27 https://www.encodeproject.org/files/ENCFF369GXX/@@download/ENCFF369GXX.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF850UWN bigWig fold change over control ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF884LEJ 556746961 ENCODE Processing Pipeline 358067426c048c83cb397c526b2636b0 https://www.encodeproject.org/files/ENCFF850UWN/@@download/ENCFF850UWN.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF369MFU bed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF537DAJ, ENCFF579PRC 6793826 ENCODE Processing Pipeline 655c667f55d86da02c20a1d2e8834dbe https://www.encodeproject.org/files/ENCFF369MFU/@@download/ENCFF369MFU.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF309SPQ bed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF537DAJ, ENCFF579PRC, ENCFF884LEJ 6617463 ENCODE Processing Pipeline d40c8272c3c83502c42cceac5214dc4e https://www.encodeproject.org/files/ENCFF309SPQ/@@download/ENCFF309SPQ.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF226HQN bigBed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF309SPQ 12876528 ENCODE Processing Pipeline a12bbacdc307b529f373d64761ed1619 https://www.encodeproject.org/files/ENCFF226HQN/@@download/ENCFF226HQN.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF677QUK bed narrowPeak optimal idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF162QGZ, ENCFF309SPQ, ENCFF369MFU, ENCFF419RSJ 1217020 ENCODE Processing Pipeline 7f24bbb13e0a76433ca8fb20b323147e https://www.encodeproject.org/files/ENCFF677QUK/@@download/ENCFF677QUK.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF248LUS bigBed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF162QGZ 12713207 ENCODE Processing Pipeline 01a42451547f53589f3d8fc1605c6413 https://www.encodeproject.org/files/ENCFF248LUS/@@download/ENCFF248LUS.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF657ILV bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF017CJU 2002352 ENCODE Processing Pipeline d5aa41f64fa195f1746cfaaa1dd426a2 https://www.encodeproject.org/files/ENCFF657ILV/@@download/ENCFF657ILV.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF224GNF bigWig signal p-value ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF537DAJ, ENCFF579PRC 749227463 ENCODE Processing Pipeline d79e412ca8a9908d3d7ab3c7788f9331 https://www.encodeproject.org/files/ENCFF224GNF/@@download/ENCFF224GNF.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF248JTC bigWig signal p-value ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF884LEJ 728533073 ENCODE Processing Pipeline 7e1d57c37a9871019d1046345a96639d https://www.encodeproject.org/files/ENCFF248JTC/@@download/ENCFF248JTC.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF017CJU bed narrowPeak conservative idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF162QGZ, ENCFF309SPQ, ENCFF369MFU, ENCFF419RSJ 1070026 ENCODE Processing Pipeline 89f429f7bb751ad117407b25bc2415c4 https://www.encodeproject.org/files/ENCFF017CJU/@@download/ENCFF017CJU.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF102DRN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF677QUK 2208462 ENCODE Processing Pipeline 9ace97b5ec472de575574ec36554867c https://www.encodeproject.org/files/ENCFF102DRN/@@download/ENCFF102DRN.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF255ZHC bigWig signal p-value ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF187NWS, ENCFF508HCX 618591245 ENCODE Processing Pipeline 8b891fdae0316aff7f9af0c5cb216067 https://www.encodeproject.org/files/ENCFF255ZHC/@@download/ENCFF255ZHC.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF302PDU bigWig fold change over control ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF187NWS, ENCFF508HCX 562878581 ENCODE Processing Pipeline 07fbdeb043990716b843c0f05e0746c5 https://www.encodeproject.org/files/ENCFF302PDU/@@download/ENCFF302PDU.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF106VZH bigWig signal p-value ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF508HCX, ENCFF987SJL 676423514 ENCODE Processing Pipeline 4eb85791264180f597c6837e8355e3e1 https://www.encodeproject.org/files/ENCFF106VZH/@@download/ENCFF106VZH.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF760PWN bigWig signal p-value ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF187NWS, ENCFF508HCX, ENCFF987SJL 801586221 ENCODE Processing Pipeline 725b752e4c5f1988f8d541a5036027cb https://www.encodeproject.org/files/ENCFF760PWN/@@download/ENCFF760PWN.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF153QVS bigWig fold change over control ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF508HCX, ENCFF987SJL 560449408 ENCODE Processing Pipeline 4088fda573d7e88aae867606f652a569 https://www.encodeproject.org/files/ENCFF153QVS/@@download/ENCFF153QVS.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF308ISM bed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF187NWS, ENCFF508HCX, ENCFF987SJL 6708986 ENCODE Processing Pipeline a0b560d9262b1a6d9aa464957703bd79 https://www.encodeproject.org/files/ENCFF308ISM/@@download/ENCFF308ISM.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF248QFF bed narrowPeak optimal idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF308ISM, ENCFF670DLM, ENCFF689WPU 1213545 ENCODE Processing Pipeline f32fa41421aa72103e62f7a02ec79e44 https://www.encodeproject.org/files/ENCFF248QFF/@@download/ENCFF248QFF.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF238SAO bigWig fold change over control ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF187NWS, ENCFF508HCX, ENCFF987SJL 917947329 ENCODE Processing Pipeline 971075bf1ee14a8ddc3b7fb90465ae2f https://www.encodeproject.org/files/ENCFF238SAO/@@download/ENCFF238SAO.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF055DJP bigBed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF308ISM 13008645 ENCODE Processing Pipeline 5c13603eea68a33d25c51a1ecba3dbb9 https://www.encodeproject.org/files/ENCFF055DJP/@@download/ENCFF055DJP.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF689WPU bed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF187NWS, ENCFF508HCX 6167189 ENCODE Processing Pipeline 73e8fd857d18c96a2d5ac75e326a95fb https://www.encodeproject.org/files/ENCFF689WPU/@@download/ENCFF689WPU.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF381XGD bigBed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF670DLM 12878507 ENCODE Processing Pipeline c2aece7c8094d4bcd3f71019680b617a https://www.encodeproject.org/files/ENCFF381XGD/@@download/ENCFF381XGD.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF157CYE bigBed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF689WPU 12652895 ENCODE Processing Pipeline bbcf8a31fa0c879ac68927c89f7dedf3 https://www.encodeproject.org/files/ENCFF157CYE/@@download/ENCFF157CYE.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF670DLM bed narrowPeak peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF508HCX, ENCFF987SJL 6389708 ENCODE Processing Pipeline 72b8ad68ef98cdec0a11f280ae041ddc https://www.encodeproject.org/files/ENCFF670DLM/@@download/ENCFF670DLM.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF458CFK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF147DQK 2000804 ENCODE Processing Pipeline bed22a4778da86de969e60fce3457a91 https://www.encodeproject.org/files/ENCFF458CFK/@@download/ENCFF458CFK.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF782WBX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF248QFF 2208232 ENCODE Processing Pipeline 208ab5c5a7a5720f71bb01ddd0171a63 https://www.encodeproject.org/files/ENCFF782WBX/@@download/ENCFF782WBX.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF147DQK bed narrowPeak conservative idr thresholded peaks ENCSR000BRI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens RUNX3-human ENCAB000AKM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF308ISM, ENCFF670DLM, ENCFF689WPU 1067367 ENCODE Processing Pipeline bed2c322ce905180a0ff3dc14e658782 https://www.encodeproject.org/files/ENCFF147DQK/@@download/ENCFF147DQK.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF712JVW fastq reads ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 1 50 single-ended 1528439528 Richard Myers, HAIB 9a3dcfbae96633d9175475232070e6ec SRA:SRR5331363 https://www.encodeproject.org/files/ENCFF712JVW/@@download/ENCFF712JVW.fastq.gz HiSeq 2000 /files/ENCFF958NMQ/ released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF407SOA fastq reads ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 1 50 single-ended 1719236462 Richard Myers, HAIB 64d4133ef12e67d4a3fd6d71bf2ec849 SRA:SRR5331362 https://www.encodeproject.org/files/ENCFF407SOA/@@download/ENCFF407SOA.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF554EXS bam alignments ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 50 ENCFF407SOA, ENCFF807MUK 1417944965 ENCODE Processing Pipeline 140bfe3b46541ca3528c47addfb26869 https://www.encodeproject.org/files/ENCFF554EXS/@@download/ENCFF554EXS.bam hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF988MKR bam alignments ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 50 ENCFF712JVW, ENCFF807MUK 1256730844 ENCODE Processing Pipeline e48a2bd831e6bb4b0834f112590f805b https://www.encodeproject.org/files/ENCFF988MKR/@@download/ENCFF988MKR.bam hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF373GQR bigWig signal p-value ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 ENCFF654EHF, ENCFF988MKR, ENCFF991UTU 991371951 ENCODE Processing Pipeline 42dc74f81526944477efe5dbc0619ecc https://www.encodeproject.org/files/ENCFF373GQR/@@download/ENCFF373GQR.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF803IWJ bigWig signal p-value ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 ENCFF554EXS, ENCFF654EHF, ENCFF991UTU 1090698509 ENCODE Processing Pipeline 1544129cce68fe8fabe16b83bf1e29fa https://www.encodeproject.org/files/ENCFF803IWJ/@@download/ENCFF803IWJ.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF532ZXY bigWig signal p-value ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF554EXS, ENCFF654EHF, ENCFF988MKR, ENCFF991UTU 1295925423 ENCODE Processing Pipeline e3c3e627e6c363949d30c2e590d79c9e https://www.encodeproject.org/files/ENCFF532ZXY/@@download/ENCFF532ZXY.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF589FSL bigWig fold change over control ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 ENCFF654EHF, ENCFF988MKR, ENCFF991UTU 956037212 ENCODE Processing Pipeline 4f086a865186fc96c80bf9377bc19202 https://www.encodeproject.org/files/ENCFF589FSL/@@download/ENCFF589FSL.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF713KQJ bigWig fold change over control ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 ENCFF554EXS, ENCFF654EHF, ENCFF991UTU 1057145872 ENCODE Processing Pipeline d447c02f894ca69cce95264dced9ceb1 https://www.encodeproject.org/files/ENCFF713KQJ/@@download/ENCFF713KQJ.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF290SKO bigWig fold change over control ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF554EXS, ENCFF654EHF, ENCFF988MKR, ENCFF991UTU 1447870627 ENCODE Processing Pipeline b09ff62d5d3a645ab1d6fcf744addea9 https://www.encodeproject.org/files/ENCFF290SKO/@@download/ENCFF290SKO.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF703VGN bed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF554EXS, ENCFF654EHF, ENCFF988MKR, ENCFF991UTU 7061543 ENCODE Processing Pipeline 324fb15d8aa687b77cf1688b01662497 https://www.encodeproject.org/files/ENCFF703VGN/@@download/ENCFF703VGN.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF775EEP bigBed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 ENCFF414TMK 13402188 ENCODE Processing Pipeline 0c1d37bb78ab96d07ce098b69b8dc7a7 https://www.encodeproject.org/files/ENCFF775EEP/@@download/ENCFF775EEP.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF414TMK bed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 ENCFF654EHF, ENCFF988MKR, ENCFF991UTU 6738216 ENCODE Processing Pipeline f0927c488d28f7e28dfe87553ea3db22 https://www.encodeproject.org/files/ENCFF414TMK/@@download/ENCFF414TMK.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF517GNM bed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 ENCFF554EXS, ENCFF654EHF, ENCFF991UTU 6782982 ENCODE Processing Pipeline 19b75432199988920527c7bf357bc5aa https://www.encodeproject.org/files/ENCFF517GNM/@@download/ENCFF517GNM.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF258ZBJ bigBed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF703VGN 13388944 ENCODE Processing Pipeline 94aeaa7a828608920e159992642b9691 https://www.encodeproject.org/files/ENCFF258ZBJ/@@download/ENCFF258ZBJ.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF035UQQ bigBed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 ENCFF517GNM 13454978 ENCODE Processing Pipeline 9f96203e041d9f18d86ffaf0929b6752 https://www.encodeproject.org/files/ENCFF035UQQ/@@download/ENCFF035UQQ.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF160AUQ bam unfiltered alignments ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 50 ENCFF643CGH, ENCFF712JVW 1710441937 ENCODE Processing Pipeline eb9cb78e8bd94ed2e3d04e05d12bdeb6 https://www.encodeproject.org/files/ENCFF160AUQ/@@download/ENCFF160AUQ.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF756TFV bam unfiltered alignments ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 50 ENCFF407SOA, ENCFF643CGH 1903659231 ENCODE Processing Pipeline 0a53befc3c5b07a62771cca0d6974aab https://www.encodeproject.org/files/ENCFF756TFV/@@download/ENCFF756TFV.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF866YKI bam alignments ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 50 ENCFF643CGH, ENCFF712JVW 1256771969 ENCODE Processing Pipeline c10c75287d44ab6928acb73a02e54df0 https://www.encodeproject.org/files/ENCFF866YKI/@@download/ENCFF866YKI.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF263YXM bam alignments ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 50 ENCFF407SOA, ENCFF643CGH 1418118129 ENCODE Processing Pipeline 55b3b2e528149af0922c86aed0d3a8ba https://www.encodeproject.org/files/ENCFF263YXM/@@download/ENCFF263YXM.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF232ZMW bigWig signal p-value ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 ENCFF370PSF, ENCFF866YKI, ENCFF995OIG 1116014468 ENCODE Processing Pipeline 17199b78bd76ed0cf84c81cd4d201106 https://www.encodeproject.org/files/ENCFF232ZMW/@@download/ENCFF232ZMW.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF506ZDB bigWig signal p-value ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 ENCFF263YXM, ENCFF370PSF, ENCFF995OIG 1114561548 ENCODE Processing Pipeline f32d626c6658b80d430900863d2ceca1 https://www.encodeproject.org/files/ENCFF506ZDB/@@download/ENCFF506ZDB.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF506OKQ bigWig signal p-value ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF263YXM, ENCFF370PSF, ENCFF866YKI, ENCFF995OIG 1469928574 ENCODE Processing Pipeline 32f543b67634a0686e3e564c188b6669 https://www.encodeproject.org/files/ENCFF506OKQ/@@download/ENCFF506OKQ.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF727KCL bigWig fold change over control ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 ENCFF370PSF, ENCFF866YKI, ENCFF995OIG 951242905 ENCODE Processing Pipeline ebeae0b5a933cd4f70f7f95603f4028a https://www.encodeproject.org/files/ENCFF727KCL/@@download/ENCFF727KCL.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF169NMJ bigWig fold change over control ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 ENCFF263YXM, ENCFF370PSF, ENCFF995OIG 1060463022 ENCODE Processing Pipeline f7f41585b1a5dcbbd7da16efec6421e3 https://www.encodeproject.org/files/ENCFF169NMJ/@@download/ENCFF169NMJ.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF869EBO bigWig fold change over control ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF263YXM, ENCFF370PSF, ENCFF866YKI, ENCFF995OIG 1466268821 ENCODE Processing Pipeline 0d37063acbfac61f60e6a66a7b98c508 https://www.encodeproject.org/files/ENCFF869EBO/@@download/ENCFF869EBO.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF537AKU bigBed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF154XEH 13451088 ENCODE Processing Pipeline 23b07b6fa45f79a661a0915280b299a3 https://www.encodeproject.org/files/ENCFF537AKU/@@download/ENCFF537AKU.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF562CAY bigBed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 ENCFF172QSW 13343459 ENCODE Processing Pipeline e12af6f06e61b2972d175e652f17610c https://www.encodeproject.org/files/ENCFF562CAY/@@download/ENCFF562CAY.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF154XEH bed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF263YXM, ENCFF370PSF, ENCFF866YKI, ENCFF995OIG 7044187 ENCODE Processing Pipeline 427425b5777e3d43ba05165f1a1f778a https://www.encodeproject.org/files/ENCFF154XEH/@@download/ENCFF154XEH.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF085YHB bigBed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 ENCFF461OKL 13459392 ENCODE Processing Pipeline 3e84bb99c228c305ec572d5f2a55973e https://www.encodeproject.org/files/ENCFF085YHB/@@download/ENCFF085YHB.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF584ZYB bigBed narrowPeak conservative idr thresholded peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF643EJZ 1280785 ENCODE Processing Pipeline dd8eec5bd607f267cee327b4af76d944 https://www.encodeproject.org/files/ENCFF584ZYB/@@download/ENCFF584ZYB.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF172QSW bed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1 ENCFF370PSF, ENCFF866YKI, ENCFF995OIG 6551975 ENCODE Processing Pipeline d96e4db4d9c2a2ae38e6088c450ed375 https://www.encodeproject.org/files/ENCFF172QSW/@@download/ENCFF172QSW.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF461OKL bed narrowPeak peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 2 ENCFF263YXM, ENCFF370PSF, ENCFF995OIG 6651654 ENCODE Processing Pipeline 77258aafb182476b999ba541c03da403 https://www.encodeproject.org/files/ENCFF461OKL/@@download/ENCFF461OKL.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF819WNB bed narrowPeak optimal idr thresholded peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF154XEH, ENCFF172QSW, ENCFF419RSJ, ENCFF461OKL 694091 ENCODE Processing Pipeline f507ceca296b28982d5c3bfe37a4b1b8 https://www.encodeproject.org/files/ENCFF819WNB/@@download/ENCFF819WNB.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF643EJZ bed narrowPeak conservative idr thresholded peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF154XEH, ENCFF172QSW, ENCFF419RSJ, ENCFF461OKL 675047 ENCODE Processing Pipeline b5f0461600f98ef0c3c7be89b271a71b https://www.encodeproject.org/files/ENCFF643EJZ/@@download/ENCFF643EJZ.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF925XCZ bigBed narrowPeak optimal idr thresholded peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF819WNB 1311940 ENCODE Processing Pipeline 49b295a86d368c9ccf31414e5cab3656 https://www.encodeproject.org/files/ENCFF925XCZ/@@download/ENCFF925XCZ.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF422THA bigBed narrowPeak conservative idr thresholded peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF486IPS 1158867 ENCODE Processing Pipeline debd399d8648c00ed7baad297627ec6a https://www.encodeproject.org/files/ENCFF422THA/@@download/ENCFF422THA.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF043HEN bed narrowPeak optimal idr thresholded peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF001TDO, ENCFF414TMK, ENCFF517GNM, ENCFF703VGN 611435 ENCODE Processing Pipeline 0fd15e7d5d5cb7811e831ffc2fd6b812 https://www.encodeproject.org/files/ENCFF043HEN/@@download/ENCFF043HEN.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF486IPS bed narrowPeak conservative idr thresholded peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF001TDO, ENCFF414TMK, ENCFF517GNM, ENCFF703VGN 594335 ENCODE Processing Pipeline 495518567a4b9717cd7456d3f4b7f16c https://www.encodeproject.org/files/ENCFF486IPS/@@download/ENCFF486IPS.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF931HRK bigBed narrowPeak optimal idr thresholded peaks ENCSR168SMX ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-18 ENCODE 1, 2 ENCFF043HEN 1184296 ENCODE Processing Pipeline ec3f82d16858c3fa0619afbbd926bb65 https://www.encodeproject.org/files/ENCFF931HRK/@@download/ENCFF931HRK.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF643ZXX fastq reads ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 1 50 single-ended 2442016867 Richard Myers, HAIB e29b7c53e9d90145780e6de4dba1baa0 SRA:SRR5339547 https://www.encodeproject.org/files/ENCFF643ZXX/@@download/ENCFF643ZXX.fastq.gz HiSeq 2000 /files/ENCFF123QZN/ released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF171UDL fastq reads ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 1 50 single-ended 2497237428 Richard Myers, HAIB da6b8787e8a688bc84747f6fe908dc32 SRA:SRR5339546 https://www.encodeproject.org/files/ENCFF171UDL/@@download/ENCFF171UDL.fastq.gz HiSeq 2000 /files/ENCFF977SGP/ released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF018ELX bam alignments ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 50 ENCFF171UDL, ENCFF807MUK 1730151462 ENCODE Processing Pipeline 1df025c6081d5372e58db05f39db84f7 https://www.encodeproject.org/files/ENCFF018ELX/@@download/ENCFF018ELX.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF231NPN bam alignments ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 50 ENCFF643ZXX, ENCFF807MUK 1657725749 ENCODE Processing Pipeline 42f9a42f57986ed108ee19d84a31567b https://www.encodeproject.org/files/ENCFF231NPN/@@download/ENCFF231NPN.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF353UAM bigWig signal p-value ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF200LFK, ENCFF231NPN, ENCFF235CCD 850172427 ENCODE Processing Pipeline 6cbcdf10831a13037c551589a940411d https://www.encodeproject.org/files/ENCFF353UAM/@@download/ENCFF353UAM.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF700SWH bigWig signal p-value ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF018ELX, ENCFF235CCD 676002025 ENCODE Processing Pipeline e91e58491f4f20a261da253c4273a1ea https://www.encodeproject.org/files/ENCFF700SWH/@@download/ENCFF700SWH.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF722HAU bigWig signal p-value ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF018ELX, ENCFF200LFK, ENCFF231NPN, ENCFF235CCD 1147383617 ENCODE Processing Pipeline 6138be68b9e657293e1732ea9da10330 https://www.encodeproject.org/files/ENCFF722HAU/@@download/ENCFF722HAU.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF901NNV bigWig fold change over control ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF200LFK, ENCFF231NPN, ENCFF235CCD 1007721106 ENCODE Processing Pipeline bbeb53ba3a77fcffc533dd0e888d80c0 https://www.encodeproject.org/files/ENCFF901NNV/@@download/ENCFF901NNV.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF941FGM bigWig fold change over control ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF018ELX, ENCFF235CCD 836713388 ENCODE Processing Pipeline 0978e4ae94579bea4d81881c6a382b3c https://www.encodeproject.org/files/ENCFF941FGM/@@download/ENCFF941FGM.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF984NZJ bigWig fold change over control ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF018ELX, ENCFF200LFK, ENCFF231NPN, ENCFF235CCD 1526559027 ENCODE Processing Pipeline 90478727ae098203cffa5dae2935e01c https://www.encodeproject.org/files/ENCFF984NZJ/@@download/ENCFF984NZJ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF846YGT bed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF200LFK, ENCFF231NPN, ENCFF235CCD 6917938 ENCODE Processing Pipeline da9ca8dbb874b2b094e90ef812bee635 https://www.encodeproject.org/files/ENCFF846YGT/@@download/ENCFF846YGT.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF044MZF bed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF018ELX, ENCFF235CCD 6541951 ENCODE Processing Pipeline 52901ea7efa04a261a8663c35d9b394f https://www.encodeproject.org/files/ENCFF044MZF/@@download/ENCFF044MZF.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF727LYG bed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF018ELX, ENCFF200LFK, ENCFF231NPN, ENCFF235CCD 7053572 ENCODE Processing Pipeline 72107ad71177e5a33d9cf66532faa662 https://www.encodeproject.org/files/ENCFF727LYG/@@download/ENCFF727LYG.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF144IPZ bigBed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF846YGT 13811898 ENCODE Processing Pipeline cda316b7f47c0dda493dd69fa68e7681 https://www.encodeproject.org/files/ENCFF144IPZ/@@download/ENCFF144IPZ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF441DPQ bigBed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF044MZF 13638687 ENCODE Processing Pipeline ec181943c27f82e3deb804a5a9fa99b6 https://www.encodeproject.org/files/ENCFF441DPQ/@@download/ENCFF441DPQ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF525OKK bigBed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF727LYG 13743659 ENCODE Processing Pipeline 7a8c58d3b24b8ce18f37abb613382a20 https://www.encodeproject.org/files/ENCFF525OKK/@@download/ENCFF525OKK.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF916RJA bam unfiltered alignments ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 50 ENCFF643CGH, ENCFF643ZXX 2389497024 ENCODE Processing Pipeline d9ccf4b07dc839e0f02fb578f91080f1 https://www.encodeproject.org/files/ENCFF916RJA/@@download/ENCFF916RJA.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF991TKR bam unfiltered alignments ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 50 ENCFF171UDL, ENCFF643CGH 2497451731 ENCODE Processing Pipeline 26d5c30b7972ca767fe5342e938f9794 https://www.encodeproject.org/files/ENCFF991TKR/@@download/ENCFF991TKR.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF910WTA bam alignments ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 50 ENCFF643CGH, ENCFF643ZXX 1657720016 ENCODE Processing Pipeline 0748ebac4e559c788a408c941866df76 https://www.encodeproject.org/files/ENCFF910WTA/@@download/ENCFF910WTA.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF445BCF bam alignments ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 50 ENCFF171UDL, ENCFF643CGH 1730247156 ENCODE Processing Pipeline 9b2af97658610f11ddb29ba096e0851b https://www.encodeproject.org/files/ENCFF445BCF/@@download/ENCFF445BCF.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF076BJE bigWig signal p-value ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF200YPH, ENCFF337WHA, ENCFF910WTA 866067999 ENCODE Processing Pipeline 3c3ec4bfd1bb55e12dafc70053bc5b6a https://www.encodeproject.org/files/ENCFF076BJE/@@download/ENCFF076BJE.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF926QQE bigWig signal p-value ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF200YPH, ENCFF445BCF 673502403 ENCODE Processing Pipeline d8b588befe16fcbdf6eac431e08ccb36 https://www.encodeproject.org/files/ENCFF926QQE/@@download/ENCFF926QQE.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF026IIQ bigWig signal p-value ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF200YPH, ENCFF337WHA, ENCFF445BCF, ENCFF910WTA 1157167082 ENCODE Processing Pipeline 221dbdc43b466605e350749112c3f0cf https://www.encodeproject.org/files/ENCFF026IIQ/@@download/ENCFF026IIQ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF982UYD bigWig fold change over control ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF200YPH, ENCFF337WHA, ENCFF910WTA 1010254796 ENCODE Processing Pipeline 1906845a09bf0d17c2c73538577ff04f https://www.encodeproject.org/files/ENCFF982UYD/@@download/ENCFF982UYD.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF007PVL bigWig fold change over control ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF200YPH, ENCFF445BCF 832845793 ENCODE Processing Pipeline 638615ca36f673ca319d53da064f1dc7 https://www.encodeproject.org/files/ENCFF007PVL/@@download/ENCFF007PVL.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF667HOI bigWig fold change over control ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF200YPH, ENCFF337WHA, ENCFF445BCF, ENCFF910WTA 1538303425 ENCODE Processing Pipeline bb03f178c1e35cf3c0178283dc07fcf1 https://www.encodeproject.org/files/ENCFF667HOI/@@download/ENCFF667HOI.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF462WPV bigBed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF184KZB 13641348 ENCODE Processing Pipeline 5fb206ee526081300804ba7c5c67fd30 https://www.encodeproject.org/files/ENCFF462WPV/@@download/ENCFF462WPV.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF013PVV bed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF200YPH, ENCFF337WHA, ENCFF910WTA 6768336 ENCODE Processing Pipeline 66f48d92637c1a9bea77986836d08122 https://www.encodeproject.org/files/ENCFF013PVV/@@download/ENCFF013PVV.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF184KZB bed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 2 ENCFF200YPH, ENCFF445BCF 6420495 ENCODE Processing Pipeline c7cc2e139602ed616a5cb14d96abeb5f https://www.encodeproject.org/files/ENCFF184KZB/@@download/ENCFF184KZB.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF628MXS bed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF200YPH, ENCFF337WHA, ENCFF445BCF, ENCFF910WTA 7025976 ENCODE Processing Pipeline 60cf8e87e980c31a4ebf3189ee54c5bf https://www.encodeproject.org/files/ENCFF628MXS/@@download/ENCFF628MXS.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF513QWE bigBed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1 ENCFF013PVV 13724017 ENCODE Processing Pipeline 7cdd2025df468a652e67964122f49a1f https://www.encodeproject.org/files/ENCFF513QWE/@@download/ENCFF513QWE.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF886CCK bigBed narrowPeak conservative idr thresholded peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF208GHS 2047637 ENCODE Processing Pipeline 80a8ebdd930817a8b4867c71f5b19d63 https://www.encodeproject.org/files/ENCFF886CCK/@@download/ENCFF886CCK.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF692UHJ bigBed narrowPeak peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF628MXS 13753293 ENCODE Processing Pipeline 0dae24a07c9a330e2a77a948a5467c8b https://www.encodeproject.org/files/ENCFF692UHJ/@@download/ENCFF692UHJ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF208GHS bed narrowPeak conservative idr thresholded peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF013PVV, ENCFF184KZB, ENCFF419RSJ, ENCFF628MXS 1013827 ENCODE Processing Pipeline 44878c9e31a9f178619ba7934437f8ba https://www.encodeproject.org/files/ENCFF208GHS/@@download/ENCFF208GHS.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF229WFR bed narrowPeak optimal idr thresholded peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF013PVV, ENCFF184KZB, ENCFF419RSJ, ENCFF628MXS 1097826 ENCODE Processing Pipeline d48ae05858854fae5dd9fe37411c3d39 https://www.encodeproject.org/files/ENCFF229WFR/@@download/ENCFF229WFR.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF670JLC bigBed narrowPeak optimal idr thresholded peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF229WFR 2168615 ENCODE Processing Pipeline 348efb006379cce60de08bd55411ebe4 https://www.encodeproject.org/files/ENCFF670JLC/@@download/ENCFF670JLC.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF863KHC bigBed narrowPeak conservative idr thresholded peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF271YUO 1466088 ENCODE Processing Pipeline 56e6918316ed10fcac0fbe5889cb06cb https://www.encodeproject.org/files/ENCFF863KHC/@@download/ENCFF863KHC.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF271YUO bed narrowPeak conservative idr thresholded peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF044MZF, ENCFF727LYG, ENCFF846YGT 926160 ENCODE Processing Pipeline 989469d4691b22d44ece108328fc2bee https://www.encodeproject.org/files/ENCFF271YUO/@@download/ENCFF271YUO.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF959HHD bigBed narrowPeak optimal idr thresholded peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF108ZTV 2036469 ENCODE Processing Pipeline 0ae74746ddc2f58122cf36a028fb3a72 https://www.encodeproject.org/files/ENCFF959HHD/@@download/ENCFF959HHD.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF108ZTV bed narrowPeak optimal idr thresholded peaks ENCSR917QNE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens RAD21-human ENCAB000AKG DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF044MZF, ENCFF727LYG, ENCFF846YGT 1008002 ENCODE Processing Pipeline 524494eb4a5d531f9c8a7c43202a4027 https://www.encodeproject.org/files/ENCFF108ZTV/@@download/ENCFF108ZTV.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000NKL bam alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NKT 754336985 Richard Myers, HAIB 4650a98e92892303541971a205fbe3c0 https://www.encodeproject.org/files/ENCFF000NKL/@@download/ENCFF000NKL.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NKM bigBed broadPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TUL 440461 Richard Myers, HAIB b018ab74f13d634fbe304f5c8d2952a3 https://www.encodeproject.org/files/ENCFF000NKM/@@download/ENCFF000NKM.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NKN bigBed broadPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TUM 379769 Richard Myers, HAIB d5407d06bed618170ad287a71918dbf0 https://www.encodeproject.org/files/ENCFF000NKN/@@download/ENCFF000NKN.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NKO bam alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NKZ 1298449777 Richard Myers, HAIB 709610a0f44e72d643107342b039273a https://www.encodeproject.org/files/ENCFF000NKO/@@download/ENCFF000NKO.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NKR bigWig raw signal ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 10245078 Richard Myers, HAIB b45d8b21ecfcf4a3e340ca9db416492e https://www.encodeproject.org/files/ENCFF000NKR/@@download/ENCFF000NKR.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NKS bigWig raw signal ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 10705026 Richard Myers, HAIB 8892c6d1f461d34a78f959044bf4cb5e https://www.encodeproject.org/files/ENCFF000NKS/@@download/ENCFF000NKS.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NKT fastq reads ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 645596072 Richard Myers, HAIB 51f92cb075ecf736e9da6d8627228ef0 https://www.encodeproject.org/files/ENCFF000NKT/@@download/ENCFF000NKT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NPN/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NKZ fastq reads ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1208509841 Richard Myers, HAIB 7250d4d3bfa6750f086f79b3e7443337 https://www.encodeproject.org/files/ENCFF000NKZ/@@download/ENCFF000NKZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NPN/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TUL bed broadPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 281878 Richard Myers, HAIB 681fab358b6e86bbec26ace0da32e170 https://www.encodeproject.org/files/ENCFF001TUL/@@download/ENCFF001TUL.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TUM bed broadPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 220780 Richard Myers, HAIB af519353c3883887e096f250b125e2d5 https://www.encodeproject.org/files/ENCFF001TUM/@@download/ENCFF001TUM.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CGH bed narrowPeak optimal idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 503330 ENCODE Consortium Analysis Working Group dada712ff792fceffd9d90d3fe249d2d https://www.encodeproject.org/files/ENCFF002CGH/@@download/ENCFF002CGH.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF833ZKR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE ENCFF002CGH 901034 ENCODE Consortium 992e12e9cb03aa9a083e12a079031ff9 https://www.encodeproject.org/files/ENCFF833ZKR/@@download/ENCFF833ZKR.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF455SUD bam unfiltered alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NKT, ENCFF807MUK 886882725 ENCODE Processing Pipeline cd31daaa34e25e45476f39077f236000 https://www.encodeproject.org/files/ENCFF455SUD/@@download/ENCFF455SUD.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF477SJG bam alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NKT, ENCFF807MUK 528449795 ENCODE Processing Pipeline 16495cf20d8aa82fc8cfb7f868e3fef3 https://www.encodeproject.org/files/ENCFF477SJG/@@download/ENCFF477SJG.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF467HPD bam unfiltered alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NKZ, ENCFF807MUK 1597376749 ENCODE Processing Pipeline 191d2aaf02afc702f20b84dfa8f7e81f https://www.encodeproject.org/files/ENCFF467HPD/@@download/ENCFF467HPD.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF100KVY bam alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NKZ, ENCFF807MUK 979848155 ENCODE Processing Pipeline eecf8ee46c3c1974e8bb4a9749fe9369 https://www.encodeproject.org/files/ENCFF100KVY/@@download/ENCFF100KVY.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF913BRO bam unfiltered alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NKT, ENCFF643CGH 890738884 ENCODE Processing Pipeline 37cca749a704728bffafc22237afd8eb https://www.encodeproject.org/files/ENCFF913BRO/@@download/ENCFF913BRO.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF061THL bam unfiltered alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NKZ, ENCFF643CGH 1604019003 ENCODE Processing Pipeline 30ffc1b1a2a7482483aa3e7fd0ec555d https://www.encodeproject.org/files/ENCFF061THL/@@download/ENCFF061THL.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF663MFK bam alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NKT, ENCFF643CGH 528175062 ENCODE Processing Pipeline 77b8bd3881ed7867e8990fc48dd923c4 https://www.encodeproject.org/files/ENCFF663MFK/@@download/ENCFF663MFK.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF667IDX bam alignments ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NKZ, ENCFF643CGH 979486542 ENCODE Processing Pipeline f8b0c94406051ed74ee01362c158d54b https://www.encodeproject.org/files/ENCFF667IDX/@@download/ENCFF667IDX.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF929LLW bigWig signal p-value ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100KVY, ENCFF279XQE, ENCFF477SJG 656532898 ENCODE Processing Pipeline 497bff02a0330b07ac576727c2d93c4f https://www.encodeproject.org/files/ENCFF929LLW/@@download/ENCFF929LLW.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF598COF bed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF100KVY, ENCFF279XQE 4158761 ENCODE Processing Pipeline 988c853ef62ae5c1b99a14b507211924 https://www.encodeproject.org/files/ENCFF598COF/@@download/ENCFF598COF.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF305MUT bed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100KVY, ENCFF279XQE, ENCFF477SJG 4572004 ENCODE Processing Pipeline 450792fc7595632f33bf0883e7576e5f https://www.encodeproject.org/files/ENCFF305MUT/@@download/ENCFF305MUT.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF102VPC bigWig signal p-value ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF279XQE, ENCFF477SJG 487946043 ENCODE Processing Pipeline d8ded3f47e922f95d5e83be79f5e7160 https://www.encodeproject.org/files/ENCFF102VPC/@@download/ENCFF102VPC.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF717RFU bigWig signal p-value ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF100KVY, ENCFF279XQE 630673707 ENCODE Processing Pipeline 691da48e347b00d9c49a4737de2d3bd3 https://www.encodeproject.org/files/ENCFF717RFU/@@download/ENCFF717RFU.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF101WYX bigWig fold change over control ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF279XQE, ENCFF477SJG 314804545 ENCODE Processing Pipeline 3b4b606f1a54c152b3b3045994b3d4ae https://www.encodeproject.org/files/ENCFF101WYX/@@download/ENCFF101WYX.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF152XNT bigWig fold change over control ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF100KVY, ENCFF279XQE 475211265 ENCODE Processing Pipeline b4aaf8ff9232c6ffae083122fa19b692 https://www.encodeproject.org/files/ENCFF152XNT/@@download/ENCFF152XNT.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF542MFI bed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF279XQE, ENCFF477SJG 4000778 ENCODE Processing Pipeline d6e6bfd129d3f8acce8ab9083367880e https://www.encodeproject.org/files/ENCFF542MFI/@@download/ENCFF542MFI.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF498CHL bigWig fold change over control ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100KVY, ENCFF279XQE, ENCFF477SJG 680146955 ENCODE Processing Pipeline ba0b80bb9a28659ff628591fa707faf4 https://www.encodeproject.org/files/ENCFF498CHL/@@download/ENCFF498CHL.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF380ESL bigBed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF598COF 10914782 ENCODE Processing Pipeline 8dc80269a2a860d15f9a3bd3c40f2877 https://www.encodeproject.org/files/ENCFF380ESL/@@download/ENCFF380ESL.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF753SIW bigBed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF305MUT 11267110 ENCODE Processing Pipeline 4b46a6f9f6222b85052426bfe43f37d7 https://www.encodeproject.org/files/ENCFF753SIW/@@download/ENCFF753SIW.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF296XCF bed narrowPeak optimal idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF305MUT, ENCFF542MFI, ENCFF598COF 383004 ENCODE Processing Pipeline c426eb3fba59c258c551f1b9197e8079 https://www.encodeproject.org/files/ENCFF296XCF/@@download/ENCFF296XCF.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF297FDK bed narrowPeak conservative idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF305MUT, ENCFF542MFI, ENCFF598COF 375692 ENCODE Processing Pipeline 8a1a7e9f7d68905a1d24878c6f6f1110 https://www.encodeproject.org/files/ENCFF297FDK/@@download/ENCFF297FDK.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF269BZX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF297FDK 594682 ENCODE Processing Pipeline 8372c6c63c094840cfd759f8ea882a97 https://www.encodeproject.org/files/ENCFF269BZX/@@download/ENCFF269BZX.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF168WOX bigBed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF542MFI 8531056 ENCODE Processing Pipeline 9572e1ebffe6aa92775fdfa92a7ba7da https://www.encodeproject.org/files/ENCFF168WOX/@@download/ENCFF168WOX.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF601ODU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF296XCF 603120 ENCODE Processing Pipeline a4788c3f1d16f3e1043c445e941f81e7 https://www.encodeproject.org/files/ENCFF601ODU/@@download/ENCFF601ODU.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF992ZMC bigWig fold change over control ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF016HFH, ENCFF663MFK, ENCFF667IDX 676096666 ENCODE Processing Pipeline e23be1c76f8c2f7543a2c30397ada2e9 https://www.encodeproject.org/files/ENCFF992ZMC/@@download/ENCFF992ZMC.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF714BUH bigBed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF229TMK 10915586 ENCODE Processing Pipeline 9ddfc61b61cbc8354cc2dfc74a485b72 https://www.encodeproject.org/files/ENCFF714BUH/@@download/ENCFF714BUH.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF229TMK bed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF016HFH, ENCFF667IDX 4152869 ENCODE Processing Pipeline ae649a9d6d59241f213890eeb7b51664 https://www.encodeproject.org/files/ENCFF229TMK/@@download/ENCFF229TMK.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF772DAQ bigWig fold change over control ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF016HFH, ENCFF667IDX 465652197 ENCODE Processing Pipeline 18a86a9f138abd69db42cd640bcc9681 https://www.encodeproject.org/files/ENCFF772DAQ/@@download/ENCFF772DAQ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF718PVF bigBed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF379DAN 11259116 ENCODE Processing Pipeline 9066f16f2d8e443dbacd9b8ea1e0c56b https://www.encodeproject.org/files/ENCFF718PVF/@@download/ENCFF718PVF.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF834ZLG bigWig signal p-value ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF016HFH, ENCFF667IDX 529338119 ENCODE Processing Pipeline c43fb61851083786032cf5d573e0788b https://www.encodeproject.org/files/ENCFF834ZLG/@@download/ENCFF834ZLG.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF225DGN bigWig fold change over control ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF016HFH, ENCFF663MFK 315667734 ENCODE Processing Pipeline babacc8986b38ec2e243735e0f7a441c https://www.encodeproject.org/files/ENCFF225DGN/@@download/ENCFF225DGN.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF379DAN bed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF016HFH, ENCFF663MFK, ENCFF667IDX 4553686 ENCODE Processing Pipeline 5688fe449b393c3e3c9963864accea31 https://www.encodeproject.org/files/ENCFF379DAN/@@download/ENCFF379DAN.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF675JJV bed narrowPeak optimal idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF229TMK, ENCFF334BVY, ENCFF379DAN, ENCFF419RSJ 376046 ENCODE Processing Pipeline 40ae1ffef08368ab94dc4018e8e74904 https://www.encodeproject.org/files/ENCFF675JJV/@@download/ENCFF675JJV.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF100KEW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF899FIQ 589027 ENCODE Processing Pipeline 15e099142f0123095c6f6eed2538fac1 https://www.encodeproject.org/files/ENCFF100KEW/@@download/ENCFF100KEW.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF359MJN bigWig signal p-value ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF016HFH, ENCFF663MFK 456708354 ENCODE Processing Pipeline 64417321f81d3da1db774141399229b4 https://www.encodeproject.org/files/ENCFF359MJN/@@download/ENCFF359MJN.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF205JYD bigWig signal p-value ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF016HFH, ENCFF663MFK, ENCFF667IDX 652520931 ENCODE Processing Pipeline 3c39850f9650cbf4cd594e2956a0d811 https://www.encodeproject.org/files/ENCFF205JYD/@@download/ENCFF205JYD.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF334BVY bed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF016HFH, ENCFF663MFK 3996228 ENCODE Processing Pipeline 18f7da30e55e49558d9946971bfa7c92 https://www.encodeproject.org/files/ENCFF334BVY/@@download/ENCFF334BVY.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF135BGG bigBed narrowPeak peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF334BVY 8532270 ENCODE Processing Pipeline d2ed86aab5cfd281ec8e226c57f22c3b https://www.encodeproject.org/files/ENCFF135BGG/@@download/ENCFF135BGG.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF899FIQ bed narrowPeak conservative idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF229TMK, ENCFF334BVY, ENCFF379DAN, ENCFF419RSJ 371869 ENCODE Processing Pipeline 83ff94167063cb12ad18bcc4b60bc110 https://www.encodeproject.org/files/ENCFF899FIQ/@@download/ENCFF899FIQ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF519XLO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQE ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF675JJV 594554 ENCODE Processing Pipeline 2309ae0fe0b0958b282a3dfd37d648f8 https://www.encodeproject.org/files/ENCFF519XLO/@@download/ENCFF519XLO.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF182FSV fastq reads ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 1 50 single-ended 1728361818 Richard Myers, HAIB 5f216a8a4959c745a685addd1f750e04 SRA:SRR5338582 https://www.encodeproject.org/files/ENCFF182FSV/@@download/ENCFF182FSV.fastq.gz HiSeq 2000 /files/ENCFF123QZN/ released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF264HRE fastq reads ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 1 50 single-ended 758986366 Richard Myers, HAIB f0e8919d2f6159f5fe0c394a5d90637c SRA:SRR5338581 https://www.encodeproject.org/files/ENCFF264HRE/@@download/ENCFF264HRE.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF994LTR bam alignments ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 50 ENCFF182FSV, ENCFF807MUK 1311840450 ENCODE Processing Pipeline 44693baf46b096f7272e14182884f8a1 https://www.encodeproject.org/files/ENCFF994LTR/@@download/ENCFF994LTR.bam hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF812LHP bam alignments ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 50 ENCFF264HRE, ENCFF807MUK 638929566 ENCODE Processing Pipeline 6fdc7e9c91f6bfb71e6fc705069db679 https://www.encodeproject.org/files/ENCFF812LHP/@@download/ENCFF812LHP.bam hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF079NNQ bigWig signal p-value ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 ENCFF200LFK, ENCFF321UJV, ENCFF994LTR 930687673 ENCODE Processing Pipeline 07d035acd5ca92c41a7dab10953e21c3 https://www.encodeproject.org/files/ENCFF079NNQ/@@download/ENCFF079NNQ.bigWig hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF273KXA bigWig signal p-value ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF200LFK, ENCFF321UJV, ENCFF812LHP, ENCFF994LTR 1087394845 ENCODE Processing Pipeline 1d49886b1a83bb5fa1710f54ea6e5bad https://www.encodeproject.org/files/ENCFF273KXA/@@download/ENCFF273KXA.bigWig hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF156KWH bigWig fold change over control ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 ENCFF200LFK, ENCFF321UJV, ENCFF994LTR 846313788 ENCODE Processing Pipeline 8aefe1584d423547c6aa672e5fbe99ad https://www.encodeproject.org/files/ENCFF156KWH/@@download/ENCFF156KWH.bigWig hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF832ZSJ bigWig signal p-value ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 ENCFF200LFK, ENCFF321UJV, ENCFF812LHP 732473344 ENCODE Processing Pipeline 7e69e49e405c006dd2674c5d59771381 https://www.encodeproject.org/files/ENCFF832ZSJ/@@download/ENCFF832ZSJ.bigWig hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF923QKQ bigWig fold change over control ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 ENCFF200LFK, ENCFF321UJV, ENCFF812LHP 574013340 ENCODE Processing Pipeline e245f365764089e2161225555c0a0ed0 https://www.encodeproject.org/files/ENCFF923QKQ/@@download/ENCFF923QKQ.bigWig hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF972IHG bigWig fold change over control ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF200LFK, ENCFF321UJV, ENCFF812LHP, ENCFF994LTR 1101790805 ENCODE Processing Pipeline 50b3678df723b7decc85ff2e136ba18f https://www.encodeproject.org/files/ENCFF972IHG/@@download/ENCFF972IHG.bigWig hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF495GMC bed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF200LFK, ENCFF321UJV, ENCFF812LHP, ENCFF994LTR 6844457 ENCODE Processing Pipeline 88f3349d5f6ab36c33d1b429dcac3f86 https://www.encodeproject.org/files/ENCFF495GMC/@@download/ENCFF495GMC.bed.gz hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF658HKF bigBed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 ENCFF150BYS 13448183 ENCODE Processing Pipeline 7063e519bfae5a555a4024bdaf544961 https://www.encodeproject.org/files/ENCFF658HKF/@@download/ENCFF658HKF.bigBed hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF742DVI bigBed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF495GMC 13544136 ENCODE Processing Pipeline 8cdf291f37aadf20b5f7529cc7708376 https://www.encodeproject.org/files/ENCFF742DVI/@@download/ENCFF742DVI.bigBed hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF150BYS bed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 ENCFF200LFK, ENCFF321UJV, ENCFF812LHP 6089239 ENCODE Processing Pipeline a57b3bdcaa277249137b0364c06f5fe0 https://www.encodeproject.org/files/ENCFF150BYS/@@download/ENCFF150BYS.bed.gz hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF775AMH bed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 ENCFF200LFK, ENCFF321UJV, ENCFF994LTR 6419949 ENCODE Processing Pipeline 426b4aad5128d4f275f3ab001bb35a13 https://www.encodeproject.org/files/ENCFF775AMH/@@download/ENCFF775AMH.bed.gz hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF639OVD bigBed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 ENCFF775AMH 13624628 ENCODE Processing Pipeline a137cc4074e26792efe4a515b4fb9fbb https://www.encodeproject.org/files/ENCFF639OVD/@@download/ENCFF639OVD.bigBed hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF153WUK bam unfiltered alignments ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 50 ENCFF264HRE, ENCFF643CGH 844912358 ENCODE Processing Pipeline 91a77b51ce0cbd2c549adab6429a2bd8 https://www.encodeproject.org/files/ENCFF153WUK/@@download/ENCFF153WUK.bam GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF222VHU bam unfiltered alignments ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 50 ENCFF182FSV, ENCFF643CGH 1865032750 ENCODE Processing Pipeline 96f6651a0b51acfdfee858d56f3bc2e8 https://www.encodeproject.org/files/ENCFF222VHU/@@download/ENCFF222VHU.bam GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF233KNQ bam alignments ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 50 ENCFF264HRE, ENCFF643CGH 638863160 ENCODE Processing Pipeline 1ab5e52241b8b2af7918e6f1f059a7c6 https://www.encodeproject.org/files/ENCFF233KNQ/@@download/ENCFF233KNQ.bam GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF490SKM bam alignments ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 50 ENCFF182FSV, ENCFF643CGH 1311917228 ENCODE Processing Pipeline 0c4946d8815afb610add8a93c401ef58 https://www.encodeproject.org/files/ENCFF490SKM/@@download/ENCFF490SKM.bam GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF170UAC bigWig signal p-value ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 ENCFF337WHA, ENCFF490SKM, ENCFF610PNU 997984476 ENCODE Processing Pipeline 71c15f4d6dfa20f542132fcd20c45085 https://www.encodeproject.org/files/ENCFF170UAC/@@download/ENCFF170UAC.bigWig GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF972EEX bigWig signal p-value ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 ENCFF233KNQ, ENCFF337WHA, ENCFF610PNU 800739160 ENCODE Processing Pipeline b234910b06559f6a525294976e2f56d6 https://www.encodeproject.org/files/ENCFF972EEX/@@download/ENCFF972EEX.bigWig GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF453DYR bigWig signal p-value ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF233KNQ, ENCFF337WHA, ENCFF490SKM, ENCFF610PNU 1129410606 ENCODE Processing Pipeline e7aebaefd0e0ceb8de040383d55a793b https://www.encodeproject.org/files/ENCFF453DYR/@@download/ENCFF453DYR.bigWig GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF582KYV bigWig fold change over control ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 ENCFF337WHA, ENCFF490SKM, ENCFF610PNU 840598980 ENCODE Processing Pipeline 5a28f9622115aca21121432090885bd5 https://www.encodeproject.org/files/ENCFF582KYV/@@download/ENCFF582KYV.bigWig GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF363ACC bigWig fold change over control ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF233KNQ, ENCFF337WHA, ENCFF490SKM, ENCFF610PNU 1104287485 ENCODE Processing Pipeline 69b4ce196076256e9ff90a52c96c6da7 https://www.encodeproject.org/files/ENCFF363ACC/@@download/ENCFF363ACC.bigWig GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF161FYB bigWig fold change over control ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 ENCFF233KNQ, ENCFF337WHA, ENCFF610PNU 571321956 ENCODE Processing Pipeline 492c2b2b620ec775cdd346079b900303 https://www.encodeproject.org/files/ENCFF161FYB/@@download/ENCFF161FYB.bigWig GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF200LDF bed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 ENCFF233KNQ, ENCFF337WHA, ENCFF610PNU 5931350 ENCODE Processing Pipeline 82196295799dc523fddfac075579d848 https://www.encodeproject.org/files/ENCFF200LDF/@@download/ENCFF200LDF.bed.gz GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF243CQL bed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF233KNQ, ENCFF337WHA, ENCFF490SKM, ENCFF610PNU 6704003 ENCODE Processing Pipeline 0ef99f66cc7e06f007cf4538ee664f2a https://www.encodeproject.org/files/ENCFF243CQL/@@download/ENCFF243CQL.bed.gz GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF467WAZ bed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 ENCFF337WHA, ENCFF490SKM, ENCFF610PNU 6220716 ENCODE Processing Pipeline fa250fd02311b642f94a4802ec6c02f5 https://www.encodeproject.org/files/ENCFF467WAZ/@@download/ENCFF467WAZ.bed.gz GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF589EYI bigBed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1 ENCFF467WAZ 13622954 ENCODE Processing Pipeline 62f83ab37c0e2ab33ac39ea9f710dfaf https://www.encodeproject.org/files/ENCFF589EYI/@@download/ENCFF589EYI.bigBed GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF239PUQ bigBed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF243CQL 13542565 ENCODE Processing Pipeline 68d08e30cf245d654da91f9621569f1d https://www.encodeproject.org/files/ENCFF239PUQ/@@download/ENCFF239PUQ.bigBed GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF904AXV bigBed narrowPeak peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 2 ENCFF200LDF 13432206 ENCODE Processing Pipeline 056fc9a4b1dcebc0c7764617ffdc03cb https://www.encodeproject.org/files/ENCFF904AXV/@@download/ENCFF904AXV.bigBed GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF606DWB bed narrowPeak conservative idr thresholded peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF200LDF, ENCFF243CQL, ENCFF419RSJ, ENCFF467WAZ 477266 ENCODE Processing Pipeline 2da442df8d816ae60b96864c5e34ab0d https://www.encodeproject.org/files/ENCFF606DWB/@@download/ENCFF606DWB.bed.gz GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF119ESN bigBed narrowPeak optimal idr thresholded peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF379TVQ 1012984 ENCODE Processing Pipeline 0dd3d5fed30ea391023a794ae5c22a4f https://www.encodeproject.org/files/ENCFF119ESN/@@download/ENCFF119ESN.bigBed GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF840VZC bigBed narrowPeak conservative idr thresholded peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF606DWB 969721 ENCODE Processing Pipeline a524bf5fe3eb4add2f1093ef765435b9 https://www.encodeproject.org/files/ENCFF840VZC/@@download/ENCFF840VZC.bigBed GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF379TVQ bed narrowPeak optimal idr thresholded peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF200LDF, ENCFF243CQL, ENCFF419RSJ, ENCFF467WAZ 504166 ENCODE Processing Pipeline 84257dd5ce7c1cfe6c380d53b1990ecc https://www.encodeproject.org/files/ENCFF379TVQ/@@download/ENCFF379TVQ.bed.gz GRCh38 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF957ONP bigBed narrowPeak conservative idr thresholded peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF014JMW 699386 ENCODE Processing Pipeline f903dde0a38c8e1123be9d7e212b1448 https://www.encodeproject.org/files/ENCFF957ONP/@@download/ENCFF957ONP.bigBed hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF014JMW bed narrowPeak conservative idr thresholded peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF150BYS, ENCFF495GMC, ENCFF775AMH 416270 ENCODE Processing Pipeline 7006249754a96b374c24f4d92145246a https://www.encodeproject.org/files/ENCFF014JMW/@@download/ENCFF014JMW.bed.gz hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF367GXC bigBed narrowPeak optimal idr thresholded peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF133YMX 715335 ENCODE Processing Pipeline 3eaafab53dc5e3b97283da3c2801b2df https://www.encodeproject.org/files/ENCFF367GXC/@@download/ENCFF367GXC.bigBed hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF133YMX bed narrowPeak optimal idr thresholded peaks ENCSR338MMB ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens NR2F2-human ENCAB000AJH DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF150BYS, ENCFF495GMC, ENCFF775AMH 428177 ENCODE Processing Pipeline a5fe216065e927a3391b4d54d418aa78 https://www.encodeproject.org/files/ENCFF133YMX/@@download/ENCFF133YMX.bed.gz hg19 released antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000OPG bam alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OPS 910562513 Richard Myers, HAIB a7397181415c5b37dfa8546f107ab574 https://www.encodeproject.org/files/ENCFF000OPG/@@download/ENCFF000OPG.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF000OPH bigBed broadPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBM 131785 Richard Myers, HAIB 773cfa60d71f1cb1a58b6d4ba0c4330d https://www.encodeproject.org/files/ENCFF000OPH/@@download/ENCFF000OPH.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF000OPI bigBed broadPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBN 493825 Richard Myers, HAIB 39d78b4ea7cc1110b33214014c8be8db https://www.encodeproject.org/files/ENCFF000OPI/@@download/ENCFF000OPI.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF000OPJ bam alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OPZ 1898667075 Richard Myers, HAIB 78e0d592667a8ebfd527a3998ed14b2b https://www.encodeproject.org/files/ENCFF000OPJ/@@download/ENCFF000OPJ.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF000OPM bigWig raw signal ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 1 5129675 Richard Myers, HAIB d4bad746848e26f8ca400019a57018ca https://www.encodeproject.org/files/ENCFF000OPM/@@download/ENCFF000OPM.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF000OPN bigWig raw signal ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 1 68193619 Richard Myers, HAIB 16882f188b2dfaee8422685946ef518c https://www.encodeproject.org/files/ENCFF000OPN/@@download/ENCFF000OPN.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF000OPS fastq reads ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 786300290 Richard Myers, HAIB a332549fbaa94bf298fd8f4445d6cbcd https://www.encodeproject.org/files/ENCFF000OPS/@@download/ENCFF000OPS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF000OPZ fastq reads ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 2697949103 Richard Myers, HAIB 56a854f4f63d5ab5c7ad6fd69c5eacbe https://www.encodeproject.org/files/ENCFF000OPZ/@@download/ENCFF000OPZ.fastq.gz HiSeq 2000 /files/ENCFF000OSP/ released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF001UBM bed broadPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 1 63066 Richard Myers, HAIB 96484467e93183df045a4abd545ff9c7 https://www.encodeproject.org/files/ENCFF001UBM/@@download/ENCFF001UBM.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF001UBN bed broadPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 1 317584 Richard Myers, HAIB 8f228409b2c861f5cf0d2e52bc88178c https://www.encodeproject.org/files/ENCFF001UBN/@@download/ENCFF001UBN.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF002CIZ bed narrowPeak optimal idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 164218 ENCODE Consortium Analysis Working Group 1c0e5f009a39b207e74f525bcfd58e35 https://www.encodeproject.org/files/ENCFF002CIZ/@@download/ENCFF002CIZ.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF872ZQO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE ENCFF002CIZ 383526 ENCODE Consortium 7a462c665dc598052e99097bf4e9179c https://www.encodeproject.org/files/ENCFF872ZQO/@@download/ENCFF872ZQO.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF719SSA bam unfiltered alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPS, ENCFF643CGH 1072718963 ENCODE Processing Pipeline 16a303e914f2cfaf43c29823b0bcf517 https://www.encodeproject.org/files/ENCFF719SSA/@@download/ENCFF719SSA.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF015LMA bam alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPS, ENCFF643CGH 657514861 ENCODE Processing Pipeline 1a2bd6471c41754adc152c46bf5d3c52 https://www.encodeproject.org/files/ENCFF015LMA/@@download/ENCFF015LMA.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF889YQP bam alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPZ, ENCFF643CGH 735950096 ENCODE Processing Pipeline fc9f745b455a47e651e706655f20794e https://www.encodeproject.org/files/ENCFF889YQP/@@download/ENCFF889YQP.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF253UUS bam unfiltered alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPZ, ENCFF643CGH 3032859040 ENCODE Processing Pipeline 1c43004c8b2fe58c8b309d8fa02494f1 https://www.encodeproject.org/files/ENCFF253UUS/@@download/ENCFF253UUS.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF607MKO bam unfiltered alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPS, ENCFF807MUK 1068738329 ENCODE Processing Pipeline b38ae91be221ca6adaba737c7c02a147 https://www.encodeproject.org/files/ENCFF607MKO/@@download/ENCFF607MKO.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF255PIM bam alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPS, ENCFF807MUK 657938634 ENCODE Processing Pipeline dd979bff0c28be79c1c75eac4c244284 https://www.encodeproject.org/files/ENCFF255PIM/@@download/ENCFF255PIM.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF751AJC bam unfiltered alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPZ, ENCFF807MUK 3025900466 ENCODE Processing Pipeline f997cfc9de0288995cba17cf2fd65134 https://www.encodeproject.org/files/ENCFF751AJC/@@download/ENCFF751AJC.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF694EPR bam alignments ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPZ, ENCFF807MUK 736479403 ENCODE Processing Pipeline 0382220721ed84cc609fe8a2adbc0731 https://www.encodeproject.org/files/ENCFF694EPR/@@download/ENCFF694EPR.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF080RXO bigWig signal p-value ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015LMA, ENCFF948LKH 430776982 ENCODE Processing Pipeline 1e1a0618a17e0548d209da8fb1167525 https://www.encodeproject.org/files/ENCFF080RXO/@@download/ENCFF080RXO.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF133IVX bigWig signal p-value ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF889YQP, ENCFF948LKH 437831846 ENCODE Processing Pipeline f6d8962432c7c66b670bbf536dbe8a05 https://www.encodeproject.org/files/ENCFF133IVX/@@download/ENCFF133IVX.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF540SHL bigWig signal p-value ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015LMA, ENCFF889YQP, ENCFF948LKH 541982920 ENCODE Processing Pipeline 55f93e09700e7194a7ddd1d5813cddd1 https://www.encodeproject.org/files/ENCFF540SHL/@@download/ENCFF540SHL.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF655OWT bigWig fold change over control ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015LMA, ENCFF948LKH 365440862 ENCODE Processing Pipeline c232a79bdafb51140eda33163eb5d48e https://www.encodeproject.org/files/ENCFF655OWT/@@download/ENCFF655OWT.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF790OJE bigWig fold change over control ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF889YQP, ENCFF948LKH 304860525 ENCODE Processing Pipeline 9a7fc8e34138b78104b6ef6baeee5386 https://www.encodeproject.org/files/ENCFF790OJE/@@download/ENCFF790OJE.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF128BVN bigWig fold change over control ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015LMA, ENCFF889YQP, ENCFF948LKH 575967083 ENCODE Processing Pipeline fa8b1b7122ec2a9da8f8b5c3fd06277a https://www.encodeproject.org/files/ENCFF128BVN/@@download/ENCFF128BVN.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF497ZVG bed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF889YQP, ENCFF948LKH 4628032 ENCODE Processing Pipeline b8f21a894d1064e6aa8e4bc737fa2af6 https://www.encodeproject.org/files/ENCFF497ZVG/@@download/ENCFF497ZVG.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF476DXW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF093TYW 308696 ENCODE Processing Pipeline 6c37fe66a3c62133ff8a69a8b8fe4d9e https://www.encodeproject.org/files/ENCFF476DXW/@@download/ENCFF476DXW.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF017EIV bigBed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF053GZV 8567593 ENCODE Processing Pipeline 17d1920f5b0f4939f9e3af960461ce5f https://www.encodeproject.org/files/ENCFF017EIV/@@download/ENCFF017EIV.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF060XJS bigBed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF122MRV 11383074 ENCODE Processing Pipeline a8a3cdac3a9f440a9cc463f9890486d5 https://www.encodeproject.org/files/ENCFF060XJS/@@download/ENCFF060XJS.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF093TYW bed narrowPeak conservative idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF053GZV, ENCFF122MRV, ENCFF419RSJ, ENCFF497ZVG 161042 ENCODE Processing Pipeline 4af9ae6bdc9ff79c8cbd33f11546c66a https://www.encodeproject.org/files/ENCFF093TYW/@@download/ENCFF093TYW.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF050FWD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF646IUA 505475 ENCODE Processing Pipeline 4958edcdece8527eb343ec38e4356cb7 https://www.encodeproject.org/files/ENCFF050FWD/@@download/ENCFF050FWD.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF122MRV bed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015LMA, ENCFF889YQP, ENCFF948LKH 5268168 ENCODE Processing Pipeline 706ee13ee1072e1370d84e17824754f1 https://www.encodeproject.org/files/ENCFF122MRV/@@download/ENCFF122MRV.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF646IUA bed narrowPeak optimal idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF053GZV, ENCFF122MRV, ENCFF419RSJ, ENCFF497ZVG 248403 ENCODE Processing Pipeline 4e5987a810e7796cf5e42c219da30108 https://www.encodeproject.org/files/ENCFF646IUA/@@download/ENCFF646IUA.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF053GZV bed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015LMA, ENCFF948LKH 4033523 ENCODE Processing Pipeline 0ad1fcdc31b3884215a80c9e3e6bab82 https://www.encodeproject.org/files/ENCFF053GZV/@@download/ENCFF053GZV.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF851RMZ bigBed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF497ZVG 10762475 ENCODE Processing Pipeline e38def96e12d055baed45cae03ff087d https://www.encodeproject.org/files/ENCFF851RMZ/@@download/ENCFF851RMZ.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF558CUU bigWig fold change over control ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF694EPR 307983736 ENCODE Processing Pipeline 8c9a2170465274d87c8b6ed0a55bce83 https://www.encodeproject.org/files/ENCFF558CUU/@@download/ENCFF558CUU.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF072NXZ bigWig signal p-value ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF255PIM, ENCFF356DXM 469131492 ENCODE Processing Pipeline 67a5c57e395cdf157dbf9f7c56a0e7d8 https://www.encodeproject.org/files/ENCFF072NXZ/@@download/ENCFF072NXZ.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF575JCN bigWig fold change over control ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF255PIM, ENCFF356DXM, ENCFF694EPR 588720130 ENCODE Processing Pipeline c3d47af0ce764338648f939bf46c4284 https://www.encodeproject.org/files/ENCFF575JCN/@@download/ENCFF575JCN.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF686SJD bed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF255PIM, ENCFF356DXM 4137913 ENCODE Processing Pipeline e03796a634f2dca9d97626146b10d083 https://www.encodeproject.org/files/ENCFF686SJD/@@download/ENCFF686SJD.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF808AGO bigBed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF905FMJ 10759871 ENCODE Processing Pipeline 5dbd66f10e3802a102c90215d5df040d https://www.encodeproject.org/files/ENCFF808AGO/@@download/ENCFF808AGO.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF959ZEX bigWig fold change over control ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF255PIM, ENCFF356DXM 362010222 ENCODE Processing Pipeline 2b3852266b20086f97d6ca551b016f1e https://www.encodeproject.org/files/ENCFF959ZEX/@@download/ENCFF959ZEX.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF871SXX bigWig signal p-value ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF694EPR 427174005 ENCODE Processing Pipeline 1b4e19e5f21ff063ff4afc52c2dd84c3 https://www.encodeproject.org/files/ENCFF871SXX/@@download/ENCFF871SXX.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF331LHC bigBed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041GFP 11376078 ENCODE Processing Pipeline 46cb25fe4ac557e132812fecdd86e3f8 https://www.encodeproject.org/files/ENCFF331LHC/@@download/ENCFF331LHC.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF250TYY bigWig signal p-value ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF255PIM, ENCFF356DXM, ENCFF694EPR 553137019 ENCODE Processing Pipeline ba4ea31fa4a006c7d5e9d616a81486f2 https://www.encodeproject.org/files/ENCFF250TYY/@@download/ENCFF250TYY.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF905FMJ bed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF694EPR 4633715 ENCODE Processing Pipeline e9b1b628efd91bd2cf068be3eab1e568 https://www.encodeproject.org/files/ENCFF905FMJ/@@download/ENCFF905FMJ.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF041GFP bed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF255PIM, ENCFF356DXM, ENCFF694EPR 5330461 ENCODE Processing Pipeline b6d79920d44df8b205ce83dfb88332f8 https://www.encodeproject.org/files/ENCFF041GFP/@@download/ENCFF041GFP.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF791JCL bigBed narrowPeak peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1 ENCFF686SJD 10553010 ENCODE Processing Pipeline 194e60121b6a9bd23c96470c1780fd27 https://www.encodeproject.org/files/ENCFF791JCL/@@download/ENCFF791JCL.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF073PCP bed narrowPeak optimal idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF041GFP, ENCFF686SJD, ENCFF905FMJ 258230 ENCODE Processing Pipeline 009fcd86b3b4d6d1e42350f2b7f87273 https://www.encodeproject.org/files/ENCFF073PCP/@@download/ENCFF073PCP.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF137OPQ bed narrowPeak conservative idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF041GFP, ENCFF686SJD, ENCFF905FMJ 162224 ENCODE Processing Pipeline d24812c3c1aabacaa473b058a79d058c https://www.encodeproject.org/files/ENCFF137OPQ/@@download/ENCFF137OPQ.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF843TQG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF137OPQ 301820 ENCODE Processing Pipeline 1a90dd33095fdfcab9c8ec83e06a003e https://www.encodeproject.org/files/ENCFF843TQG/@@download/ENCFF843TQG.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF215HQZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF073PCP 510330 ENCODE Processing Pipeline 3d2d5179567a43860315213d4aa0275c https://www.encodeproject.org/files/ENCFF215HQZ/@@download/ENCFF215HQZ.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample severe bottlenecking, poor library complexity ENCFF000NDL bam alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NDY 1792031318 Richard Myers, HAIB aebc22e2ba05c2fafb495bd56c713c35 https://www.encodeproject.org/files/ENCFF000NDL/@@download/ENCFF000NDL.bam hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NDM bam alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NDV 1386114589 Richard Myers, HAIB 836a95ce3cb276961ac3f03917cd7345 https://www.encodeproject.org/files/ENCFF000NDM/@@download/ENCFF000NDM.bam hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NDN bigBed broadPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TSZ 495978 Richard Myers, HAIB 9e8c74b5adc0123c951103d8156ac480 https://www.encodeproject.org/files/ENCFF000NDN/@@download/ENCFF000NDN.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NDO bigBed broadPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TTA 567143 Richard Myers, HAIB 0f5f520fc231ac7c46cd7016c7fab9d1 https://www.encodeproject.org/files/ENCFF000NDO/@@download/ENCFF000NDO.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NDQ bigWig raw signal ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 19634690 Richard Myers, HAIB 63032dd490ce3329c29862bf74089831 https://www.encodeproject.org/files/ENCFF000NDQ/@@download/ENCFF000NDQ.bigWig hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NDR bigWig raw signal ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 26369750 Richard Myers, HAIB 3447a29dfc4271872e8f466447b5cbf7 https://www.encodeproject.org/files/ENCFF000NDR/@@download/ENCFF000NDR.bigWig hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NDV fastq reads ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1377492162 Richard Myers, HAIB 83165aea9255779bfde44a17cc100e9b https://www.encodeproject.org/files/ENCFF000NDV/@@download/ENCFF000NDV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NDY fastq reads ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1770508114 Richard Myers, HAIB 8a903086a7e9b5045f1b785807c86e5e https://www.encodeproject.org/files/ENCFF000NDY/@@download/ENCFF000NDY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TSZ bed broadPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 274175 Richard Myers, HAIB d6a3e565cdcee5690851a67182e65e99 https://www.encodeproject.org/files/ENCFF001TSZ/@@download/ENCFF001TSZ.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TTA bed broadPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 371350 Richard Myers, HAIB 71b39f80cbeff8329cec172a56e94b65 https://www.encodeproject.org/files/ENCFF001TTA/@@download/ENCFF001TTA.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CFU bed narrowPeak optimal idr thresholded peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 277807 ENCODE Consortium Analysis Working Group 76aa22412831088c081ae5917f94bc40 https://www.encodeproject.org/files/ENCFF002CFU/@@download/ENCFF002CFU.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF819CLC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE ENCFF002CFU 745479 ENCODE Consortium 8d0f246c1a36fb55de2b02221106f261 https://www.encodeproject.org/files/ENCFF819CLC/@@download/ENCFF819CLC.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF060SLW bam unfiltered alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NDV, ENCFF643CGH 1507800157 ENCODE Processing Pipeline 9c781be5120833603936d173042318b3 https://www.encodeproject.org/files/ENCFF060SLW/@@download/ENCFF060SLW.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF653BQI bam alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NDV, ENCFF643CGH 933551952 ENCODE Processing Pipeline 5d59234e2814a3c33ecbb66a562f0ee2 https://www.encodeproject.org/files/ENCFF653BQI/@@download/ENCFF653BQI.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF807YWR bam alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NDY, ENCFF643CGH 1138641488 ENCODE Processing Pipeline f893dd1d087a8a8aab83be6e85c629da https://www.encodeproject.org/files/ENCFF807YWR/@@download/ENCFF807YWR.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF561WPG bam unfiltered alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NDY, ENCFF643CGH 1952268381 ENCODE Processing Pipeline d3c77a0caa0234c88b1251c7df560612 https://www.encodeproject.org/files/ENCFF561WPG/@@download/ENCFF561WPG.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF867TSI bam unfiltered alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NDV, ENCFF807MUK 1503598550 ENCODE Processing Pipeline 513fe3eec7087efc995d270c362bfee5 https://www.encodeproject.org/files/ENCFF867TSI/@@download/ENCFF867TSI.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF507FFE bam unfiltered alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NDY, ENCFF807MUK 1947115166 ENCODE Processing Pipeline d5cd6de8bb5c2b3cc441ad23b21a7a69 https://www.encodeproject.org/files/ENCFF507FFE/@@download/ENCFF507FFE.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF515SHZ bam alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NDV, ENCFF807MUK 933678255 ENCODE Processing Pipeline 0eca7e4443808e2f73c31ad8b6233229 https://www.encodeproject.org/files/ENCFF515SHZ/@@download/ENCFF515SHZ.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF158ZUT bam alignments ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NDY, ENCFF807MUK 1138681082 ENCODE Processing Pipeline 51caa14cb784fefdea94cc8e2ca503bf https://www.encodeproject.org/files/ENCFF158ZUT/@@download/ENCFF158ZUT.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF834RBT bigWig signal p-value ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF807YWR 611133588 ENCODE Processing Pipeline d3843a007abd33fb1e62811761db5ab9 https://www.encodeproject.org/files/ENCFF834RBT/@@download/ENCFF834RBT.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF057XTI bigWig signal p-value ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF653BQI, ENCFF656HEF 677216246 ENCODE Processing Pipeline 7826611a33524b9f8d96fdcbc9f14ac2 https://www.encodeproject.org/files/ENCFF057XTI/@@download/ENCFF057XTI.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF892ZLP bigWig fold change over control ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF807YWR 544543056 ENCODE Processing Pipeline fe6e4aee50e11f3f592228e36523929f https://www.encodeproject.org/files/ENCFF892ZLP/@@download/ENCFF892ZLP.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF961EXG bigWig signal p-value ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF653BQI, ENCFF656HEF, ENCFF807YWR 840694966 ENCODE Processing Pipeline 4faf47d1b33eff191be2bf070536ee54 https://www.encodeproject.org/files/ENCFF961EXG/@@download/ENCFF961EXG.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF838YIE bigWig fold change over control ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF653BQI, ENCFF656HEF 542714469 ENCODE Processing Pipeline 713796a4f95ecb98fa3f1f2ddb5c019c https://www.encodeproject.org/files/ENCFF838YIE/@@download/ENCFF838YIE.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF355REQ bigWig fold change over control ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF653BQI, ENCFF656HEF, ENCFF807YWR 882440251 ENCODE Processing Pipeline 413d399c67c48040f184b38f58e81166 https://www.encodeproject.org/files/ENCFF355REQ/@@download/ENCFF355REQ.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF890YST bed narrowPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF807YWR 6295151 ENCODE Processing Pipeline cf99b6c92ffa76cbfb9c1da9a174c1fe https://www.encodeproject.org/files/ENCFF890YST/@@download/ENCFF890YST.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF411JQN bed narrowPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF653BQI, ENCFF656HEF 6571089 ENCODE Processing Pipeline 5b8ea49fc4b3984173d70736417a2c32 https://www.encodeproject.org/files/ENCFF411JQN/@@download/ENCFF411JQN.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF102BMN bed narrowPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF653BQI, ENCFF656HEF, ENCFF807YWR 7030405 ENCODE Processing Pipeline 7f8482cde84ecbc1acbc64cb8b990848 https://www.encodeproject.org/files/ENCFF102BMN/@@download/ENCFF102BMN.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF122WOY bigBed narrowPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF411JQN 12725304 ENCODE Processing Pipeline 6780440536fe562b700d4a0970e91412 https://www.encodeproject.org/files/ENCFF122WOY/@@download/ENCFF122WOY.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF107EWI bed narrowPeak optimal idr thresholded peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF102BMN, ENCFF411JQN, ENCFF419RSJ, ENCFF890YST 344851 ENCODE Processing Pipeline bb704226429809f98a724c8b959895be https://www.encodeproject.org/files/ENCFF107EWI/@@download/ENCFF107EWI.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF978XAD bigBed narrowPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF890YST 12993453 ENCODE Processing Pipeline a6d99d23b9b7dab81839d97e47b26cd3 https://www.encodeproject.org/files/ENCFF978XAD/@@download/ENCFF978XAD.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF929GSB bigBed narrowPeak peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF102BMN 12824357 ENCODE Processing Pipeline 0d99787ad711bc476e20616a4f2f55d6 https://www.encodeproject.org/files/ENCFF929GSB/@@download/ENCFF929GSB.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF015OEW bed narrowPeak conservative idr thresholded peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF102BMN, ENCFF411JQN, ENCFF419RSJ, ENCFF890YST 285232 ENCODE Processing Pipeline d76767727b0f4d1613a74d957d579b9b https://www.encodeproject.org/files/ENCFF015OEW/@@download/ENCFF015OEW.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF654ZLS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF015OEW 653813 ENCODE Processing Pipeline a3c1090adf57c9d12a210e9399d149be https://www.encodeproject.org/files/ENCFF654ZLS/@@download/ENCFF654ZLS.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF780AQL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQP ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF107EWI 751133 ENCODE Processing Pipeline 735869a0bdf5264f55995c2f1667b9b3 https://www.encodeproject.org/files/ENCFF780AQL/@@download/ENCFF780AQL.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NBK bam alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NBZ 920208707 Richard Myers, HAIB 7d4cece49f3385d9bafb5e3039841848 https://www.encodeproject.org/files/ENCFF000NBK/@@download/ENCFF000NBK.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBN bigBed broadPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TSP 593169 Richard Myers, HAIB 36fbcc86f9784ca52a7bf4574ba37d5d https://www.encodeproject.org/files/ENCFF000NBN/@@download/ENCFF000NBN.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBO bigBed broadPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TSQ 553306 Richard Myers, HAIB 1ad9ccd3c815887a529b575c04c7ea61 https://www.encodeproject.org/files/ENCFF000NBO/@@download/ENCFF000NBO.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBP bam alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NBX 776956220 Richard Myers, HAIB b3c6573a073b1a0da54b3c859e6347ba https://www.encodeproject.org/files/ENCFF000NBP/@@download/ENCFF000NBP.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBQ bigWig raw signal ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 27201407 Richard Myers, HAIB f32640c8e7af3be9ce8a728ad4236a0b https://www.encodeproject.org/files/ENCFF000NBQ/@@download/ENCFF000NBQ.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NBS bigWig raw signal ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 23412689 Richard Myers, HAIB 9b0d753f6177c69af372a3e8ae7301ed https://www.encodeproject.org/files/ENCFF000NBS/@@download/ENCFF000NBS.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NBX fastq reads ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 764824803 Richard Myers, HAIB 0d09ba45cebbea8c358ca35f54c2a0b9 https://www.encodeproject.org/files/ENCFF000NBX/@@download/ENCFF000NBX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NCO/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBZ fastq reads ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 934035248 Richard Myers, HAIB 7a7a8b1190098b403c029c50687fdfe1 https://www.encodeproject.org/files/ENCFF000NBZ/@@download/ENCFF000NBZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NCL/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF001TSP bed broadPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 357327 Richard Myers, HAIB 726d4a747480a147749fd14e43647179 https://www.encodeproject.org/files/ENCFF001TSP/@@download/ENCFF001TSP.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TSQ bed broadPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 340835 Richard Myers, HAIB 18086c08c4ea41ac0c3794ff2c0bf4be https://www.encodeproject.org/files/ENCFF001TSQ/@@download/ENCFF001TSQ.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CFR bed narrowPeak optimal idr thresholded peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 569705 ENCODE Consortium Analysis Working Group 3c217e8778ef5e9e7a24ade03de7f67f https://www.encodeproject.org/files/ENCFF002CFR/@@download/ENCFF002CFR.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF451ZHC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE ENCFF002CFR 1306854 ENCODE Consortium ee005f7f54d94afcc3f4862b86f7a0c7 https://www.encodeproject.org/files/ENCFF451ZHC/@@download/ENCFF451ZHC.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF703HTN bam alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NBX, ENCFF643CGH 613343067 ENCODE Processing Pipeline f05d504b421a6d5ec37f49a3694124c3 https://www.encodeproject.org/files/ENCFF703HTN/@@download/ENCFF703HTN.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF384SJW bam unfiltered alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NBX, ENCFF643CGH 996202779 ENCODE Processing Pipeline c9236e88b12c214e0d7ce2b60b576798 https://www.encodeproject.org/files/ENCFF384SJW/@@download/ENCFF384SJW.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF007KKM bam unfiltered alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NBZ, ENCFF643CGH 1203433547 ENCODE Processing Pipeline e54447787ee36823a9129a43d769a126 https://www.encodeproject.org/files/ENCFF007KKM/@@download/ENCFF007KKM.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF599NFC bam alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NBZ, ENCFF643CGH 716736569 ENCODE Processing Pipeline 57b48a6cac317ae38edd4428d431d0d4 https://www.encodeproject.org/files/ENCFF599NFC/@@download/ENCFF599NFC.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF754YWA bam unfiltered alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NBZ, ENCFF807MUK 1199128156 ENCODE Processing Pipeline f77ea65999f92efa5dc1d3c8dfd17b24 https://www.encodeproject.org/files/ENCFF754YWA/@@download/ENCFF754YWA.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF933UZL bam alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NBX, ENCFF807MUK 613633405 ENCODE Processing Pipeline fac701699299207b0a5f233738f9b991 https://www.encodeproject.org/files/ENCFF933UZL/@@download/ENCFF933UZL.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF456TVS bam unfiltered alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NBX, ENCFF807MUK 993136988 ENCODE Processing Pipeline 1692a6144d7193970d09b62437935cf6 https://www.encodeproject.org/files/ENCFF456TVS/@@download/ENCFF456TVS.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF500MOX bam alignments ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NBZ, ENCFF807MUK 716939290 ENCODE Processing Pipeline 8503fa5b1a9345201d703389dd8fe477 https://www.encodeproject.org/files/ENCFF500MOX/@@download/ENCFF500MOX.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF321KAW bigWig signal p-value ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF599NFC 322563780 ENCODE Processing Pipeline dbee5fa1d70b3464b5ed79421724e847 https://www.encodeproject.org/files/ENCFF321KAW/@@download/ENCFF321KAW.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF162VQC bigWig signal p-value ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF703HTN 328067366 ENCODE Processing Pipeline b3378b8b8d413ec0deedb89b21b1a62d https://www.encodeproject.org/files/ENCFF162VQC/@@download/ENCFF162VQC.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF905AMR bigWig signal p-value ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF599NFC, ENCFF703HTN 608512865 ENCODE Processing Pipeline e39df3f08ba7e65def88e2b54ce01eea https://www.encodeproject.org/files/ENCFF905AMR/@@download/ENCFF905AMR.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF566LUA bigWig fold change over control ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF599NFC 276480260 ENCODE Processing Pipeline baae4f2344d8f59752db2fecb702caa9 https://www.encodeproject.org/files/ENCFF566LUA/@@download/ENCFF566LUA.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF296ALC bigWig fold change over control ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF703HTN 257763230 ENCODE Processing Pipeline 83608306862714efaa235a06d2a9ce1b https://www.encodeproject.org/files/ENCFF296ALC/@@download/ENCFF296ALC.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF370ILE bigWig fold change over control ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF599NFC, ENCFF703HTN 582096169 ENCODE Processing Pipeline f8caa497a4a29df89f2a03abd2d74def https://www.encodeproject.org/files/ENCFF370ILE/@@download/ENCFF370ILE.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF580WFC bed narrowPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF703HTN 4749628 ENCODE Processing Pipeline 457117e1c5da7f299540467447fde09b https://www.encodeproject.org/files/ENCFF580WFC/@@download/ENCFF580WFC.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF337SWA bed narrowPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF599NFC 4591712 ENCODE Processing Pipeline 5da92c122ef37cddbe5e01e212d16a24 https://www.encodeproject.org/files/ENCFF337SWA/@@download/ENCFF337SWA.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF059UCY bed narrowPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF599NFC, ENCFF703HTN 5927921 ENCODE Processing Pipeline e2e38b5cbf2c6958a989f82e28b671b1 https://www.encodeproject.org/files/ENCFF059UCY/@@download/ENCFF059UCY.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF280IGO bigBed narrowPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF337SWA 10629962 ENCODE Processing Pipeline b05677722f15ba8c09800b297da8ea82 https://www.encodeproject.org/files/ENCFF280IGO/@@download/ENCFF280IGO.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF799XWR bigBed narrowPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF059UCY 13497324 ENCODE Processing Pipeline eb1e4ae2f88acb9df73a50a3c02e8fa5 https://www.encodeproject.org/files/ENCFF799XWR/@@download/ENCFF799XWR.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF009APP bed narrowPeak conservative idr thresholded peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF059UCY, ENCFF337SWA, ENCFF419RSJ, ENCFF580WFC 421065 ENCODE Processing Pipeline afff983674109227e075447c71dc31f2 https://www.encodeproject.org/files/ENCFF009APP/@@download/ENCFF009APP.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF126PAU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF114SRD 976872 ENCODE Processing Pipeline dea505b25dbad07d1b259875a6a2f7c3 https://www.encodeproject.org/files/ENCFF126PAU/@@download/ENCFF126PAU.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF072YID bigBed narrowPeak peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF580WFC 10643327 ENCODE Processing Pipeline f131ff3851319c0c69dc2a0e62ade366 https://www.encodeproject.org/files/ENCFF072YID/@@download/ENCFF072YID.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF086KWZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF009APP 915013 ENCODE Processing Pipeline 93b0673274c8575c3674b97ba8319fd8 https://www.encodeproject.org/files/ENCFF086KWZ/@@download/ENCFF086KWZ.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF114SRD bed narrowPeak optimal idr thresholded peaks ENCSR000BHF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF059UCY, ENCFF337SWA, ENCFF419RSJ, ENCFF580WFC 458272 ENCODE Processing Pipeline fecc5b9d631697532c1dae94e75eaac4 https://www.encodeproject.org/files/ENCFF114SRD/@@download/ENCFF114SRD.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBC bam alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NBL 951568879 Richard Myers, HAIB 9169c1450c127c2ca64c2821808d73ba https://www.encodeproject.org/files/ENCFF000NBC/@@download/ENCFF000NBC.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBD bam alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NBR 731660025 Richard Myers, HAIB 4f350dff865c2c52fa1d01ccf92aeb0d https://www.encodeproject.org/files/ENCFF000NBD/@@download/ENCFF000NBD.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBE bigBed broadPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TSN 92964 Richard Myers, HAIB 2391a978215f9260fa0cf7baf3a767bf https://www.encodeproject.org/files/ENCFF000NBE/@@download/ENCFF000NBE.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBF bigBed broadPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TSO 62602 Richard Myers, HAIB 633845576f98e27a8080f919eb75c331 https://www.encodeproject.org/files/ENCFF000NBF/@@download/ENCFF000NBF.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBI bigWig raw signal ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 14093530 Richard Myers, HAIB 73755a10c3dfc61d3788ab8ef6b6a67b https://www.encodeproject.org/files/ENCFF000NBI/@@download/ENCFF000NBI.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NBJ bigWig raw signal ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 9742074 Richard Myers, HAIB 629fdfe8f1c10ce1c6d9a337aa380449 https://www.encodeproject.org/files/ENCFF000NBJ/@@download/ENCFF000NBJ.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NBL fastq reads ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 987699041 Richard Myers, HAIB b44fa20b452f4af8326bf7671850c14b https://www.encodeproject.org/files/ENCFF000NBL/@@download/ENCFF000NBL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NCL/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NBR fastq reads ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 754341186 Richard Myers, HAIB 14bdacdeb8fc867e19a5b548cec237ff https://www.encodeproject.org/files/ENCFF000NBR/@@download/ENCFF000NBR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NCO/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF001TSN bed broadPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 22642 Richard Myers, HAIB 2ba1bb5ab30d9e3fb4f423f75727221f https://www.encodeproject.org/files/ENCFF001TSN/@@download/ENCFF001TSN.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TSO bed broadPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 10863 Richard Myers, HAIB 197c1656cacc7f2cdccfa462a307d55b https://www.encodeproject.org/files/ENCFF001TSO/@@download/ENCFF001TSO.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CFQ bed narrowPeak optimal idr thresholded peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 28679 ENCODE Consortium Analysis Working Group 9e7323952052c92533c6411e299ea90a https://www.encodeproject.org/files/ENCFF002CFQ/@@download/ENCFF002CFQ.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF842IIM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE ENCFF002CFQ 156233 ENCODE Consortium f0eb5a470cda3254d72b3f149431de83 https://www.encodeproject.org/files/ENCFF842IIM/@@download/ENCFF842IIM.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF557CPW bam unfiltered alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NBR, ENCFF643CGH 990145460 ENCODE Processing Pipeline b5382b81182bcc0257091ea9f275e9d2 https://www.encodeproject.org/files/ENCFF557CPW/@@download/ENCFF557CPW.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF577DPU bam alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NBR, ENCFF643CGH 546033690 ENCODE Processing Pipeline 04facd3de8236685c596efc33bbd73cd https://www.encodeproject.org/files/ENCFF577DPU/@@download/ENCFF577DPU.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF859DOP bam unfiltered alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NBL, ENCFF643CGH 1280594677 ENCODE Processing Pipeline 01ddfdfcec992984d2bf1cc043fb74a5 https://www.encodeproject.org/files/ENCFF859DOP/@@download/ENCFF859DOP.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF230UCT bam alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NBL, ENCFF643CGH 732260860 ENCODE Processing Pipeline 830b49318ad6467427b314db51f95f4d https://www.encodeproject.org/files/ENCFF230UCT/@@download/ENCFF230UCT.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF397DUC bam unfiltered alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NBL, ENCFF807MUK 1275564194 ENCODE Processing Pipeline 33bee09e90d571f3b5976c7f583e74d3 https://www.encodeproject.org/files/ENCFF397DUC/@@download/ENCFF397DUC.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF922TWG bam alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NBL, ENCFF807MUK 732453557 ENCODE Processing Pipeline c29b96ee832b6a6c36f9e0796912dcd7 https://www.encodeproject.org/files/ENCFF922TWG/@@download/ENCFF922TWG.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF981RAP bam unfiltered alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NBR, ENCFF807MUK 986350198 ENCODE Processing Pipeline 765229da05b5e7b0f1422c39ef0046f8 https://www.encodeproject.org/files/ENCFF981RAP/@@download/ENCFF981RAP.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF067NBD bam alignments ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NBR, ENCFF807MUK 546286710 ENCODE Processing Pipeline 841dcb653a31e7b29f39746e3cfafc54 https://www.encodeproject.org/files/ENCFF067NBD/@@download/ENCFF067NBD.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF612ZSO bigWig signal p-value ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF230UCT, ENCFF440RZX 359623344 ENCODE Processing Pipeline 435e26da2c201e0a761d2445120eb2e1 https://www.encodeproject.org/files/ENCFF612ZSO/@@download/ENCFF612ZSO.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF490ALZ bigWig signal p-value ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF577DPU 330819146 ENCODE Processing Pipeline 15316d3d6e688626cb3b6d371e5f27ec https://www.encodeproject.org/files/ENCFF490ALZ/@@download/ENCFF490ALZ.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF070ZJO bigWig signal p-value ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF230UCT, ENCFF440RZX, ENCFF577DPU 590934224 ENCODE Processing Pipeline 2773e85ddf46a312cd91459b67b00394 https://www.encodeproject.org/files/ENCFF070ZJO/@@download/ENCFF070ZJO.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF993PVS bigWig fold change over control ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF230UCT, ENCFF440RZX 282394773 ENCODE Processing Pipeline 0f5e6705252d7e852929b61f58ec622f https://www.encodeproject.org/files/ENCFF993PVS/@@download/ENCFF993PVS.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF895TNQ bigWig fold change over control ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF577DPU 217438638 ENCODE Processing Pipeline 23ae15e22aeb98fe3cad275008fc6786 https://www.encodeproject.org/files/ENCFF895TNQ/@@download/ENCFF895TNQ.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF330JXX bed narrowPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF230UCT, ENCFF440RZX 4076330 ENCODE Processing Pipeline 82e35fc41dc9118a6e3213288a188000 https://www.encodeproject.org/files/ENCFF330JXX/@@download/ENCFF330JXX.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF834YUX bigWig fold change over control ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF230UCT, ENCFF440RZX, ENCFF577DPU 552542741 ENCODE Processing Pipeline 014d3eff4d025e5a567705f8a10ef2bc https://www.encodeproject.org/files/ENCFF834YUX/@@download/ENCFF834YUX.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF990MZM bed narrowPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF230UCT, ENCFF440RZX, ENCFF577DPU 5150502 ENCODE Processing Pipeline d45e206ac65ac87598b1b51da74c19a0 https://www.encodeproject.org/files/ENCFF990MZM/@@download/ENCFF990MZM.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF976SNX bed narrowPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF577DPU 3892518 ENCODE Processing Pipeline 8417fed496d98750376bc1d3fdd621f2 https://www.encodeproject.org/files/ENCFF976SNX/@@download/ENCFF976SNX.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF991ARW bigBed narrowPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF330JXX 10342579 ENCODE Processing Pipeline 3889979891524acbfb170943ecd3b145 https://www.encodeproject.org/files/ENCFF991ARW/@@download/ENCFF991ARW.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF809XRT bed narrowPeak conservative idr thresholded peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF330JXX, ENCFF419RSJ, ENCFF976SNX, ENCFF990MZM 31335 ENCODE Processing Pipeline 6e60b316a4f5ec1dc5ac86a804d73990 https://www.encodeproject.org/files/ENCFF809XRT/@@download/ENCFF809XRT.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF184VSI bigBed narrowPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF976SNX 10005953 ENCODE Processing Pipeline c9c013ddaaa81b8f4b3f5575ad7f5e4d https://www.encodeproject.org/files/ENCFF184VSI/@@download/ENCFF184VSI.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF788XHR bigBed narrowPeak peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF990MZM 11265484 ENCODE Processing Pipeline 4efc77e815c394f9c13d7f15c0365d10 https://www.encodeproject.org/files/ENCFF788XHR/@@download/ENCFF788XHR.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF306ZCP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF809XRT 107322 ENCODE Processing Pipeline 9a4dcd9b3d4c406c98c069334ec9f39e https://www.encodeproject.org/files/ENCFF306ZCP/@@download/ENCFF306ZCP.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF514IGC bed narrowPeak optimal idr thresholded peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF330JXX, ENCFF419RSJ, ENCFF976SNX, ENCFF990MZM 36845 ENCODE Processing Pipeline 04e23c492f686af0836c251b08648ef7 https://www.encodeproject.org/files/ENCFF514IGC/@@download/ENCFF514IGC.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF180AZY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF514IGC 116315 ENCODE Processing Pipeline a9ade4aed4a937ae1ec898ab6992b4bb https://www.encodeproject.org/files/ENCFF180AZY/@@download/ENCFF180AZY.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000OUY bam alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OVI 607942828 Richard Myers, HAIB f0fa1faae284a01ad31ecc1bc687016f https://www.encodeproject.org/files/ENCFF000OUY/@@download/ENCFF000OUY.bam hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OUZ bigBed broadPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCU 170332 Richard Myers, HAIB 058172096dd6ae2e56154b513c1cb412 https://www.encodeproject.org/files/ENCFF000OUZ/@@download/ENCFF000OUZ.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OVA bigBed broadPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCV 369913 Richard Myers, HAIB 6a07568e15c75885da47c579bbd0a65e https://www.encodeproject.org/files/ENCFF000OVA/@@download/ENCFF000OVA.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OVD bigWig raw signal ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 3130115 Richard Myers, HAIB d07e3c9eb85a127f0e7f2634819fc159 https://www.encodeproject.org/files/ENCFF000OVD/@@download/ENCFF000OVD.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OVE bam alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OVV 2752260262 Richard Myers, HAIB 1767122b5363feb43f22ac1c3d73764e https://www.encodeproject.org/files/ENCFF000OVE/@@download/ENCFF000OVE.bam hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OVF bigWig raw signal ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 64552481 Richard Myers, HAIB cdb9374d69d754d03c2dc64628a05110 https://www.encodeproject.org/files/ENCFF000OVF/@@download/ENCFF000OVF.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OVI fastq reads ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 506778596 Richard Myers, HAIB f30bc8b7f194e81aa3ba1086149d70f6 https://www.encodeproject.org/files/ENCFF000OVI/@@download/ENCFF000OVI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OVV fastq reads ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 3485830455 Richard Myers, HAIB 0e84aa12be3eb7c6878e165ebb72cf23 https://www.encodeproject.org/files/ENCFF000OVV/@@download/ENCFF000OVV.fastq.gz HiSeq 2000 /files/ENCFF000OSP/ released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UCU bed broadPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 75044 Richard Myers, HAIB 9b07f998c4d8e52767dec935750873d0 https://www.encodeproject.org/files/ENCFF001UCU/@@download/ENCFF001UCU.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UCV bed broadPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 187569 Richard Myers, HAIB 2ec96245e8c7572fe86b76a92875a895 https://www.encodeproject.org/files/ENCFF001UCV/@@download/ENCFF001UCV.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CJP bed narrowPeak optimal idr thresholded peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 250288 ENCODE Consortium Analysis Working Group 097300ddc73b049c220683a8ad25e146 https://www.encodeproject.org/files/ENCFF002CJP/@@download/ENCFF002CJP.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF827CDG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE ENCFF002CJP 653973 ENCODE Consortium 3986c0292394b815faef86dd44362013 https://www.encodeproject.org/files/ENCFF827CDG/@@download/ENCFF827CDG.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF468ENY bam alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVI, ENCFF643CGH 460530578 ENCODE Processing Pipeline aa33520c81c2561895e94a27cf9ed2b1 https://www.encodeproject.org/files/ENCFF468ENY/@@download/ENCFF468ENY.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF625KWC bam unfiltered alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVI, ENCFF643CGH 717914257 ENCODE Processing Pipeline 6e1efdac123d503962f9be233134fe2c https://www.encodeproject.org/files/ENCFF625KWC/@@download/ENCFF625KWC.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF624SNE bam unfiltered alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVV, ENCFF643CGH 4186360458 ENCODE Processing Pipeline 5a25b8d2091893a13a1bc8b7954780a8 https://www.encodeproject.org/files/ENCFF624SNE/@@download/ENCFF624SNE.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF221YIR bam alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVV, ENCFF643CGH 1871508687 ENCODE Processing Pipeline a479febde6ed2d31f346afd93e83ccb1 https://www.encodeproject.org/files/ENCFF221YIR/@@download/ENCFF221YIR.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF089XBD bam unfiltered alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVI, ENCFF807MUK 714910816 ENCODE Processing Pipeline a862f9d6b8340494a733b116e2555e84 https://www.encodeproject.org/files/ENCFF089XBD/@@download/ENCFF089XBD.bam hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF748LJL bam alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVI, ENCFF807MUK 460879304 ENCODE Processing Pipeline cb6e020d602d4f0060579ee1c8253e1f https://www.encodeproject.org/files/ENCFF748LJL/@@download/ENCFF748LJL.bam hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF905QYS bam alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVV, ENCFF807MUK 1872124803 ENCODE Processing Pipeline 6eb098fbaddde8393e6ae6522d9fd6c3 https://www.encodeproject.org/files/ENCFF905QYS/@@download/ENCFF905QYS.bam hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF600EYB bam unfiltered alignments ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVV, ENCFF807MUK 4171160681 ENCODE Processing Pipeline 1b76c5fa7c45d257b7dc40198a9ad456 https://www.encodeproject.org/files/ENCFF600EYB/@@download/ENCFF600EYB.bam hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF861YYY bigWig signal p-value ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF221YIR, ENCFF948LKH 548470358 ENCODE Processing Pipeline 273db64a0883a630f6604f5cdda2d991 https://www.encodeproject.org/files/ENCFF861YYY/@@download/ENCFF861YYY.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF370YJW bigWig signal p-value ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF468ENY, ENCFF948LKH 375982597 ENCODE Processing Pipeline e1b0b0efa185fd4d1466a8d35f432b0c https://www.encodeproject.org/files/ENCFF370YJW/@@download/ENCFF370YJW.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF352HWK bed narrowPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF468ENY, ENCFF948LKH 4335696 ENCODE Processing Pipeline 071a4460014585e0e1447137b433a00f https://www.encodeproject.org/files/ENCFF352HWK/@@download/ENCFF352HWK.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF016DJT bigBed narrowPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF344CGB 11315407 ENCODE Processing Pipeline a5d47ea14365c6b1de9bb51bb8151c30 https://www.encodeproject.org/files/ENCFF016DJT/@@download/ENCFF016DJT.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF777AYI bigWig fold change over control ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF221YIR, ENCFF948LKH 706758045 ENCODE Processing Pipeline 6e21ad4834ef9473a5f688cc1536cd30 https://www.encodeproject.org/files/ENCFF777AYI/@@download/ENCFF777AYI.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF712YJK bed narrowPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF221YIR, ENCFF948LKH 5120598 ENCODE Processing Pipeline 2172038e5b382a1bd86393684376bd66 https://www.encodeproject.org/files/ENCFF712YJK/@@download/ENCFF712YJK.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF824JON bigWig signal p-value ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF221YIR, ENCFF468ENY, ENCFF948LKH 550956649 ENCODE Processing Pipeline 613da3f6f490844e7127bd2c7bbc11cb https://www.encodeproject.org/files/ENCFF824JON/@@download/ENCFF824JON.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF088PUQ bed narrowPeak conservative idr thresholded peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF344CGB, ENCFF352HWK, ENCFF419RSJ, ENCFF712YJK 221075 ENCODE Processing Pipeline 426580ffcc9e3cc4935568c78de2972c https://www.encodeproject.org/files/ENCFF088PUQ/@@download/ENCFF088PUQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF994PPP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF088PUQ 432796 ENCODE Processing Pipeline 9db924b89339475f862dff469c60b24f https://www.encodeproject.org/files/ENCFF994PPP/@@download/ENCFF994PPP.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF195SPX bigWig fold change over control ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF468ENY, ENCFF948LKH 275792328 ENCODE Processing Pipeline 726fae24160cc2dd874ce27957ee4f35 https://www.encodeproject.org/files/ENCFF195SPX/@@download/ENCFF195SPX.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF243PSJ bed narrowPeak optimal idr thresholded peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF344CGB, ENCFF352HWK, ENCFF419RSJ, ENCFF712YJK 268805 ENCODE Processing Pipeline 7ca8e296ed81a8ede4969ea54007a197 https://www.encodeproject.org/files/ENCFF243PSJ/@@download/ENCFF243PSJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF061XZZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF243PSJ 601877 ENCODE Processing Pipeline 6f55d73ae9e0014231883131267b22ce https://www.encodeproject.org/files/ENCFF061XZZ/@@download/ENCFF061XZZ.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF246ONG bigBed narrowPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF352HWK 10607786 ENCODE Processing Pipeline 66f3b4099936a0ad1871e3dc9dc13b3a https://www.encodeproject.org/files/ENCFF246ONG/@@download/ENCFF246ONG.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF699TEW bigBed narrowPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF712YJK 11346905 ENCODE Processing Pipeline 1642f19a628b2b4204e2ab33656f00ad https://www.encodeproject.org/files/ENCFF699TEW/@@download/ENCFF699TEW.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF160JKQ bigWig fold change over control ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF221YIR, ENCFF468ENY, ENCFF948LKH 864960338 ENCODE Processing Pipeline ad4088d2a4cf94a4cebfbf662960ee64 https://www.encodeproject.org/files/ENCFF160JKQ/@@download/ENCFF160JKQ.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF344CGB bed narrowPeak peaks ENCSR000BLU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF221YIR, ENCFF468ENY, ENCFF948LKH 5457852 ENCODE Processing Pipeline 41f3ac95dbfdc1b9c4d6cff0307fd378 https://www.encodeproject.org/files/ENCFF344CGB/@@download/ENCFF344CGB.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NTF bam alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NTS 732148044 Richard Myers, HAIB 6e3a790e78b9858d207af4d0f2481a49 https://www.encodeproject.org/files/ENCFF000NTF/@@download/ENCFF000NTF.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NTG bam alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NTV 1225452186 Richard Myers, HAIB 79106e1fe92f00b8ec9582057afc6137 https://www.encodeproject.org/files/ENCFF000NTG/@@download/ENCFF000NTG.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NTI bigBed broadPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TWL 853434 Richard Myers, HAIB 8442d10612e5c86f6efd5ff69b965acd https://www.encodeproject.org/files/ENCFF000NTI/@@download/ENCFF000NTI.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NTJ bigBed broadPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TWM 422576 Richard Myers, HAIB c75694ea091e7a308eaf6e6d2497dab9 https://www.encodeproject.org/files/ENCFF000NTJ/@@download/ENCFF000NTJ.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NTK bigWig raw signal ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 18078508 Richard Myers, HAIB cb8b59f1f38ac1125a8058dd278e474a https://www.encodeproject.org/files/ENCFF000NTK/@@download/ENCFF000NTK.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NTM bigWig raw signal ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 20505001 Richard Myers, HAIB 1f41f8d0ea69510b55f3f6b4d679b3bc https://www.encodeproject.org/files/ENCFF000NTM/@@download/ENCFF000NTM.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NTS fastq reads ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 772866571 Richard Myers, HAIB 4719bfee507fdaf2aff47483116a5e2b https://www.encodeproject.org/files/ENCFF000NTS/@@download/ENCFF000NTS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, low read depth biological replicates with identical biosample ENCFF000NTV fastq reads ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1177773055 Richard Myers, HAIB 500816db69d3c7328da04d081ff62f0f https://www.encodeproject.org/files/ENCFF000NTV/@@download/ENCFF000NTV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released low read length, low read depth biological replicates with identical biosample ENCFF001TWL bed broadPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 462380 Richard Myers, HAIB cd090da1dfcbdaf52d7ea6923fda8227 https://www.encodeproject.org/files/ENCFF001TWL/@@download/ENCFF001TWL.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TWM bed broadPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 246997 Richard Myers, HAIB c1faa9b72ce2481246ca13d44818e42f https://www.encodeproject.org/files/ENCFF001TWM/@@download/ENCFF001TWM.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CGT bed narrowPeak optimal idr thresholded peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 119918 ENCODE Consortium Analysis Working Group cd8131abfae3d224d17aeabf9e7dd1f9 https://www.encodeproject.org/files/ENCFF002CGT/@@download/ENCFF002CGT.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF476LFV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE ENCFF002CGT 275922 ENCODE Consortium 74428b817bac7ee136ce666ccff19253 https://www.encodeproject.org/files/ENCFF476LFV/@@download/ENCFF476LFV.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF662GDH bam unfiltered alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTS, ENCFF807MUK 1091109495 ENCODE Processing Pipeline 88ec92f33ed18d2d22272957edbce8e0 https://www.encodeproject.org/files/ENCFF662GDH/@@download/ENCFF662GDH.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF276KQJ bam alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTS, ENCFF807MUK 710120009 ENCODE Processing Pipeline 10c3ccb031661a8ab100e1cf4c895bad https://www.encodeproject.org/files/ENCFF276KQJ/@@download/ENCFF276KQJ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF800ZBG bam unfiltered alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTV, ENCFF807MUK 1550128692 ENCODE Processing Pipeline d0a9fb43c8f7f545feade72b5ed2a084 https://www.encodeproject.org/files/ENCFF800ZBG/@@download/ENCFF800ZBG.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF797QYH bam alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTV, ENCFF807MUK 1022192467 ENCODE Processing Pipeline 52e7eef633f862b9d2d4b190b1a81c9b https://www.encodeproject.org/files/ENCFF797QYH/@@download/ENCFF797QYH.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF881AUO bam unfiltered alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTS, ENCFF643CGH 1093888173 ENCODE Processing Pipeline 9261054a67ab29dea38ca7bee77191a6 https://www.encodeproject.org/files/ENCFF881AUO/@@download/ENCFF881AUO.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF250QDG bam unfiltered alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTV, ENCFF643CGH 1551443400 ENCODE Processing Pipeline 26aaa62ae5c2712a914633da4ce8c892 https://www.encodeproject.org/files/ENCFF250QDG/@@download/ENCFF250QDG.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF163XSL bam alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTV, ENCFF643CGH 1028045683 ENCODE Processing Pipeline ca95d4f9dcce0229400b69e1267ba40a https://www.encodeproject.org/files/ENCFF163XSL/@@download/ENCFF163XSL.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF809UVF bam alignments ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTS, ENCFF643CGH 712812891 ENCODE Processing Pipeline d5040a8a3f66f50ef633e709509d02ad https://www.encodeproject.org/files/ENCFF809UVF/@@download/ENCFF809UVF.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF633VAX bigWig signal p-value ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF438FFV, ENCFF809UVF 480272614 ENCODE Processing Pipeline 2658f0f730e4a5bbe1283f80e5897d5d https://www.encodeproject.org/files/ENCFF633VAX/@@download/ENCFF633VAX.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF729GAG bigWig signal p-value ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF163XSL, ENCFF438FFV, ENCFF488YYE, ENCFF809UVF 935492323 ENCODE Processing Pipeline 0ce5f35dffc3be831c0aaa692398703e https://www.encodeproject.org/files/ENCFF729GAG/@@download/ENCFF729GAG.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF508YPS bigWig fold change over control ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF438FFV, ENCFF809UVF 411733752 ENCODE Processing Pipeline 05a1418c757e361a429fc8d6bf501e0e https://www.encodeproject.org/files/ENCFF508YPS/@@download/ENCFF508YPS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF572KPX bigBed narrowPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF962SVE 12675209 ENCODE Processing Pipeline 38b0368b943a8edc0ebf4315fa0ea9e2 https://www.encodeproject.org/files/ENCFF572KPX/@@download/ENCFF572KPX.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF176LKF bigWig fold change over control ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF163XSL, ENCFF438FFV, ENCFF488YYE 625341695 ENCODE Processing Pipeline 0867ac4796e990d14f1810d6aef5be06 https://www.encodeproject.org/files/ENCFF176LKF/@@download/ENCFF176LKF.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF870HVW bigWig fold change over control ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF163XSL, ENCFF438FFV, ENCFF488YYE, ENCFF809UVF 890355764 ENCODE Processing Pipeline 67122bcc946b69cc441e99f9dbdaa8cd https://www.encodeproject.org/files/ENCFF870HVW/@@download/ENCFF870HVW.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF962SVE bed narrowPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF438FFV, ENCFF809UVF 5847160 ENCODE Processing Pipeline 892871ae3bc2d33caf1780c0d01e7edc https://www.encodeproject.org/files/ENCFF962SVE/@@download/ENCFF962SVE.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF046VSY bigWig signal p-value ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF163XSL, ENCFF438FFV, ENCFF488YYE 666594746 ENCODE Processing Pipeline 3b5c894e218d55dd5c543c71a7441d3a https://www.encodeproject.org/files/ENCFF046VSY/@@download/ENCFF046VSY.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF376ZGQ bed narrowPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF163XSL, ENCFF438FFV, ENCFF488YYE, ENCFF809UVF 7080927 ENCODE Processing Pipeline 883715647ae49afac7603e47721b356b https://www.encodeproject.org/files/ENCFF376ZGQ/@@download/ENCFF376ZGQ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF180SGO bed narrowPeak conservative idr thresholded peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF313OEI, ENCFF376ZGQ, ENCFF419RSJ, ENCFF962SVE 377712 ENCODE Processing Pipeline aa32cdb64c97f0d9a4ab8e0758844149 https://www.encodeproject.org/files/ENCFF180SGO/@@download/ENCFF180SGO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF275LYR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF180SGO 755123 ENCODE Processing Pipeline 8eddc92cd2e9c224c0f72d808547a281 https://www.encodeproject.org/files/ENCFF275LYR/@@download/ENCFF275LYR.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF587BJK bed narrowPeak optimal idr thresholded peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF313OEI, ENCFF376ZGQ, ENCFF419RSJ, ENCFF962SVE 419234 ENCODE Processing Pipeline 9dd4cdec593b5174cbc4f3ed4e3f91ca https://www.encodeproject.org/files/ENCFF587BJK/@@download/ENCFF587BJK.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF313OEI bed narrowPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF163XSL, ENCFF438FFV, ENCFF488YYE 6424156 ENCODE Processing Pipeline c57a02e07873eadca766a115f0fd0f73 https://www.encodeproject.org/files/ENCFF313OEI/@@download/ENCFF313OEI.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF468YBP bigBed narrowPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF313OEI 12942220 ENCODE Processing Pipeline a1b4c9e7a9fb6ef18370af1427bd55bc https://www.encodeproject.org/files/ENCFF468YBP/@@download/ENCFF468YBP.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF869QTA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587BJK 819878 ENCODE Processing Pipeline 5058d69aa396cd57575f8e71df8707f3 https://www.encodeproject.org/files/ENCFF869QTA/@@download/ENCFF869QTA.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF801MTQ bigBed narrowPeak peaks ENCSR000BJZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF376ZGQ 13000538 ENCODE Processing Pipeline 45861746ec7bb3c61065108564ae524a https://www.encodeproject.org/files/ENCFF801MTQ/@@download/ENCFF801MTQ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF000NYZ bam alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NZO 1665053881 Richard Myers, HAIB 7aeca89582e6782a0d92691fceae94f6 https://www.encodeproject.org/files/ENCFF000NYZ/@@download/ENCFF000NYZ.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NZB bigBed broadPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TXY 1503585 Richard Myers, HAIB 0d6c669bf4fabb8ed820841ddd191264 https://www.encodeproject.org/files/ENCFF000NZB/@@download/ENCFF000NZB.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NZC bigBed broadPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TXZ 712919 Richard Myers, HAIB 5d8b51a86f298062ba1cba56737d2000 https://www.encodeproject.org/files/ENCFF000NZC/@@download/ENCFF000NZC.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NZD bigWig raw signal ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 63856218 Richard Myers, HAIB 3a680b02003d205f9c535b67b4a808cd https://www.encodeproject.org/files/ENCFF000NZD/@@download/ENCFF000NZD.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000NZE bigWig raw signal ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 17961651 Richard Myers, HAIB e7aa660d78ead6d251f6608c3fbd9d7e https://www.encodeproject.org/files/ENCFF000NZE/@@download/ENCFF000NZE.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000NZF bam alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NZQ 673582149 Richard Myers, HAIB e2ef2288343a6c53b9a038a9d0dc92d8 https://www.encodeproject.org/files/ENCFF000NZF/@@download/ENCFF000NZF.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NZO fastq reads ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 732344143 Richard Myers, HAIB 07f90a31b8103bbdbc9ca742bde1990c https://www.encodeproject.org/files/ENCFF000NZO/@@download/ENCFF000NZO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCS/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NZQ fastq reads ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1349640631 Richard Myers, HAIB 3531a727a2f8da3414267a10652034be https://www.encodeproject.org/files/ENCFF000NZQ/@@download/ENCFF000NZQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001TXY bed broadPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 1 827444 Richard Myers, HAIB fb1b898c5a765ee3ff980f7fbca7b1c6 https://www.encodeproject.org/files/ENCFF001TXY/@@download/ENCFF001TXY.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001TXZ bed broadPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 1 445543 Richard Myers, HAIB 9ec3819efc30c9208a512b642c86a69d https://www.encodeproject.org/files/ENCFF001TXZ/@@download/ENCFF001TXZ.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CHJ bed narrowPeak optimal idr thresholded peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 489675 ENCODE Consortium Analysis Working Group 92fda2a5af18eacb65aacdddbd0021ed https://www.encodeproject.org/files/ENCFF002CHJ/@@download/ENCFF002CHJ.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF627XPJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE ENCFF002CHJ 1073668 ENCODE Consortium 14c314ca61d327251a3f9099fd558f72 https://www.encodeproject.org/files/ENCFF627XPJ/@@download/ENCFF627XPJ.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF052ZVD bam unfiltered alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZO, ENCFF643CGH 953697596 ENCODE Processing Pipeline f66725278ee7c33eedf7ccec76053907 https://www.encodeproject.org/files/ENCFF052ZVD/@@download/ENCFF052ZVD.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF018FQW bam alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZO, ENCFF643CGH 535815250 ENCODE Processing Pipeline d5d62a4389314d1d84256f89d76bf4b2 https://www.encodeproject.org/files/ENCFF018FQW/@@download/ENCFF018FQW.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF491WYR bam unfiltered alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZQ, ENCFF643CGH 1446250586 ENCODE Processing Pipeline a4b1861d0092e03e39b81cc2f427f341 https://www.encodeproject.org/files/ENCFF491WYR/@@download/ENCFF491WYR.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF275TPO bam alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZQ, ENCFF643CGH 511252471 ENCODE Processing Pipeline 91e886048b87d2550a9b0411e59da14f https://www.encodeproject.org/files/ENCFF275TPO/@@download/ENCFF275TPO.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF917NZU bam alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZO, ENCFF807MUK 535314901 ENCODE Processing Pipeline 2b1b473378d01e79b18b4728235ab282 https://www.encodeproject.org/files/ENCFF917NZU/@@download/ENCFF917NZU.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF364VOW bam unfiltered alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZO, ENCFF807MUK 950934665 ENCODE Processing Pipeline ee7fb6ef3dda6a42bec1f2806c37689c https://www.encodeproject.org/files/ENCFF364VOW/@@download/ENCFF364VOW.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF958KJV bam unfiltered alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZQ, ENCFF807MUK 1444697401 ENCODE Processing Pipeline 4d45cf243c3d722f7e2295e006525794 https://www.encodeproject.org/files/ENCFF958KJV/@@download/ENCFF958KJV.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF512AMK bam alignments ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZQ, ENCFF807MUK 506623907 ENCODE Processing Pipeline 5cb23442e8156f5df610311a5bb9bfbb https://www.encodeproject.org/files/ENCFF512AMK/@@download/ENCFF512AMK.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF659YOA bigWig signal p-value ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF018FQW, ENCFF100EIH, ENCFF438FFV 484513590 ENCODE Processing Pipeline 1c159657bf0fcf808afdb5e655efa84a https://www.encodeproject.org/files/ENCFF659YOA/@@download/ENCFF659YOA.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF067IFI bigWig signal p-value ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF275TPO, ENCFF438FFV 510269386 ENCODE Processing Pipeline bd271db7daeb3fc2e8b5107bb0b3ef9e https://www.encodeproject.org/files/ENCFF067IFI/@@download/ENCFF067IFI.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF227DAH bigWig signal p-value ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF018FQW, ENCFF100EIH, ENCFF275TPO, ENCFF438FFV 596426247 ENCODE Processing Pipeline 4326a1c69d62c6b8f3ca39c3af6a24a1 https://www.encodeproject.org/files/ENCFF227DAH/@@download/ENCFF227DAH.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF964BYM bigWig fold change over control ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF018FQW, ENCFF100EIH, ENCFF438FFV 289165238 ENCODE Processing Pipeline 7d18b7761398ce7ff1c3b0ca7623112e https://www.encodeproject.org/files/ENCFF964BYM/@@download/ENCFF964BYM.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF628YUS bigWig fold change over control ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF275TPO, ENCFF438FFV 273897875 ENCODE Processing Pipeline 80ecb40e8461ecb6f3b61001b4586f61 https://www.encodeproject.org/files/ENCFF628YUS/@@download/ENCFF628YUS.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF702MTT bigWig fold change over control ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF018FQW, ENCFF100EIH, ENCFF275TPO, ENCFF438FFV 488617594 ENCODE Processing Pipeline 40bdafb0b464a531d618a57db3c39048 https://www.encodeproject.org/files/ENCFF702MTT/@@download/ENCFF702MTT.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF595ZLD bed narrowPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF018FQW, ENCFF100EIH, ENCFF438FFV 4710440 ENCODE Processing Pipeline 9b78dc4690e82bbbf1488a225ebac441 https://www.encodeproject.org/files/ENCFF595ZLD/@@download/ENCFF595ZLD.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF877BPJ bed narrowPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF018FQW, ENCFF100EIH, ENCFF275TPO, ENCFF438FFV 5407590 ENCODE Processing Pipeline 3783fdfde5af7fd39aba72c64f944dc9 https://www.encodeproject.org/files/ENCFF877BPJ/@@download/ENCFF877BPJ.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF314GUU bigBed narrowPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF595ZLD 10601343 ENCODE Processing Pipeline 14da83f21ff8af004f76c646c15038e0 https://www.encodeproject.org/files/ENCFF314GUU/@@download/ENCFF314GUU.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF518BTM bed narrowPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF275TPO, ENCFF438FFV 4537940 ENCODE Processing Pipeline 07e99b0bea72c11d5224fe4cfbd27e4b https://www.encodeproject.org/files/ENCFF518BTM/@@download/ENCFF518BTM.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF129XTQ bigBed narrowPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF877BPJ 10998333 ENCODE Processing Pipeline 35f9ff1bb7dc4132d8a4fd8f7eb106c9 https://www.encodeproject.org/files/ENCFF129XTQ/@@download/ENCFF129XTQ.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF343DNF bigBed narrowPeak peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF518BTM 10289065 ENCODE Processing Pipeline dece2a71aba10b7cc507ab014b58eac6 https://www.encodeproject.org/files/ENCFF343DNF/@@download/ENCFF343DNF.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF952CNN bed narrowPeak conservative idr thresholded peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF518BTM, ENCFF595ZLD, ENCFF877BPJ 367015 ENCODE Processing Pipeline a493185738fd02f435be01ef5597b440 https://www.encodeproject.org/files/ENCFF952CNN/@@download/ENCFF952CNN.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF422ZQG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF952CNN 674339 ENCODE Processing Pipeline 66596b6c69de2bedd9cb46783147078a https://www.encodeproject.org/files/ENCFF422ZQG/@@download/ENCFF422ZQG.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF196JGP bed narrowPeak optimal idr thresholded peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF518BTM, ENCFF595ZLD, ENCFF877BPJ 380037 ENCODE Processing Pipeline 208110c4fa01e0e67c5715c25d3145b4 https://www.encodeproject.org/files/ENCFF196JGP/@@download/ENCFF196JGP.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF847INA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHD ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF196JGP 690810 ENCODE Processing Pipeline d7acc2495bc80ddfc21ec77ee50226bd https://www.encodeproject.org/files/ENCFF847INA/@@download/ENCFF847INA.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF355QDR fastq reads ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF532FBK 2483079574 Richard Myers, HAIB bea7867dcc070ff0f7b17f70b20befec SRA:SRR6213014 https://www.encodeproject.org/files/ENCFF355QDR/@@download/ENCFF355QDR.fastq.gz HiSeq 2000 /files/ENCFF953GZP/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF532FBK fastq reads ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF355QDR 2598823525 Richard Myers, HAIB 42fcee5b47b8726d875067677a74ddee SRA:SRR6213014 https://www.encodeproject.org/files/ENCFF532FBK/@@download/ENCFF532FBK.fastq.gz HiSeq 2000 /files/ENCFF067POA/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF020FAT bam alignments ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF355QDR, ENCFF532FBK, ENCFF807MUK 3821928126 ENCODE Processing Pipeline 4d960d851644471ea36efb7e091b8bac https://www.encodeproject.org/files/ENCFF020FAT/@@download/ENCFF020FAT.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF254JUN bam unfiltered alignments ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF355QDR, ENCFF532FBK, ENCFF643CGH 5837430083 ENCODE Processing Pipeline 77a18c89bcd247a2019d78de26b5e97a https://www.encodeproject.org/files/ENCFF254JUN/@@download/ENCFF254JUN.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF027LKP bam unfiltered alignments ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF355QDR, ENCFF532FBK, ENCFF807MUK 5829033355 ENCODE Processing Pipeline ceeae2c8b41a7442d62998ad2aa1740b https://www.encodeproject.org/files/ENCFF027LKP/@@download/ENCFF027LKP.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF265RTL bam alignments ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF355QDR, ENCFF532FBK, ENCFF643CGH 3823620422 ENCODE Processing Pipeline 1a7b31f412358c53e0c1ec21c231da9f https://www.encodeproject.org/files/ENCFF265RTL/@@download/ENCFF265RTL.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF983ENG bigWig signal p-value ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF265RTL 1565070069 ENCODE Processing Pipeline a5ce65146845c1ba2ec4932a3e08460e https://www.encodeproject.org/files/ENCFF983ENG/@@download/ENCFF983ENG.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF007GYM bigWig fold change over control ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF265RTL 1345038816 ENCODE Processing Pipeline 8912307cd9cbecabffee6bdb9ffb9888 https://www.encodeproject.org/files/ENCFF007GYM/@@download/ENCFF007GYM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF240CHW bed narrowPeak peaks ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF265RTL 7048920 ENCODE Processing Pipeline a73ac76000421fc4823fe02c0c367f7c https://www.encodeproject.org/files/ENCFF240CHW/@@download/ENCFF240CHW.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF846RCM bigBed narrowPeak peaks ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF240CHW 10777611 ENCODE Processing Pipeline 12c3fd776aa542cb5f87a164e86c4cd8 https://www.encodeproject.org/files/ENCFF846RCM/@@download/ENCFF846RCM.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF616UBW bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF783HDF 72473 ENCODE Processing Pipeline 83da5b47ed70631c0fd71d75a267ee70 https://www.encodeproject.org/files/ENCFF616UBW/@@download/ENCFF616UBW.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF783HDF bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF240CHW, ENCFF419RSJ 16989 ENCODE Processing Pipeline ee56cc46eb6cdd5aa92f9cc67ce75747 https://www.encodeproject.org/files/ENCFF783HDF/@@download/ENCFF783HDF.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF199RTR bigWig signal p-value ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF020FAT 1658643320 ENCODE Processing Pipeline 5c65233c2b2e695624da5c9997ce96de https://www.encodeproject.org/files/ENCFF199RTR/@@download/ENCFF199RTR.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF009OHL bigWig fold change over control ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF020FAT 1342719483 ENCODE Processing Pipeline 3963f797a9710413fa066e441c490bf6 https://www.encodeproject.org/files/ENCFF009OHL/@@download/ENCFF009OHL.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF358ADA bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF362CPR 18062 ENCODE Processing Pipeline 093fb1152c273dc656fd7b4656d0cd5e https://www.encodeproject.org/files/ENCFF358ADA/@@download/ENCFF358ADA.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF393BSZ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF358ADA 72509 ENCODE Processing Pipeline b623a0861af668721c6a5288f9f9ebae https://www.encodeproject.org/files/ENCFF393BSZ/@@download/ENCFF393BSZ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF242NQJ bigBed narrowPeak peaks ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF362CPR 10757602 ENCODE Processing Pipeline 175c2069b68f300bdcb6dc11d2ab7747 https://www.encodeproject.org/files/ENCFF242NQJ/@@download/ENCFF242NQJ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF362CPR bed narrowPeak peaks ENCSR270TYZ ChIP-seq UBERON:0036149 suprapubic skin tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF020FAT 7041585 ENCODE Processing Pipeline 07fc3b79cc95f0ed5dbfb696fde20b65 https://www.encodeproject.org/files/ENCFF362CPR/@@download/ENCFF362CPR.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF000PJV bigBed broadPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UGI 615083 Richard Myers, HAIB b8bfbcd1240a0df22f5cf5e641e78dc0 https://www.encodeproject.org/files/ENCFF000PJV/@@download/ENCFF000PJV.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PJW bigBed broadPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UGJ 209964 Richard Myers, HAIB 805cd6292b0bdb0d78b0932eca338920 https://www.encodeproject.org/files/ENCFF000PJW/@@download/ENCFF000PJW.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PJY bam alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PKJ 1029638068 Richard Myers, HAIB 66f924650054e4c2e0e12dc6bc234975 https://www.encodeproject.org/files/ENCFF000PJY/@@download/ENCFF000PJY.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PJZ bam alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PKH 1226801692 Richard Myers, HAIB 347da546121a1fb8f66b01704e6e7cbd https://www.encodeproject.org/files/ENCFF000PJZ/@@download/ENCFF000PJZ.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PKA bigWig raw signal ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 1 26425229 Richard Myers, HAIB 1d370c95ef8237ff731eb63a42b8cfea https://www.encodeproject.org/files/ENCFF000PKA/@@download/ENCFF000PKA.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PKB bigWig raw signal ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 1 13225521 Richard Myers, HAIB b653fc6346b7bb7b34a9b1e89b85c14f https://www.encodeproject.org/files/ENCFF000PKB/@@download/ENCFF000PKB.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PKH fastq reads ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1063709029 Richard Myers, HAIB 6d7019646524af2cf8e09dbaa1bfd4f2 https://www.encodeproject.org/files/ENCFF000PKH/@@download/ENCFF000PKH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PKJ fastq reads ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 929680960 Richard Myers, HAIB 36f3e7ed03201363163a4dfe6c5cb266 https://www.encodeproject.org/files/ENCFF000PKJ/@@download/ENCFF000PKJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UGI bed broadPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 1 362571 Richard Myers, HAIB f82d71ed0f403eb67c4cd195d4914b5c https://www.encodeproject.org/files/ENCFF001UGI/@@download/ENCFF001UGI.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UGJ bed broadPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 1 109420 Richard Myers, HAIB d61620e8d441ab2b5e237930c9af24f5 https://www.encodeproject.org/files/ENCFF001UGJ/@@download/ENCFF001UGJ.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CKO bed narrowPeak optimal idr thresholded peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 453401 ENCODE Consortium Analysis Working Group 0161422718c3df687e5093500f560cca https://www.encodeproject.org/files/ENCFF002CKO/@@download/ENCFF002CKO.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF167BHG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE ENCFF002CKO 951762 ENCODE Consortium a9df41b77783fa9dc202e9d9419bfe8a https://www.encodeproject.org/files/ENCFF167BHG/@@download/ENCFF167BHG.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF830YVW bam unfiltered alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PKJ, ENCFF643CGH 1225477049 ENCODE Processing Pipeline c1da923c1d153b3b60b5c1d9837e964b https://www.encodeproject.org/files/ENCFF830YVW/@@download/ENCFF830YVW.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF444CNM bam alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PKJ, ENCFF643CGH 656567955 ENCODE Processing Pipeline e00bc8a55047ddc2f5b0487bf63b9c3e https://www.encodeproject.org/files/ENCFF444CNM/@@download/ENCFF444CNM.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF003EYJ bam unfiltered alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PKH, ENCFF643CGH 1441507174 ENCODE Processing Pipeline 134fe308356414eda6c86bd143d720d1 https://www.encodeproject.org/files/ENCFF003EYJ/@@download/ENCFF003EYJ.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF960YUK bam alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PKH, ENCFF643CGH 956507218 ENCODE Processing Pipeline aa7999402d824e6de82c0161d9442299 https://www.encodeproject.org/files/ENCFF960YUK/@@download/ENCFF960YUK.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF227RSP bam unfiltered alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PKH, ENCFF807MUK 1437416376 ENCODE Processing Pipeline ee19040f87b484674317c233598de55a https://www.encodeproject.org/files/ENCFF227RSP/@@download/ENCFF227RSP.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF548BKE bam alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PKJ, ENCFF807MUK 656860782 ENCODE Processing Pipeline 9bce647b573f52055112bf4638dd530e https://www.encodeproject.org/files/ENCFF548BKE/@@download/ENCFF548BKE.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF433SCF bam unfiltered alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PKJ, ENCFF807MUK 1220220848 ENCODE Processing Pipeline 6be8f8f5aba05e56bca6ce11d0749762 https://www.encodeproject.org/files/ENCFF433SCF/@@download/ENCFF433SCF.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF674MDC bam alignments ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PKH, ENCFF807MUK 956914143 ENCODE Processing Pipeline e26f3b49412f2d81544acb1eeeae4299 https://www.encodeproject.org/files/ENCFF674MDC/@@download/ENCFF674MDC.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF931LQS bigWig signal p-value ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF960YUK 593742794 ENCODE Processing Pipeline f40b62ec89fe95514e7f6614ae8231ca https://www.encodeproject.org/files/ENCFF931LQS/@@download/ENCFF931LQS.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF668NTT bigWig signal p-value ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF444CNM 407929708 ENCODE Processing Pipeline 24cf8a4f4c22f447d30e82a8a31f82ad https://www.encodeproject.org/files/ENCFF668NTT/@@download/ENCFF668NTT.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF157CUR bigWig signal p-value ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF444CNM, ENCFF960YUK 571685199 ENCODE Processing Pipeline 8a92cc2ebe5e95ad1d658eaa2fce62f1 https://www.encodeproject.org/files/ENCFF157CUR/@@download/ENCFF157CUR.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF295UCA bigWig fold change over control ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF960YUK 464786505 ENCODE Processing Pipeline 952be45bed88522998ecb0dbf4eba861 https://www.encodeproject.org/files/ENCFF295UCA/@@download/ENCFF295UCA.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF603TXA bigWig fold change over control ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF444CNM 395292550 ENCODE Processing Pipeline c4c2fadafccd68989efd4b6672f09ec6 https://www.encodeproject.org/files/ENCFF603TXA/@@download/ENCFF603TXA.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF870IIO bigWig fold change over control ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF444CNM, ENCFF960YUK 703819082 ENCODE Processing Pipeline c81ff3e8a594a96c644a499f57655b0e https://www.encodeproject.org/files/ENCFF870IIO/@@download/ENCFF870IIO.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF022SNV bed narrowPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF444CNM 4437016 ENCODE Processing Pipeline 0f897f0cb4987c1b0e06ff4bdf84b086 https://www.encodeproject.org/files/ENCFF022SNV/@@download/ENCFF022SNV.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF913VUR bed narrowPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF444CNM, ENCFF960YUK 5699876 ENCODE Processing Pipeline de901b0e1c37d35d14152dd68778919d https://www.encodeproject.org/files/ENCFF913VUR/@@download/ENCFF913VUR.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF497JGR bigBed narrowPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF269KTQ 10994373 ENCODE Processing Pipeline 0e20800172ba827d7dfaabebe08b4e14 https://www.encodeproject.org/files/ENCFF497JGR/@@download/ENCFF497JGR.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF269KTQ bed narrowPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF960YUK 5129578 ENCODE Processing Pipeline 13ba946dcba0093998d955caeaf78f5d https://www.encodeproject.org/files/ENCFF269KTQ/@@download/ENCFF269KTQ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF481DHV bigBed narrowPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF913VUR 11420820 ENCODE Processing Pipeline 845933f3bbec9b420f6b6ac7b261a578 https://www.encodeproject.org/files/ENCFF481DHV/@@download/ENCFF481DHV.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF086CTA bed narrowPeak optimal idr thresholded peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF022SNV, ENCFF269KTQ, ENCFF419RSJ, ENCFF913VUR 414118 ENCODE Processing Pipeline 5f48a9a4de9ebe6d618d9749a3d0bb3f https://www.encodeproject.org/files/ENCFF086CTA/@@download/ENCFF086CTA.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF122JIP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF086CTA 723184 ENCODE Processing Pipeline f1133228c77f29b6076ce8654a999f8a https://www.encodeproject.org/files/ENCFF122JIP/@@download/ENCFF122JIP.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF042UND bigBed narrowPeak peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF022SNV 10701925 ENCODE Processing Pipeline d3807a6b5c31e315808a8464e79df6e5 https://www.encodeproject.org/files/ENCFF042UND/@@download/ENCFF042UND.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF765IVS bed narrowPeak conservative idr thresholded peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF022SNV, ENCFF269KTQ, ENCFF419RSJ, ENCFF913VUR 320984 ENCODE Processing Pipeline b44ff409cb2d3ab6a6119e7bb338d038 https://www.encodeproject.org/files/ENCFF765IVS/@@download/ENCFF765IVS.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF776MGC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF4G-human ENCAB000AHQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF765IVS 597851 ENCODE Processing Pipeline 58ffcedfcc12763b392c4d41b1410e02 https://www.encodeproject.org/files/ENCFF776MGC/@@download/ENCFF776MGC.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000MXP bam alignments ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000MXT 794266496 Richard Myers, HAIB 99b96be61781dca01d6d00eb863c7648 https://www.encodeproject.org/files/ENCFF000MXP/@@download/ENCFF000MXP.bam hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF000MXQ bigWig raw signal ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 1 8190462 Richard Myers, HAIB eadde13a4251d801c402b140d18b6b2b https://www.encodeproject.org/files/ENCFF000MXQ/@@download/ENCFF000MXQ.bigWig hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from ENCFF000MXT fastq reads ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 766827737 Richard Myers, HAIB c1edd2d64ef1a7892017bca167f96c43 https://www.encodeproject.org/files/ENCFF000MXT/@@download/ENCFF000MXT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000MXO/ released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF121EED bam alignments ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MXT, ENCFF643CGH 526039184 ENCODE Processing Pipeline 5341231f099c788ae16b32bc05b0f211 https://www.encodeproject.org/files/ENCFF121EED/@@download/ENCFF121EED.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF833MCD bam unfiltered alignments ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MXT, ENCFF807MUK 953864264 ENCODE Processing Pipeline b768353d908886b7616c83c55cb78da1 https://www.encodeproject.org/files/ENCFF833MCD/@@download/ENCFF833MCD.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF352UMD bam alignments ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MXT, ENCFF807MUK 526253787 ENCODE Processing Pipeline 99acbfd982e5d85fb7b005bd61cb01f7 https://www.encodeproject.org/files/ENCFF352UMD/@@download/ENCFF352UMD.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF254ENX bam unfiltered alignments ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MXT, ENCFF643CGH 958239392 ENCODE Processing Pipeline ab194bdca602343cf506fc998b065f80 https://www.encodeproject.org/files/ENCFF254ENX/@@download/ENCFF254ENX.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF134CPX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF001TDO, ENCFF409CPX 34663 ENCODE Processing Pipeline d18dfc734465a278540baa09b932d09d https://www.encodeproject.org/files/ENCFF134CPX/@@download/ENCFF134CPX.bed.gz hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF650PBM bed narrowPeak peaks ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF056OHH, ENCFF121EED 444557 ENCODE Processing Pipeline 4a018068f731cab103e9ad9afae3804d https://www.encodeproject.org/files/ENCFF650PBM/@@download/ENCFF650PBM.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF795RYJ bigBed narrowPeak peaks ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF409CPX 962312 ENCODE Processing Pipeline 6744ab649f9201981db93429e0c1175c https://www.encodeproject.org/files/ENCFF795RYJ/@@download/ENCFF795RYJ.bigBed hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF620CWP bigBed narrowPeak peaks ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF650PBM 956822 ENCODE Processing Pipeline 443afb8d682cc1d6f656ed67ceb53da0 https://www.encodeproject.org/files/ENCFF620CWP/@@download/ENCFF620CWP.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF309UFT bigWig fold change over control ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF352UMD, ENCFF891DUU 227387080 ENCODE Processing Pipeline 0eda7536f6764c9a2d19c95737342f03 https://www.encodeproject.org/files/ENCFF309UFT/@@download/ENCFF309UFT.bigWig hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF409CPX bed narrowPeak peaks ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF352UMD, ENCFF891DUU 450467 ENCODE Processing Pipeline 2f2367d2512c5c5c551356ee9c8753f6 https://www.encodeproject.org/files/ENCFF409CPX/@@download/ENCFF409CPX.bed.gz hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF378GSO bigWig signal p-value ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF056OHH, ENCFF121EED 253972659 ENCODE Processing Pipeline e6abdb85c1b3004bb3358ed12c0f9155 https://www.encodeproject.org/files/ENCFF378GSO/@@download/ENCFF378GSO.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF637ZNN bigWig signal p-value ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF352UMD, ENCFF891DUU 254360347 ENCODE Processing Pipeline 8ffae7c2099c3122a37b5cb185a03dfc https://www.encodeproject.org/files/ENCFF637ZNN/@@download/ENCFF637ZNN.bigWig hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF156DQT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF134CPX 95812 ENCODE Processing Pipeline 0db8f9a12d3312579028d101686e0c44 https://www.encodeproject.org/files/ENCFF156DQT/@@download/ENCFF156DQT.bigBed hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF655WPA bigWig fold change over control ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF056OHH, ENCFF121EED 226670856 ENCODE Processing Pipeline ba4afdcd959f2b6b3a018d320918a0a1 https://www.encodeproject.org/files/ENCFF655WPA/@@download/ENCFF655WPA.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF713HTI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF186ZET 119410 ENCODE Processing Pipeline 9ecbc5596d4dd78cfe13c460fe86bc0a https://www.encodeproject.org/files/ENCFF713HTI/@@download/ENCFF713HTI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF186ZET bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRC ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 2 ENCFF419RSJ, ENCFF650PBM 37915 ENCODE Processing Pipeline af5b4874f07bf098e78cbd3744b72e11 https://www.encodeproject.org/files/ENCFF186ZET/@@download/ENCFF186ZET.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth ENCFF554MGZ fastq reads ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF228VLO 1904507739 Richard Myers, HAIB 3ed3020cd38354af776e0cf4b97228fc SRA:SRR6214368 https://www.encodeproject.org/files/ENCFF554MGZ/@@download/ENCFF554MGZ.fastq.gz HiSeq 2000 /files/ENCFF974UBB/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF228VLO fastq reads ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF554MGZ 1972992409 Richard Myers, HAIB e67810a9f1b97cef714fe103ec8745e0 SRA:SRR6214368 https://www.encodeproject.org/files/ENCFF228VLO/@@download/ENCFF228VLO.fastq.gz HiSeq 2000 /files/ENCFF588NFI/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF389KOZ bam unfiltered alignments ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF228VLO, ENCFF554MGZ, ENCFF807MUK 4541240812 ENCODE Processing Pipeline 58de2ee4282c48215b1e74ccf2c5d001 https://www.encodeproject.org/files/ENCFF389KOZ/@@download/ENCFF389KOZ.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF735WJM bam alignments ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF228VLO, ENCFF554MGZ, ENCFF807MUK 3250141801 ENCODE Processing Pipeline 673a63e39a0322470bae47cd8bba3494 https://www.encodeproject.org/files/ENCFF735WJM/@@download/ENCFF735WJM.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF665GNK bam unfiltered alignments ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF228VLO, ENCFF554MGZ, ENCFF643CGH 4555624798 ENCODE Processing Pipeline 8037bc262218d8dbb13b5ba7911a664d https://www.encodeproject.org/files/ENCFF665GNK/@@download/ENCFF665GNK.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF644RTP bam alignments ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF228VLO, ENCFF554MGZ, ENCFF643CGH 3251892550 ENCODE Processing Pipeline 5a43d57aea6d627ea5c59f27b585b727 https://www.encodeproject.org/files/ENCFF644RTP/@@download/ENCFF644RTP.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF135IWU bigWig signal p-value ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF644RTP 1063966765 ENCODE Processing Pipeline c50688256f6a4382512c0475d1c4ab0b https://www.encodeproject.org/files/ENCFF135IWU/@@download/ENCFF135IWU.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF718FJH bigWig fold change over control ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF644RTP 1135444743 ENCODE Processing Pipeline ff0f08f25df598529e020ec51fdf3b5d https://www.encodeproject.org/files/ENCFF718FJH/@@download/ENCFF718FJH.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF242HMY bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF169GVB, ENCFF419RSJ 4518 ENCODE Processing Pipeline ff0e7ed8304a0b1f8c2ee3698ab4de69 https://www.encodeproject.org/files/ENCFF242HMY/@@download/ENCFF242HMY.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF169GVB bed narrowPeak peaks ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF644RTP 5343117 ENCODE Processing Pipeline a840581da60819a2b036cabfabb8d94a https://www.encodeproject.org/files/ENCFF169GVB/@@download/ENCFF169GVB.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF935ITS bigBed narrowPeak peaks ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF169GVB 11608289 ENCODE Processing Pipeline 70ef68a57261b3a181b43055d4d35bb7 https://www.encodeproject.org/files/ENCFF935ITS/@@download/ENCFF935ITS.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF394PKE bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF242HMY 59159 ENCODE Processing Pipeline 93fa1041d215fe8e39a4b79eefe905e7 https://www.encodeproject.org/files/ENCFF394PKE/@@download/ENCFF394PKE.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF002GHA bigWig signal p-value ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF735WJM 1087116062 ENCODE Processing Pipeline dbd5468ea45afb06f102bc8e8c7f1738 https://www.encodeproject.org/files/ENCFF002GHA/@@download/ENCFF002GHA.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF270YIJ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF797HPJ 59382 ENCODE Processing Pipeline 48fcae5d1753187a1f8ef58c12bc5b72 https://www.encodeproject.org/files/ENCFF270YIJ/@@download/ENCFF270YIJ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF737LLC bigWig fold change over control ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF735WJM 1133681515 ENCODE Processing Pipeline 00e177ef3a0721cfa56e0bf7aec4bf49 https://www.encodeproject.org/files/ENCFF737LLC/@@download/ENCFF737LLC.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF169WDW bigBed narrowPeak peaks ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF235SRJ 11593963 ENCODE Processing Pipeline bf975954b4f3d2f882de76cfec9709fb https://www.encodeproject.org/files/ENCFF169WDW/@@download/ENCFF169WDW.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF797HPJ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF235SRJ 4739 ENCODE Processing Pipeline 4a9a281d2872a950814732caac2cbe78 https://www.encodeproject.org/files/ENCFF797HPJ/@@download/ENCFF797HPJ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF235SRJ bed narrowPeak peaks ENCSR877SNO ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF735WJM 5342329 ENCODE Processing Pipeline 76da94379a763d4fc8eef2c2b4c6aa4a https://www.encodeproject.org/files/ENCFF235SRJ/@@download/ENCFF235SRJ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF953YJK fastq reads ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF445QCX 4016137356 Richard Myers, HAIB 69f91e84a704486fae8b7119156f3838 SRA:SRR6214000 https://www.encodeproject.org/files/ENCFF953YJK/@@download/ENCFF953YJK.fastq.gz HiSeq 2000 /files/ENCFF657PTT/ released antibody characterized with exemption ENCFF445QCX fastq reads ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF953YJK 4088303408 Richard Myers, HAIB 7122cba335127231beb871bce9a25f20 SRA:SRR6214000 https://www.encodeproject.org/files/ENCFF445QCX/@@download/ENCFF445QCX.fastq.gz HiSeq 2000 /files/ENCFF946FRP/ released antibody characterized with exemption ENCFF422LKG bam unfiltered alignments ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF445QCX, ENCFF807MUK, ENCFF953YJK 9249815945 ENCODE Processing Pipeline fa533a38ee4c198d850cd03c236dd92c https://www.encodeproject.org/files/ENCFF422LKG/@@download/ENCFF422LKG.bam hg19 released antibody characterized with exemption ENCFF446NOX bam alignments ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF445QCX, ENCFF807MUK, ENCFF953YJK 6725034747 ENCODE Processing Pipeline 41c3fd7bf2955767c07b9c4e0b04f6e7 https://www.encodeproject.org/files/ENCFF446NOX/@@download/ENCFF446NOX.bam hg19 released antibody characterized with exemption ENCFF322UWF bam unfiltered alignments ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF445QCX, ENCFF643CGH, ENCFF953YJK 9286318138 ENCODE Processing Pipeline 0994000eb905745cef8c10971aa250a8 https://www.encodeproject.org/files/ENCFF322UWF/@@download/ENCFF322UWF.bam GRCh38 released antibody characterized with exemption ENCFF648SHM bam alignments ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF445QCX, ENCFF643CGH, ENCFF953YJK 6734618764 ENCODE Processing Pipeline ff63e32ec2b067013c9203066c9a0383 https://www.encodeproject.org/files/ENCFF648SHM/@@download/ENCFF648SHM.bam GRCh38 released antibody characterized with exemption ENCFF917PXT bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF495TAN 117000 ENCODE Processing Pipeline 16503dbb6eda058c5d5183d9a1fc49a2 https://www.encodeproject.org/files/ENCFF917PXT/@@download/ENCFF917PXT.bed.gz hg19 released antibody characterized with exemption ENCFF304NJW bigBed narrowPeak peaks ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF495TAN 11774747 ENCODE Processing Pipeline 101ae771fc82d0ede788c9d6e972f37e https://www.encodeproject.org/files/ENCFF304NJW/@@download/ENCFF304NJW.bigBed hg19 released antibody characterized with exemption ENCFF435NTN bigWig fold change over control ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF446NOX 2067041030 ENCODE Processing Pipeline e32df7459368cb2a0087f0a4d53b76d3 https://www.encodeproject.org/files/ENCFF435NTN/@@download/ENCFF435NTN.bigWig hg19 released antibody characterized with exemption ENCFF395UFY bigWig signal p-value ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF446NOX 1868606352 ENCODE Processing Pipeline 9de26a2f2555b4d428be7b6fe6dd438e https://www.encodeproject.org/files/ENCFF395UFY/@@download/ENCFF395UFY.bigWig hg19 released antibody characterized with exemption ENCFF495TAN bed narrowPeak peaks ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF446NOX 6487954 ENCODE Processing Pipeline 423ecba64b2025257934b472c14c76ad https://www.encodeproject.org/files/ENCFF495TAN/@@download/ENCFF495TAN.bed.gz hg19 released antibody characterized with exemption ENCFF977YLN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF917PXT 287241 ENCODE Processing Pipeline 40906811350c60af9218e7bcbdc0ef72 https://www.encodeproject.org/files/ENCFF977YLN/@@download/ENCFF977YLN.bigBed hg19 released antibody characterized with exemption ENCFF817GCF bigBed narrowPeak peaks ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF698UIT 11795338 ENCODE Processing Pipeline 2bfaba8d9c5c52a40a92d384e76640a5 https://www.encodeproject.org/files/ENCFF817GCF/@@download/ENCFF817GCF.bigBed GRCh38 released antibody characterized with exemption ENCFF939ASQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF616YFR 289100 ENCODE Processing Pipeline 778e041373610af567c193dddf2ea6fb https://www.encodeproject.org/files/ENCFF939ASQ/@@download/ENCFF939ASQ.bigBed GRCh38 released antibody characterized with exemption ENCFF804PLK bigWig signal p-value ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF648SHM 1871380104 ENCODE Processing Pipeline 294701a3732191de14bd2e89241bb573 https://www.encodeproject.org/files/ENCFF804PLK/@@download/ENCFF804PLK.bigWig GRCh38 released antibody characterized with exemption ENCFF902HKG bigWig fold change over control ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF648SHM 2079834187 ENCODE Processing Pipeline b3fe2f0f6893e38734695aa52b6a1662 https://www.encodeproject.org/files/ENCFF902HKG/@@download/ENCFF902HKG.bigWig GRCh38 released antibody characterized with exemption ENCFF698UIT bed narrowPeak peaks ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF648SHM 6493420 ENCODE Processing Pipeline 4e9ba6af3763fdecb31128810d29a183 https://www.encodeproject.org/files/ENCFF698UIT/@@download/ENCFF698UIT.bed.gz GRCh38 released antibody characterized with exemption ENCFF616YFR bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR923WJS ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF698UIT 117093 ENCODE Processing Pipeline 4c0a8b33c9cc7979ce8faee1b291899d https://www.encodeproject.org/files/ENCFF616YFR/@@download/ENCFF616YFR.bed.gz GRCh38 released antibody characterized with exemption ENCFF000OFD bam alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OFJ 772696043 Richard Myers, HAIB 7a783a67ed7aea4391c5140cec7feafb https://www.encodeproject.org/files/ENCFF000OFD/@@download/ENCFF000OFD.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OFE bigBed broadPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZC 220909 Richard Myers, HAIB c9806203496a12e12860c7536eb37844 https://www.encodeproject.org/files/ENCFF000OFE/@@download/ENCFF000OFE.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OFF bigBed broadPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZD 293416 Richard Myers, HAIB c82737450fb21c2dd936abae594674d1 https://www.encodeproject.org/files/ENCFF000OFF/@@download/ENCFF000OFF.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OFG bam alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OFL 1056207172 Richard Myers, HAIB 0cfa41458350658b99695d66e74f9ba3 https://www.encodeproject.org/files/ENCFF000OFG/@@download/ENCFF000OFG.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OFH bigWig raw signal ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 16966639 Richard Myers, HAIB 8c4886c59dd74161b3b27a1a7c3f3b2a https://www.encodeproject.org/files/ENCFF000OFH/@@download/ENCFF000OFH.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OFI bigWig raw signal ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 19629509 Richard Myers, HAIB 235a464cdc48b70604c1b000c5fbd84f https://www.encodeproject.org/files/ENCFF000OFI/@@download/ENCFF000OFI.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OFJ fastq reads ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 751296856 Richard Myers, HAIB e72ca7d9993269eb7f40a3880299f369 https://www.encodeproject.org/files/ENCFF000OFJ/@@download/ENCFF000OFJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OFL fastq reads ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1149210667 Richard Myers, HAIB 6cef27519dd36cce61c68876c5434aa6 https://www.encodeproject.org/files/ENCFF000OFL/@@download/ENCFF000OFL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001TZC bed broadPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 99947 Richard Myers, HAIB 9a74ebe941abbbb80e37aa4a109fa516 https://www.encodeproject.org/files/ENCFF001TZC/@@download/ENCFF001TZC.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001TZD bed broadPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 143731 Richard Myers, HAIB a5699bcac0887e67d851580227431e93 https://www.encodeproject.org/files/ENCFF001TZD/@@download/ENCFF001TZD.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF987KGX bam unfiltered alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OFJ, ENCFF643CGH 928599238 ENCODE Processing Pipeline ce3d6b02d6425a80730823b05685aed6 https://www.encodeproject.org/files/ENCFF987KGX/@@download/ENCFF987KGX.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF988NFK bam alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OFJ, ENCFF643CGH 370145429 ENCODE Processing Pipeline 51fbb4e7057f1a7f2c9e9d133a890ede https://www.encodeproject.org/files/ENCFF988NFK/@@download/ENCFF988NFK.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF549ZSD bam unfiltered alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OFL, ENCFF643CGH 1317909816 ENCODE Processing Pipeline 4237232bd51385c1289a610e0dd8ccd9 https://www.encodeproject.org/files/ENCFF549ZSD/@@download/ENCFF549ZSD.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF274NWP bam alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OFL, ENCFF643CGH 494421293 ENCODE Processing Pipeline cbaddc5924c465b299a5240202eda3fc https://www.encodeproject.org/files/ENCFF274NWP/@@download/ENCFF274NWP.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF716XWN bam unfiltered alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OFJ, ENCFF807MUK 926597563 ENCODE Processing Pipeline 37896d1113b52d3878431b7f39fd0a30 https://www.encodeproject.org/files/ENCFF716XWN/@@download/ENCFF716XWN.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF941CFE bam alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OFJ, ENCFF807MUK 367145102 ENCODE Processing Pipeline 33c6f4dd9a1fba2f0af6b08cd389d665 https://www.encodeproject.org/files/ENCFF941CFE/@@download/ENCFF941CFE.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF767IVC bam unfiltered alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OFL, ENCFF807MUK 1316049960 ENCODE Processing Pipeline f12e6fbe1f3ec368b1a9ba0a925d8213 https://www.encodeproject.org/files/ENCFF767IVC/@@download/ENCFF767IVC.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF059RHP bam alignments ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OFL, ENCFF807MUK 491787371 ENCODE Processing Pipeline 6b527a9b9959e6ba53107a29076f6443 https://www.encodeproject.org/files/ENCFF059RHP/@@download/ENCFF059RHP.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF508BLG bigWig signal p-value ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF988NFK 384071228 ENCODE Processing Pipeline 42f5f69cef70a07cdf59f2e39d738faa https://www.encodeproject.org/files/ENCFF508BLG/@@download/ENCFF508BLG.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF016EVZ bigWig signal p-value ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF274NWP, ENCFF488YYE 375840392 ENCODE Processing Pipeline 2c0bdbfa69274ab68476964cd725d7b0 https://www.encodeproject.org/files/ENCFF016EVZ/@@download/ENCFF016EVZ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF824ZRN bigWig fold change over control ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF988NFK 207309401 ENCODE Processing Pipeline 3c5ea5825c0fc8e87fa54563e4ff2740 https://www.encodeproject.org/files/ENCFF824ZRN/@@download/ENCFF824ZRN.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF102YPZ bigWig fold change over control ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF274NWP, ENCFF488YYE 227959702 ENCODE Processing Pipeline f56a4a6ecbf1b3eb4fbc5e2649b7a858 https://www.encodeproject.org/files/ENCFF102YPZ/@@download/ENCFF102YPZ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF943CFP bigWig signal p-value ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF274NWP, ENCFF488YYE, ENCFF988NFK 465355495 ENCODE Processing Pipeline aa594fa14949f514999c88a1afd4f6ef https://www.encodeproject.org/files/ENCFF943CFP/@@download/ENCFF943CFP.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF821PRO bigWig fold change over control ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF274NWP, ENCFF488YYE, ENCFF988NFK 385137945 ENCODE Processing Pipeline 3f56571162e6ff1c9d190ff1dc0d1518 https://www.encodeproject.org/files/ENCFF821PRO/@@download/ENCFF821PRO.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF153EEZ bed narrowPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF988NFK 4120340 ENCODE Processing Pipeline 6b49291e4998d775982002e09d08fc49 https://www.encodeproject.org/files/ENCFF153EEZ/@@download/ENCFF153EEZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF674UHS bed narrowPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF274NWP, ENCFF488YYE 3943513 ENCODE Processing Pipeline eae49a1a6ce4fc3c2e46ab2630a598d9 https://www.encodeproject.org/files/ENCFF674UHS/@@download/ENCFF674UHS.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF499YDX bed narrowPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF274NWP, ENCFF488YYE, ENCFF988NFK 4636846 ENCODE Processing Pipeline 5451d6a3eb247952a829d18cfab30ec3 https://www.encodeproject.org/files/ENCFF499YDX/@@download/ENCFF499YDX.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF526AWS bigBed narrowPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF153EEZ 8279172 ENCODE Processing Pipeline 7973219511fed11702a67570bfdc7b72 https://www.encodeproject.org/files/ENCFF526AWS/@@download/ENCFF526AWS.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF060KTS bigBed narrowPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF674UHS 8092096 ENCODE Processing Pipeline 2f966bfc61e77250da6d696d485fe169 https://www.encodeproject.org/files/ENCFF060KTS/@@download/ENCFF060KTS.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF902XWM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393NBO 337433 ENCODE Processing Pipeline 4350b3de192099efdb702d411e374319 https://www.encodeproject.org/files/ENCFF902XWM/@@download/ENCFF902XWM.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF884JTF bigBed narrowPeak peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF499YDX 10852341 ENCODE Processing Pipeline db82c9b0ef565bf50642e3c8924a3d45 https://www.encodeproject.org/files/ENCFF884JTF/@@download/ENCFF884JTF.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF393NBO bed narrowPeak conservative idr thresholded peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF153EEZ, ENCFF419RSJ, ENCFF499YDX, ENCFF674UHS 180402 ENCODE Processing Pipeline d6e3ec253234ff66db787119066f20f8 https://www.encodeproject.org/files/ENCFF393NBO/@@download/ENCFF393NBO.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF829SEJ bed narrowPeak optimal idr thresholded peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF153EEZ, ENCFF419RSJ, ENCFF499YDX, ENCFF674UHS 218937 ENCODE Processing Pipeline f401739966d623a6f92819b4c260691b https://www.encodeproject.org/files/ENCFF829SEJ/@@download/ENCFF829SEJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF093MDA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMI ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF829SEJ 466706 ENCODE Processing Pipeline 5da5df3835bc83b4c91ecf0931a370ac https://www.encodeproject.org/files/ENCFF093MDA/@@download/ENCFF093MDA.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF360PQN fastq reads ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF480FWI 1244958508 Richard Myers, HAIB 00304a035bb9de6db1b4af4c602fd9f0 https://www.encodeproject.org/files/ENCFF360PQN/@@download/ENCFF360PQN.fastq.gz HiSeq 2000 /files/ENCFF829TXJ/ released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF480FWI fastq reads ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF360PQN 1320099103 Richard Myers, HAIB 6897c9f81a782ae87e283a928ce3a940 https://www.encodeproject.org/files/ENCFF480FWI/@@download/ENCFF480FWI.fastq.gz HiSeq 2000 /files/ENCFF366SRC/ released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF138ZUP bam unfiltered alignments ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF360PQN, ENCFF480FWI, ENCFF643CGH 1982751481 ENCODE Processing Pipeline c293cce51aedd54c54042f0820a56663 https://www.encodeproject.org/files/ENCFF138ZUP/@@download/ENCFF138ZUP.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF509TKU bam unfiltered alignments ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF360PQN, ENCFF480FWI, ENCFF807MUK 1983550138 ENCODE Processing Pipeline f0f78ce0ed80863843d8984b816848ed https://www.encodeproject.org/files/ENCFF509TKU/@@download/ENCFF509TKU.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF798LQE bam alignments ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF360PQN, ENCFF480FWI, ENCFF807MUK 817755160 ENCODE Processing Pipeline f72096139b30f160a44d8c5373e0a977 https://www.encodeproject.org/files/ENCFF798LQE/@@download/ENCFF798LQE.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF246PZZ bam alignments ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF360PQN, ENCFF480FWI, ENCFF643CGH 817653362 ENCODE Processing Pipeline 4dcf1a27a91c76281f0d3cf80454f492 https://www.encodeproject.org/files/ENCFF246PZZ/@@download/ENCFF246PZZ.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF341DIQ bed narrowPeak peaks ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF246PZZ, ENCFF845FAE 5753094 ENCODE Processing Pipeline 240aaec7b27d43a9efe147b600eb71c5 https://www.encodeproject.org/files/ENCFF341DIQ/@@download/ENCFF341DIQ.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF925AHZ bigWig signal p-value ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF246PZZ, ENCFF845FAE 758212823 ENCODE Processing Pipeline 867bb705902ea9e8fd316cdc61f36690 https://www.encodeproject.org/files/ENCFF925AHZ/@@download/ENCFF925AHZ.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF216SHO bigWig fold change over control ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF798LQE, ENCFF938LSW 275050821 ENCODE Processing Pipeline 64245b99d27e6e29bdc4c671f6a88d02 https://www.encodeproject.org/files/ENCFF216SHO/@@download/ENCFF216SHO.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF746HRF bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF669ZUC 2276392 ENCODE Processing Pipeline 47cf23877c7622ef87a664400438ffdc https://www.encodeproject.org/files/ENCFF746HRF/@@download/ENCFF746HRF.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF899PIK bigBed narrowPeak peaks ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF341DIQ 11393517 ENCODE Processing Pipeline c428efc500b18a023704abe8beacede6 https://www.encodeproject.org/files/ENCFF899PIK/@@download/ENCFF899PIK.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF948LKS bigWig fold change over control ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF246PZZ, ENCFF845FAE 273882526 ENCODE Processing Pipeline 04fa0b04f32c22c26f2cd6564311e5df https://www.encodeproject.org/files/ENCFF948LKS/@@download/ENCFF948LKS.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF039JXQ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF341DIQ, ENCFF419RSJ 1345491 ENCODE Processing Pipeline 4e56f01cd7f884ca316bf3b10d71e38c https://www.encodeproject.org/files/ENCFF039JXQ/@@download/ENCFF039JXQ.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF834DYY bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF039JXQ 2306016 ENCODE Processing Pipeline 9f7d4d42f174b2e143f5102cefd30a1f https://www.encodeproject.org/files/ENCFF834DYY/@@download/ENCFF834DYY.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF926NLY bigWig signal p-value ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF798LQE, ENCFF938LSW 757709204 ENCODE Processing Pipeline 669574909e7dec17f8a599f1ff6e9ce3 https://www.encodeproject.org/files/ENCFF926NLY/@@download/ENCFF926NLY.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF432CDE bigBed narrowPeak peaks ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF433LTF 10737899 ENCODE Processing Pipeline 9a6632d6cc78e19f02870f3e22800eb5 https://www.encodeproject.org/files/ENCFF432CDE/@@download/ENCFF432CDE.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF433LTF bed narrowPeak peaks ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF798LQE, ENCFF938LSW 5395544 ENCODE Processing Pipeline b834ba2e51cd730a1b84fb4583a96895 https://www.encodeproject.org/files/ENCFF433LTF/@@download/ENCFF433LTF.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF669ZUC bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR919UCY ChIP-seq UBERON:0000996 vagina tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF433LTF 1330397 ENCODE Processing Pipeline c3d57dc09397285c2a2e21e72408eb3e https://www.encodeproject.org/files/ENCFF669ZUC/@@download/ENCFF669ZUC.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity experiment not submitted to GEO ENCFF950IWA fastq reads ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF071FDH 1988716545 Richard Myers, HAIB b1e5a6bd69297652088e02b5324b9e4a SRA:SRR6213684 https://www.encodeproject.org/files/ENCFF950IWA/@@download/ENCFF950IWA.fastq.gz HiSeq 2000 /files/ENCFF877SGG/ released antibody characterized with exemption ENCFF071FDH fastq reads ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF950IWA 2083765267 Richard Myers, HAIB cac209eef465c298032a2caf9df95eb7 SRA:SRR6213684 https://www.encodeproject.org/files/ENCFF071FDH/@@download/ENCFF071FDH.fastq.gz HiSeq 2000 /files/ENCFF332OUJ/ released antibody characterized with exemption ENCFF037XHJ bam unfiltered alignments ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF071FDH, ENCFF643CGH, ENCFF950IWA 4927019358 ENCODE Processing Pipeline b6d567b897aeb5ee645f94acff596a09 https://www.encodeproject.org/files/ENCFF037XHJ/@@download/ENCFF037XHJ.bam GRCh38 released antibody characterized with exemption ENCFF004NBT bam unfiltered alignments ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF071FDH, ENCFF807MUK, ENCFF950IWA 4908614515 ENCODE Processing Pipeline 1304a5ce271f4db5f5def7d480961350 https://www.encodeproject.org/files/ENCFF004NBT/@@download/ENCFF004NBT.bam hg19 released antibody characterized with exemption ENCFF997UGV bam alignments ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF071FDH, ENCFF643CGH, ENCFF950IWA 3415674245 ENCODE Processing Pipeline 35c9165d6c53387b55746956822b78e7 https://www.encodeproject.org/files/ENCFF997UGV/@@download/ENCFF997UGV.bam GRCh38 released antibody characterized with exemption ENCFF983YSM bam alignments ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF071FDH, ENCFF807MUK, ENCFF950IWA 3412522816 ENCODE Processing Pipeline 860524ece3c39808668a3e45c6f1c6c1 https://www.encodeproject.org/files/ENCFF983YSM/@@download/ENCFF983YSM.bam hg19 released antibody characterized with exemption ENCFF743ZCR bigWig signal p-value ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF997UGV 1327119434 ENCODE Processing Pipeline 7f8f38fc0f46ce6ce1252e8c9fef0f77 https://www.encodeproject.org/files/ENCFF743ZCR/@@download/ENCFF743ZCR.bigWig GRCh38 released antibody characterized with exemption ENCFF503NAW bed narrowPeak peaks ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF997UGV 6458128 ENCODE Processing Pipeline 8b19092b4eaf3495453b34b0a3a2ca6b https://www.encodeproject.org/files/ENCFF503NAW/@@download/ENCFF503NAW.bed.gz GRCh38 released antibody characterized with exemption ENCFF806MYT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF469SGL 258845 ENCODE Processing Pipeline 2705070e609d4adc283bd9bb2b466c1a https://www.encodeproject.org/files/ENCFF806MYT/@@download/ENCFF806MYT.bigBed GRCh38 released antibody characterized with exemption ENCFF429UPL bigWig fold change over control ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF997UGV 1158128145 ENCODE Processing Pipeline de7e273158f2dae51f157453234c3445 https://www.encodeproject.org/files/ENCFF429UPL/@@download/ENCFF429UPL.bigWig GRCh38 released antibody characterized with exemption ENCFF083OYL bigBed narrowPeak peaks ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF503NAW 11276525 ENCODE Processing Pipeline 8e75df1527fdcf9e8f17d5fa27cf918f https://www.encodeproject.org/files/ENCFF083OYL/@@download/ENCFF083OYL.bigBed GRCh38 released antibody characterized with exemption ENCFF469SGL bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF503NAW 106388 ENCODE Processing Pipeline 1e0153d9b1b3b432b8b392f0c1b45a75 https://www.encodeproject.org/files/ENCFF469SGL/@@download/ENCFF469SGL.bed.gz GRCh38 released antibody characterized with exemption ENCFF943ARA bigWig signal p-value ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF983YSM 1092343351 ENCODE Processing Pipeline 8103ff813e3b76f1275732ada69fbcfa https://www.encodeproject.org/files/ENCFF943ARA/@@download/ENCFF943ARA.bigWig hg19 released antibody characterized with exemption ENCFF957SWT bigWig fold change over control ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF983YSM 1146537691 ENCODE Processing Pipeline 3ec3c63bc738588643036ae40afef6e4 https://www.encodeproject.org/files/ENCFF957SWT/@@download/ENCFF957SWT.bigWig hg19 released antibody characterized with exemption ENCFF215GON bigBed narrowPeak peaks ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF506XWQ 11270184 ENCODE Processing Pipeline c895ab6d523bf6a912ba3317bd040730 https://www.encodeproject.org/files/ENCFF215GON/@@download/ENCFF215GON.bigBed hg19 released antibody characterized with exemption ENCFF506XWQ bed narrowPeak peaks ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF983YSM 6431186 ENCODE Processing Pipeline 987169f530e84dbad71415b43f57d6fc https://www.encodeproject.org/files/ENCFF506XWQ/@@download/ENCFF506XWQ.bed.gz hg19 released antibody characterized with exemption ENCFF887XGB bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF506XWQ 105193 ENCODE Processing Pipeline 2b29a3f7a0da82a5ccf7a9600485571f https://www.encodeproject.org/files/ENCFF887XGB/@@download/ENCFF887XGB.bed.gz hg19 released antibody characterized with exemption ENCFF805NBE bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR684NJD ChIP-seq UBERON:0000945 stomach tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF887XGB 255004 ENCODE Processing Pipeline 16f7ddc93d1c81a1b51f1224004d12e9 https://www.encodeproject.org/files/ENCFF805NBE/@@download/ENCFF805NBE.bigBed hg19 released antibody characterized with exemption ENCFF751ZBO fastq reads ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF326ZSE 1987396310 Richard Myers, HAIB a0fed4a413207ca8a62310bddb008a3a SRA:SRR6213922 https://www.encodeproject.org/files/ENCFF751ZBO/@@download/ENCFF751ZBO.fastq.gz HiSeq 2000 /files/ENCFF853XWN/ released control low read depth, antibody characterized with exemption ENCFF326ZSE fastq reads ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF751ZBO 2030986663 Richard Myers, HAIB 65575e699fc146ce976e218f63a17825 SRA:SRR6213922 https://www.encodeproject.org/files/ENCFF326ZSE/@@download/ENCFF326ZSE.fastq.gz HiSeq 2000 /files/ENCFF555QUG/ released control low read depth, antibody characterized with exemption ENCFF076HWD bam unfiltered alignments ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF326ZSE, ENCFF643CGH, ENCFF751ZBO 4887748249 ENCODE Processing Pipeline 74826ccdaf4934dddba4ed7b909fcd6f https://www.encodeproject.org/files/ENCFF076HWD/@@download/ENCFF076HWD.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF044SBQ bam unfiltered alignments ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF326ZSE, ENCFF751ZBO, ENCFF807MUK 4866242257 ENCODE Processing Pipeline bbc6b7232596cf272b9b5502a6db01f8 https://www.encodeproject.org/files/ENCFF044SBQ/@@download/ENCFF044SBQ.bam hg19 released control low read depth, antibody characterized with exemption ENCFF211ZVW bam alignments ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF326ZSE, ENCFF643CGH, ENCFF751ZBO 3661102170 ENCODE Processing Pipeline c7da4ed9bde4b1b0bc8f40b7ccd9b88c https://www.encodeproject.org/files/ENCFF211ZVW/@@download/ENCFF211ZVW.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF392TYJ bam alignments ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF326ZSE, ENCFF751ZBO, ENCFF807MUK 3658628403 ENCODE Processing Pipeline bb29f62e762b89ff7d934b5c482b779d https://www.encodeproject.org/files/ENCFF392TYJ/@@download/ENCFF392TYJ.bam hg19 released control low read depth, antibody characterized with exemption ENCFF363GGJ bed narrowPeak peaks ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF211ZVW 4308903 ENCODE Processing Pipeline c13470b21b8d51d8a147392f0c234f65 https://www.encodeproject.org/files/ENCFF363GGJ/@@download/ENCFF363GGJ.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF165XSM bigWig signal p-value ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF211ZVW 528093417 ENCODE Processing Pipeline 95e1f82c8c01c2a95aa0de9c6f912d54 https://www.encodeproject.org/files/ENCFF165XSM/@@download/ENCFF165XSM.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF049ZCB bigWig fold change over control ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF211ZVW 912403133 ENCODE Processing Pipeline 1767e6167ce741f89f94fbcf1913da7f https://www.encodeproject.org/files/ENCFF049ZCB/@@download/ENCFF049ZCB.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF049AQD bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF079CRY 80228 ENCODE Processing Pipeline 3d32433fcea0b4d0935d3449c852ac87 https://www.encodeproject.org/files/ENCFF049AQD/@@download/ENCFF049AQD.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF018YQT bigBed narrowPeak peaks ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF363GGJ 11394799 ENCODE Processing Pipeline ce7b0d691139653efdbf9debfd077fff https://www.encodeproject.org/files/ENCFF018YQT/@@download/ENCFF018YQT.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF079CRY bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF363GGJ, ENCFF419RSJ 1642 ENCODE Processing Pipeline 9da9f1274242f43a7e81150dcbc6b981 https://www.encodeproject.org/files/ENCFF079CRY/@@download/ENCFF079CRY.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF287TWL bigWig signal p-value ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF392TYJ 527672786 ENCODE Processing Pipeline c43ddba2c5a422daf084f2d0190f83bf https://www.encodeproject.org/files/ENCFF287TWL/@@download/ENCFF287TWL.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF274HVH bigBed narrowPeak peaks ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF640NTC 11364924 ENCODE Processing Pipeline 9c3647f8d84cb4a303fe8dac64517632 https://www.encodeproject.org/files/ENCFF274HVH/@@download/ENCFF274HVH.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF280TSK bigWig fold change over control ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF392TYJ 906921061 ENCODE Processing Pipeline c8a693ec93ba774a89e980d6ceeddb5c https://www.encodeproject.org/files/ENCFF280TSK/@@download/ENCFF280TSK.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF640NTC bed narrowPeak peaks ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF392TYJ 4311906 ENCODE Processing Pipeline 65048a4c70c6c1c54868134545226084 https://www.encodeproject.org/files/ENCFF640NTC/@@download/ENCFF640NTC.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF052QTX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF640NTC 822 ENCODE Processing Pipeline ef32e319c3014e04386c902bb49f584b https://www.encodeproject.org/files/ENCFF052QTX/@@download/ENCFF052QTX.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF744NRV bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR704IJM ChIP-seq UBERON:0001157 transverse colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF052QTX 16081 ENCODE Processing Pipeline ad61c07e723b9ea2d02403d149e04ff4 https://www.encodeproject.org/files/ENCFF744NRV/@@download/ENCFF744NRV.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF000RIT bam alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000RJG 1127089770 Richard Myers, HAIB f5010fd5fc3b66172ec9293e20d3b05c https://www.encodeproject.org/files/ENCFF000RIT/@@download/ENCFF000RIT.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000RIU bigBed broadPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001URN 161229 Richard Myers, HAIB 93420a864dc791f1374762e750c293df https://www.encodeproject.org/files/ENCFF000RIU/@@download/ENCFF000RIU.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000RIV bigBed broadPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001URO 147817 Richard Myers, HAIB 1eef5d07824e4b1f9095021372a1c46d https://www.encodeproject.org/files/ENCFF000RIV/@@download/ENCFF000RIV.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000RIW bam alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000RJM 1746272649 Richard Myers, HAIB 1f6d2d84a9cb254fb89429b25f5eae0b https://www.encodeproject.org/files/ENCFF000RIW/@@download/ENCFF000RIW.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000RIZ bigWig raw signal ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 127938232 Richard Myers, HAIB 47fc495e82892e06278682301fee950a https://www.encodeproject.org/files/ENCFF000RIZ/@@download/ENCFF000RIZ.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000RJA bigWig raw signal ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 244193851 Richard Myers, HAIB bdb63a914b353073a8b7cc57c12098d8 https://www.encodeproject.org/files/ENCFF000RJA/@@download/ENCFF000RJA.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000RJG fastq reads ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1124276847 Richard Myers, HAIB 397275e62e8c75e4ed955cb25468bc05 https://www.encodeproject.org/files/ENCFF000RJG/@@download/ENCFF000RJG.fastq.gz HiSeq 2000 /files/ENCFF000RJY/ released low read depth biological replicates with identical biosample ENCFF000RJM fastq reads ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1758957253 Richard Myers, HAIB d4c2d0f4d4738eda84a6d02c32305b4d https://www.encodeproject.org/files/ENCFF000RJM/@@download/ENCFF000RJM.fastq.gz HiSeq 2000 /files/ENCFF000RJY/ released low read depth biological replicates with identical biosample ENCFF001URN bed broadPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 70734 Richard Myers, HAIB 45e1460fb11fd3d917ae28267ec32dd4 https://www.encodeproject.org/files/ENCFF001URN/@@download/ENCFF001URN.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF001URO bed broadPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 62439 Richard Myers, HAIB a507f30809b7e1ef6f188bfa5e32c6f3 https://www.encodeproject.org/files/ENCFF001URO/@@download/ENCFF001URO.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF794NQC bam alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000RJG, ENCFF643CGH 939515617 ENCODE Processing Pipeline 766f63f42f17fe494c797d49f12baf4a https://www.encodeproject.org/files/ENCFF794NQC/@@download/ENCFF794NQC.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF421GCC bam unfiltered alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000RJM, ENCFF643CGH 1889286821 ENCODE Processing Pipeline 92cba5e6b8c7b9cd2aa77cdc08535e2e https://www.encodeproject.org/files/ENCFF421GCC/@@download/ENCFF421GCC.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF356EIA bam alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000RJG, ENCFF807MUK 939738927 ENCODE Processing Pipeline 3f3db672195fe98601775adda769d24d https://www.encodeproject.org/files/ENCFF356EIA/@@download/ENCFF356EIA.bam hg19 released low read depth biological replicates with identical biosample ENCFF151THN bam unfiltered alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000RJG, ENCFF643CGH 1218660862 ENCODE Processing Pipeline 64dbc1efe9d2accbadbf3ba3132e58a7 https://www.encodeproject.org/files/ENCFF151THN/@@download/ENCFF151THN.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF742ZML bam unfiltered alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000RJM, ENCFF807MUK 1881311731 ENCODE Processing Pipeline bd1b8b1343bebc26aa01b095dea9dbc7 https://www.encodeproject.org/files/ENCFF742ZML/@@download/ENCFF742ZML.bam hg19 released low read depth biological replicates with identical biosample ENCFF113BIW bam unfiltered alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000RJG, ENCFF807MUK 1214441395 ENCODE Processing Pipeline 232c3135e2e66c8497953a1b928171cb https://www.encodeproject.org/files/ENCFF113BIW/@@download/ENCFF113BIW.bam hg19 released low read depth biological replicates with identical biosample ENCFF596HMK bam alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000RJM, ENCFF807MUK 1446527077 ENCODE Processing Pipeline 9a41adcfc61fa936fcd1f557de5a1986 https://www.encodeproject.org/files/ENCFF596HMK/@@download/ENCFF596HMK.bam hg19 released low read depth biological replicates with identical biosample ENCFF511JPZ bam alignments ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000RJM, ENCFF643CGH 1446556281 ENCODE Processing Pipeline 87d5de2b557d3294015343a66c4f6932 https://www.encodeproject.org/files/ENCFF511JPZ/@@download/ENCFF511JPZ.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF900WNY bigWig signal p-value ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF356EIA, ENCFF370NFJ 521822648 ENCODE Processing Pipeline 42fcb4b3d74078dfb0027aedf4f6bf57 https://www.encodeproject.org/files/ENCFF900WNY/@@download/ENCFF900WNY.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF664URQ bigWig signal p-value ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF370NFJ, ENCFF596HMK 602506392 ENCODE Processing Pipeline b31f72ba6cef845a10f4d5727d152288 https://www.encodeproject.org/files/ENCFF664URQ/@@download/ENCFF664URQ.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF289KHP bed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF356EIA, ENCFF370NFJ 5301930 ENCODE Processing Pipeline 54692f54484dbc45dd5b24f97827cf46 https://www.encodeproject.org/files/ENCFF289KHP/@@download/ENCFF289KHP.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF311RHP bigBed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF289KHP 10989860 ENCODE Processing Pipeline 93f65624767b227df839a671101f3ef2 https://www.encodeproject.org/files/ENCFF311RHP/@@download/ENCFF311RHP.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF370VUY bigBed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF772MXQ 10948358 ENCODE Processing Pipeline f83df330afe7b9b42f0425d3e7f835b6 https://www.encodeproject.org/files/ENCFF370VUY/@@download/ENCFF370VUY.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF849QQY bigWig fold change over control ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF356EIA, ENCFF370NFJ 483766141 ENCODE Processing Pipeline 55efcf197467ed73a7024006b27f35e1 https://www.encodeproject.org/files/ENCFF849QQY/@@download/ENCFF849QQY.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF559XYD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF222ANT 287161 ENCODE Processing Pipeline 9ba9954fc1a387a9e989d10a63f2aaed https://www.encodeproject.org/files/ENCFF559XYD/@@download/ENCFF559XYD.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF274TYW bed narrowPeak optimal idr thresholded peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF242EJE, ENCFF289KHP, ENCFF772MXQ 164639 ENCODE Processing Pipeline a0226d35a19d707f0c8598c8549dc61d https://www.encodeproject.org/files/ENCFF274TYW/@@download/ENCFF274TYW.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF441QXC bigWig signal p-value ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF356EIA, ENCFF370NFJ, ENCFF596HMK 931683610 ENCODE Processing Pipeline b754dc427101d21020c768a1ab152044 https://www.encodeproject.org/files/ENCFF441QXC/@@download/ENCFF441QXC.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF408HVX bigWig fold change over control ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF370NFJ, ENCFF596HMK 613004944 ENCODE Processing Pipeline 64985ccc0e79292de7ab239b82524b02 https://www.encodeproject.org/files/ENCFF408HVX/@@download/ENCFF408HVX.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF772MXQ bed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF370NFJ, ENCFF596HMK 5174309 ENCODE Processing Pipeline f31d5c2f414ed1d0e8227375ba4456a0 https://www.encodeproject.org/files/ENCFF772MXQ/@@download/ENCFF772MXQ.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF242EJE bed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF356EIA, ENCFF370NFJ, ENCFF596HMK 5929848 ENCODE Processing Pipeline 0e5a0f72147a98ce868e4b9e5da62682 https://www.encodeproject.org/files/ENCFF242EJE/@@download/ENCFF242EJE.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF667DBD bigBed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF242EJE 11165344 ENCODE Processing Pipeline 1e30152b063d37de7c3b08a58544b8e7 https://www.encodeproject.org/files/ENCFF667DBD/@@download/ENCFF667DBD.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF222ANT bed narrowPeak conservative idr thresholded peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF242EJE, ENCFF289KHP, ENCFF772MXQ 124710 ENCODE Processing Pipeline 12441bfe86a843084384dc10b6535417 https://www.encodeproject.org/files/ENCFF222ANT/@@download/ENCFF222ANT.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF215AGB bigWig fold change over control ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF356EIA, ENCFF370NFJ, ENCFF596HMK 925369351 ENCODE Processing Pipeline 42f5d68228453c812c8cec0ce8958ce4 https://www.encodeproject.org/files/ENCFF215AGB/@@download/ENCFF215AGB.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF005KIN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF274TYW 347839 ENCODE Processing Pipeline b1013ca73fceee11763b45bd49c5ab1e https://www.encodeproject.org/files/ENCFF005KIN/@@download/ENCFF005KIN.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF193WJC bigWig signal p-value ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF719KPR, ENCFF794NQC 608782309 ENCODE Processing Pipeline c43f9d085d09164eb9413c25cdf9e75d https://www.encodeproject.org/files/ENCFF193WJC/@@download/ENCFF193WJC.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF114OBJ bed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF719KPR, ENCFF794NQC 5176273 ENCODE Processing Pipeline f5cf466fcada3cf7eebe513acb613718 https://www.encodeproject.org/files/ENCFF114OBJ/@@download/ENCFF114OBJ.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF723KWI bigBed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF114OBJ 11006196 ENCODE Processing Pipeline 9960511398faec4ed1f196012bfd69be https://www.encodeproject.org/files/ENCFF723KWI/@@download/ENCFF723KWI.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF189GNX bigWig signal p-value ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF511JPZ, ENCFF719KPR, ENCFF794NQC 906093068 ENCODE Processing Pipeline 23b61970f09459490262a99a498afb94 https://www.encodeproject.org/files/ENCFF189GNX/@@download/ENCFF189GNX.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF407QCB bigWig fold change over control ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF511JPZ, ENCFF719KPR 646331440 ENCODE Processing Pipeline 1402c69fea09dea87384124d5a658071 https://www.encodeproject.org/files/ENCFF407QCB/@@download/ENCFF407QCB.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF809ANI bigBed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF059RDK 10954142 ENCODE Processing Pipeline f46bd39a82d04ec7440df7933cb9c872 https://www.encodeproject.org/files/ENCFF809ANI/@@download/ENCFF809ANI.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF050GFU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF946YUA 347677 ENCODE Processing Pipeline 6c6dc5d2cabd9b38ee6216bd450f9d48 https://www.encodeproject.org/files/ENCFF050GFU/@@download/ENCFF050GFU.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF970LMA bigWig fold change over control ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF511JPZ, ENCFF719KPR, ENCFF794NQC 898315868 ENCODE Processing Pipeline aad808f35e8342b64455cf14c2b52bc5 https://www.encodeproject.org/files/ENCFF970LMA/@@download/ENCFF970LMA.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF059RDK bed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF511JPZ, ENCFF719KPR 5170914 ENCODE Processing Pipeline 8aef7b05a7c7cc15aba063c06e54be6e https://www.encodeproject.org/files/ENCFF059RDK/@@download/ENCFF059RDK.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF019OJA bigBed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF718MNT 11184199 ENCODE Processing Pipeline 344d483cb1a8671801817eaa1b20988f https://www.encodeproject.org/files/ENCFF019OJA/@@download/ENCFF019OJA.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF779GBG bigWig signal p-value ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF511JPZ, ENCFF719KPR 666090381 ENCODE Processing Pipeline d199f8085745a5c608c377a6a58c9017 https://www.encodeproject.org/files/ENCFF779GBG/@@download/ENCFF779GBG.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF816VPW bigWig fold change over control ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF719KPR, ENCFF794NQC 481736949 ENCODE Processing Pipeline abe43dbc1f607b5d82c74be139a2f735 https://www.encodeproject.org/files/ENCFF816VPW/@@download/ENCFF816VPW.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF946YUA bed narrowPeak optimal idr thresholded peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF059RDK, ENCFF114OBJ, ENCFF419RSJ, ENCFF718MNT 163757 ENCODE Processing Pipeline ac4ce4b0b1281b95b0fde6bfa6a1daf1 https://www.encodeproject.org/files/ENCFF946YUA/@@download/ENCFF946YUA.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF081YPW bed narrowPeak conservative idr thresholded peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF059RDK, ENCFF114OBJ, ENCFF419RSJ, ENCFF718MNT 127872 ENCODE Processing Pipeline 34b257ca95f180fd0d59f0a995aab91c https://www.encodeproject.org/files/ENCFF081YPW/@@download/ENCFF081YPW.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF718MNT bed narrowPeak peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF511JPZ, ENCFF719KPR, ENCFF794NQC 5914796 ENCODE Processing Pipeline 8607367ac20ff406663fc967b16e5c7c https://www.encodeproject.org/files/ENCFF718MNT/@@download/ENCFF718MNT.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF789XPH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BVO ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF081YPW 293488 ENCODE Processing Pipeline e69a52b16d30af55238c208cb1482e24 https://www.encodeproject.org/files/ENCFF789XPH/@@download/ENCFF789XPH.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF000OOI bam alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OOU 534059084 Richard Myers, HAIB 7df5c565319f9c85b2a8e4bb51f448e1 https://www.encodeproject.org/files/ENCFF000OOI/@@download/ENCFF000OOI.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOJ bigBed broadPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBG 82267 Richard Myers, HAIB bb7a0db3f62dc00371e2b7ff23fce66f https://www.encodeproject.org/files/ENCFF000OOJ/@@download/ENCFF000OOJ.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOK bigBed broadPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBH 60836 Richard Myers, HAIB ba5132dcfb55e1409872b89d149fc071 https://www.encodeproject.org/files/ENCFF000OOK/@@download/ENCFF000OOK.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOM bam alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OOX 738447607 Richard Myers, HAIB bb2b48294f55e79391332926c25f1a90 https://www.encodeproject.org/files/ENCFF000OOM/@@download/ENCFF000OOM.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OON bigWig raw signal ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 4497032 Richard Myers, HAIB 427c73a5398f9a8a8bd9c645b664b57a https://www.encodeproject.org/files/ENCFF000OON/@@download/ENCFF000OON.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OOP bigWig raw signal ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 4343489 Richard Myers, HAIB 8f7b39b5b046c16f076aebb7336fa46f https://www.encodeproject.org/files/ENCFF000OOP/@@download/ENCFF000OOP.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OOU fastq reads ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 460171270 Richard Myers, HAIB c5b627b3beafca6ec2cb2caf7e8c8204 https://www.encodeproject.org/files/ENCFF000OOU/@@download/ENCFF000OOU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOX fastq reads ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 688439057 Richard Myers, HAIB c3ea2dd8eef1c5f3159d84ad5df77c19 https://www.encodeproject.org/files/ENCFF000OOX/@@download/ENCFF000OOX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UBG bed broadPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 23668 Richard Myers, HAIB 04f6d3af4c5285bedb1a1de437ed6b48 https://www.encodeproject.org/files/ENCFF001UBG/@@download/ENCFF001UBG.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UBH bed broadPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 9165 Richard Myers, HAIB 68f976689c90084c75cd1317638b704f https://www.encodeproject.org/files/ENCFF001UBH/@@download/ENCFF001UBH.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CIW bed narrowPeak optimal idr thresholded peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 23367 ENCODE Consortium Analysis Working Group 87b3080e3d4809021de0b609dfd15d90 https://www.encodeproject.org/files/ENCFF002CIW/@@download/ENCFF002CIW.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF765GXY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE ENCFF002CIW 81774 ENCODE Consortium a89834895fc533880620580bd88996f7 https://www.encodeproject.org/files/ENCFF765GXY/@@download/ENCFF765GXY.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF953PTA bam alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OOU, ENCFF643CGH 313575489 ENCODE Processing Pipeline f8b9aa321a79dee58f71480fa5da0035 https://www.encodeproject.org/files/ENCFF953PTA/@@download/ENCFF953PTA.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF983LHJ bam unfiltered alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OOU, ENCFF643CGH 618412225 ENCODE Processing Pipeline 876b5c140c9083badee56ada042cd9c2 https://www.encodeproject.org/files/ENCFF983LHJ/@@download/ENCFF983LHJ.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF608UEO bam unfiltered alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOX, ENCFF643CGH 857560501 ENCODE Processing Pipeline 34c7a61f7ea8c59c3ded517916e734c2 https://www.encodeproject.org/files/ENCFF608UEO/@@download/ENCFF608UEO.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF113JVG bam alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOX, ENCFF643CGH 459780381 ENCODE Processing Pipeline a43f6092f2269a073f30b2d0d67a5211 https://www.encodeproject.org/files/ENCFF113JVG/@@download/ENCFF113JVG.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF203RDK bam unfiltered alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOX, ENCFF807MUK 855075546 ENCODE Processing Pipeline d4736faa6332c632fa0a537b92575d91 https://www.encodeproject.org/files/ENCFF203RDK/@@download/ENCFF203RDK.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF362KQB bam alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOX, ENCFF807MUK 460085432 ENCODE Processing Pipeline ff65f6901b9d305840e00da53f9974ba https://www.encodeproject.org/files/ENCFF362KQB/@@download/ENCFF362KQB.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF086OOD bam unfiltered alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OOU, ENCFF807MUK 616578915 ENCODE Processing Pipeline 992e65d8784ce106cdebc9fc874c2af6 https://www.encodeproject.org/files/ENCFF086OOD/@@download/ENCFF086OOD.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF325QSH bam alignments ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OOU, ENCFF807MUK 313873500 ENCODE Processing Pipeline 929eac20b814bc3f62a53fbd63779ca1 https://www.encodeproject.org/files/ENCFF325QSH/@@download/ENCFF325QSH.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF134AJJ bigWig signal p-value ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF953PTA 401989855 ENCODE Processing Pipeline 4b0ba9ddb2cf3429ebff5e8b5b3df9ab https://www.encodeproject.org/files/ENCFF134AJJ/@@download/ENCFF134AJJ.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF795NWA bigWig signal p-value ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF113JVG, ENCFF948LKH 344917911 ENCODE Processing Pipeline 5c0d128a93cc8dbede2ce076e5367105 https://www.encodeproject.org/files/ENCFF795NWA/@@download/ENCFF795NWA.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF668QTN bigBed narrowPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF747HPV 7857731 ENCODE Processing Pipeline adfc21468a3834bfff8990f83cb08125 https://www.encodeproject.org/files/ENCFF668QTN/@@download/ENCFF668QTN.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF232EAA bigWig signal p-value ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF113JVG, ENCFF948LKH, ENCFF953PTA 474978149 ENCODE Processing Pipeline 71f704a00e51dad64ad88919acff99f6 https://www.encodeproject.org/files/ENCFF232EAA/@@download/ENCFF232EAA.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF616GYO bigWig fold change over control ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF953PTA 200064543 ENCODE Processing Pipeline c9f89b645d95890777edd8e7d9003cd3 https://www.encodeproject.org/files/ENCFF616GYO/@@download/ENCFF616GYO.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF475WHI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF799ASV 75016 ENCODE Processing Pipeline 53302a5a61c5ff6bd66d8f2f04cdf44f https://www.encodeproject.org/files/ENCFF475WHI/@@download/ENCFF475WHI.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF838WWX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF063OKB 89760 ENCODE Processing Pipeline cde036d1d6c6514b1f13c6298c1d8f3f https://www.encodeproject.org/files/ENCFF838WWX/@@download/ENCFF838WWX.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF747HPV bed narrowPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF113JVG, ENCFF948LKH 3547621 ENCODE Processing Pipeline ab899ca04d8f09b69c7bddc371069dd4 https://www.encodeproject.org/files/ENCFF747HPV/@@download/ENCFF747HPV.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF498IQF bigWig fold change over control ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF113JVG, ENCFF948LKH, ENCFF953PTA 421807916 ENCODE Processing Pipeline 8355567483ed000c53b52d81df0fcdaf https://www.encodeproject.org/files/ENCFF498IQF/@@download/ENCFF498IQF.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF338ISC bed narrowPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF953PTA 2819444 ENCODE Processing Pipeline f3c42233d2da0b40eb8bfc649de5a749 https://www.encodeproject.org/files/ENCFF338ISC/@@download/ENCFF338ISC.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF044XOD bigBed narrowPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF338ISC 6111675 ENCODE Processing Pipeline a9b5f02dcd91e186bebf4a61ccb78fd9 https://www.encodeproject.org/files/ENCFF044XOD/@@download/ENCFF044XOD.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF413VTX bigWig fold change over control ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF113JVG, ENCFF948LKH 275338736 ENCODE Processing Pipeline ef7bf44f12af319707a571d0db3fea93 https://www.encodeproject.org/files/ENCFF413VTX/@@download/ENCFF413VTX.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF759SBD bed narrowPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF113JVG, ENCFF948LKH, ENCFF953PTA 4064269 ENCODE Processing Pipeline 088d7b7c5fdc76165db1f60af4b148ce https://www.encodeproject.org/files/ENCFF759SBD/@@download/ENCFF759SBD.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF535RPC bigBed narrowPeak peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF759SBD 10681399 ENCODE Processing Pipeline a500a14170d91f636fb42bb054397b3d https://www.encodeproject.org/files/ENCFF535RPC/@@download/ENCFF535RPC.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF799ASV bed narrowPeak conservative idr thresholded peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF338ISC, ENCFF419RSJ, ENCFF747HPV, ENCFF759SBD 13528 ENCODE Processing Pipeline e0ed5c09867e86d36111b53b937e8b92 https://www.encodeproject.org/files/ENCFF799ASV/@@download/ENCFF799ASV.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF063OKB bed narrowPeak optimal idr thresholded peaks ENCSR000BNS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF338ISC, ENCFF419RSJ, ENCFF747HPV, ENCFF759SBD 23332 ENCODE Processing Pipeline e8bebbdea3d446deb3f5f0230d2fe018 https://www.encodeproject.org/files/ENCFF063OKB/@@download/ENCFF063OKB.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QDK bigBed broadPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKT 1468709 Richard Myers, HAIB 5f5c62829a2f7746a0afceab575c44d2 https://www.encodeproject.org/files/ENCFF000QDK/@@download/ENCFF000QDK.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QDL bigBed broadPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKU 1570729 Richard Myers, HAIB df20fcc3d4f72ba9e0cc98a79ca07870 https://www.encodeproject.org/files/ENCFF000QDL/@@download/ENCFF000QDL.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QDM bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QDX 1188633411 Richard Myers, HAIB bbc1875d667b03bf45dadba8c114007d https://www.encodeproject.org/files/ENCFF000QDM/@@download/ENCFF000QDM.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QDN bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QDY 1084199150 Richard Myers, HAIB d2a8c82963d765975a842011aee6e650 https://www.encodeproject.org/files/ENCFF000QDN/@@download/ENCFF000QDN.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QDP bigWig raw signal ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 77697882 Richard Myers, HAIB e8421b5c7bf0f7469f28811a9cc3572d https://www.encodeproject.org/files/ENCFF000QDP/@@download/ENCFF000QDP.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QDQ bigWig raw signal ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 84397178 Richard Myers, HAIB 9006e1f933bf5eb538d8130609202ceb https://www.encodeproject.org/files/ENCFF000QDQ/@@download/ENCFF000QDQ.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QDX fastq reads ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1210086523 Richard Myers, HAIB 792ab7fc24b36de1ed2bd26df78d962d https://www.encodeproject.org/files/ENCFF000QDX/@@download/ENCFF000QDX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QDY fastq reads ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1202184777 Richard Myers, HAIB 5228a4d13ac3faae7a64af1b12c0d9d6 https://www.encodeproject.org/files/ENCFF000QDY/@@download/ENCFF000QDY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF001UKT bed broadPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 761817 Richard Myers, HAIB 565f9ad826cef16de8d415a996a4ad7f https://www.encodeproject.org/files/ENCFF001UKT/@@download/ENCFF001UKT.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF001UKU bed broadPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 895255 Richard Myers, HAIB c28ca2b77ed0744ecc40bf064d950949 https://www.encodeproject.org/files/ENCFF001UKU/@@download/ENCFF001UKU.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CMI bed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 532836 ENCODE Consortium Analysis Working Group 7fe8a69c0507eec9a25e61ba3bca8410 https://www.encodeproject.org/files/ENCFF002CMI/@@download/ENCFF002CMI.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF813NUH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CMI 1402993 ENCODE Consortium b06f8b3d23dd06ddbdac4e4c30926273 https://www.encodeproject.org/files/ENCFF813NUH/@@download/ENCFF813NUH.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF413ABF bam unfiltered alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDX, ENCFF643CGH 1423411199 ENCODE Processing Pipeline a6d50df7fbe1e5c5a980533cc355aa8b https://www.encodeproject.org/files/ENCFF413ABF/@@download/ENCFF413ABF.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF580SKM bam unfiltered alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDY, ENCFF643CGH 1366729153 ENCODE Processing Pipeline bc612bc751703b54f2cb189a912cee69 https://www.encodeproject.org/files/ENCFF580SKM/@@download/ENCFF580SKM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF569DZM bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDX, ENCFF643CGH 906913300 ENCODE Processing Pipeline 1b0bc1603abb69dce28020f3469b7a1e https://www.encodeproject.org/files/ENCFF569DZM/@@download/ENCFF569DZM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF140UJB bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDY, ENCFF643CGH 744417770 ENCODE Processing Pipeline dfeffef05dd93ebb0251b324379048d7 https://www.encodeproject.org/files/ENCFF140UJB/@@download/ENCFF140UJB.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF612KLG bam unfiltered alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDY, ENCFF807MUK 1368956877 ENCODE Processing Pipeline dde0c1ad5abfd1b873ff47ff574b8fc8 https://www.encodeproject.org/files/ENCFF612KLG/@@download/ENCFF612KLG.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF048TRY bam unfiltered alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDX, ENCFF807MUK 1423943675 ENCODE Processing Pipeline ae56b6a47d5f9ce0358ddb50d5a29ea0 https://www.encodeproject.org/files/ENCFF048TRY/@@download/ENCFF048TRY.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF822HFC bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDY, ENCFF807MUK 745061537 ENCODE Processing Pipeline d45e7222baf1f131500d9e5a6de53106 https://www.encodeproject.org/files/ENCFF822HFC/@@download/ENCFF822HFC.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF359UUS bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDX, ENCFF807MUK 907749891 ENCODE Processing Pipeline fcb194ca075724383b600743d6f360da https://www.encodeproject.org/files/ENCFF359UUS/@@download/ENCFF359UUS.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF341OAI bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF569DZM, ENCFF772PJM 203236030 ENCODE Processing Pipeline 2ad99c6d168fe654e62a8c21cdd5435f https://www.encodeproject.org/files/ENCFF341OAI/@@download/ENCFF341OAI.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF537OJY bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140UJB, ENCFF772PJM 204096087 ENCODE Processing Pipeline 0b0f31dc423d05877122642357f9addf https://www.encodeproject.org/files/ENCFF537OJY/@@download/ENCFF537OJY.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF042CRO bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140UJB, ENCFF569DZM, ENCFF772PJM 192470950 ENCODE Processing Pipeline df46a4bcfb7a2c55296211ca9cc91c70 https://www.encodeproject.org/files/ENCFF042CRO/@@download/ENCFF042CRO.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF281XOP bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF569DZM, ENCFF772PJM 296630009 ENCODE Processing Pipeline eefef6d5be23b3f85c3c14e3707d2407 https://www.encodeproject.org/files/ENCFF281XOP/@@download/ENCFF281XOP.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF596NUY bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140UJB, ENCFF772PJM 228072903 ENCODE Processing Pipeline e3495ece33da881f42efc21831d9efeb https://www.encodeproject.org/files/ENCFF596NUY/@@download/ENCFF596NUY.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF125TEX bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140UJB, ENCFF772PJM 6389450 ENCODE Processing Pipeline bcc60babc2cbc5fe323f83b0ddfd8011 https://www.encodeproject.org/files/ENCFF125TEX/@@download/ENCFF125TEX.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF273XOJ bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140UJB, ENCFF569DZM, ENCFF772PJM 6982465 ENCODE Processing Pipeline a42601e81116724d570824c0fd0163d7 https://www.encodeproject.org/files/ENCFF273XOJ/@@download/ENCFF273XOJ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF547IOW bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140UJB, ENCFF569DZM, ENCFF772PJM 451469657 ENCODE Processing Pipeline 080c234a0be1ad37cfa9699d018f92f1 https://www.encodeproject.org/files/ENCFF547IOW/@@download/ENCFF547IOW.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF634MAL bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF569DZM, ENCFF772PJM 6576006 ENCODE Processing Pipeline c72e6c0fa31d60b4d09f812ceb5e5ddf https://www.encodeproject.org/files/ENCFF634MAL/@@download/ENCFF634MAL.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF854UQT bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF634MAL 11972269 ENCODE Processing Pipeline 2a41ae13f19b277ac981105640eec4e8 https://www.encodeproject.org/files/ENCFF854UQT/@@download/ENCFF854UQT.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF867QWZ bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF273XOJ 11784616 ENCODE Processing Pipeline 1c4531aa24809a06d47d479c056a2c90 https://www.encodeproject.org/files/ENCFF867QWZ/@@download/ENCFF867QWZ.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF757ZGV bed narrowPeak conservative idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF125TEX, ENCFF273XOJ, ENCFF419RSJ, ENCFF634MAL 523928 ENCODE Processing Pipeline 5de4c0f1ed3d8f7300df63df129ec0c4 https://www.encodeproject.org/files/ENCFF757ZGV/@@download/ENCFF757ZGV.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF028THW bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF125TEX 11613164 ENCODE Processing Pipeline f683dacf3fdcb8463bc079e5824218eb https://www.encodeproject.org/files/ENCFF028THW/@@download/ENCFF028THW.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF182YZG bed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF125TEX, ENCFF273XOJ, ENCFF419RSJ, ENCFF634MAL 664881 ENCODE Processing Pipeline b944c338bd7ff9253c3498707b9b6b12 https://www.encodeproject.org/files/ENCFF182YZG/@@download/ENCFF182YZG.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF361RZS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF757ZGV 1191290 ENCODE Processing Pipeline 5c7b89b4c5bf24491e0dbc6d50db97dc https://www.encodeproject.org/files/ENCFF361RZS/@@download/ENCFF361RZS.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF843WMB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF182YZG 1409434 ENCODE Processing Pipeline 7a00010453d6a3e66e71479d1d15c7d2 https://www.encodeproject.org/files/ENCFF843WMB/@@download/ENCFF843WMB.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000PDV bam alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PEH 869869124 Richard Myers, HAIB 39b1e17e6b7a365bb0166eaf0ea68062 https://www.encodeproject.org/files/ENCFF000PDV/@@download/ENCFF000PDV.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PDW bigBed broadPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UEW 385747 Richard Myers, HAIB 98e68dfb5934f288e79d1e48818dd7f7 https://www.encodeproject.org/files/ENCFF000PDW/@@download/ENCFF000PDW.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PDX bigBed broadPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UEX 501845 Richard Myers, HAIB ee7a8b05600bfac90974787416d52325 https://www.encodeproject.org/files/ENCFF000PDX/@@download/ENCFF000PDX.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PDY bam alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PEK 1085526317 Richard Myers, HAIB d74f4dfa7d343dd5dd98c07808f06aae https://www.encodeproject.org/files/ENCFF000PDY/@@download/ENCFF000PDY.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PEA bigWig raw signal ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 16207126 Richard Myers, HAIB 787dfc7f5a2caadefa557a46f5301773 https://www.encodeproject.org/files/ENCFF000PEA/@@download/ENCFF000PEA.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PEB bigWig raw signal ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 20606944 Richard Myers, HAIB 25f7b6550f4191fcbc4e97b19f8490f2 https://www.encodeproject.org/files/ENCFF000PEB/@@download/ENCFF000PEB.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PEH fastq reads ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1207751162 Richard Myers, HAIB b76c02d1c76f4eee52abe97d1b3b66e9 https://www.encodeproject.org/files/ENCFF000PEH/@@download/ENCFF000PEH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PFD/ released low read length, low read depth biological replicates with identical biosample ENCFF000PEK fastq reads ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1443531151 Richard Myers, HAIB 1be65b38fad871a260b1113090929b47 https://www.encodeproject.org/files/ENCFF000PEK/@@download/ENCFF000PEK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PFD/ released low read length, low read depth biological replicates with identical biosample ENCFF001UEW bed broadPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 196426 Richard Myers, HAIB 38b7bfc66155801d3fffcdd68e670908 https://www.encodeproject.org/files/ENCFF001UEW/@@download/ENCFF001UEW.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UEX bed broadPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 223891 Richard Myers, HAIB 4a8b8384db63b60a4e1e42deaf2f5a2f https://www.encodeproject.org/files/ENCFF001UEX/@@download/ENCFF001UEX.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CJX bed narrowPeak optimal idr thresholded peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 154682 ENCODE Consortium Analysis Working Group 9fdb5aba41ec5ae9b95ad2a0c5edd14a https://www.encodeproject.org/files/ENCFF002CJX/@@download/ENCFF002CJX.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF860HAF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE ENCFF002CJX 357019 ENCODE Consortium 0d8c05b6337d8d32c24aa877e6315ecc https://www.encodeproject.org/files/ENCFF860HAF/@@download/ENCFF860HAF.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF724YFZ bam unfiltered alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEH, ENCFF643CGH 1468133613 ENCODE Processing Pipeline 2bbc42e45c60008292ebe560f5339479 https://www.encodeproject.org/files/ENCFF724YFZ/@@download/ENCFF724YFZ.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF429GKZ bam alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEH, ENCFF643CGH 607674321 ENCODE Processing Pipeline 7d2562bb1d080813f4a515b67bc53bbf https://www.encodeproject.org/files/ENCFF429GKZ/@@download/ENCFF429GKZ.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF121LQQ bam unfiltered alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PEK, ENCFF643CGH 1763827670 ENCODE Processing Pipeline fe5801be17410554bbbd2d028bf634a1 https://www.encodeproject.org/files/ENCFF121LQQ/@@download/ENCFF121LQQ.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF139VJW bam alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PEK, ENCFF643CGH 755921385 ENCODE Processing Pipeline 167ffb7e11717982d001c00dfc60c082 https://www.encodeproject.org/files/ENCFF139VJW/@@download/ENCFF139VJW.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF157XCQ bam unfiltered alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEH, ENCFF807MUK 1463367060 ENCODE Processing Pipeline befe40dd5057509e33618d90a4e0bbce https://www.encodeproject.org/files/ENCFF157XCQ/@@download/ENCFF157XCQ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF820GCU bam alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEH, ENCFF807MUK 607997635 ENCODE Processing Pipeline 60a6816f1a74ee1a677900ea201ef4fa https://www.encodeproject.org/files/ENCFF820GCU/@@download/ENCFF820GCU.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF762XXI bam unfiltered alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PEK, ENCFF807MUK 1757948220 ENCODE Processing Pipeline 283f8a0de855522504cdd4042002b8b9 https://www.encodeproject.org/files/ENCFF762XXI/@@download/ENCFF762XXI.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF813EGR bam alignments ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PEK, ENCFF807MUK 756237218 ENCODE Processing Pipeline 2212e368d7d1a2cb27f4fd52b62ee6e5 https://www.encodeproject.org/files/ENCFF813EGR/@@download/ENCFF813EGR.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF616GTR bigWig signal p-value ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF429GKZ 379088320 ENCODE Processing Pipeline 2870c4bb7fd422cdd5d853fe53cb6b86 https://www.encodeproject.org/files/ENCFF616GTR/@@download/ENCFF616GTR.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF321UFH bigWig signal p-value ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF139VJW, ENCFF202PGY 480123957 ENCODE Processing Pipeline 7edfedb6922ccc027709e5f8ea79de00 https://www.encodeproject.org/files/ENCFF321UFH/@@download/ENCFF321UFH.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF247LKR bigWig signal p-value ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF139VJW, ENCFF202PGY, ENCFF429GKZ 534572725 ENCODE Processing Pipeline fb6cd128a25adeea919dc5eb54f48e43 https://www.encodeproject.org/files/ENCFF247LKR/@@download/ENCFF247LKR.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF781KRS bigWig fold change over control ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF139VJW, ENCFF202PGY 325055892 ENCODE Processing Pipeline 58ee81ae4fb6507050008a599ad4832f https://www.encodeproject.org/files/ENCFF781KRS/@@download/ENCFF781KRS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF779IFO bigWig fold change over control ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF429GKZ 241959409 ENCODE Processing Pipeline 767793f64ec84aabe6fbc11ed218922f https://www.encodeproject.org/files/ENCFF779IFO/@@download/ENCFF779IFO.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF937PQQ bigWig fold change over control ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF139VJW, ENCFF202PGY, ENCFF429GKZ 489983701 ENCODE Processing Pipeline dfc73c79f2fa025bedae2c10cf91dd96 https://www.encodeproject.org/files/ENCFF937PQQ/@@download/ENCFF937PQQ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF617YZF bed narrowPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF139VJW, ENCFF202PGY, ENCFF429GKZ 4742586 ENCODE Processing Pipeline 915d5b01d971d44d178de0d638a3a71c https://www.encodeproject.org/files/ENCFF617YZF/@@download/ENCFF617YZF.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF041DNK bed narrowPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF429GKZ 3894809 ENCODE Processing Pipeline 5e7679e46f4683d937ced55a53f67398 https://www.encodeproject.org/files/ENCFF041DNK/@@download/ENCFF041DNK.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF936TMP bed narrowPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF139VJW, ENCFF202PGY 4469359 ENCODE Processing Pipeline 530d1fa6a35bc4b4ff7512e3af240f4c https://www.encodeproject.org/files/ENCFF936TMP/@@download/ENCFF936TMP.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF447OAX bigBed narrowPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF041DNK 8354432 ENCODE Processing Pipeline 9de7ee8ee78c818ef8305af6736fc193 https://www.encodeproject.org/files/ENCFF447OAX/@@download/ENCFF447OAX.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF971HKQ bigBed narrowPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF617YZF 10967442 ENCODE Processing Pipeline ea774f4ae55f7652ac1074e85b158d85 https://www.encodeproject.org/files/ENCFF971HKQ/@@download/ENCFF971HKQ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF725KIO bigBed narrowPeak peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF936TMP 10789102 ENCODE Processing Pipeline 0a3c36e5319dd54e5762794ab94f0857 https://www.encodeproject.org/files/ENCFF725KIO/@@download/ENCFF725KIO.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF587GWD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF091UDB 270880 ENCODE Processing Pipeline b8ef86c792f7e62ad3496c25d5a4efb5 https://www.encodeproject.org/files/ENCFF587GWD/@@download/ENCFF587GWD.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF868ZRM bed narrowPeak conservative idr thresholded peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041DNK, ENCFF419RSJ, ENCFF617YZF, ENCFF936TMP 124407 ENCODE Processing Pipeline d73c6b98f33f1dfe9b2e64017f777c5f https://www.encodeproject.org/files/ENCFF868ZRM/@@download/ENCFF868ZRM.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF229RUS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF868ZRM 258627 ENCODE Processing Pipeline 5a79c24cab4d1d023f65683f32162fdd https://www.encodeproject.org/files/ENCFF229RUS/@@download/ENCFF229RUS.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF091UDB bed narrowPeak optimal idr thresholded peaks ENCSR000BHS ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041DNK, ENCFF419RSJ, ENCFF617YZF, ENCFF936TMP 133613 ENCODE Processing Pipeline ab91602f7e72dff5e98912bb758cf5f1 https://www.encodeproject.org/files/ENCFF091UDB/@@download/ENCFF091UDB.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF002BFR fastq reads ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 1 50 single-ended 1453849505 Richard Myers, HAIB 8219972aa733b860009563baac3d08a4 SRA:SRR5331639 https://www.encodeproject.org/files/ENCFF002BFR/@@download/ENCFF002BFR.fastq.gz HiSeq 2000 /files/ENCFF002BGA/ released control low read depth, borderline replicate concordance, low read depth ENCFF697WPB fastq reads ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 1 50 single-ended 1170310914 Richard Myers, HAIB 6f44633b484df3fb934a90e5addfedb3 SRA:SRR5331638 https://www.encodeproject.org/files/ENCFF697WPB/@@download/ENCFF697WPB.fastq.gz HiSeq 2000 /files/ENCFF192IAC/ released control low read depth, borderline replicate concordance, low read depth ENCFF512IQR bam unfiltered alignments ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 50 ENCFF697WPB, ENCFF807MUK 1312077047 ENCODE Processing Pipeline a454c2d9290037f99a530b5dbb5958c0 https://www.encodeproject.org/files/ENCFF512IQR/@@download/ENCFF512IQR.bam hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF145KYA bam unfiltered alignments ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 50 ENCFF002BFR, ENCFF807MUK 1576708037 ENCODE Processing Pipeline d64b3d7acc9559fe3cccf7d72d7ec73d https://www.encodeproject.org/files/ENCFF145KYA/@@download/ENCFF145KYA.bam hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF958XTI bam unfiltered alignments ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 50 ENCFF643CGH, ENCFF697WPB 1311284154 ENCODE Processing Pipeline b03f2290b9f771ba8b098b0c29150e8f https://www.encodeproject.org/files/ENCFF958XTI/@@download/ENCFF958XTI.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF633KZW bam unfiltered alignments ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 50 ENCFF002BFR, ENCFF643CGH 1576502799 ENCODE Processing Pipeline ac8ebbec2ceddf063b10b3aaf20489c2 https://www.encodeproject.org/files/ENCFF633KZW/@@download/ENCFF633KZW.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF598WGZ bam alignments ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 50 ENCFF697WPB, ENCFF807MUK 979001374 ENCODE Processing Pipeline 2377052fae2ee81455e9268d7b6d479b https://www.encodeproject.org/files/ENCFF598WGZ/@@download/ENCFF598WGZ.bam hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF963FTZ bam alignments ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 50 ENCFF643CGH, ENCFF697WPB 986701596 ENCODE Processing Pipeline fdb61e0b08fc7be114df7fbcf24bb8bd https://www.encodeproject.org/files/ENCFF963FTZ/@@download/ENCFF963FTZ.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF179SRP bam alignments ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 50 ENCFF002BFR, ENCFF643CGH 1158305361 ENCODE Processing Pipeline 51bd213bf48846b000540896829e1a06 https://www.encodeproject.org/files/ENCFF179SRP/@@download/ENCFF179SRP.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF199MDR bam alignments ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 50 ENCFF002BFR, ENCFF807MUK 1150353182 ENCODE Processing Pipeline ad9be9055a9f79a7daae6d0491c6123a https://www.encodeproject.org/files/ENCFF199MDR/@@download/ENCFF199MDR.bam hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF717ZUE bigWig signal p-value ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 ENCFF423BBH, ENCFF747NOF, ENCFF963FTZ 767641642 ENCODE Processing Pipeline 936700e8f2b0ebd19006d1b8df0ef0c7 https://www.encodeproject.org/files/ENCFF717ZUE/@@download/ENCFF717ZUE.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF386EXB bigWig fold change over control ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 ENCFF423BBH, ENCFF747NOF, ENCFF963FTZ 507072030 ENCODE Processing Pipeline 2a733472e15c02c5362db7841a0399b7 https://www.encodeproject.org/files/ENCFF386EXB/@@download/ENCFF386EXB.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF717HVY bigWig signal p-value ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 ENCFF179SRP, ENCFF423BBH, ENCFF747NOF 780223217 ENCODE Processing Pipeline 2bec9e378b248c02d17e7235854dac8b https://www.encodeproject.org/files/ENCFF717HVY/@@download/ENCFF717HVY.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF359EOF bigWig signal p-value ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF179SRP, ENCFF423BBH, ENCFF747NOF, ENCFF963FTZ 980179428 ENCODE Processing Pipeline c314654ade1885316eef028391df28d2 https://www.encodeproject.org/files/ENCFF359EOF/@@download/ENCFF359EOF.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF789EFZ bigWig fold change over control ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 ENCFF179SRP, ENCFF423BBH, ENCFF747NOF 531781718 ENCODE Processing Pipeline 894b6dbc48dfeac7bb15dd1dfd3e269b https://www.encodeproject.org/files/ENCFF789EFZ/@@download/ENCFF789EFZ.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF436YJO bigWig fold change over control ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF179SRP, ENCFF423BBH, ENCFF747NOF, ENCFF963FTZ 827580109 ENCODE Processing Pipeline 66d2b2e5f7237ad27c998b6d4d4b7a42 https://www.encodeproject.org/files/ENCFF436YJO/@@download/ENCFF436YJO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF078SOE bed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 ENCFF179SRP, ENCFF423BBH, ENCFF747NOF 5208687 ENCODE Processing Pipeline 2293c9c9d7f2bcd77c62ef6d5d7f285b https://www.encodeproject.org/files/ENCFF078SOE/@@download/ENCFF078SOE.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF043AHC bed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 ENCFF423BBH, ENCFF747NOF, ENCFF963FTZ 5583086 ENCODE Processing Pipeline ab1002a4e7ee46746e3a73b51162598c https://www.encodeproject.org/files/ENCFF043AHC/@@download/ENCFF043AHC.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF017GHB bigBed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 ENCFF043AHC 13427174 ENCODE Processing Pipeline bd7303dd724114c57147146d89c4ef99 https://www.encodeproject.org/files/ENCFF017GHB/@@download/ENCFF017GHB.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF957SDB bigBed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 ENCFF078SOE 11268471 ENCODE Processing Pipeline a8e98b68226f38232087fb56cc1e2473 https://www.encodeproject.org/files/ENCFF957SDB/@@download/ENCFF957SDB.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF938YLS bed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF179SRP, ENCFF423BBH, ENCFF747NOF, ENCFF963FTZ 6275342 ENCODE Processing Pipeline 09cfe5e49e9aaf2ca574d52fdd0e76a9 https://www.encodeproject.org/files/ENCFF938YLS/@@download/ENCFF938YLS.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF334VIL bigBed narrowPeak optimal idr thresholded peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF871LZM 277929 ENCODE Processing Pipeline 5563c269fcc4d3eb08893f461e7ab32e https://www.encodeproject.org/files/ENCFF334VIL/@@download/ENCFF334VIL.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF887EVV bed narrowPeak conservative idr thresholded peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF043AHC, ENCFF078SOE, ENCFF419RSJ, ENCFF938YLS 99422 ENCODE Processing Pipeline 91f350719c5546757d79d3d69ca54949 https://www.encodeproject.org/files/ENCFF887EVV/@@download/ENCFF887EVV.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF309HQG bigBed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF938YLS 13528253 ENCODE Processing Pipeline 2431cc53bfb6051194b613bef8fd6ffd https://www.encodeproject.org/files/ENCFF309HQG/@@download/ENCFF309HQG.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF781QRT bigBed narrowPeak conservative idr thresholded peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF887EVV 242062 ENCODE Processing Pipeline d0eb598d493d2576395f44b894e45971 https://www.encodeproject.org/files/ENCFF781QRT/@@download/ENCFF781QRT.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF871LZM bed narrowPeak optimal idr thresholded peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF043AHC, ENCFF078SOE, ENCFF419RSJ, ENCFF938YLS 122416 ENCODE Processing Pipeline 18c5363d23846665ae270bf20fd17ce2 https://www.encodeproject.org/files/ENCFF871LZM/@@download/ENCFF871LZM.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth ENCFF871XDX bigWig signal p-value ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 ENCFF199MDR, ENCFF787RYL, ENCFF991WDT 707682897 ENCODE Processing Pipeline 99434c281ecf0f108b4de4f7a74beb65 https://www.encodeproject.org/files/ENCFF871XDX/@@download/ENCFF871XDX.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF107OLX bigWig signal p-value ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF199MDR, ENCFF598WGZ, ENCFF787RYL, ENCFF991WDT 773932450 ENCODE Processing Pipeline 757497ade4f01586a0bc875ccce5464e https://www.encodeproject.org/files/ENCFF107OLX/@@download/ENCFF107OLX.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF294NTH bigWig fold change over control ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 ENCFF199MDR, ENCFF787RYL, ENCFF991WDT 535915572 ENCODE Processing Pipeline e9514ae20d620e5c8b845b892efb2e4e https://www.encodeproject.org/files/ENCFF294NTH/@@download/ENCFF294NTH.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF362SVS bigWig fold change over control ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF199MDR, ENCFF598WGZ, ENCFF787RYL, ENCFF991WDT 845961814 ENCODE Processing Pipeline 02adb1103b54a4e3160014ff7bf1d18b https://www.encodeproject.org/files/ENCFF362SVS/@@download/ENCFF362SVS.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF496ZST bigWig signal p-value ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 ENCFF598WGZ, ENCFF787RYL, ENCFF991WDT 666385717 ENCODE Processing Pipeline fc71eb364df28e3d2b7da3055b25d29b https://www.encodeproject.org/files/ENCFF496ZST/@@download/ENCFF496ZST.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF168RYI bed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 ENCFF199MDR, ENCFF787RYL, ENCFF991WDT 5497898 ENCODE Processing Pipeline 63382d019e0fde4f49a5993034e60f45 https://www.encodeproject.org/files/ENCFF168RYI/@@download/ENCFF168RYI.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF634MHG bigBed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 ENCFF025MTA 13428389 ENCODE Processing Pipeline 5b713dc709f1bea21f0d8fee90c34a2a https://www.encodeproject.org/files/ENCFF634MHG/@@download/ENCFF634MHG.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF364KPB bigBed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF500LLP 13535243 ENCODE Processing Pipeline 6b2ba48fecbb02f1ca12f9e192ae6852 https://www.encodeproject.org/files/ENCFF364KPB/@@download/ENCFF364KPB.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF922UWO bed narrowPeak conservative idr thresholded peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF025MTA, ENCFF168RYI, ENCFF500LLP 99146 ENCODE Processing Pipeline 0c72aef876eaf319f80ae883f65aff84 https://www.encodeproject.org/files/ENCFF922UWO/@@download/ENCFF922UWO.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF378HXE bigWig fold change over control ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 ENCFF598WGZ, ENCFF787RYL, ENCFF991WDT 499787136 ENCODE Processing Pipeline bdf72bea22d95bd246c5c524c82faee3 https://www.encodeproject.org/files/ENCFF378HXE/@@download/ENCFF378HXE.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF733CHK bigBed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 2 ENCFF168RYI 11325434 ENCODE Processing Pipeline fd40c55fe77ca7000322916fd94856c7 https://www.encodeproject.org/files/ENCFF733CHK/@@download/ENCFF733CHK.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF468SZX bigBed narrowPeak conservative idr thresholded peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF922UWO 241271 ENCODE Processing Pipeline 468436635e672e00ff378b2d8cffb1d6 https://www.encodeproject.org/files/ENCFF468SZX/@@download/ENCFF468SZX.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF025MTA bed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1 ENCFF598WGZ, ENCFF787RYL, ENCFF991WDT 5657686 ENCODE Processing Pipeline 1332477ed89d41eeebcef99f85c146c5 https://www.encodeproject.org/files/ENCFF025MTA/@@download/ENCFF025MTA.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF500LLP bed narrowPeak peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF199MDR, ENCFF598WGZ, ENCFF787RYL, ENCFF991WDT 6285494 ENCODE Processing Pipeline 3f89439fe4e35543d97ef489e957a713 https://www.encodeproject.org/files/ENCFF500LLP/@@download/ENCFF500LLP.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF374HJR bed narrowPeak optimal idr thresholded peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF025MTA, ENCFF168RYI, ENCFF500LLP 117764 ENCODE Processing Pipeline aa3bef7e4e1504bc5d0fe6d1cb3b61b9 https://www.encodeproject.org/files/ENCFF374HJR/@@download/ENCFF374HJR.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF442QLP bigBed narrowPeak optimal idr thresholded peaks ENCSR016UEH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2016-11-08 ENCODE 1, 2 ENCFF374HJR 270892 ENCODE Processing Pipeline cdd650fbb4d400040ff172a6eeb31421 https://www.encodeproject.org/files/ENCFF442QLP/@@download/ENCFF442QLP.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth ENCFF002BFE fastq reads ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1225156251 Richard Myers, HAIB dccdb7c4a3fbfdb9f9dca2fcaaa13b85 SRA:SRR5338737 https://www.encodeproject.org/files/ENCFF002BFE/@@download/ENCFF002BFE.fastq.gz HiSeq 2000 /files/ENCFF002BFX/ released antibody characterized with exemption, low read depth ENCFF002BFF fastq reads ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1879740746 Richard Myers, HAIB 3b435cd8f84ae47732d0b473a60835a0 SRA:SRR5338738 https://www.encodeproject.org/files/ENCFF002BFF/@@download/ENCFF002BFF.fastq.gz HiSeq 2000 /files/ENCFF002BGD/ released antibody characterized with exemption, low read depth ENCFF968KLZ bigWig fold change over control ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 ENCFF049HWT, ENCFF162VTZ, ENCFF632RLI 479009510 ENCODE Processing Pipeline 4d6ebe4a6a155e9eed72ba482de1a9c9 https://www.encodeproject.org/files/ENCFF968KLZ/@@download/ENCFF968KLZ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF164YNQ bigWig signal p-value ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 ENCFF049HWT, ENCFF162VTZ, ENCFF632RLI 660129579 ENCODE Processing Pipeline dcf8f2909074d0e11f326eb0089f4809 https://www.encodeproject.org/files/ENCFF164YNQ/@@download/ENCFF164YNQ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF173HSS bam unfiltered alignments ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFE, ENCFF643CGH 1325269773 ENCODE Processing Pipeline 0ae191676e4e77a88229ebc00dfc274a https://www.encodeproject.org/files/ENCFF173HSS/@@download/ENCFF173HSS.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF787ECE bam unfiltered alignments ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFF, ENCFF643CGH 2037838244 ENCODE Processing Pipeline 901ec0b479db57e1ad2568a8bb06380e https://www.encodeproject.org/files/ENCFF787ECE/@@download/ENCFF787ECE.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF638HCT bam alignments ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFE, ENCFF643CGH 992394488 ENCODE Processing Pipeline 947144206289900286f330a2b38f7ae6 https://www.encodeproject.org/files/ENCFF638HCT/@@download/ENCFF638HCT.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF883YOY bam alignments ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFF, ENCFF643CGH 1506467409 ENCODE Processing Pipeline d0fb953c04103eff064da516a1fe4515 https://www.encodeproject.org/files/ENCFF883YOY/@@download/ENCFF883YOY.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF536TTK bigWig signal p-value ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 ENCFF113QYJ, ENCFF321TIQ, ENCFF638HCT 688828725 ENCODE Processing Pipeline 3932ff73a162da52da92d008b59665d6 https://www.encodeproject.org/files/ENCFF536TTK/@@download/ENCFF536TTK.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF764OJV bigWig signal p-value ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 ENCFF113QYJ, ENCFF321TIQ, ENCFF883YOY 930668729 ENCODE Processing Pipeline a52095733dd3c18d9269b4cd916adbf0 https://www.encodeproject.org/files/ENCFF764OJV/@@download/ENCFF764OJV.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF415PAE bigWig signal p-value ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF113QYJ, ENCFF321TIQ, ENCFF638HCT, ENCFF883YOY 831154122 ENCODE Processing Pipeline 2b6c217a2e1d8b2c6df786e4bb4006e5 https://www.encodeproject.org/files/ENCFF415PAE/@@download/ENCFF415PAE.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF037HXV bigWig fold change over control ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 ENCFF113QYJ, ENCFF321TIQ, ENCFF638HCT 474719956 ENCODE Processing Pipeline 6571a381309b00214184a6c8ca6616d2 https://www.encodeproject.org/files/ENCFF037HXV/@@download/ENCFF037HXV.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF011XDH bigWig fold change over control ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 ENCFF113QYJ, ENCFF321TIQ, ENCFF883YOY 670912868 ENCODE Processing Pipeline 4d992df094226c60dd68a1850504f821 https://www.encodeproject.org/files/ENCFF011XDH/@@download/ENCFF011XDH.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF615KKS bigWig fold change over control ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF113QYJ, ENCFF321TIQ, ENCFF638HCT, ENCFF883YOY 959955694 ENCODE Processing Pipeline 6bcb8d1b34f2f6dc341cd224735a754c https://www.encodeproject.org/files/ENCFF615KKS/@@download/ENCFF615KKS.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF749CMD bigBed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 ENCFF201VJV 13408378 ENCODE Processing Pipeline f379c83fd981e99ecc7ae6869adc7267 https://www.encodeproject.org/files/ENCFF749CMD/@@download/ENCFF749CMD.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF201VJV bed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 ENCFF113QYJ, ENCFF321TIQ, ENCFF883YOY 5768887 ENCODE Processing Pipeline 093445be744b46274e52e9999f62dea7 https://www.encodeproject.org/files/ENCFF201VJV/@@download/ENCFF201VJV.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF158NBU bed narrowPeak conservative idr thresholded peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF201VJV, ENCFF419RSJ, ENCFF524LUT, ENCFF832QNI 179390 ENCODE Processing Pipeline 16b18a3626ee12ac0d13fd007e35e488 https://www.encodeproject.org/files/ENCFF158NBU/@@download/ENCFF158NBU.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF832QNI bed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 ENCFF113QYJ, ENCFF321TIQ, ENCFF638HCT 5825382 ENCODE Processing Pipeline 3b2b4bfe52f8686ed004498479c1aad3 https://www.encodeproject.org/files/ENCFF832QNI/@@download/ENCFF832QNI.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF524LUT bed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF113QYJ, ENCFF321TIQ, ENCFF638HCT, ENCFF883YOY 6606186 ENCODE Processing Pipeline c73f7a61989dc6e28d885ddaba72876e https://www.encodeproject.org/files/ENCFF524LUT/@@download/ENCFF524LUT.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF570IOD bigBed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 ENCFF832QNI 13235900 ENCODE Processing Pipeline 626c95a1bcb51b851d130c10939bb7da https://www.encodeproject.org/files/ENCFF570IOD/@@download/ENCFF570IOD.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF430GQO bigBed narrowPeak optimal idr thresholded peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF964KDQ 379421 ENCODE Processing Pipeline 6afa3697810c57dbd3d5e3fc7f3a19c6 https://www.encodeproject.org/files/ENCFF430GQO/@@download/ENCFF430GQO.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF642JTY bigBed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF524LUT 13337775 ENCODE Processing Pipeline 1ed6f589a72deaec530f9f1fb347a3c5 https://www.encodeproject.org/files/ENCFF642JTY/@@download/ENCFF642JTY.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF380IKV bigBed narrowPeak conservative idr thresholded peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF158NBU 374413 ENCODE Processing Pipeline 3c623222a0507334e61a24007688347a https://www.encodeproject.org/files/ENCFF380IKV/@@download/ENCFF380IKV.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF964KDQ bed narrowPeak optimal idr thresholded peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF201VJV, ENCFF419RSJ, ENCFF524LUT, ENCFF832QNI 183321 ENCODE Processing Pipeline 0e030190a94a2bf9c0cacfddfe0da664 https://www.encodeproject.org/files/ENCFF964KDQ/@@download/ENCFF964KDQ.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF216ISI bam unfiltered alignments ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFE, ENCFF807MUK 1321880492 ENCODE Processing Pipeline e8f42a754835f71490d77acb59e17ca1 https://www.encodeproject.org/files/ENCFF216ISI/@@download/ENCFF216ISI.bam hg19 released antibody characterized with exemption, low read depth ENCFF372AYI bam unfiltered alignments ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFF, ENCFF807MUK 2030124621 ENCODE Processing Pipeline e8c072cd6731c540b04252048ff91a6d https://www.encodeproject.org/files/ENCFF372AYI/@@download/ENCFF372AYI.bam hg19 released antibody characterized with exemption, low read depth ENCFF162VTZ bam alignments ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFE, ENCFF807MUK 992529429 ENCODE Processing Pipeline 57ad7a86e9d18a9391f565e89355ff08 https://www.encodeproject.org/files/ENCFF162VTZ/@@download/ENCFF162VTZ.bam hg19 released antibody characterized with exemption, low read depth ENCFF373SVA bam alignments ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFF, ENCFF807MUK 1506648939 ENCODE Processing Pipeline 4a3501f52eff5bbe52de34591e294b29 https://www.encodeproject.org/files/ENCFF373SVA/@@download/ENCFF373SVA.bam hg19 released antibody characterized with exemption, low read depth ENCFF801IKW bigWig signal p-value ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF049HWT, ENCFF162VTZ, ENCFF373SVA, ENCFF632RLI 989830008 ENCODE Processing Pipeline 9d24ecc9f0a9edf233b3feaf42d0a5cc https://www.encodeproject.org/files/ENCFF801IKW/@@download/ENCFF801IKW.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF424JEI bigBed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 ENCFF392FYA 13373482 ENCODE Processing Pipeline ecf433ab3a62ec832e003c839c3fc545 https://www.encodeproject.org/files/ENCFF424JEI/@@download/ENCFF424JEI.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF380ONL bigBed narrowPeak optimal idr thresholded peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF974OIC 375805 ENCODE Processing Pipeline 919172adb2b421bc6c35e98bcd64af1d https://www.encodeproject.org/files/ENCFF380ONL/@@download/ENCFF380ONL.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF953WRA bigWig fold change over control ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 ENCFF049HWT, ENCFF373SVA, ENCFF632RLI 664830295 ENCODE Processing Pipeline 61b36b87ca57f2a843ebdc08a0a19990 https://www.encodeproject.org/files/ENCFF953WRA/@@download/ENCFF953WRA.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF640NJO bed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 ENCFF049HWT, ENCFF162VTZ, ENCFF632RLI 5898427 ENCODE Processing Pipeline 71586927917965273b6ddd08788748b3 https://www.encodeproject.org/files/ENCFF640NJO/@@download/ENCFF640NJO.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF796LFD bigWig fold change over control ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF049HWT, ENCFF162VTZ, ENCFF373SVA, ENCFF632RLI 971884768 ENCODE Processing Pipeline c1b472a92ba931d88809261ee2e14859 https://www.encodeproject.org/files/ENCFF796LFD/@@download/ENCFF796LFD.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF236YIV bed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF049HWT, ENCFF162VTZ, ENCFF373SVA, ENCFF632RLI 6606384 ENCODE Processing Pipeline 39079c11f06e03b52817ab5baa7a382c https://www.encodeproject.org/files/ENCFF236YIV/@@download/ENCFF236YIV.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF514WTM bigBed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1 ENCFF640NJO 13234370 ENCODE Processing Pipeline 7e72e537e38c820e284e413166f18f61 https://www.encodeproject.org/files/ENCFF514WTM/@@download/ENCFF514WTM.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF425KBN bigWig signal p-value ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 ENCFF049HWT, ENCFF373SVA, ENCFF632RLI 719686311 ENCODE Processing Pipeline ea5adb7625e04d2f87c015748bc8dcb9 https://www.encodeproject.org/files/ENCFF425KBN/@@download/ENCFF425KBN.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF974OIC bed narrowPeak optimal idr thresholded peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF236YIV, ENCFF392FYA, ENCFF640NJO 181311 ENCODE Processing Pipeline 79e70a2005e90b9615aa7013c7effab6 https://www.encodeproject.org/files/ENCFF974OIC/@@download/ENCFF974OIC.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF392FYA bed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 2 ENCFF049HWT, ENCFF373SVA, ENCFF632RLI 5815654 ENCODE Processing Pipeline 789ea54b22d634605073450e80cc16cd https://www.encodeproject.org/files/ENCFF392FYA/@@download/ENCFF392FYA.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF666YKX bigBed narrowPeak peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF236YIV 13311217 ENCODE Processing Pipeline 5062aeae582c6e2c5134d0df167c58fe https://www.encodeproject.org/files/ENCFF666YKX/@@download/ENCFF666YKX.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF918ZBN bed narrowPeak conservative idr thresholded peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF236YIV, ENCFF392FYA, ENCFF640NJO 177895 ENCODE Processing Pipeline b93c6dfcd334037dcd3542027a6978b8 https://www.encodeproject.org/files/ENCFF918ZBN/@@download/ENCFF918ZBN.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF985HJX bigBed narrowPeak conservative idr thresholded peaks ENCSR407BEZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZHX2-human ENCAB000ATW DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF918ZBN 370953 ENCODE Processing Pipeline a59dfef16264071ac1bb22290b3e9489 https://www.encodeproject.org/files/ENCFF985HJX/@@download/ENCFF985HJX.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF000QYS bam alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QZG 1507897199 Richard Myers, HAIB ac4cb6a5a5850f06a7f6bddee790bb3f https://www.encodeproject.org/files/ENCFF000QYS/@@download/ENCFF000QYS.bam hg19 archived control low read depth biological replicates with identical biosample ENCFF000QYT bam alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000QZK 2769883290 Richard Myers, HAIB 7a75c89b05f1918298388e59a4a4909f https://www.encodeproject.org/files/ENCFF000QYT/@@download/ENCFF000QYT.bam hg19 archived control low read depth biological replicates with identical biosample ENCFF000QYU bigBed broadPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UPJ 607523 Richard Myers, HAIB 5c24ef24ef50d11153899525241455ad https://www.encodeproject.org/files/ENCFF000QYU/@@download/ENCFF000QYU.bigBed hg19 archived control low read depth biological replicates with identical biosample ENCFF000QYV bigBed broadPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UPK 426947 Richard Myers, HAIB c4139e2359bb1efdbcfdb0fdbab31723 https://www.encodeproject.org/files/ENCFF000QYV/@@download/ENCFF000QYV.bigBed hg19 archived control low read depth biological replicates with identical biosample ENCFF000QYX bigWig raw signal ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 252992116 Richard Myers, HAIB 7f6455fc88944c88c1aec366af632673 https://www.encodeproject.org/files/ENCFF000QYX/@@download/ENCFF000QYX.bigWig hg19 archived control low read depth missing derived_from, biological replicates with identical biosample ENCFF000QYY bigWig raw signal ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 319301766 Richard Myers, HAIB feb7aaf0e8667fc6842fdaf4009f9b19 https://www.encodeproject.org/files/ENCFF000QYY/@@download/ENCFF000QYY.bigWig hg19 archived control low read depth missing derived_from, biological replicates with identical biosample ENCFF000QZG fastq reads ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1545885817 Richard Myers, HAIB ce8688c323545327142ac64730d1c004 https://www.encodeproject.org/files/ENCFF000QZG/@@download/ENCFF000QZG.fastq.gz HiSeq 2000 /files/ENCFF000RCK/ released control low read depth biological replicates with identical biosample ENCFF000QZK fastq reads ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 2795551152 Richard Myers, HAIB 02965087273798e452d550a5dbb97bd0 https://www.encodeproject.org/files/ENCFF000QZK/@@download/ENCFF000QZK.fastq.gz HiSeq 2000 /files/ENCFF000RCM/ released control low read depth biological replicates with identical biosample ENCFF001UPJ bed broadPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 393093 Richard Myers, HAIB 59d7dcce4f21ed0df47323a697157052 https://www.encodeproject.org/files/ENCFF001UPJ/@@download/ENCFF001UPJ.bed.gz hg19 archived control low read depth missing derived_from, biological replicates with identical biosample ENCFF001UPK bed broadPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 240659 Richard Myers, HAIB 0662e4ff28887f970cb8aafe3c1f012c https://www.encodeproject.org/files/ENCFF001UPK/@@download/ENCFF001UPK.bed.gz hg19 archived control low read depth missing derived_from, biological replicates with identical biosample ENCFF328FRQ bam unfiltered alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QZK, ENCFF807MUK 2972596342 ENCODE Processing Pipeline ca20a6fee5dc0c5b337ccf20530db82d https://www.encodeproject.org/files/ENCFF328FRQ/@@download/ENCFF328FRQ.bam hg19 released control low read depth biological replicates with identical biosample ENCFF129GZZ bam unfiltered alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QZG, ENCFF643CGH 1619883532 ENCODE Processing Pipeline b1a4032f2da8eb5828cbbcb8f491b584 https://www.encodeproject.org/files/ENCFF129GZZ/@@download/ENCFF129GZZ.bam GRCh38 released control low read depth biological replicates with identical biosample ENCFF880NAC bam unfiltered alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QZK, ENCFF643CGH 2983006675 ENCODE Processing Pipeline 9f93f43f26c9a3d209e7dbe8ed21a819 https://www.encodeproject.org/files/ENCFF880NAC/@@download/ENCFF880NAC.bam GRCh38 released control low read depth biological replicates with identical biosample ENCFF507TFC bam alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QZG, ENCFF643CGH 1264468403 ENCODE Processing Pipeline d1b881453df5e2c425df258571952462 https://www.encodeproject.org/files/ENCFF507TFC/@@download/ENCFF507TFC.bam GRCh38 released control low read depth biological replicates with identical biosample ENCFF839BYC bam alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QZG, ENCFF807MUK 1264818201 ENCODE Processing Pipeline 2ce3a3cde18098d348f808b99ab0bdd8 https://www.encodeproject.org/files/ENCFF839BYC/@@download/ENCFF839BYC.bam hg19 released control low read depth biological replicates with identical biosample ENCFF043VBN bam unfiltered alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QZG, ENCFF807MUK 1616161664 ENCODE Processing Pipeline 5c7d6c4588b3129dc6c907cc6af9e90b https://www.encodeproject.org/files/ENCFF043VBN/@@download/ENCFF043VBN.bam hg19 released control low read depth biological replicates with identical biosample ENCFF697VPH bam alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QZK, ENCFF643CGH 2221003407 ENCODE Processing Pipeline 1c76822edae5df8fee50278a33dfa586 https://www.encodeproject.org/files/ENCFF697VPH/@@download/ENCFF697VPH.bam GRCh38 released control low read depth biological replicates with identical biosample ENCFF189JRN bam alignments ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QZK, ENCFF807MUK 2221141812 ENCODE Processing Pipeline b239d5b0bed5c520331056f0d86a26ef https://www.encodeproject.org/files/ENCFF189JRN/@@download/ENCFF189JRN.bam hg19 released control low read depth biological replicates with identical biosample ENCFF694UHP bigWig signal p-value ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF078LPR, ENCFF436ZGI, ENCFF839BYC 661582537 ENCODE Processing Pipeline 8854a7f197d76cff911e139f555c8559 https://www.encodeproject.org/files/ENCFF694UHP/@@download/ENCFF694UHP.bigWig hg19 released control low read depth biological replicates with identical biosample ENCFF632OZB bigWig signal p-value ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF078LPR, ENCFF189JRN, ENCFF436ZGI 828715801 ENCODE Processing Pipeline 76243b6359b70e4b4e156bae18694d7a https://www.encodeproject.org/files/ENCFF632OZB/@@download/ENCFF632OZB.bigWig hg19 released control low read depth biological replicates with identical biosample ENCFF276HDG bigWig signal p-value ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF078LPR, ENCFF189JRN, ENCFF436ZGI, ENCFF839BYC 913704962 ENCODE Processing Pipeline 5635131c4fd00cf1b2b4e5ea86da33c6 https://www.encodeproject.org/files/ENCFF276HDG/@@download/ENCFF276HDG.bigWig hg19 released control low read depth biological replicates with identical biosample ENCFF611VUO bigWig fold change over control ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF078LPR, ENCFF436ZGI, ENCFF839BYC 616216535 ENCODE Processing Pipeline 9d9a4c6245a30a078aa81c570b83c30f https://www.encodeproject.org/files/ENCFF611VUO/@@download/ENCFF611VUO.bigWig hg19 released control low read depth biological replicates with identical biosample ENCFF215WJC bigWig fold change over control ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF078LPR, ENCFF189JRN, ENCFF436ZGI 820253098 ENCODE Processing Pipeline 14a5b54704beb3b4139e18f49606a21c https://www.encodeproject.org/files/ENCFF215WJC/@@download/ENCFF215WJC.bigWig hg19 released control low read depth biological replicates with identical biosample ENCFF307ORU bigWig fold change over control ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF078LPR, ENCFF189JRN, ENCFF436ZGI, ENCFF839BYC 1121182481 ENCODE Processing Pipeline a1fe7756f5009cd7e0c5a3601cc6d002 https://www.encodeproject.org/files/ENCFF307ORU/@@download/ENCFF307ORU.bigWig hg19 released control low read depth biological replicates with identical biosample ENCFF514HVB bed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF078LPR, ENCFF436ZGI, ENCFF839BYC 5706459 ENCODE Processing Pipeline c5c1523860d58e101f935ddd201f7736 https://www.encodeproject.org/files/ENCFF514HVB/@@download/ENCFF514HVB.bed.gz hg19 released control low read depth biological replicates with identical biosample ENCFF866YBG bed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF078LPR, ENCFF189JRN, ENCFF436ZGI 5679032 ENCODE Processing Pipeline d9c074312b0a7c04ed8fac5b05a55355 https://www.encodeproject.org/files/ENCFF866YBG/@@download/ENCFF866YBG.bed.gz hg19 released control low read depth biological replicates with identical biosample ENCFF101JCE bed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF078LPR, ENCFF189JRN, ENCFF436ZGI, ENCFF839BYC 6480636 ENCODE Processing Pipeline 46d07f0bb54478eb014c4849491ad91b https://www.encodeproject.org/files/ENCFF101JCE/@@download/ENCFF101JCE.bed.gz hg19 released control low read depth biological replicates with identical biosample ENCFF040FMV bigBed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF514HVB 11209542 ENCODE Processing Pipeline 0223a81a5092fbafb05ac22ac8c81e4e https://www.encodeproject.org/files/ENCFF040FMV/@@download/ENCFF040FMV.bigBed hg19 released control low read depth biological replicates with identical biosample ENCFF017VIF bigBed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF866YBG 11328849 ENCODE Processing Pipeline 49eb85d8126ddc017797c59a25bd0d69 https://www.encodeproject.org/files/ENCFF017VIF/@@download/ENCFF017VIF.bigBed hg19 released control low read depth biological replicates with identical biosample ENCFF911YCG bigBed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF101JCE 13702519 ENCODE Processing Pipeline b02721ece340ec7aa02dd49ef4e47e40 https://www.encodeproject.org/files/ENCFF911YCG/@@download/ENCFF911YCG.bigBed hg19 released control low read depth biological replicates with identical biosample ENCFF598ZLV bed narrowPeak optimal idr thresholded peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF101JCE, ENCFF514HVB, ENCFF866YBG 676842 ENCODE Processing Pipeline 3f6042bd4ab7bb38270b70206d900dd3 https://www.encodeproject.org/files/ENCFF598ZLV/@@download/ENCFF598ZLV.bed.gz hg19 released control low read depth biological replicates with identical biosample ENCFF911WUS bed narrowPeak conservative idr thresholded peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF101JCE, ENCFF514HVB, ENCFF866YBG 621236 ENCODE Processing Pipeline 9e76f36d81674656dc7b83411482085d https://www.encodeproject.org/files/ENCFF911WUS/@@download/ENCFF911WUS.bed.gz hg19 released control low read depth biological replicates with identical biosample ENCFF030BUN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF598ZLV 1320563 ENCODE Processing Pipeline 7d9f9fe4c0820c2ae701a7b0cbb8063e https://www.encodeproject.org/files/ENCFF030BUN/@@download/ENCFF030BUN.bigBed hg19 released control low read depth biological replicates with identical biosample ENCFF268LGW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF911WUS 1233777 ENCODE Processing Pipeline f543a0a2739534396eb81c330fcee49f https://www.encodeproject.org/files/ENCFF268LGW/@@download/ENCFF268LGW.bigBed hg19 released control low read depth biological replicates with identical biosample ENCFF118FAD bigWig signal p-value ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF697VPH 729319499 ENCODE Processing Pipeline dfef246ad4955a3e25b671c090443f7d https://www.encodeproject.org/files/ENCFF118FAD/@@download/ENCFF118FAD.bigWig GRCh38 released control low read depth biological replicates with identical biosample ENCFF314FHH bed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF697VPH 5676301 ENCODE Processing Pipeline 59d184e970b2b6beee5facc8c65d522d https://www.encodeproject.org/files/ENCFF314FHH/@@download/ENCFF314FHH.bed.gz GRCh38 released control low read depth biological replicates with identical biosample ENCFF775ZJV bigBed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF314FHH 11334673 ENCODE Processing Pipeline 489545c75e5dee11a38f62853c8921ea https://www.encodeproject.org/files/ENCFF775ZJV/@@download/ENCFF775ZJV.bigBed GRCh38 released control low read depth biological replicates with identical biosample ENCFF720DEN bigWig signal p-value ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF507TFC 621339123 ENCODE Processing Pipeline 9a0fa0fe6a564f4e527534509a220aad https://www.encodeproject.org/files/ENCFF720DEN/@@download/ENCFF720DEN.bigWig GRCh38 released control low read depth biological replicates with identical biosample ENCFF246HKM bed narrowPeak optimal idr thresholded peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF314FHH, ENCFF419RSJ, ENCFF682AGQ, ENCFF773HQL 679307 ENCODE Processing Pipeline d09e015723a8dd85105043ce700ac8fe https://www.encodeproject.org/files/ENCFF246HKM/@@download/ENCFF246HKM.bed.gz GRCh38 released control low read depth biological replicates with identical biosample ENCFF089OSZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF246HKM 1325901 ENCODE Processing Pipeline 793ec14706c41727637f5601bcb9206d https://www.encodeproject.org/files/ENCFF089OSZ/@@download/ENCFF089OSZ.bigBed GRCh38 released control low read depth biological replicates with identical biosample ENCFF773HQL bed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF507TFC 5707686 ENCODE Processing Pipeline 2a3a2019eede7c53e66c4238c481d5d1 https://www.encodeproject.org/files/ENCFF773HQL/@@download/ENCFF773HQL.bed.gz GRCh38 released control low read depth biological replicates with identical biosample ENCFF696GTA bigWig fold change over control ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF507TFC 608322002 ENCODE Processing Pipeline 9c250329da895fcff35277604a29e3b1 https://www.encodeproject.org/files/ENCFF696GTA/@@download/ENCFF696GTA.bigWig GRCh38 released control low read depth biological replicates with identical biosample ENCFF211DPV bigWig fold change over control ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF697VPH 820807405 ENCODE Processing Pipeline 59640e185607215d55379eaa99c74b23 https://www.encodeproject.org/files/ENCFF211DPV/@@download/ENCFF211DPV.bigWig GRCh38 released control low read depth biological replicates with identical biosample ENCFF682AGQ bed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF507TFC, ENCFF697VPH 6478149 ENCODE Processing Pipeline 45bbcdac723ee9e98678c872fec3716a https://www.encodeproject.org/files/ENCFF682AGQ/@@download/ENCFF682AGQ.bed.gz GRCh38 released control low read depth biological replicates with identical biosample ENCFF120UGE bigWig signal p-value ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF507TFC, ENCFF697VPH 914311069 ENCODE Processing Pipeline ac8380d563d4409c63954b3a869deffb https://www.encodeproject.org/files/ENCFF120UGE/@@download/ENCFF120UGE.bigWig GRCh38 released control low read depth biological replicates with identical biosample ENCFF008ACO bigWig fold change over control ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF507TFC, ENCFF697VPH 1121844115 ENCODE Processing Pipeline 31003e0a9896505619844bf35f97c10f https://www.encodeproject.org/files/ENCFF008ACO/@@download/ENCFF008ACO.bigWig GRCh38 released control low read depth biological replicates with identical biosample ENCFF533YSW bigBed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF773HQL 11215652 ENCODE Processing Pipeline d5387bc125f504e562d68a9b37e5b0dd https://www.encodeproject.org/files/ENCFF533YSW/@@download/ENCFF533YSW.bigBed GRCh38 released control low read depth biological replicates with identical biosample ENCFF030PVU bigBed narrowPeak peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF682AGQ 13707578 ENCODE Processing Pipeline ed6e3e6ba06ee88d674ee3e692f2ec19 https://www.encodeproject.org/files/ENCFF030PVU/@@download/ENCFF030PVU.bigBed GRCh38 released control low read depth biological replicates with identical biosample ENCFF627FTK bed narrowPeak conservative idr thresholded peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF314FHH, ENCFF419RSJ, ENCFF682AGQ, ENCFF773HQL 622111 ENCODE Processing Pipeline 0862a4b8eafbb88554c62561ea550ecf https://www.encodeproject.org/files/ENCFF627FTK/@@download/ENCFF627FTK.bed.gz GRCh38 released control low read depth biological replicates with identical biosample ENCFF022MEO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BSK ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF627FTK 1236623 ENCODE Processing Pipeline 5f2e339747ae2ab9a4c8530cc981aa36 https://www.encodeproject.org/files/ENCFF022MEO/@@download/ENCFF022MEO.bigBed GRCh38 released control low read depth biological replicates with identical biosample ENCFF002BFK fastq reads ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1719435050 Richard Myers, HAIB 39669c8b22b70ecac3b31f27416003cd SRA:SRR5339028 https://www.encodeproject.org/files/ENCFF002BFK/@@download/ENCFF002BFK.fastq.gz HiSeq 2000 /files/ENCFF002BGA/ released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF002BFL fastq reads ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1718537202 Richard Myers, HAIB c14272a4448e742611e2f99c32a735f2 SRA:SRR5339029 https://www.encodeproject.org/files/ENCFF002BFL/@@download/ENCFF002BFL.fastq.gz HiSeq 2000 /files/ENCFF002BFW/ released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF209SJM bam alignments ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFK, ENCFF807MUK 1317947874 ENCODE Processing Pipeline 810097b2a3d3f3fb148e106e5eade5e9 https://www.encodeproject.org/files/ENCFF209SJM/@@download/ENCFF209SJM.bam hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF901ETI bam alignments ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFL, ENCFF807MUK 1296681228 ENCODE Processing Pipeline 35ba72acf22f34470001a2bdf0d546f5 https://www.encodeproject.org/files/ENCFF901ETI/@@download/ENCFF901ETI.bam hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF762OJJ bigWig signal p-value ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF209SJM, ENCFF223KCT, ENCFF859ZYD, ENCFF901ETI 1124519793 ENCODE Processing Pipeline 24d3daac5df34fc607c697f4a8a81f8e https://www.encodeproject.org/files/ENCFF762OJJ/@@download/ENCFF762OJJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF496IEH bed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF209SJM, ENCFF223KCT, ENCFF859ZYD, ENCFF901ETI 6928369 ENCODE Processing Pipeline dbb91b95a00245ee35d1d669c7495045 https://www.encodeproject.org/files/ENCFF496IEH/@@download/ENCFF496IEH.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF761BJR bigBed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF162BDU 11332032 ENCODE Processing Pipeline 614e9e14e30c5ca4fdfc0182f22da12c https://www.encodeproject.org/files/ENCFF761BJR/@@download/ENCFF761BJR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF894KAJ bigWig fold change over control ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF209SJM, ENCFF223KCT 518558390 ENCODE Processing Pipeline 580839bc59ca7476ff2c9b2361120e82 https://www.encodeproject.org/files/ENCFF894KAJ/@@download/ENCFF894KAJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF162BDU bed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF209SJM, ENCFF223KCT 5588455 ENCODE Processing Pipeline 1f3567c960dc1a40d7c5fc384fd7a346 https://www.encodeproject.org/files/ENCFF162BDU/@@download/ENCFF162BDU.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF319PMQ bigWig signal p-value ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF209SJM, ENCFF223KCT 551365596 ENCODE Processing Pipeline a854de810f61820fdc338e5e153d0b19 https://www.encodeproject.org/files/ENCFF319PMQ/@@download/ENCFF319PMQ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF400ILK bigWig signal p-value ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF859ZYD, ENCFF901ETI 548123499 ENCODE Processing Pipeline 3cea2558a306b457525809e8785b99da https://www.encodeproject.org/files/ENCFF400ILK/@@download/ENCFF400ILK.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF486PYA bigWig fold change over control ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF209SJM, ENCFF223KCT, ENCFF859ZYD, ENCFF901ETI 1117677730 ENCODE Processing Pipeline ccb59b051be0daa48aaa3a5a06f33c83 https://www.encodeproject.org/files/ENCFF486PYA/@@download/ENCFF486PYA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF777XYO bed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF859ZYD, ENCFF901ETI 6114774 ENCODE Processing Pipeline 591a63e89b91ba7784a1f2dd8d5bdeca https://www.encodeproject.org/files/ENCFF777XYO/@@download/ENCFF777XYO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF434RBQ bigBed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF777XYO 13374473 ENCODE Processing Pipeline 59be9eb7ab19be7c23d79d787420bd96 https://www.encodeproject.org/files/ENCFF434RBQ/@@download/ENCFF434RBQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF225HQM bigBed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF496IEH 13471338 ENCODE Processing Pipeline d0c563870f4727d71cbbb07a584ad980 https://www.encodeproject.org/files/ENCFF225HQM/@@download/ENCFF225HQM.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF881CKS bigWig fold change over control ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF859ZYD, ENCFF901ETI 554529088 ENCODE Processing Pipeline bbb04e5dbeea0676e6c160cc62fa7282 https://www.encodeproject.org/files/ENCFF881CKS/@@download/ENCFF881CKS.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF764IXV bam unfiltered alignments ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFL, ENCFF643CGH 1814203199 ENCODE Processing Pipeline d36503247090f781272786e660912649 https://www.encodeproject.org/files/ENCFF764IXV/@@download/ENCFF764IXV.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF496BNB bam unfiltered alignments ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFK, ENCFF643CGH 1821027299 ENCODE Processing Pipeline 9f53b239ac30df56fad4dfd6e04d19b7 https://www.encodeproject.org/files/ENCFF496BNB/@@download/ENCFF496BNB.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF472MGT bam alignments ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFL, ENCFF643CGH 1304221358 ENCODE Processing Pipeline 1a57275751cb5a7d4dac63ae6dffab03 https://www.encodeproject.org/files/ENCFF472MGT/@@download/ENCFF472MGT.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF383ODW bam alignments ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFK, ENCFF643CGH 1325427381 ENCODE Processing Pipeline 546db6ced2a21c9bdb1ad352c973b5bc https://www.encodeproject.org/files/ENCFF383ODW/@@download/ENCFF383ODW.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF499PMB bigWig signal p-value ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF154WIU, ENCFF472MGT 593614813 ENCODE Processing Pipeline 7233236e658bca6693c5f6924539bc9e https://www.encodeproject.org/files/ENCFF499PMB/@@download/ENCFF499PMB.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF193MGP bigWig signal p-value ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF383ODW, ENCFF747NOF 682213889 ENCODE Processing Pipeline cae254c8ce01fde75db50bf77baf03e6 https://www.encodeproject.org/files/ENCFF193MGP/@@download/ENCFF193MGP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF461SOE bigWig signal p-value ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF154WIU, ENCFF383ODW, ENCFF472MGT, ENCFF747NOF 1130320012 ENCODE Processing Pipeline 5d128ec8c8a547d16321592248a75a74 https://www.encodeproject.org/files/ENCFF461SOE/@@download/ENCFF461SOE.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF662NZE bigWig fold change over control ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF383ODW, ENCFF747NOF 509114173 ENCODE Processing Pipeline 368f6c9654bf425c150522509826f6bf https://www.encodeproject.org/files/ENCFF662NZE/@@download/ENCFF662NZE.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF394JES bigWig fold change over control ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF154WIU, ENCFF472MGT 545472230 ENCODE Processing Pipeline 6f352a3bd0456248ec9618da83c45afa https://www.encodeproject.org/files/ENCFF394JES/@@download/ENCFF394JES.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF304SIN bigWig fold change over control ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF154WIU, ENCFF383ODW, ENCFF472MGT, ENCFF747NOF 1118934828 ENCODE Processing Pipeline a831312a3ba3ceef2c962f43a25d4273 https://www.encodeproject.org/files/ENCFF304SIN/@@download/ENCFF304SIN.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF142JGU bed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF154WIU, ENCFF383ODW, ENCFF472MGT, ENCFF747NOF 6807601 ENCODE Processing Pipeline f8a8e242dabf5384a6717fcb92b9dd69 https://www.encodeproject.org/files/ENCFF142JGU/@@download/ENCFF142JGU.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF012WTF bigBed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF142JGU 13472859 ENCODE Processing Pipeline 410d4f87ef0f74a1e58b1426c6ec4c50 https://www.encodeproject.org/files/ENCFF012WTF/@@download/ENCFF012WTF.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF461IYM bigBed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF673FMT 13349663 ENCODE Processing Pipeline aeac0d7526079e07f28ac31d5a7a9404 https://www.encodeproject.org/files/ENCFF461IYM/@@download/ENCFF461IYM.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF916QGP bed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF383ODW, ENCFF747NOF 5411850 ENCODE Processing Pipeline bac99f3216ff62694517e4ddd8c6af68 https://www.encodeproject.org/files/ENCFF916QGP/@@download/ENCFF916QGP.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF018BOV bigBed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF916QGP 11277630 ENCODE Processing Pipeline 5ece84628e2065d43afd1c0fb5eda69c https://www.encodeproject.org/files/ENCFF018BOV/@@download/ENCFF018BOV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF269LTR bed narrowPeak conservative idr thresholded peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF142JGU, ENCFF419RSJ, ENCFF673FMT, ENCFF916QGP 256651 ENCODE Processing Pipeline b49388341fbf59b8e2853648316facad https://www.encodeproject.org/files/ENCFF269LTR/@@download/ENCFF269LTR.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF673FMT bed narrowPeak peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF154WIU, ENCFF472MGT 5948761 ENCODE Processing Pipeline 9f096c41507cae83734ddc21e62ea0db https://www.encodeproject.org/files/ENCFF673FMT/@@download/ENCFF673FMT.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF592LKK bigBed narrowPeak conservative idr thresholded peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF269LTR 595704 ENCODE Processing Pipeline a16589d60a379b8316cf75d6b2d6ca09 https://www.encodeproject.org/files/ENCFF592LKK/@@download/ENCFF592LKK.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF745ANU bed narrowPeak optimal idr thresholded peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF142JGU, ENCFF419RSJ, ENCFF673FMT, ENCFF916QGP 382019 ENCODE Processing Pipeline cff6f88f836c9a4566acf3a4bc39d9a0 https://www.encodeproject.org/files/ENCFF745ANU/@@download/ENCFF745ANU.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF482BSZ bigBed narrowPeak optimal idr thresholded peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF745ANU 797564 ENCODE Processing Pipeline 461623e0c7c3e9edced0ce13791a9d62 https://www.encodeproject.org/files/ENCFF482BSZ/@@download/ENCFF482BSZ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF891RJI bigBed narrowPeak conservative idr thresholded peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF972SOG 451269 ENCODE Processing Pipeline 9b130066ec3c18c72ae181b010d4e7ff https://www.encodeproject.org/files/ENCFF891RJI/@@download/ENCFF891RJI.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF972SOG bed narrowPeak conservative idr thresholded peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF162BDU, ENCFF496IEH, ENCFF777XYO 229670 ENCODE Processing Pipeline 8e8a22cc5e08a12827fd8705e6db2cf8 https://www.encodeproject.org/files/ENCFF972SOG/@@download/ENCFF972SOG.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF746DYZ bigBed narrowPeak optimal idr thresholded peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF692GBM 589795 ENCODE Processing Pipeline 357d09e64f008ccf0f840245013fbc86 https://www.encodeproject.org/files/ENCFF746DYZ/@@download/ENCFF746DYZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF692GBM bed narrowPeak optimal idr thresholded peaks ENCSR626VUC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF162BDU, ENCFF496IEH, ENCFF777XYO 337339 ENCODE Processing Pipeline 1acc555b446c6ccf848d0b6257a65ad6 https://www.encodeproject.org/files/ENCFF692GBM/@@download/ENCFF692GBM.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing unfiltered alignments ENCFF000OOQ bam alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OPC 1001893091 Richard Myers, HAIB 1990c8409bee3c93a1c0f6ca728c2e65 https://www.encodeproject.org/files/ENCFF000OOQ/@@download/ENCFF000OOQ.bam hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOR bigBed broadPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBI 459419 Richard Myers, HAIB 5065b8d18a13c71744b98fed9b3a4d61 https://www.encodeproject.org/files/ENCFF000OOR/@@download/ENCFF000OOR.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOS bigBed broadPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBJ 166727 Richard Myers, HAIB 43fd5ed101d4c2288accf978e12c3c27 https://www.encodeproject.org/files/ENCFF000OOS/@@download/ENCFF000OOS.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOT bam alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OPF 572894109 Richard Myers, HAIB 5d44df373748a5c3e29178e3168b44c2 https://www.encodeproject.org/files/ENCFF000OOT/@@download/ENCFF000OOT.bam hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOV bigWig raw signal ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 14239752 Richard Myers, HAIB 0501441389402faee68d2a65e9d328d0 https://www.encodeproject.org/files/ENCFF000OOV/@@download/ENCFF000OOV.bigWig hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OOW bigWig raw signal ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 4859158 Richard Myers, HAIB 6877c5d28d98709e2a54b57f0d33faed https://www.encodeproject.org/files/ENCFF000OOW/@@download/ENCFF000OOW.bigWig hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OPC fastq reads ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 863174329 Richard Myers, HAIB 018dbc3e83a2c0355c00ad0e03575dcd https://www.encodeproject.org/files/ENCFF000OPC/@@download/ENCFF000OPC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OPF fastq reads ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 616471970 Richard Myers, HAIB f18511037604ec7c8785072f5686baf9 https://www.encodeproject.org/files/ENCFF000OPF/@@download/ENCFF000OPF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UBI bed broadPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 260473 Richard Myers, HAIB 4b6f9d0096d0e2e6aa65bb73307f0a77 https://www.encodeproject.org/files/ENCFF001UBI/@@download/ENCFF001UBI.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UBJ bed broadPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 78391 Richard Myers, HAIB b778bd60e6b8f5a24975f4af2fd8c007 https://www.encodeproject.org/files/ENCFF001UBJ/@@download/ENCFF001UBJ.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CIX bed narrowPeak optimal idr thresholded peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 113527 ENCODE Consortium Analysis Working Group 9b30d396b2ae6ddbbc58f47f039335b7 https://www.encodeproject.org/files/ENCFF002CIX/@@download/ENCFF002CIX.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF039KDK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE ENCFF002CIX 277522 ENCODE Consortium 1aff68adef299a852cf20b3e993f6aef https://www.encodeproject.org/files/ENCFF039KDK/@@download/ENCFF039KDK.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF676XEO bam unfiltered alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPF, ENCFF643CGH 777008451 ENCODE Processing Pipeline a6b0e1f7d5f6607c7bcf8df096600a18 https://www.encodeproject.org/files/ENCFF676XEO/@@download/ENCFF676XEO.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF325UFA bam alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPF, ENCFF643CGH 356890283 ENCODE Processing Pipeline 765895942430724feff22f23849e51cd https://www.encodeproject.org/files/ENCFF325UFA/@@download/ENCFF325UFA.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF517RFE bam unfiltered alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPC, ENCFF643CGH 1236121945 ENCODE Processing Pipeline 351f673934960c887ee5f7e608610116 https://www.encodeproject.org/files/ENCFF517RFE/@@download/ENCFF517RFE.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF932SAB bam alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPC, ENCFF643CGH 834961698 ENCODE Processing Pipeline 1538b5be1a5b2135a97704cd70302075 https://www.encodeproject.org/files/ENCFF932SAB/@@download/ENCFF932SAB.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF090DDS bam unfiltered alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPF, ENCFF807MUK 775513917 ENCODE Processing Pipeline 46c6cb5c23925c46c9cbb5526c50d741 https://www.encodeproject.org/files/ENCFF090DDS/@@download/ENCFF090DDS.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF141XQF bam alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPF, ENCFF807MUK 357156878 ENCODE Processing Pipeline 8a3bbf81135b3be43210cabbbe52a2c5 https://www.encodeproject.org/files/ENCFF141XQF/@@download/ENCFF141XQF.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF133HNA bam alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPC, ENCFF807MUK 835317640 ENCODE Processing Pipeline d01fc2b5b1a318d7512f1945015a03b4 https://www.encodeproject.org/files/ENCFF133HNA/@@download/ENCFF133HNA.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF468VIP bam unfiltered alignments ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPC, ENCFF807MUK 1231731477 ENCODE Processing Pipeline e6809a8a47da01f2424e363dc7710392 https://www.encodeproject.org/files/ENCFF468VIP/@@download/ENCFF468VIP.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF497XQQ bigWig signal p-value ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF932SAB, ENCFF948LKH 524163006 ENCODE Processing Pipeline e954615fa88bd3a84fc9092844d6c298 https://www.encodeproject.org/files/ENCFF497XQQ/@@download/ENCFF497XQQ.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF641WZV bigWig signal p-value ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF325UFA, ENCFF948LKH 373314263 ENCODE Processing Pipeline 37d3cef55fb4db0c8ddc6d8f624990d1 https://www.encodeproject.org/files/ENCFF641WZV/@@download/ENCFF641WZV.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF202PVG bigWig signal p-value ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF325UFA, ENCFF932SAB, ENCFF948LKH 527259129 ENCODE Processing Pipeline fcbbca1531d6391a60c872eb73684461 https://www.encodeproject.org/files/ENCFF202PVG/@@download/ENCFF202PVG.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF542BRR bigWig fold change over control ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF932SAB, ENCFF948LKH 462832843 ENCODE Processing Pipeline 9c22414264320b2bf7db2ef0c6e2edcb https://www.encodeproject.org/files/ENCFF542BRR/@@download/ENCFF542BRR.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF931OAX bigWig fold change over control ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF325UFA, ENCFF948LKH 232819346 ENCODE Processing Pipeline 70fcb6f8955f000f7cd1e709dc90241a https://www.encodeproject.org/files/ENCFF931OAX/@@download/ENCFF931OAX.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF430ARK bed narrowPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF325UFA, ENCFF932SAB, ENCFF948LKH 6060432 ENCODE Processing Pipeline 906206bc26222f0b9918d0163235c81c https://www.encodeproject.org/files/ENCFF430ARK/@@download/ENCFF430ARK.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF391OZF bigBed narrowPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF615FBI 12728909 ENCODE Processing Pipeline 3fa2c8c7ed80451728f26ac792ee657d https://www.encodeproject.org/files/ENCFF391OZF/@@download/ENCFF391OZF.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF401DOJ bigWig fold change over control ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF325UFA, ENCFF932SAB, ENCFF948LKH 577752723 ENCODE Processing Pipeline 518a04b8d958b3e4e31bb070d972e5b5 https://www.encodeproject.org/files/ENCFF401DOJ/@@download/ENCFF401DOJ.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF500YWM bigBed narrowPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF430ARK 13246924 ENCODE Processing Pipeline 7ef10736f51681ab907a4b35d4861341 https://www.encodeproject.org/files/ENCFF500YWM/@@download/ENCFF500YWM.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF615FBI bed narrowPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF325UFA, ENCFF948LKH 4900188 ENCODE Processing Pipeline bf4644ec277238715636eba755f578f1 https://www.encodeproject.org/files/ENCFF615FBI/@@download/ENCFF615FBI.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF225GFQ bed narrowPeak optimal idr thresholded peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF430ARK, ENCFF615FBI, ENCFF681LZY 162870 ENCODE Processing Pipeline 1b76a66a073593c6aa559fcbadc5560c https://www.encodeproject.org/files/ENCFF225GFQ/@@download/ENCFF225GFQ.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF681LZY bed narrowPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF932SAB, ENCFF948LKH 5436660 ENCODE Processing Pipeline 743c98ef4aec51a64d5eab36d300fe4f https://www.encodeproject.org/files/ENCFF681LZY/@@download/ENCFF681LZY.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF272LNE bigBed narrowPeak peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF681LZY 13121229 ENCODE Processing Pipeline 7e36ba3a591ffbba2f0ea27843e6d9e0 https://www.encodeproject.org/files/ENCFF272LNE/@@download/ENCFF272LNE.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF743LHV bed narrowPeak conservative idr thresholded peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF430ARK, ENCFF615FBI, ENCFF681LZY 92313 ENCODE Processing Pipeline 857120ce2a45d566c6c711b461b8a9cf https://www.encodeproject.org/files/ENCFF743LHV/@@download/ENCFF743LHV.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF271RSO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225GFQ 346304 ENCODE Processing Pipeline 7004b2cf53aa5299f001415a98f4b1d1 https://www.encodeproject.org/files/ENCFF271RSO/@@download/ENCFF271RSO.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF625NTM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF743LHV 240099 ENCODE Processing Pipeline 51fd27ddbef1b072aad42054ff3e6fbd https://www.encodeproject.org/files/ENCFF625NTM/@@download/ENCFF625NTM.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NHR bam alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NID 1230861518 Richard Myers, HAIB fd2c56dc5794c47c0ea08d2ce4ab4a62 https://www.encodeproject.org/files/ENCFF000NHR/@@download/ENCFF000NHR.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHS bam alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NIG 1299559271 Richard Myers, HAIB a42ffd4aa1bc91c55c5a5c0688d3a08d https://www.encodeproject.org/files/ENCFF000NHS/@@download/ENCFF000NHS.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHT bigBed broadPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TTT 345983 Richard Myers, HAIB 58fcfdfe75aecfb13b514b691acc9e02 https://www.encodeproject.org/files/ENCFF000NHT/@@download/ENCFF000NHT.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHU bigBed broadPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TTU 1043351 Richard Myers, HAIB 5be4fdc54bfdbac99e4bc1da53b850a6 https://www.encodeproject.org/files/ENCFF000NHU/@@download/ENCFF000NHU.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHW bigWig raw signal ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 1 8111165 Richard Myers, HAIB af4299485f1334ade67023c0eea7204f https://www.encodeproject.org/files/ENCFF000NHW/@@download/ENCFF000NHW.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NHX bigWig raw signal ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 1 42966016 Richard Myers, HAIB 0e6410a670fbd13be724b04b9881b12d https://www.encodeproject.org/files/ENCFF000NHX/@@download/ENCFF000NHX.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NID fastq reads ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1218127733 Richard Myers, HAIB 3fe33b2312af2ec05f836da848149000 https://www.encodeproject.org/files/ENCFF000NID/@@download/ENCFF000NID.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NIG fastq reads ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1314398922 Richard Myers, HAIB f275a655cdc1b6c36e2a495ae58c31c7 https://www.encodeproject.org/files/ENCFF000NIG/@@download/ENCFF000NIG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TTT bed broadPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 1 178327 Richard Myers, HAIB d8fcc2981c6f103ec015ab27b92dfd91 https://www.encodeproject.org/files/ENCFF001TTT/@@download/ENCFF001TTT.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TTU bed broadPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 1 647694 Richard Myers, HAIB 4cf4e82f60be7500e943caed8379f7ac https://www.encodeproject.org/files/ENCFF001TTU/@@download/ENCFF001TTU.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CGB bed narrowPeak optimal idr thresholded peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 458743 ENCODE Consortium Analysis Working Group ac322aa7e90c92f92ae5c1fb1812dd23 https://www.encodeproject.org/files/ENCFF002CGB/@@download/ENCFF002CGB.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF453AKT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE ENCFF002CGB 1092735 ENCODE Consortium f015399c2eddc88fc401f1023158d997 https://www.encodeproject.org/files/ENCFF453AKT/@@download/ENCFF453AKT.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF823IFJ bam unfiltered alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NID, ENCFF643CGH 1329910423 ENCODE Processing Pipeline 5bb1f6e6d6544902a88bcbf01b9b2a00 https://www.encodeproject.org/files/ENCFF823IFJ/@@download/ENCFF823IFJ.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF264CUG bam alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NID, ENCFF643CGH 830194280 ENCODE Processing Pipeline eb18d368c829ad429d23dff0382013bb https://www.encodeproject.org/files/ENCFF264CUG/@@download/ENCFF264CUG.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF097IFB bam unfiltered alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NIG, ENCFF643CGH 1417111478 ENCODE Processing Pipeline f7c5906fc70face856a8391b6cb02bbc https://www.encodeproject.org/files/ENCFF097IFB/@@download/ENCFF097IFB.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF723RMN bam alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NIG, ENCFF643CGH 852129322 ENCODE Processing Pipeline 404e1adbc724c9ac7944fe4e87875a3e https://www.encodeproject.org/files/ENCFF723RMN/@@download/ENCFF723RMN.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF764CRR bam unfiltered alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NID, ENCFF807MUK 1326402587 ENCODE Processing Pipeline 9a607d55c5c44bfe3940d37dc5b57dcc https://www.encodeproject.org/files/ENCFF764CRR/@@download/ENCFF764CRR.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF681PEE bam alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NID, ENCFF807MUK 830308290 ENCODE Processing Pipeline db3ce9a3c339732366965ba5218f2076 https://www.encodeproject.org/files/ENCFF681PEE/@@download/ENCFF681PEE.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF659DTG bam alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NIG, ENCFF807MUK 852305643 ENCODE Processing Pipeline 17016191ea0b95dc027d971583ddedf6 https://www.encodeproject.org/files/ENCFF659DTG/@@download/ENCFF659DTG.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF025VWP bam unfiltered alignments ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NIG, ENCFF807MUK 1412351387 ENCODE Processing Pipeline 059f6d0b67352a28848d705d6c467176 https://www.encodeproject.org/files/ENCFF025VWP/@@download/ENCFF025VWP.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF231MJL bigWig signal p-value ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF723RMN 567954083 ENCODE Processing Pipeline 931df44c30bf6f0a8bc1e33d8768e0e9 https://www.encodeproject.org/files/ENCFF231MJL/@@download/ENCFF231MJL.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF551VZZ bigWig signal p-value ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF264CUG, ENCFF656HEF 594809917 ENCODE Processing Pipeline 716d12c67d247658fefc34ce07403a5c https://www.encodeproject.org/files/ENCFF551VZZ/@@download/ENCFF551VZZ.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF395KCJ bigWig signal p-value ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF264CUG, ENCFF656HEF, ENCFF723RMN 810909995 ENCODE Processing Pipeline e220348ebcf91605c647e1cb63fcec44 https://www.encodeproject.org/files/ENCFF395KCJ/@@download/ENCFF395KCJ.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF882XMM bigWig fold change over control ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF264CUG, ENCFF656HEF 483223242 ENCODE Processing Pipeline 099785060c8773663693c427d8cc5587 https://www.encodeproject.org/files/ENCFF882XMM/@@download/ENCFF882XMM.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF838VRT bigWig fold change over control ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF723RMN 504565390 ENCODE Processing Pipeline 78b2c20fa6302d3417e78c41f53a93fc https://www.encodeproject.org/files/ENCFF838VRT/@@download/ENCFF838VRT.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF532LIT bed narrowPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF264CUG, ENCFF656HEF 5940677 ENCODE Processing Pipeline 3bbecb511a73a6a035e13b6de042db91 https://www.encodeproject.org/files/ENCFF532LIT/@@download/ENCFF532LIT.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF688NPY bed narrowPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF723RMN 6812341 ENCODE Processing Pipeline 60f25b711053d308438c9e1972fdf11f https://www.encodeproject.org/files/ENCFF688NPY/@@download/ENCFF688NPY.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF042IFX bigWig fold change over control ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF264CUG, ENCFF656HEF, ENCFF723RMN 801480528 ENCODE Processing Pipeline 579a38b5d079d1820a15c0e411405cb0 https://www.encodeproject.org/files/ENCFF042IFX/@@download/ENCFF042IFX.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF877EIF bed narrowPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF264CUG, ENCFF656HEF, ENCFF723RMN 7076734 ENCODE Processing Pipeline f83f07b8057aa1dbc6d224556de01ac3 https://www.encodeproject.org/files/ENCFF877EIF/@@download/ENCFF877EIF.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF936EFC bed narrowPeak conservative idr thresholded peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF532LIT, ENCFF688NPY, ENCFF877EIF 350391 ENCODE Processing Pipeline 0ceaa4cb53b644405e40fa2e9fef86a8 https://www.encodeproject.org/files/ENCFF936EFC/@@download/ENCFF936EFC.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF120JAF bigBed narrowPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF688NPY 12573669 ENCODE Processing Pipeline 83df7a7a2489f53017c8d3b924be1f40 https://www.encodeproject.org/files/ENCFF120JAF/@@download/ENCFF120JAF.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF052DUJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF936EFC 730607 ENCODE Processing Pipeline 31e27db7f01bc153e0b097c01b3c52bf https://www.encodeproject.org/files/ENCFF052DUJ/@@download/ENCFF052DUJ.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF464WQJ bigBed narrowPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF532LIT 13053284 ENCODE Processing Pipeline 9672ba5f1f3518071e036e100878df4b https://www.encodeproject.org/files/ENCFF464WQJ/@@download/ENCFF464WQJ.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF494NYR bigBed narrowPeak peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF877EIF 12701785 ENCODE Processing Pipeline 5eda4f3487520300cce991ade590946e https://www.encodeproject.org/files/ENCFF494NYR/@@download/ENCFF494NYR.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF228CDD bed narrowPeak optimal idr thresholded peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF532LIT, ENCFF688NPY, ENCFF877EIF 554854 ENCODE Processing Pipeline 1194ffcee7a533394c66ad09e99d377f https://www.encodeproject.org/files/ENCFF228CDD/@@download/ENCFF228CDD.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF636UKU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQQ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TCF12-human ENCAB000ALT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF228CDD 1045249 ENCODE Processing Pipeline b2e7a83f5f9029a581aa114c05b8d6f5 https://www.encodeproject.org/files/ENCFF636UKU/@@download/ENCFF636UKU.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NXF bigBed broadPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TXM 627176 Richard Myers, HAIB 6d738d20bca838f9c8995036c6fbbc42 https://www.encodeproject.org/files/ENCFF000NXF/@@download/ENCFF000NXF.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000NXG bigBed broadPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TXN 973497 Richard Myers, HAIB a922477259b61907ab7c966ad624689b https://www.encodeproject.org/files/ENCFF000NXG/@@download/ENCFF000NXG.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000NXH bam alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NXS 1781920093 Richard Myers, HAIB bb7e51815add8c05b57bf70ea024a7e2 https://www.encodeproject.org/files/ENCFF000NXH/@@download/ENCFF000NXH.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000NXI bam alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NXT 1998873501 Richard Myers, HAIB 6ed47cc000eedcece3ae4b17bbfb7518 https://www.encodeproject.org/files/ENCFF000NXI/@@download/ENCFF000NXI.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000NXK bigWig raw signal ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 1 23014647 Richard Myers, HAIB 78df316d2da41ec0780971469e5424ff https://www.encodeproject.org/files/ENCFF000NXK/@@download/ENCFF000NXK.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF000NXL bigWig raw signal ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 1 43546270 Richard Myers, HAIB 6308b3ad00ee633e6402a752b3cb57ab https://www.encodeproject.org/files/ENCFF000NXL/@@download/ENCFF000NXL.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF000NXS fastq reads ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1733233761 Richard Myers, HAIB a5e198a9b58bb3c4ea62124ad6ac53c3 https://www.encodeproject.org/files/ENCFF000NXS/@@download/ENCFF000NXS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000NXT fastq reads ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1934776182 Richard Myers, HAIB b62bc8ce3c68473080429cfc219eecfa https://www.encodeproject.org/files/ENCFF000NXT/@@download/ENCFF000NXT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF001TXM bed broadPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 1 321574 Richard Myers, HAIB dfc0edebdadc973cc4b31a064a019a1a https://www.encodeproject.org/files/ENCFF001TXM/@@download/ENCFF001TXM.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF001TXN bed broadPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 1 637122 Richard Myers, HAIB e9e00b6c695dd6ebf2ae7a85dbe15ca9 https://www.encodeproject.org/files/ENCFF001TXN/@@download/ENCFF001TXN.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF002CHE bed narrowPeak optimal idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 278252 ENCODE Consortium Analysis Working Group 82bd6f9b6af45c6d54c8a54938b9ad60 https://www.encodeproject.org/files/ENCFF002CHE/@@download/ENCFF002CHE.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF493WPQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE ENCFF002CHE 704123 ENCODE Consortium c7800428d24497045f1f5cdeb2ec688a https://www.encodeproject.org/files/ENCFF493WPQ/@@download/ENCFF493WPQ.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF460FPN bam alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NXS, ENCFF643CGH 1323854644 ENCODE Processing Pipeline 7de773e47535fbcfa197a2efea3ac334 https://www.encodeproject.org/files/ENCFF460FPN/@@download/ENCFF460FPN.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF817YQB bam unfiltered alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NXS, ENCFF643CGH 1954456697 ENCODE Processing Pipeline 03c82264e97e65ce113f22522e6f8e4c https://www.encodeproject.org/files/ENCFF817YQB/@@download/ENCFF817YQB.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF310HBV bam unfiltered alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NXT, ENCFF643CGH 2129081320 ENCODE Processing Pipeline 4f3fb3758c52209c830320fa8c0506d6 https://www.encodeproject.org/files/ENCFF310HBV/@@download/ENCFF310HBV.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF682HUS bam alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NXT, ENCFF643CGH 1379189555 ENCODE Processing Pipeline 1cd6c6b083519cdcae9d3732cf37af94 https://www.encodeproject.org/files/ENCFF682HUS/@@download/ENCFF682HUS.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF390XDX bam unfiltered alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NXS, ENCFF807MUK 1951014201 ENCODE Processing Pipeline fc04ddf78d5179efdd8f6ca82750aaac https://www.encodeproject.org/files/ENCFF390XDX/@@download/ENCFF390XDX.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF712MCI bam unfiltered alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NXT, ENCFF807MUK 2128276849 ENCODE Processing Pipeline 6ea395052df98c54d11ecbfe289152d1 https://www.encodeproject.org/files/ENCFF712MCI/@@download/ENCFF712MCI.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF420JTZ bam alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NXS, ENCFF807MUK 1318420704 ENCODE Processing Pipeline a13d550c92ed22718bcc0b1ab646b129 https://www.encodeproject.org/files/ENCFF420JTZ/@@download/ENCFF420JTZ.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF441NFC bam alignments ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NXT, ENCFF807MUK 1371827399 ENCODE Processing Pipeline 67fb6af540890a2d6be971ec29ee38e3 https://www.encodeproject.org/files/ENCFF441NFC/@@download/ENCFF441NFC.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF353HRU bigWig signal p-value ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF460FPN, ENCFF537DAJ 694418513 ENCODE Processing Pipeline 2c25e7ecd7836c655cb8ce12060b8e02 https://www.encodeproject.org/files/ENCFF353HRU/@@download/ENCFF353HRU.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF250UMZ bigWig signal p-value ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF682HUS 613431754 ENCODE Processing Pipeline c155b0fed5f2db5fbcd54f5e443a1e64 https://www.encodeproject.org/files/ENCFF250UMZ/@@download/ENCFF250UMZ.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF006AYB bigWig signal p-value ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF460FPN, ENCFF537DAJ, ENCFF682HUS 811473159 ENCODE Processing Pipeline 319df47b319ec22cd31e09066451c671 https://www.encodeproject.org/files/ENCFF006AYB/@@download/ENCFF006AYB.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF092PKL bigWig fold change over control ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF460FPN, ENCFF537DAJ 618064029 ENCODE Processing Pipeline 815d6df802f898394c7365563fb7a0ca https://www.encodeproject.org/files/ENCFF092PKL/@@download/ENCFF092PKL.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF655JEP bigWig fold change over control ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF460FPN, ENCFF537DAJ, ENCFF682HUS 1037505298 ENCODE Processing Pipeline a4ab6181f01828bb8b6dfb47c5a1c77f https://www.encodeproject.org/files/ENCFF655JEP/@@download/ENCFF655JEP.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF435YJX bigWig fold change over control ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF682HUS 623504829 ENCODE Processing Pipeline 848e46b09ffcb865e49dc7e37209d7cf https://www.encodeproject.org/files/ENCFF435YJX/@@download/ENCFF435YJX.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF439SFD bed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF460FPN, ENCFF537DAJ, ENCFF682HUS 7180783 ENCODE Processing Pipeline 0539b50cd6a50d6fa1dc4589f09b1eaa https://www.encodeproject.org/files/ENCFF439SFD/@@download/ENCFF439SFD.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF240AWE bigBed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF439SFD 12348685 ENCODE Processing Pipeline 561eed83272dc4079e2211afd872fc75 https://www.encodeproject.org/files/ENCFF240AWE/@@download/ENCFF240AWE.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF671GGV bed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF682HUS 6993039 ENCODE Processing Pipeline 185f86ec63185add01c6ef2a769afee1 https://www.encodeproject.org/files/ENCFF671GGV/@@download/ENCFF671GGV.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF711PSU bigBed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF671GGV 12177450 ENCODE Processing Pipeline db5aea1e123f55c9f390b4406a5a613c https://www.encodeproject.org/files/ENCFF711PSU/@@download/ENCFF711PSU.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF947BLB bigBed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF201UEN 12657161 ENCODE Processing Pipeline ee65dd12d49a90bff6cd833dee162c6d https://www.encodeproject.org/files/ENCFF947BLB/@@download/ENCFF947BLB.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF661FMB bed narrowPeak optimal idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF201UEN, ENCFF419RSJ, ENCFF439SFD, ENCFF671GGV 312895 ENCODE Processing Pipeline 44faaa2741c9021d9b8257fcca2ea2cb https://www.encodeproject.org/files/ENCFF661FMB/@@download/ENCFF661FMB.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF049FPS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF112SWI 531254 ENCODE Processing Pipeline c159669b462311d6468b50eb5a00d4ff https://www.encodeproject.org/files/ENCFF049FPS/@@download/ENCFF049FPS.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF201UEN bed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF460FPN, ENCFF537DAJ 6850120 ENCODE Processing Pipeline ddcef1c4a424871f795eb8d59e0a4d79 https://www.encodeproject.org/files/ENCFF201UEN/@@download/ENCFF201UEN.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF112SWI bed narrowPeak conservative idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF201UEN, ENCFF419RSJ, ENCFF439SFD, ENCFF671GGV 248510 ENCODE Processing Pipeline c4d43674581b9d0fe6623ef003f9dfb6 https://www.encodeproject.org/files/ENCFF112SWI/@@download/ENCFF112SWI.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF359XTI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF661FMB 629393 ENCODE Processing Pipeline 1e6fd19c9b4f3d49c3f1f78ad87cf1b9 https://www.encodeproject.org/files/ENCFF359XTI/@@download/ENCFF359XTI.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF130IRQ bigWig signal p-value ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF420JTZ, ENCFF508HCX 656112496 ENCODE Processing Pipeline ba81a0c142243f14b5fb3539aacb0284 https://www.encodeproject.org/files/ENCFF130IRQ/@@download/ENCFF130IRQ.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF869CSW bigWig signal p-value ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF441NFC, ENCFF508HCX 663110805 ENCODE Processing Pipeline 0bfcacffd32f01bd8963c81283c8d6eb https://www.encodeproject.org/files/ENCFF869CSW/@@download/ENCFF869CSW.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF304JAD bigWig fold change over control ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF420JTZ, ENCFF508HCX 617514873 ENCODE Processing Pipeline bd844834bfec7474c6fed6a27b6b25d9 https://www.encodeproject.org/files/ENCFF304JAD/@@download/ENCFF304JAD.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF181SIR bigWig signal p-value ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF420JTZ, ENCFF441NFC, ENCFF508HCX 803613127 ENCODE Processing Pipeline 1bc3e9fe3d801217d11eb1a5ac3f2a1c https://www.encodeproject.org/files/ENCFF181SIR/@@download/ENCFF181SIR.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF040FGY bigWig fold change over control ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF441NFC, ENCFF508HCX 619634162 ENCODE Processing Pipeline 0fa995e15862c3aa3c2917a0b8d2e2f8 https://www.encodeproject.org/files/ENCFF040FGY/@@download/ENCFF040FGY.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF906VFS bigWig fold change over control ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF420JTZ, ENCFF441NFC, ENCFF508HCX 1021987491 ENCODE Processing Pipeline 8ffbdad3616b5a7610229492369b0eb3 https://www.encodeproject.org/files/ENCFF906VFS/@@download/ENCFF906VFS.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF574RLW bed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF441NFC, ENCFF508HCX 7111374 ENCODE Processing Pipeline cf8a5f09dbdfe47045ca6d490ea4c67b https://www.encodeproject.org/files/ENCFF574RLW/@@download/ENCFF574RLW.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF457WBH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF611WSJ 526229 ENCODE Processing Pipeline db95f295b87078b33061d56260c5e6b4 https://www.encodeproject.org/files/ENCFF457WBH/@@download/ENCFF457WBH.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF202XQV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF413VUC 645882 ENCODE Processing Pipeline 8328d21cb9c40bf1aa0e417021698cd1 https://www.encodeproject.org/files/ENCFF202XQV/@@download/ENCFF202XQV.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF611WSJ bed narrowPeak conservative idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF496UYK, ENCFF574RLW, ENCFF600RTA 244271 ENCODE Processing Pipeline e04c0db5534192819aaab3547f10e094 https://www.encodeproject.org/files/ENCFF611WSJ/@@download/ENCFF611WSJ.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF496UYK bed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF420JTZ, ENCFF508HCX 6892196 ENCODE Processing Pipeline 6249aeafbda77ae037a51105225000bc https://www.encodeproject.org/files/ENCFF496UYK/@@download/ENCFF496UYK.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF600RTA bed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF420JTZ, ENCFF441NFC, ENCFF508HCX 7195967 ENCODE Processing Pipeline 8529367d407e1d60f0a7c73d126a97b2 https://www.encodeproject.org/files/ENCFF600RTA/@@download/ENCFF600RTA.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF101PFI bigBed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1 ENCFF496UYK 12687514 ENCODE Processing Pipeline 7729517f0f7f2c687e2cd9fdc0e539d8 https://www.encodeproject.org/files/ENCFF101PFI/@@download/ENCFF101PFI.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF820WNI bigBed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 2 ENCFF574RLW 12329614 ENCODE Processing Pipeline 54fb29b546488a235958cbf9a80677b6 https://www.encodeproject.org/files/ENCFF820WNI/@@download/ENCFF820WNI.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF149NUP bigBed narrowPeak peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF600RTA 12374793 ENCODE Processing Pipeline 5c122c01c3211b49381307cd26ee44fa https://www.encodeproject.org/files/ENCFF149NUP/@@download/ENCFF149NUP.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF413VUC bed narrowPeak optimal idr thresholded peaks ENCSR000BRH ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MTA3-human ENCAB000AIS DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF496UYK, ENCFF574RLW, ENCFF600RTA 322940 ENCODE Processing Pipeline 986211e162ebe80002d15d053f4e37f8 https://www.encodeproject.org/files/ENCFF413VUC/@@download/ENCFF413VUC.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000QUJ bigBed broadPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UOL 151127 Richard Myers, HAIB 3d2508fa17bcc72a83c2c15cf4ce4d44 https://www.encodeproject.org/files/ENCFF000QUJ/@@download/ENCFF000QUJ.bigBed hg19 archived inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QUK bigBed broadPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UOM 203248 Richard Myers, HAIB 7c0f37c52438f6db476be3373614e4bd https://www.encodeproject.org/files/ENCFF000QUK/@@download/ENCFF000QUK.bigBed hg19 archived inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QUM bam alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QUV 1467309856 Richard Myers, HAIB 58cadcf868d7a8ba2c1b47aad28d2aff https://www.encodeproject.org/files/ENCFF000QUM/@@download/ENCFF000QUM.bam hg19 archived inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QUN bigWig raw signal ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 13635132 Richard Myers, HAIB 62e497e29b7175b5da8baa0412040e9d https://www.encodeproject.org/files/ENCFF000QUN/@@download/ENCFF000QUN.bigWig hg19 archived inconsistent platforms, control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QUO bigWig raw signal ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 19994008 Richard Myers, HAIB fb502a0a894a1d58904eafba9da21e62 https://www.encodeproject.org/files/ENCFF000QUO/@@download/ENCFF000QUO.bigWig hg19 archived inconsistent platforms, control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QUP bam alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QUX 1501067865 Richard Myers, HAIB b947758bd1b6615bea67f2238f022719 https://www.encodeproject.org/files/ENCFF000QUP/@@download/ENCFF000QUP.bam hg19 archived inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QUV fastq reads ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1243927137 Richard Myers, HAIB fae0cb4322c4a3c095fd40e54dac7a73 https://www.encodeproject.org/files/ENCFF000QUV/@@download/ENCFF000QUV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QVO/ released inconsistent platforms, control low read depth, inconsistent control read length, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QUX fastq reads ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1143906186 Richard Myers, HAIB 93f49bd4b9f393bc398f13d9fd390055 https://www.encodeproject.org/files/ENCFF000QUX/@@download/ENCFF000QUX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QVV/ released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001UOL bed broadPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 75695 Richard Myers, HAIB 2c850a59ca2098e1b243ff5dc932b306 https://www.encodeproject.org/files/ENCFF001UOL/@@download/ENCFF001UOL.bed.gz hg19 archived inconsistent platforms, control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001UOM bed broadPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 94605 Richard Myers, HAIB 73093a1852feca2822ba527cf6d8e7dd https://www.encodeproject.org/files/ENCFF001UOM/@@download/ENCFF001UOM.bed.gz hg19 archived inconsistent platforms, control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF002CNE bed narrowPeak optimal idr thresholded peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 291398 ENCODE Consortium Analysis Working Group 45465964c5600b97d486d93dc96588df https://www.encodeproject.org/files/ENCFF002CNE/@@download/ENCFF002CNE.bed.gz hg19 archived inconsistent platforms, control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF191NQM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE ENCFF002CNE 800110 ENCODE Consortium f1b2f1d296c0dacb904f69886435cc31 https://www.encodeproject.org/files/ENCFF191NQM/@@download/ENCFF191NQM.bigBed hg19 archived inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF474ZRD bam unfiltered alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QUV, ENCFF643CGH 1441542760 ENCODE Processing Pipeline adc5183a86b9de684a292da3c6b777ee https://www.encodeproject.org/files/ENCFF474ZRD/@@download/ENCFF474ZRD.bam GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF832LYJ bam alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QUV, ENCFF643CGH 454042951 ENCODE Processing Pipeline b72ae77542600916f6ecd91e87b47348 https://www.encodeproject.org/files/ENCFF832LYJ/@@download/ENCFF832LYJ.bam GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF896NTZ bam alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QUX, ENCFF643CGH 532767572 ENCODE Processing Pipeline 3d64acdd694f428adf3bc14707985fad https://www.encodeproject.org/files/ENCFF896NTZ/@@download/ENCFF896NTZ.bam GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF478XUA bam unfiltered alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QUX, ENCFF643CGH 1359979416 ENCODE Processing Pipeline 85617e2023e8326532c2dc81e7611212 https://www.encodeproject.org/files/ENCFF478XUA/@@download/ENCFF478XUA.bam GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF163XBE bam unfiltered alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QUX, ENCFF807MUK 1357264956 ENCODE Processing Pipeline cba896d5518bc12e25a648d631cfc2d8 https://www.encodeproject.org/files/ENCFF163XBE/@@download/ENCFF163XBE.bam hg19 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF057UIK bam unfiltered alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QUV, ENCFF807MUK 1439729328 ENCODE Processing Pipeline b40792620082e529b698326794c977ea https://www.encodeproject.org/files/ENCFF057UIK/@@download/ENCFF057UIK.bam hg19 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF828LQL bam alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QUV, ENCFF807MUK 454337599 ENCODE Processing Pipeline a7844dfcaaaf2126d23ed932e72e8c3e https://www.encodeproject.org/files/ENCFF828LQL/@@download/ENCFF828LQL.bam hg19 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF960SZZ bam alignments ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QUX, ENCFF807MUK 533239470 ENCODE Processing Pipeline 325c95269b21077662caaf99794fb766 https://www.encodeproject.org/files/ENCFF960SZZ/@@download/ENCFF960SZZ.bam hg19 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF971CRH bigWig signal p-value ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF531HIX, ENCFF575DMX, ENCFF832LYJ 380406620 ENCODE Processing Pipeline ce92d001d226233f8eb08c6fe7cf9273 https://www.encodeproject.org/files/ENCFF971CRH/@@download/ENCFF971CRH.bigWig GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF573XGR bigWig signal p-value ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF531HIX, ENCFF575DMX, ENCFF896NTZ 384758771 ENCODE Processing Pipeline d7d7e7fa668e65d729cc6b8bdb7a65e1 https://www.encodeproject.org/files/ENCFF573XGR/@@download/ENCFF573XGR.bigWig GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF908PVJ bigWig signal p-value ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF531HIX, ENCFF575DMX, ENCFF832LYJ, ENCFF896NTZ 473746088 ENCODE Processing Pipeline b65e361329ea477d2318fcf4374c63f9 https://www.encodeproject.org/files/ENCFF908PVJ/@@download/ENCFF908PVJ.bigWig GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF107UMS bigWig fold change over control ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF531HIX, ENCFF575DMX, ENCFF832LYJ 200688044 ENCODE Processing Pipeline 3e622d960a7e93fa9cf487a1a14e0c53 https://www.encodeproject.org/files/ENCFF107UMS/@@download/ENCFF107UMS.bigWig GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF052QSZ bigWig fold change over control ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF531HIX, ENCFF575DMX, ENCFF896NTZ 261989656 ENCODE Processing Pipeline 6ab32be13749d6da76b598f18af9b383 https://www.encodeproject.org/files/ENCFF052QSZ/@@download/ENCFF052QSZ.bigWig GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF804WLB bed narrowPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF531HIX, ENCFF575DMX, ENCFF832LYJ 2884544 ENCODE Processing Pipeline 3dd1d6a97674b7df7b2968e8099737a0 https://www.encodeproject.org/files/ENCFF804WLB/@@download/ENCFF804WLB.bed.gz GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF631ILW bigWig fold change over control ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF531HIX, ENCFF575DMX, ENCFF832LYJ, ENCFF896NTZ 392982011 ENCODE Processing Pipeline d8e50c5a6bb4c5d508006b6d11285dc8 https://www.encodeproject.org/files/ENCFF631ILW/@@download/ENCFF631ILW.bigWig GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF994QQW bed narrowPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF531HIX, ENCFF575DMX, ENCFF896NTZ 4232868 ENCODE Processing Pipeline 78a38bd5e91c263fe884b1592c15e252 https://www.encodeproject.org/files/ENCFF994QQW/@@download/ENCFF994QQW.bed.gz GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF233ZDP bed narrowPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF531HIX, ENCFF575DMX, ENCFF832LYJ, ENCFF896NTZ 4964003 ENCODE Processing Pipeline 00a500565c7be2f310b657280025f534 https://www.encodeproject.org/files/ENCFF233ZDP/@@download/ENCFF233ZDP.bed.gz GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF063OVF bigBed narrowPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF233ZDP 10910779 ENCODE Processing Pipeline d52abd8a0f1515dc48c7d7d7ebe80252 https://www.encodeproject.org/files/ENCFF063OVF/@@download/ENCFF063OVF.bigBed GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF857XMW bigBed narrowPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF804WLB 6728150 ENCODE Processing Pipeline 6bcc099ac110a338522e38e1a73476d5 https://www.encodeproject.org/files/ENCFF857XMW/@@download/ENCFF857XMW.bigBed GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF593PWD bigBed narrowPeak peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF994QQW 9709151 ENCODE Processing Pipeline 9d841f24f0429c28e71356ed1f8fd6ae https://www.encodeproject.org/files/ENCFF593PWD/@@download/ENCFF593PWD.bigBed GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF023KWU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF633NFW 245469 ENCODE Processing Pipeline b6b7c502b7b09ece6cdd306ea2623459 https://www.encodeproject.org/files/ENCFF023KWU/@@download/ENCFF023KWU.bigBed GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF633NFW bed narrowPeak conservative idr thresholded peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF233ZDP, ENCFF419RSJ, ENCFF804WLB, ENCFF994QQW 113132 ENCODE Processing Pipeline 7ffadee3bf63a60118c2238942a0149f https://www.encodeproject.org/files/ENCFF633NFW/@@download/ENCFF633NFW.bed.gz GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF668YET bed narrowPeak optimal idr thresholded peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF233ZDP, ENCFF419RSJ, ENCFF804WLB, ENCFF994QQW 134846 ENCODE Processing Pipeline 8fcd17ac07e060847d2b4986c1cfe6e2 https://www.encodeproject.org/files/ENCFF668YET/@@download/ENCFF668YET.bed.gz GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF138EMM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJP ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF668YET 275731 ENCODE Processing Pipeline d2e75bde48a5f6671b670e142d118cd6 https://www.encodeproject.org/files/ENCFF138EMM/@@download/ENCFF138EMM.bigBed GRCh38 released inconsistent platforms, control low read depth, low read length, low read depth biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001RUH fastq reads ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1480878217 Richard Myers, HAIB c16ac9408e33823e42fd1133fd2146c9 SRA:SRR5331591 https://www.encodeproject.org/files/ENCFF001RUH/@@download/ENCFF001RUH.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption, low read depth ENCFF001RUI fastq reads ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1559150340 Richard Myers, HAIB a600ab1dc96375bf2d7975dce928dc32 SRA:SRR5331590 https://www.encodeproject.org/files/ENCFF001RUI/@@download/ENCFF001RUI.fastq.gz HiSeq 2000 /files/ENCFF001RVP/ released antibody characterized with exemption, low read depth ENCFF427TQP bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF012IGR, ENCFF061QOJ, ENCFF527GGD, ENCFF578ISP 1271113685 ENCODE Processing Pipeline 4183f71156f0b6f997351f8f0d030019 https://www.encodeproject.org/files/ENCFF427TQP/@@download/ENCFF427TQP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF691MGC bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF012IGR, ENCFF061QOJ, ENCFF527GGD, ENCFF578ISP 1326771089 ENCODE Processing Pipeline e06d810716c9ed4897848e71bef2b1f3 https://www.encodeproject.org/files/ENCFF691MGC/@@download/ENCFF691MGC.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF463AYG bam unfiltered alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUH, ENCFF643CGH 1580201262 ENCODE Processing Pipeline a11fbc346a4fb63f033f628de065334f https://www.encodeproject.org/files/ENCFF463AYG/@@download/ENCFF463AYG.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF735PTW bam unfiltered alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUI, ENCFF643CGH 1674219884 ENCODE Processing Pipeline 9862a7eb37a6af23a0334ce1e5d30270 https://www.encodeproject.org/files/ENCFF735PTW/@@download/ENCFF735PTW.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF677BBS bam alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUI, ENCFF643CGH 1241088305 ENCODE Processing Pipeline 128e9cfe034d16507d3bc51c92cd3771 https://www.encodeproject.org/files/ENCFF677BBS/@@download/ENCFF677BBS.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF983RUX bam alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUH, ENCFF643CGH 1153392054 ENCODE Processing Pipeline b73068fdac151ee94d27a4e009b927e8 https://www.encodeproject.org/files/ENCFF983RUX/@@download/ENCFF983RUX.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF437KWO bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF677BBS 876281877 ENCODE Processing Pipeline 07928b239ae8ef985e58b1844f0f176b https://www.encodeproject.org/files/ENCFF437KWO/@@download/ENCFF437KWO.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF781GHU bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF983RUX 693545852 ENCODE Processing Pipeline 02f790212fc1d754d28b90292fb07bd2 https://www.encodeproject.org/files/ENCFF781GHU/@@download/ENCFF781GHU.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF455FBB bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF332SVJ, ENCFF677BBS, ENCFF983RUX 1280583447 ENCODE Processing Pipeline ea1a39af7374eb130685dca3d2523518 https://www.encodeproject.org/files/ENCFF455FBB/@@download/ENCFF455FBB.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF492JGM bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF677BBS 596686013 ENCODE Processing Pipeline b3bef352044217ccce0ccb21c6e5fabf https://www.encodeproject.org/files/ENCFF492JGM/@@download/ENCFF492JGM.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF527LDL bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF983RUX 522924648 ENCODE Processing Pipeline 603b68da5cf3f4330667578710605810 https://www.encodeproject.org/files/ENCFF527LDL/@@download/ENCFF527LDL.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF442BPG bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF332SVJ, ENCFF677BBS, ENCFF983RUX 1248418248 ENCODE Processing Pipeline ff18c6f8ab9e706c0bf0f6b3288be34f https://www.encodeproject.org/files/ENCFF442BPG/@@download/ENCFF442BPG.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF823BLX bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF933RQE 11175202 ENCODE Processing Pipeline 9e7a8e1da9883b8bb53bf68fa116a3c4 https://www.encodeproject.org/files/ENCFF823BLX/@@download/ENCFF823BLX.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF090LNP bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF775JQN 11405699 ENCODE Processing Pipeline 8488f0af981670730ac7c2f787c36097 https://www.encodeproject.org/files/ENCFF090LNP/@@download/ENCFF090LNP.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF692UXG bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF983RUX 5096786 ENCODE Processing Pipeline f99d7704310b119804fde0f9e66e8957 https://www.encodeproject.org/files/ENCFF692UXG/@@download/ENCFF692UXG.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF933RQE bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF677BBS 5145493 ENCODE Processing Pipeline 11a191ad1719dfa3fd71f2ae995cf63c https://www.encodeproject.org/files/ENCFF933RQE/@@download/ENCFF933RQE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF775JQN bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF332SVJ, ENCFF677BBS, ENCFF983RUX 6525116 ENCODE Processing Pipeline 319a5a7cf20096c69ee770664e2d48b4 https://www.encodeproject.org/files/ENCFF775JQN/@@download/ENCFF775JQN.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF761BJK bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF692UXG 11058907 ENCODE Processing Pipeline 9d6f1dceee888637d7e958cd3fb0a0b3 https://www.encodeproject.org/files/ENCFF761BJK/@@download/ENCFF761BJK.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF830UEH bed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF692UXG, ENCFF775JQN, ENCFF933RQE 120652 ENCODE Processing Pipeline fa200eedc4e96c25daeacf1ebc412940 https://www.encodeproject.org/files/ENCFF830UEH/@@download/ENCFF830UEH.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF071NYD bed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF692UXG, ENCFF775JQN, ENCFF933RQE 138537 ENCODE Processing Pipeline 529e27cb03d15bfeee667ecbcfc0a4bf https://www.encodeproject.org/files/ENCFF071NYD/@@download/ENCFF071NYD.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF347CNP bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF830UEH 237762 ENCODE Processing Pipeline a35beccaad4e4ce20fde0c2fbcd61494 https://www.encodeproject.org/files/ENCFF347CNP/@@download/ENCFF347CNP.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF193HSB bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF071NYD 315803 ENCODE Processing Pipeline 46061efbc875c61cac9d2d6b85f75e6b https://www.encodeproject.org/files/ENCFF193HSB/@@download/ENCFF193HSB.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF502SWV bam unfiltered alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUI, ENCFF807MUK 1670536675 ENCODE Processing Pipeline 549755219aa5a2bed27a27a7d5f19e8c https://www.encodeproject.org/files/ENCFF502SWV/@@download/ENCFF502SWV.bam hg19 released antibody characterized with exemption, low read depth ENCFF012IGR bam alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUI, ENCFF807MUK 1241523705 ENCODE Processing Pipeline d0bf75cc52f6b6a559a482c3c7ea2334 https://www.encodeproject.org/files/ENCFF012IGR/@@download/ENCFF012IGR.bam hg19 released antibody characterized with exemption, low read depth ENCFF077BCA bam unfiltered alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUH, ENCFF807MUK 1577181969 ENCODE Processing Pipeline 49b2276076f7c8139a884cef523c7932 https://www.encodeproject.org/files/ENCFF077BCA/@@download/ENCFF077BCA.bam hg19 released antibody characterized with exemption, low read depth ENCFF527GGD bam alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUH, ENCFF807MUK 1153861968 ENCODE Processing Pipeline 51288055255fa5fef100954b6c5f43bc https://www.encodeproject.org/files/ENCFF527GGD/@@download/ENCFF527GGD.bam hg19 released antibody characterized with exemption, low read depth ENCFF304WLL bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF012IGR, ENCFF578ISP 598239403 ENCODE Processing Pipeline 908b6c890deb2fb0cffe4d8686b568b7 https://www.encodeproject.org/files/ENCFF304WLL/@@download/ENCFF304WLL.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF616LVN bed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF175RNO, ENCFF373SQY, ENCFF472YHR 130606 ENCODE Processing Pipeline b10e96e443b6ef583669219f71f72a11 https://www.encodeproject.org/files/ENCFF616LVN/@@download/ENCFF616LVN.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF582FUR bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF527GGD 539880543 ENCODE Processing Pipeline e15ec4b52583c7ca5006c5935c1eb2cb https://www.encodeproject.org/files/ENCFF582FUR/@@download/ENCFF582FUR.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF175RNO bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF012IGR, ENCFF061QOJ, ENCFF527GGD, ENCFF578ISP 6524209 ENCODE Processing Pipeline b006770fcaf5952edc18c06c66e6941d https://www.encodeproject.org/files/ENCFF175RNO/@@download/ENCFF175RNO.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF112FJR bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF527GGD 709555043 ENCODE Processing Pipeline 43e0e9a187a250f4e717d54107303333 https://www.encodeproject.org/files/ENCFF112FJR/@@download/ENCFF112FJR.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF472YHR bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF527GGD 5360673 ENCODE Processing Pipeline 3eef564b1fbc3ea5f95219df16d69765 https://www.encodeproject.org/files/ENCFF472YHR/@@download/ENCFF472YHR.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF050UWJ bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF012IGR, ENCFF578ISP 750447473 ENCODE Processing Pipeline 93d15c598714406e3247892b19ae6761 https://www.encodeproject.org/files/ENCFF050UWJ/@@download/ENCFF050UWJ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF224CHN bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF175RNO 11375341 ENCODE Processing Pipeline 33dc80308193c77e6a927de63232d665 https://www.encodeproject.org/files/ENCFF224CHN/@@download/ENCFF224CHN.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF373SQY bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF012IGR, ENCFF578ISP 5147423 ENCODE Processing Pipeline 73a37eb0fe3c63684da32b63ebfb2efc https://www.encodeproject.org/files/ENCFF373SQY/@@download/ENCFF373SQY.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF195WNG bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF373SQY 11165611 ENCODE Processing Pipeline f3289bde1ead8c68ab625703685a3933 https://www.encodeproject.org/files/ENCFF195WNG/@@download/ENCFF195WNG.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF096AYG bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF616LVN 304039 ENCODE Processing Pipeline 65692d0dc56d49712deb42385bb02430 https://www.encodeproject.org/files/ENCFF096AYG/@@download/ENCFF096AYG.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF954ZEK bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF472YHR 11130941 ENCODE Processing Pipeline 63f561601a41a675e7f18e13f8470b7e https://www.encodeproject.org/files/ENCFF954ZEK/@@download/ENCFF954ZEK.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF522LWR bed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF175RNO, ENCFF373SQY, ENCFF472YHR 116149 ENCODE Processing Pipeline 834438d958584db57bb090e19d02c420 https://www.encodeproject.org/files/ENCFF522LWR/@@download/ENCFF522LWR.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF272SYB bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF522LWR 230652 ENCODE Processing Pipeline 03f1a0cf9f019abdaddbab48a0740ef9 https://www.encodeproject.org/files/ENCFF272SYB/@@download/ENCFF272SYB.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF000NWW bam alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NXE 501637082 Richard Myers, HAIB 44c45079e73465a3d5ab9540d5b56028 https://www.encodeproject.org/files/ENCFF000NWW/@@download/ENCFF000NWW.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NWX bigBed broadPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TXK 72732 Richard Myers, HAIB 0d0ed8abda769af8b6e0261fbd19dec1 https://www.encodeproject.org/files/ENCFF000NWX/@@download/ENCFF000NWX.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NWY bigBed broadPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TXL 314508 Richard Myers, HAIB 326eff59fe8a771539063e5941330222 https://www.encodeproject.org/files/ENCFF000NWY/@@download/ENCFF000NWY.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NWZ bam alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NXJ 858294027 Richard Myers, HAIB b973ab4432f19057d95d5ae65e19d40f https://www.encodeproject.org/files/ENCFF000NWZ/@@download/ENCFF000NWZ.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NXB bigWig raw signal ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 1 3798343 Richard Myers, HAIB c2d596c454d9307376cad1d5da509dc2 https://www.encodeproject.org/files/ENCFF000NXB/@@download/ENCFF000NXB.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NXD bigWig raw signal ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 1 10133425 Richard Myers, HAIB 404ee81878b81dbe2b298a48f4f5e6e7 https://www.encodeproject.org/files/ENCFF000NXD/@@download/ENCFF000NXD.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NXE fastq reads ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 445880471 Richard Myers, HAIB c87a6e0d6c5e5c59946f985b0b398494 https://www.encodeproject.org/files/ENCFF000NXE/@@download/ENCFF000NXE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NXJ fastq reads ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 767402556 Richard Myers, HAIB 1df63db4f86c4f057041ff7a58f27240 https://www.encodeproject.org/files/ENCFF000NXJ/@@download/ENCFF000NXJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001TXK bed broadPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 1 15957 Richard Myers, HAIB 5fce143cd102115d65f5407c86b33fc1 https://www.encodeproject.org/files/ENCFF001TXK/@@download/ENCFF001TXK.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001TXL bed broadPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 1 138674 Richard Myers, HAIB cd955d73c911652b3355a89dc0b2edf6 https://www.encodeproject.org/files/ENCFF001TXL/@@download/ENCFF001TXL.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF002CHD bed narrowPeak optimal idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 180187 ENCODE Consortium Analysis Working Group cc95db1f7a06b5a71c2aa393c3256bac https://www.encodeproject.org/files/ENCFF002CHD/@@download/ENCFF002CHD.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF635XDD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE ENCFF002CHD 392697 ENCODE Consortium bae1eae00994a7ed14524a11c470f5f6 https://www.encodeproject.org/files/ENCFF635XDD/@@download/ENCFF635XDD.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF013EWV bam unfiltered alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NXE, ENCFF643CGH 584631537 ENCODE Processing Pipeline ab5fd6be24168792c550a1b5ee9f2f5e https://www.encodeproject.org/files/ENCFF013EWV/@@download/ENCFF013EWV.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF191UHV bam alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NXE, ENCFF643CGH 266709769 ENCODE Processing Pipeline 46e097d33be62d58a10791ac36aab2f1 https://www.encodeproject.org/files/ENCFF191UHV/@@download/ENCFF191UHV.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF665BAJ bam alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NXJ, ENCFF643CGH 562405034 ENCODE Processing Pipeline 786a29b8b53155de71b35fd531814693 https://www.encodeproject.org/files/ENCFF665BAJ/@@download/ENCFF665BAJ.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF575FBF bam unfiltered alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NXJ, ENCFF643CGH 1003429943 ENCODE Processing Pipeline fdb037703dc81094239158d8213b52ee https://www.encodeproject.org/files/ENCFF575FBF/@@download/ENCFF575FBF.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF161DMX bam unfiltered alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NXE, ENCFF807MUK 583934443 ENCODE Processing Pipeline 78f5a2746bc2b93dc7ee9d76387db614 https://www.encodeproject.org/files/ENCFF161DMX/@@download/ENCFF161DMX.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF195HFC bam alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NXE, ENCFF807MUK 263852803 ENCODE Processing Pipeline c12a93f450e4d5bc04edca4ee50c8d70 https://www.encodeproject.org/files/ENCFF195HFC/@@download/ENCFF195HFC.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF810SZD bam unfiltered alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NXJ, ENCFF807MUK 1006168129 ENCODE Processing Pipeline 9b8fb9f65b40ed50480fe619187d2f27 https://www.encodeproject.org/files/ENCFF810SZD/@@download/ENCFF810SZD.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF840QLL bam alignments ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NXJ, ENCFF807MUK 556612043 ENCODE Processing Pipeline 06bc35d694950b40a0026bbcf830ecf7 https://www.encodeproject.org/files/ENCFF840QLL/@@download/ENCFF840QLL.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF415HRV bigWig signal p-value ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF191UHV, ENCFF488YYE 384751670 ENCODE Processing Pipeline cb3d7184b05213348baceef236cc5cae https://www.encodeproject.org/files/ENCFF415HRV/@@download/ENCFF415HRV.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF832IPZ bigWig fold change over control ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF488YYE, ENCFF665BAJ 307679673 ENCODE Processing Pipeline 4e9429437fdc1b90ad9ec8a9f5eb8e66 https://www.encodeproject.org/files/ENCFF832IPZ/@@download/ENCFF832IPZ.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF291WBN bigWig signal p-value ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF488YYE, ENCFF665BAJ 384039897 ENCODE Processing Pipeline 22023d19109a7507d2f43421024dc958 https://www.encodeproject.org/files/ENCFF291WBN/@@download/ENCFF291WBN.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF557ZWN bed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF191UHV, ENCFF488YYE, ENCFF665BAJ 4767893 ENCODE Processing Pipeline d1fdba47e4a42621ce078275da07bbf3 https://www.encodeproject.org/files/ENCFF557ZWN/@@download/ENCFF557ZWN.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF492EEW bigWig fold change over control ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF191UHV, ENCFF488YYE 174977660 ENCODE Processing Pipeline 3ff939d304f06c9685b2291c39985fbf https://www.encodeproject.org/files/ENCFF492EEW/@@download/ENCFF492EEW.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF878VND bigBed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF557ZWN 10938776 ENCODE Processing Pipeline 0fef616faff9af87b6d6e3c8738ddbe3 https://www.encodeproject.org/files/ENCFF878VND/@@download/ENCFF878VND.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF295QTX bigWig signal p-value ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF191UHV, ENCFF488YYE, ENCFF665BAJ 467713078 ENCODE Processing Pipeline 05e1b3ec40e8e3c624c710cc89eb5910 https://www.encodeproject.org/files/ENCFF295QTX/@@download/ENCFF295QTX.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF872HOJ bigWig fold change over control ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF191UHV, ENCFF488YYE, ENCFF665BAJ 421741951 ENCODE Processing Pipeline ea8a8fbd9a927f99dca290b9929dd898 https://www.encodeproject.org/files/ENCFF872HOJ/@@download/ENCFF872HOJ.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF186CJG bed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF191UHV, ENCFF488YYE 2726254 ENCODE Processing Pipeline 4886edeb62a7f3149c0785c7c2eb1d56 https://www.encodeproject.org/files/ENCFF186CJG/@@download/ENCFF186CJG.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF720VWD bed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF488YYE, ENCFF665BAJ 4548047 ENCODE Processing Pipeline 0442b51e3fa82ecf791d0cf88ded3d27 https://www.encodeproject.org/files/ENCFF720VWD/@@download/ENCFF720VWD.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF080JZQ bigBed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF720VWD 10589093 ENCODE Processing Pipeline 521007bb045027b26fc4b6d555dcee35 https://www.encodeproject.org/files/ENCFF080JZQ/@@download/ENCFF080JZQ.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF468GCV bed narrowPeak conservative idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF186CJG, ENCFF419RSJ, ENCFF557ZWN, ENCFF720VWD 74931 ENCODE Processing Pipeline cd77510e1caf417b2fc4da26fdfd844b https://www.encodeproject.org/files/ENCFF468GCV/@@download/ENCFF468GCV.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF845OMO bigBed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF186CJG 5956764 ENCODE Processing Pipeline 97fef6c99e03e21989c34d9b02585b33 https://www.encodeproject.org/files/ENCFF845OMO/@@download/ENCFF845OMO.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF423TWT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF468GCV 180461 ENCODE Processing Pipeline f4bc5f491c161542601d591f4cb9f46d https://www.encodeproject.org/files/ENCFF423TWT/@@download/ENCFF423TWT.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF830BRO bed narrowPeak optimal idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF186CJG, ENCFF419RSJ, ENCFF557ZWN, ENCFF720VWD 208861 ENCODE Processing Pipeline 5cc3b67aced5510b82769d0c2f9f5cd8 https://www.encodeproject.org/files/ENCFF830BRO/@@download/ENCFF830BRO.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF191FWB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF830BRO 429143 ENCODE Processing Pipeline b028e6bfbe63f43778cd397191ed8711 https://www.encodeproject.org/files/ENCFF191FWB/@@download/ENCFF191FWB.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF828VAA bigWig signal p-value ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF840QLL, ENCFF963CVB 364522154 ENCODE Processing Pipeline 880af93a4d00aa7350bf0dd52844859f https://www.encodeproject.org/files/ENCFF828VAA/@@download/ENCFF828VAA.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF563GOS bigWig fold change over control ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF195HFC, ENCFF963CVB 175003805 ENCODE Processing Pipeline 9a2dceed6b2657a1ae1b62a9a76e1a6c https://www.encodeproject.org/files/ENCFF563GOS/@@download/ENCFF563GOS.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF484OTT bigWig signal p-value ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF195HFC, ENCFF963CVB 336343845 ENCODE Processing Pipeline a724e800ca0eefb542a89084d117c215 https://www.encodeproject.org/files/ENCFF484OTT/@@download/ENCFF484OTT.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF555ETY bigWig signal p-value ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF195HFC, ENCFF840QLL, ENCFF963CVB 468179785 ENCODE Processing Pipeline 64510466831c81d4324249c531fa7be8 https://www.encodeproject.org/files/ENCFF555ETY/@@download/ENCFF555ETY.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF845FPS bigWig fold change over control ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF195HFC, ENCFF840QLL, ENCFF963CVB 427195396 ENCODE Processing Pipeline bfea43fe214bb8ad165b9fdaaafb587e https://www.encodeproject.org/files/ENCFF845FPS/@@download/ENCFF845FPS.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF106GZB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF138CXP 168422 ENCODE Processing Pipeline ca5d3684c1a3cc7ac6943ca2dec48370 https://www.encodeproject.org/files/ENCFF106GZB/@@download/ENCFF106GZB.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF906YBW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF261ZWR 422206 ENCODE Processing Pipeline 3f03b652a3ffed113288b8ffed168ba8 https://www.encodeproject.org/files/ENCFF906YBW/@@download/ENCFF906YBW.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF492SNJ bigWig fold change over control ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF840QLL, ENCFF963CVB 307059393 ENCODE Processing Pipeline 2b7cd636fb283ae0f93a754ae16c3b90 https://www.encodeproject.org/files/ENCFF492SNJ/@@download/ENCFF492SNJ.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF815LEF bed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF195HFC, ENCFF963CVB 2732112 ENCODE Processing Pipeline 4fd3d4b814f88379c810cb3453838ba8 https://www.encodeproject.org/files/ENCFF815LEF/@@download/ENCFF815LEF.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF099MXC bed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF840QLL, ENCFF963CVB 4556867 ENCODE Processing Pipeline 4815bbf64cefc1a6c8ecac7b0fb849db https://www.encodeproject.org/files/ENCFF099MXC/@@download/ENCFF099MXC.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF280AHM bigBed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF099MXC 10607374 ENCODE Processing Pipeline 55d815e30729a9a6d811cba211af4db6 https://www.encodeproject.org/files/ENCFF280AHM/@@download/ENCFF280AHM.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF662TQY bigBed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF515LFS 10718414 ENCODE Processing Pipeline 370465385fcce39c8f4846c28617913a https://www.encodeproject.org/files/ENCFF662TQY/@@download/ENCFF662TQY.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF515LFS bed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF195HFC, ENCFF840QLL, ENCFF963CVB 4605454 ENCODE Processing Pipeline df080a7bd275815f61a75344112b6019 https://www.encodeproject.org/files/ENCFF515LFS/@@download/ENCFF515LFS.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF387EMO bigBed narrowPeak peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF815LEF 5976547 ENCODE Processing Pipeline b3ac8ce3a0e76425920d67c03fd84f11 https://www.encodeproject.org/files/ENCFF387EMO/@@download/ENCFF387EMO.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF138CXP bed narrowPeak conservative idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF099MXC, ENCFF515LFS, ENCFF815LEF 66073 ENCODE Processing Pipeline 4fdd5e2ca1e6f3aa2adab2b3cddf7520 https://www.encodeproject.org/files/ENCFF138CXP/@@download/ENCFF138CXP.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF261ZWR bed narrowPeak optimal idr thresholded peaks ENCSR000BNG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens MEF2C-human ENCAB000AIR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF099MXC, ENCFF515LFS, ENCFF815LEF 204157 ENCODE Processing Pipeline 8b99923b94fbef4a4366487ff0ed48f3 https://www.encodeproject.org/files/ENCFF261ZWR/@@download/ENCFF261ZWR.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF408TVU fastq reads ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF834WKY 3032067915 Richard Myers, HAIB 6cd5f9c9c683b6bbb3e605fedc2e90a7 SRA:SRR6212903 https://www.encodeproject.org/files/ENCFF408TVU/@@download/ENCFF408TVU.fastq.gz HiSeq 2000 /files/ENCFF285LRT/ released antibody characterized with exemption ENCFF834WKY fastq reads ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF408TVU 3158074000 Richard Myers, HAIB b2dce80dcfeb0ce7b3d3145af6c98441 SRA:SRR6212903 https://www.encodeproject.org/files/ENCFF834WKY/@@download/ENCFF834WKY.fastq.gz HiSeq 2000 /files/ENCFF568XFG/ released antibody characterized with exemption ENCFF690CAC bam unfiltered alignments ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF408TVU, ENCFF807MUK, ENCFF834WKY 7344037017 ENCODE Processing Pipeline 83a789464bd215be35672e32eeee67cc https://www.encodeproject.org/files/ENCFF690CAC/@@download/ENCFF690CAC.bam hg19 released antibody characterized with exemption ENCFF213HXD bam unfiltered alignments ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF408TVU, ENCFF643CGH, ENCFF834WKY 7377785667 ENCODE Processing Pipeline 341637e75e5ec413200f867264574c50 https://www.encodeproject.org/files/ENCFF213HXD/@@download/ENCFF213HXD.bam GRCh38 released antibody characterized with exemption ENCFF753CCI bam alignments ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF408TVU, ENCFF643CGH, ENCFF834WKY 5537528425 ENCODE Processing Pipeline 5f6529c0cd53ccf8c2ff108b0c404258 https://www.encodeproject.org/files/ENCFF753CCI/@@download/ENCFF753CCI.bam GRCh38 released antibody characterized with exemption ENCFF457XBH bam alignments ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF408TVU, ENCFF807MUK, ENCFF834WKY 5530209001 ENCODE Processing Pipeline d83d48e6df41c9b22734f1600a980ace https://www.encodeproject.org/files/ENCFF457XBH/@@download/ENCFF457XBH.bam hg19 released antibody characterized with exemption ENCFF426NMH bigWig signal p-value ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF457XBH 1950444623 ENCODE Processing Pipeline d3527660810c42f41717d2ecdc8d3c60 https://www.encodeproject.org/files/ENCFF426NMH/@@download/ENCFF426NMH.bigWig hg19 released antibody characterized with exemption ENCFF610UUP bigWig fold change over control ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF457XBH 1833741930 ENCODE Processing Pipeline bdfe5d531cbf922a1fe736d69f8f0f15 https://www.encodeproject.org/files/ENCFF610UUP/@@download/ENCFF610UUP.bigWig hg19 released antibody characterized with exemption ENCFF551NXL bed narrowPeak peaks ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF457XBH 6818115 ENCODE Processing Pipeline 6bcc55f36d892316fbe4013f95cff52e https://www.encodeproject.org/files/ENCFF551NXL/@@download/ENCFF551NXL.bed.gz hg19 released antibody characterized with exemption ENCFF269VDY bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF551NXL 2456 ENCODE Processing Pipeline dca1b8235ec513453264976c4f4b347d https://www.encodeproject.org/files/ENCFF269VDY/@@download/ENCFF269VDY.bed.gz hg19 released antibody characterized with exemption ENCFF279ZHM bigBed narrowPeak peaks ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF551NXL 11661688 ENCODE Processing Pipeline 8e9d3fba724ff2939788f56a1b620a50 https://www.encodeproject.org/files/ENCFF279ZHM/@@download/ENCFF279ZHM.bigBed hg19 released antibody characterized with exemption ENCFF184MII bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF269VDY 75013 ENCODE Processing Pipeline 8b81cb850d93e5af5bb8d4be7e4b8803 https://www.encodeproject.org/files/ENCFF184MII/@@download/ENCFF184MII.bigBed hg19 released antibody characterized with exemption ENCFF331CAB bigWig fold change over control ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF753CCI 1854453003 ENCODE Processing Pipeline 4b839314468e296b85e71fec05dd8e22 https://www.encodeproject.org/files/ENCFF331CAB/@@download/ENCFF331CAB.bigWig GRCh38 released antibody characterized with exemption ENCFF555CQW bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF085MWN 80423 ENCODE Processing Pipeline 563a00cb0d74a2d04b53bbeea0725bcb https://www.encodeproject.org/files/ENCFF555CQW/@@download/ENCFF555CQW.bigBed GRCh38 released antibody characterized with exemption ENCFF020SME bigBed narrowPeak peaks ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF129BFA 11675931 ENCODE Processing Pipeline 4a6878ac1d8ba35ed6d9b8800dbd2c88 https://www.encodeproject.org/files/ENCFF020SME/@@download/ENCFF020SME.bigBed GRCh38 released antibody characterized with exemption ENCFF085MWN bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF129BFA, ENCFF419RSJ 1855 ENCODE Processing Pipeline bd67dc1b9a4987b21c4a2a2a0d289e11 https://www.encodeproject.org/files/ENCFF085MWN/@@download/ENCFF085MWN.bed.gz GRCh38 released antibody characterized with exemption ENCFF627PIV bigWig signal p-value ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF753CCI 1966424755 ENCODE Processing Pipeline 840eef1c2b60561a80fd9c3e41ac2426 https://www.encodeproject.org/files/ENCFF627PIV/@@download/ENCFF627PIV.bigWig GRCh38 released antibody characterized with exemption ENCFF129BFA bed narrowPeak peaks ENCSR176BAH ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF753CCI 6828781 ENCODE Processing Pipeline 1383e1e9d1675fa1e9ee3ce8d1eb96a3 https://www.encodeproject.org/files/ENCFF129BFA/@@download/ENCFF129BFA.bed.gz GRCh38 released antibody characterized with exemption ENCFF137GGC fastq reads ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1363802420 Richard Myers, HAIB fbff43907a117b2f555340f2cd8e77ed SRA:SRR5338741 https://www.encodeproject.org/files/ENCFF137GGC/@@download/ENCFF137GGC.fastq.gz HiSeq 2000 /files/ENCFF002BGD/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF939TTG fastq reads ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1358374567 Richard Myers, HAIB 4a8fe12ae30706fa39ad1ee4da8ca460 SRA:SRR5338742 https://www.encodeproject.org/files/ENCFF939TTG/@@download/ENCFF939TTG.fastq.gz HiSeq 2000 /files/ENCFF820XYY/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF162LLQ bam alignments ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 50 ENCFF137GGC, ENCFF807MUK 1021738373 ENCODE Processing Pipeline e90e07b5d70cfb83fe7cdefdb45af2d4 https://www.encodeproject.org/files/ENCFF162LLQ/@@download/ENCFF162LLQ.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF131GPA bam alignments ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 50 ENCFF807MUK, ENCFF939TTG 1106852999 ENCODE Processing Pipeline c86337970bf8e63d1ffa58d05fdd79da https://www.encodeproject.org/files/ENCFF131GPA/@@download/ENCFF131GPA.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF266NVH bigWig signal p-value ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 ENCFF131GPA, ENCFF925QJE 484928585 ENCODE Processing Pipeline e3d8db046a437ac538b8010bfe82e745 https://www.encodeproject.org/files/ENCFF266NVH/@@download/ENCFF266NVH.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF636BWE bed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF131GPA, ENCFF162LLQ, ENCFF419TYN, ENCFF925QJE 6517828 ENCODE Processing Pipeline 1b6d1cc8a7b92a82922f4f24d308797e https://www.encodeproject.org/files/ENCFF636BWE/@@download/ENCFF636BWE.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF167BLN bigWig signal p-value ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF131GPA, ENCFF162LLQ, ENCFF419TYN, ENCFF925QJE 780170533 ENCODE Processing Pipeline 6d090c93ec2e4d6056742f91a04108bd https://www.encodeproject.org/files/ENCFF167BLN/@@download/ENCFF167BLN.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF850DVA bigBed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 ENCFF682ZLL 11027663 ENCODE Processing Pipeline 954b91d24a0adf616e6f0b69f2bc05bf https://www.encodeproject.org/files/ENCFF850DVA/@@download/ENCFF850DVA.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF619HGM bigBed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 ENCFF628KQC 4302595 ENCODE Processing Pipeline b33f77ee481d9ca0645068ca637d5972 https://www.encodeproject.org/files/ENCFF619HGM/@@download/ENCFF619HGM.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF321JIS bigBed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF636BWE 13410738 ENCODE Processing Pipeline 863a32ed621fe21ceb74e8cb4e9aa0ea https://www.encodeproject.org/files/ENCFF321JIS/@@download/ENCFF321JIS.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF617EWV bigWig signal p-value ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 ENCFF162LLQ, ENCFF419TYN 350974427 ENCODE Processing Pipeline 2a657ec535e2b0b018d8493d4d41dc90 https://www.encodeproject.org/files/ENCFF617EWV/@@download/ENCFF617EWV.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF468JBB bigWig fold change over control ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 ENCFF162LLQ, ENCFF419TYN 368638231 ENCODE Processing Pipeline f466e6084ad34d9108a2d079302178c2 https://www.encodeproject.org/files/ENCFF468JBB/@@download/ENCFF468JBB.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF682ZLL bed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 ENCFF162LLQ, ENCFF419TYN 5356830 ENCODE Processing Pipeline fc900361c68396ee9761d67bcf3aaaf1 https://www.encodeproject.org/files/ENCFF682ZLL/@@download/ENCFF682ZLL.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF950JCI bigWig fold change over control ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 ENCFF131GPA, ENCFF925QJE 435309112 ENCODE Processing Pipeline a16c8acad46887e616c65703120233a7 https://www.encodeproject.org/files/ENCFF950JCI/@@download/ENCFF950JCI.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF396ARC bigWig fold change over control ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF131GPA, ENCFF162LLQ, ENCFF419TYN, ENCFF925QJE 879492095 ENCODE Processing Pipeline 11e90a5f77ed75bba9277da4e500f79a https://www.encodeproject.org/files/ENCFF396ARC/@@download/ENCFF396ARC.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF628KQC bed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 ENCFF131GPA, ENCFF925QJE 2201515 ENCODE Processing Pipeline 619c4a9e07b8a8a8602fe67b799f4a49 https://www.encodeproject.org/files/ENCFF628KQC/@@download/ENCFF628KQC.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF546QWD bam unfiltered alignments ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF939TTG 1467813481 ENCODE Processing Pipeline ce2b6881f56a82b07b9969622d1b64e6 https://www.encodeproject.org/files/ENCFF546QWD/@@download/ENCFF546QWD.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF256BJV bam unfiltered alignments ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 50 ENCFF137GGC, ENCFF643CGH 1444659363 ENCODE Processing Pipeline a8377eca8992f384f96a0f766a07e662 https://www.encodeproject.org/files/ENCFF256BJV/@@download/ENCFF256BJV.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF908SPX bam alignments ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF939TTG 1106836211 ENCODE Processing Pipeline fefc088ff89f6e4385df01bfe90fc179 https://www.encodeproject.org/files/ENCFF908SPX/@@download/ENCFF908SPX.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF010EFV bam alignments ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 50 ENCFF137GGC, ENCFF643CGH 1021640457 ENCODE Processing Pipeline 3066302e93e782edd312103d6393d196 https://www.encodeproject.org/files/ENCFF010EFV/@@download/ENCFF010EFV.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF029GFV bigWig signal p-value ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 ENCFF010EFV, ENCFF113QYJ 490399074 ENCODE Processing Pipeline 378fd87a251dc4f272517970faa35d77 https://www.encodeproject.org/files/ENCFF029GFV/@@download/ENCFF029GFV.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF678XLV bigWig signal p-value ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 ENCFF715ECN, ENCFF908SPX 483272291 ENCODE Processing Pipeline 7d8086872f813c25b703becdd5da23f2 https://www.encodeproject.org/files/ENCFF678XLV/@@download/ENCFF678XLV.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF392VJI bigWig signal p-value ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF010EFV, ENCFF113QYJ, ENCFF715ECN, ENCFF908SPX 705556620 ENCODE Processing Pipeline 1b548a4fac6e259bd775252f1ab49520 https://www.encodeproject.org/files/ENCFF392VJI/@@download/ENCFF392VJI.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF538XLD bigWig fold change over control ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 ENCFF010EFV, ENCFF113QYJ 366229994 ENCODE Processing Pipeline ccbf226bf5f78444140eac94673cb54e https://www.encodeproject.org/files/ENCFF538XLD/@@download/ENCFF538XLD.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF339VMG bigWig fold change over control ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 ENCFF715ECN, ENCFF908SPX 430617030 ENCODE Processing Pipeline 180adf50559b146296acd8281d52653c https://www.encodeproject.org/files/ENCFF339VMG/@@download/ENCFF339VMG.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF717RHJ bigWig fold change over control ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF010EFV, ENCFF113QYJ, ENCFF715ECN, ENCFF908SPX 865950691 ENCODE Processing Pipeline 3490e63590fc45b32abdc05f2330178c https://www.encodeproject.org/files/ENCFF717RHJ/@@download/ENCFF717RHJ.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF157NWN bed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 ENCFF010EFV, ENCFF113QYJ 5081270 ENCODE Processing Pipeline 1a76ca1fbcfc39538fd8305e3f397427 https://www.encodeproject.org/files/ENCFF157NWN/@@download/ENCFF157NWN.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF981LYA bigBed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1 ENCFF157NWN 10906077 ENCODE Processing Pipeline 0ce821cdf5fe9e4bc91e55996ef806e0 https://www.encodeproject.org/files/ENCFF981LYA/@@download/ENCFF981LYA.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF466FKH bed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF010EFV, ENCFF113QYJ, ENCFF715ECN, ENCFF908SPX 6359345 ENCODE Processing Pipeline e526733c588254cd3be829b66378b329 https://www.encodeproject.org/files/ENCFF466FKH/@@download/ENCFF466FKH.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF736DIR bed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 ENCFF715ECN, ENCFF908SPX 2120096 ENCODE Processing Pipeline 4d7d5f59dce1094463f3c7aecc0244a5 https://www.encodeproject.org/files/ENCFF736DIR/@@download/ENCFF736DIR.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF181RSD bigBed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 2 ENCFF736DIR 4261459 ENCODE Processing Pipeline e27f9712ad1a56c553317a4270d0e535 https://www.encodeproject.org/files/ENCFF181RSD/@@download/ENCFF181RSD.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF425SZJ bigBed narrowPeak peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF466FKH 13410210 ENCODE Processing Pipeline 731b5fade8160b30f5de73cd19103140 https://www.encodeproject.org/files/ENCFF425SZJ/@@download/ENCFF425SZJ.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF531PVU bigBed narrowPeak conservative idr thresholded peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF319FBU 280240 ENCODE Processing Pipeline 4f9e25ed9bdef615dfe39d49046511d2 https://www.encodeproject.org/files/ENCFF531PVU/@@download/ENCFF531PVU.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF257QND bed narrowPeak optimal idr thresholded peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF157NWN, ENCFF419RSJ, ENCFF466FKH, ENCFF736DIR 209627 ENCODE Processing Pipeline aa623ac2ea9c3a9f84b6be83640ea8b0 https://www.encodeproject.org/files/ENCFF257QND/@@download/ENCFF257QND.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF319FBU bed narrowPeak conservative idr thresholded peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF157NWN, ENCFF419RSJ, ENCFF466FKH, ENCFF736DIR 114972 ENCODE Processing Pipeline a08941ab501bffa87e26fe67a9e96458 https://www.encodeproject.org/files/ENCFF319FBU/@@download/ENCFF319FBU.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF455EXR bigBed narrowPeak optimal idr thresholded peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF257QND 420193 ENCODE Processing Pipeline 25c47f6b2d2e28e31b321d020481f3a9 https://www.encodeproject.org/files/ENCFF455EXR/@@download/ENCFF455EXR.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF104RMI bigBed narrowPeak optimal idr thresholded peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF543UJL 380252 ENCODE Processing Pipeline 7af8e4fa2dcd82e0244ada7e39314195 https://www.encodeproject.org/files/ENCFF104RMI/@@download/ENCFF104RMI.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF543UJL bed narrowPeak optimal idr thresholded peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF628KQC, ENCFF636BWE, ENCFF682ZLL 181988 ENCODE Processing Pipeline d5d787e0e7925ce0d9da6e778090b957 https://www.encodeproject.org/files/ENCFF543UJL/@@download/ENCFF543UJL.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF335WSB bigBed narrowPeak conservative idr thresholded peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF870WOO 216451 ENCODE Processing Pipeline ae14f81cdc717574e02b37ba0dbb3f15 https://www.encodeproject.org/files/ENCFF335WSB/@@download/ENCFF335WSB.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF870WOO bed narrowPeak conservative idr thresholded peaks ENCSR445ACU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens SOX13-human ENCAB000BIR DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF628KQC, ENCFF636BWE, ENCFF682ZLL 104008 ENCODE Processing Pipeline 34bc8234ef31d548e5b55f8387ff1d44 https://www.encodeproject.org/files/ENCFF870WOO/@@download/ENCFF870WOO.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF000NCB bam alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NCL 1635936126 Richard Myers, HAIB b461995731afcf9affaee8caf9dd68cf https://www.encodeproject.org/files/ENCFF000NCB/@@download/ENCFF000NCB.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000NCC bam alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NCO 1670148692 Richard Myers, HAIB c77ec9cc829095faccd369965bf57d71 https://www.encodeproject.org/files/ENCFF000NCC/@@download/ENCFF000NCC.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000NCE bigWig raw signal ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 14680203 Richard Myers, HAIB 2229cf8dc767fa2906bcfce122e13467 https://www.encodeproject.org/files/ENCFF000NCE/@@download/ENCFF000NCE.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NCG bigWig raw signal ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 12741746 Richard Myers, HAIB eb7b88cf1183e9fa75d6bb6b06671e5d https://www.encodeproject.org/files/ENCFF000NCG/@@download/ENCFF000NCG.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NCL fastq reads ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1098196387 Richard Myers, HAIB b93ecb8f9a1fee4ef26d340eea341cef https://www.encodeproject.org/files/ENCFF000NCL/@@download/ENCFF000NCL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NFR/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000NCO fastq reads ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1128076619 Richard Myers, HAIB 0ee9ff81004bd06bf2f21b09c1fc017c https://www.encodeproject.org/files/ENCFF000NCO/@@download/ENCFF000NCO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NFR/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF440RZX bam alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCL, ENCFF643CGH 769502642 ENCODE Processing Pipeline a975a3e7b65a625b18fe5e83dc0ae753 https://www.encodeproject.org/files/ENCFF440RZX/@@download/ENCFF440RZX.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF959VOV bam unfiltered alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCL, ENCFF643CGH 1401063990 ENCODE Processing Pipeline a031f413a53c9a09c9054c933e5213fd https://www.encodeproject.org/files/ENCFF959VOV/@@download/ENCFF959VOV.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF058PCJ bam alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCO, ENCFF643CGH 777820312 ENCODE Processing Pipeline 4a190df25ed187b2792077edc686a035 https://www.encodeproject.org/files/ENCFF058PCJ/@@download/ENCFF058PCJ.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF623XBY bam unfiltered alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCO, ENCFF643CGH 1434587082 ENCODE Processing Pipeline db53408c0843e681abc6a0d702046aa1 https://www.encodeproject.org/files/ENCFF623XBY/@@download/ENCFF623XBY.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF175QYS bam unfiltered alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCL, ENCFF807MUK 1394420384 ENCODE Processing Pipeline a5a10dfe459304d532c0298b1066442c https://www.encodeproject.org/files/ENCFF175QYS/@@download/ENCFF175QYS.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF492RDK bam alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NCL, ENCFF807MUK 769555881 ENCODE Processing Pipeline d2ee4744b90bd41a0961e2c801a2acd0 https://www.encodeproject.org/files/ENCFF492RDK/@@download/ENCFF492RDK.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF200JDZ bam unfiltered alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCO, ENCFF807MUK 1427737400 ENCODE Processing Pipeline 952b5ac64218abd722fb08b86d0f9de0 https://www.encodeproject.org/files/ENCFF200JDZ/@@download/ENCFF200JDZ.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF675VLP bam alignments ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NCO, ENCFF807MUK 777949300 ENCODE Processing Pipeline c830f1c2cc4d36eba8097303c81db27b https://www.encodeproject.org/files/ENCFF675VLP/@@download/ENCFF675VLP.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF419GKM bigWig signal p-value ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF353UFN 316085157 ENCODE Processing Pipeline 88e72f8c7cdf7ad5cbaffbb3e7108545 https://www.encodeproject.org/files/ENCFF419GKM/@@download/ENCFF419GKM.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF314OJX bigWig signal p-value ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF353UFN, ENCFF440RZX 325932808 ENCODE Processing Pipeline 265dda3140084ee570e1d8a9665e2969 https://www.encodeproject.org/files/ENCFF314OJX/@@download/ENCFF314OJX.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF696TZN bigBed narrowPeak peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF704SNT 8008168 ENCODE Processing Pipeline c51bf2b3eb9245699713b30627c542d4 https://www.encodeproject.org/files/ENCFF696TZN/@@download/ENCFF696TZN.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF130NTT bigWig signal p-value ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF353UFN, ENCFF440RZX 320385292 ENCODE Processing Pipeline fedc84e924bd5867afa711030c7d7c9e https://www.encodeproject.org/files/ENCFF130NTT/@@download/ENCFF130NTT.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF515QJN bigWig fold change over control ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF353UFN 266999963 ENCODE Processing Pipeline c6770a9217db8da2f273277f6632abbd https://www.encodeproject.org/files/ENCFF515QJN/@@download/ENCFF515QJN.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF064BXP bed narrowPeak peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF058PCJ, ENCFF353UFN 3622543 ENCODE Processing Pipeline 5c6485486c0e4e576c32b2afcaa1dc29 https://www.encodeproject.org/files/ENCFF064BXP/@@download/ENCFF064BXP.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF706YAV bigBed narrowPeak peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF261BEX 10754830 ENCODE Processing Pipeline fc11132b95790319eba9655f06b3696e https://www.encodeproject.org/files/ENCFF706YAV/@@download/ENCFF706YAV.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF976REA bigWig fold change over control ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF353UFN, ENCFF440RZX 269223846 ENCODE Processing Pipeline 664b0cab3afb3ce38a4246cb2ab82497 https://www.encodeproject.org/files/ENCFF976REA/@@download/ENCFF976REA.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF704SNT bed narrowPeak peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF353UFN, ENCFF440RZX 3647125 ENCODE Processing Pipeline e90d1d90b5586cba7596ca81995c0690 https://www.encodeproject.org/files/ENCFF704SNT/@@download/ENCFF704SNT.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF132AXT bigWig fold change over control ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF353UFN, ENCFF440RZX 485433877 ENCODE Processing Pipeline 233c6699603c5a9d4ea42e9d2faa04b7 https://www.encodeproject.org/files/ENCFF132AXT/@@download/ENCFF132AXT.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF261BEX bed narrowPeak peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058PCJ, ENCFF353UFN, ENCFF440RZX 4214589 ENCODE Processing Pipeline 25199a5533d105e96fb90ca23f4582e2 https://www.encodeproject.org/files/ENCFF261BEX/@@download/ENCFF261BEX.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF828FPY bed narrowPeak conservative idr thresholded peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF064BXP, ENCFF261BEX, ENCFF419RSJ, ENCFF704SNT 11912 ENCODE Processing Pipeline ed514925fb5cbbbf0e865e59167b3f21 https://www.encodeproject.org/files/ENCFF828FPY/@@download/ENCFF828FPY.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF963CGV bed narrowPeak optimal idr thresholded peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF064BXP, ENCFF261BEX, ENCFF419RSJ, ENCFF704SNT 12184 ENCODE Processing Pipeline 311ab28102f33c2a85a469d7dde42bd8 https://www.encodeproject.org/files/ENCFF963CGV/@@download/ENCFF963CGV.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF562LQQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF963CGV 79705 ENCODE Processing Pipeline e06e7fecfd172323e4207eae0ea39502 https://www.encodeproject.org/files/ENCFF562LQQ/@@download/ENCFF562LQQ.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF817TSZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF828FPY 89723 ENCODE Processing Pipeline 93249f1fe465f572d1966ff00c6e897e https://www.encodeproject.org/files/ENCFF817TSZ/@@download/ENCFF817TSZ.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF072IIE bigBed narrowPeak peaks ENCSR000BIO ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF064BXP 8051877 ENCODE Processing Pipeline 865ebe2f411db36d51590378b72081a5 https://www.encodeproject.org/files/ENCFF072IIE/@@download/ENCFF072IIE.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF094UFQ fastq reads ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF120IAI 2935138422 Richard Myers, HAIB 615c61f2d54f7280449e71507142bcc4 SRA:SRR6214367 https://www.encodeproject.org/files/ENCFF094UFQ/@@download/ENCFF094UFQ.fastq.gz HiSeq 2000 /files/ENCFF942ZHL/ released antibody characterized with exemption ENCFF120IAI fastq reads ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF094UFQ 2862563179 Richard Myers, HAIB 4b71055519a9890c5be192a8f82aafef SRA:SRR6214367 https://www.encodeproject.org/files/ENCFF120IAI/@@download/ENCFF120IAI.fastq.gz HiSeq 2000 /files/ENCFF043BUS/ released antibody characterized with exemption ENCFF157OFR bam unfiltered alignments ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF094UFQ, ENCFF120IAI, ENCFF643CGH 6942603522 ENCODE Processing Pipeline 853a4a585b0fd0b07009ca7efc1413c4 https://www.encodeproject.org/files/ENCFF157OFR/@@download/ENCFF157OFR.bam GRCh38 released antibody characterized with exemption ENCFF216CSN bam unfiltered alignments ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF094UFQ, ENCFF120IAI, ENCFF807MUK 6907872897 ENCODE Processing Pipeline 2dc26d0cc6221868aca6560a9c1cd902 https://www.encodeproject.org/files/ENCFF216CSN/@@download/ENCFF216CSN.bam hg19 released antibody characterized with exemption ENCFF198YBT bam alignments ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF094UFQ, ENCFF120IAI, ENCFF643CGH 5376078401 ENCODE Processing Pipeline 86d4a250141e1bfb2d3d6372bc644a02 https://www.encodeproject.org/files/ENCFF198YBT/@@download/ENCFF198YBT.bam GRCh38 released antibody characterized with exemption ENCFF012SRD bam alignments ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF094UFQ, ENCFF120IAI, ENCFF807MUK 5369163674 ENCODE Processing Pipeline 6933ba0c577230328430a95145f3f347 https://www.encodeproject.org/files/ENCFF012SRD/@@download/ENCFF012SRD.bam hg19 released antibody characterized with exemption ENCFF844FTL bigWig signal p-value ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF012SRD 1666013359 ENCODE Processing Pipeline 68e73caafce283db154d2fc907af7a05 https://www.encodeproject.org/files/ENCFF844FTL/@@download/ENCFF844FTL.bigWig hg19 released antibody characterized with exemption ENCFF590CTW bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF060OVF 56002 ENCODE Processing Pipeline 458b178b18b0280ab9ead1d37d0b6cde https://www.encodeproject.org/files/ENCFF590CTW/@@download/ENCFF590CTW.bigBed hg19 released antibody characterized with exemption ENCFF412GSO bigWig fold change over control ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF012SRD 1747578480 ENCODE Processing Pipeline 4356e89c1d0a766adcf1a0255ffed32e https://www.encodeproject.org/files/ENCFF412GSO/@@download/ENCFF412GSO.bigWig hg19 released antibody characterized with exemption ENCFF060OVF bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF073TAO 1004 ENCODE Processing Pipeline 666bc9286215cb4e255245428868a477 https://www.encodeproject.org/files/ENCFF060OVF/@@download/ENCFF060OVF.bed.gz hg19 released antibody characterized with exemption ENCFF073TAO bed narrowPeak peaks ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF012SRD 5908314 ENCODE Processing Pipeline 9f48faafd5fc62fa7eb8cb62d40b4acb https://www.encodeproject.org/files/ENCFF073TAO/@@download/ENCFF073TAO.bed.gz hg19 released antibody characterized with exemption ENCFF320PPP bigBed narrowPeak peaks ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF073TAO 11944762 ENCODE Processing Pipeline ef17a6d2478fc31257668c1f0537940d https://www.encodeproject.org/files/ENCFF320PPP/@@download/ENCFF320PPP.bigBed hg19 released antibody characterized with exemption ENCFF347PIT bigWig fold change over control ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF198YBT 1751608944 ENCODE Processing Pipeline 03154e4a251d73431eeb4f037d5c3c60 https://www.encodeproject.org/files/ENCFF347PIT/@@download/ENCFF347PIT.bigWig GRCh38 released antibody characterized with exemption ENCFF116PSC bed narrowPeak peaks ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF198YBT 5915013 ENCODE Processing Pipeline d08c5faf3c2bbc90290fabfb46faa8e4 https://www.encodeproject.org/files/ENCFF116PSC/@@download/ENCFF116PSC.bed.gz GRCh38 released antibody characterized with exemption ENCFF629KEI bigWig signal p-value ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF198YBT 1663240319 ENCODE Processing Pipeline a8a829b716dfa2cded5efdd4c2f5022e https://www.encodeproject.org/files/ENCFF629KEI/@@download/ENCFF629KEI.bigWig GRCh38 released antibody characterized with exemption ENCFF454DZP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF116PSC, ENCFF419RSJ 1279 ENCODE Processing Pipeline dfea2bb813ca3658e0e36bc719fc8afa https://www.encodeproject.org/files/ENCFF454DZP/@@download/ENCFF454DZP.bed.gz GRCh38 released antibody characterized with exemption ENCFF245VDD bigBed narrowPeak peaks ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF116PSC 11967764 ENCODE Processing Pipeline b7ebd737f57fa881e83cfbf6d3d580e0 https://www.encodeproject.org/files/ENCFF245VDD/@@download/ENCFF245VDD.bigBed GRCh38 released antibody characterized with exemption ENCFF361FWA bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR779NON ChIP-seq UBERON:0010414 omental fat pad tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF454DZP 17694 ENCODE Processing Pipeline 972b94eaf0ebcec11bf3303fd9f0e415 https://www.encodeproject.org/files/ENCFF361FWA/@@download/ENCFF361FWA.bigBed GRCh38 released antibody characterized with exemption ENCFF000PVN bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PWC 1240281330 Richard Myers, HAIB b0716bd81170efe1fd0a8e411fb669d8 https://www.encodeproject.org/files/ENCFF000PVN/@@download/ENCFF000PVN.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PVO bigBed broadPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UIW 302804 Richard Myers, HAIB 86ed02350d76fe7b223e6928fbdb3912 https://www.encodeproject.org/files/ENCFF000PVO/@@download/ENCFF000PVO.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PVQ bigBed broadPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UIY 448130 Richard Myers, HAIB f5fb7ff9e1ec4cab381400a170232012 https://www.encodeproject.org/files/ENCFF000PVQ/@@download/ENCFF000PVQ.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PVR bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PWA 973300680 Richard Myers, HAIB 56ab039797ad4b71211e211ebc837ae0 https://www.encodeproject.org/files/ENCFF000PVR/@@download/ENCFF000PVR.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PVS bigWig raw signal ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 18255912 Richard Myers, HAIB fb3b9dc8e85636a3a1226d22f8c1dbec https://www.encodeproject.org/files/ENCFF000PVS/@@download/ENCFF000PVS.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000PVU bigWig raw signal ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 21800354 Richard Myers, HAIB 4ac1cd7306a68743492173e12c2c827e https://www.encodeproject.org/files/ENCFF000PVU/@@download/ENCFF000PVU.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000PWA fastq reads ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 969133678 Richard Myers, HAIB 086560bad3ea9a7d18174a8eaa67fc4e https://www.encodeproject.org/files/ENCFF000PWA/@@download/ENCFF000PWA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PWC fastq reads ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1119632052 Richard Myers, HAIB 42dd51a08ec18fc8f911366cebab1cd8 https://www.encodeproject.org/files/ENCFF000PWC/@@download/ENCFF000PWC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF001UIW bed broadPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 177639 Richard Myers, HAIB 6e8f85d3ab428ef95e3382237b1b2419 https://www.encodeproject.org/files/ENCFF001UIW/@@download/ENCFF001UIW.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF001UIY bed broadPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 218408 Richard Myers, HAIB f8be948c85a0facd73902d03412464c0 https://www.encodeproject.org/files/ENCFF001UIY/@@download/ENCFF001UIY.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CLN bed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 312249 ENCODE Consortium Analysis Working Group d1af167591078c356c4ff1f625297619 https://www.encodeproject.org/files/ENCFF002CLN/@@download/ENCFF002CLN.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF968XJD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE ENCFF002CLN 622854 ENCODE Consortium 780afa7d0324a4b3680a92a240e56202 https://www.encodeproject.org/files/ENCFF968XJD/@@download/ENCFF968XJD.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF917RFP bam unfiltered alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWA, ENCFF643CGH 1152325423 ENCODE Processing Pipeline 9ada609b03b7810758b863901298df22 https://www.encodeproject.org/files/ENCFF917RFP/@@download/ENCFF917RFP.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF438DHS bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWA, ENCFF643CGH 612365247 ENCODE Processing Pipeline eed32ba312b25c9564c5e5f9d0d4d3d1 https://www.encodeproject.org/files/ENCFF438DHS/@@download/ENCFF438DHS.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF308RGN bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWC, ENCFF643CGH 914277873 ENCODE Processing Pipeline 2130fc207690f965c7a70e73e6ee2d25 https://www.encodeproject.org/files/ENCFF308RGN/@@download/ENCFF308RGN.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF005MDO bam unfiltered alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWC, ENCFF643CGH 1510432253 ENCODE Processing Pipeline 4822bd73719d863c15ad918833679a8e https://www.encodeproject.org/files/ENCFF005MDO/@@download/ENCFF005MDO.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF727DWE bam unfiltered alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWA, ENCFF807MUK 1150169255 ENCODE Processing Pipeline 4ebd526a66f2a7eafea475cbe1ea74a2 https://www.encodeproject.org/files/ENCFF727DWE/@@download/ENCFF727DWE.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF849WYX bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWA, ENCFF807MUK 612766004 ENCODE Processing Pipeline 2026e3ba49cd1962705f2941d8b9f7a5 https://www.encodeproject.org/files/ENCFF849WYX/@@download/ENCFF849WYX.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF501RLG bam unfiltered alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWC, ENCFF807MUK 1507713767 ENCODE Processing Pipeline 1ab19b47462c39f6de0662e520f828c9 https://www.encodeproject.org/files/ENCFF501RLG/@@download/ENCFF501RLG.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF747HGM bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWC, ENCFF807MUK 914786444 ENCODE Processing Pipeline 65d015a573436527cfbb02c83685506f https://www.encodeproject.org/files/ENCFF747HGM/@@download/ENCFF747HGM.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF281HBB bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438DHS, ENCFF772PJM 214904341 ENCODE Processing Pipeline 65b58222adc956d921614e5e4b089004 https://www.encodeproject.org/files/ENCFF281HBB/@@download/ENCFF281HBB.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF932PBI bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308RGN, ENCFF772PJM 201969144 ENCODE Processing Pipeline e32b421c586c1eb836f5cd2d7f62c0a5 https://www.encodeproject.org/files/ENCFF932PBI/@@download/ENCFF932PBI.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF507KDS bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308RGN, ENCFF438DHS, ENCFF772PJM 186713116 ENCODE Processing Pipeline 3663075a3824d5e632c1dcd0a08f9442 https://www.encodeproject.org/files/ENCFF507KDS/@@download/ENCFF507KDS.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF862YKN bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308RGN, ENCFF772PJM 320179376 ENCODE Processing Pipeline c8aa2dc15a0c63341fee2e926c07c61f https://www.encodeproject.org/files/ENCFF862YKN/@@download/ENCFF862YKN.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF102FPL bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438DHS, ENCFF772PJM 244670503 ENCODE Processing Pipeline eab076b1f60c537497cb1aa055b74cfd https://www.encodeproject.org/files/ENCFF102FPL/@@download/ENCFF102FPL.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF550IIR bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF980RKS 10239110 ENCODE Processing Pipeline 7fff50c28712d161e380b55bd2b05568 https://www.encodeproject.org/files/ENCFF550IIR/@@download/ENCFF550IIR.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF011BTB bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF145FYQ 2045757 ENCODE Processing Pipeline bbdd2ffe220c5da0b7f42c58823ca279 https://www.encodeproject.org/files/ENCFF011BTB/@@download/ENCFF011BTB.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF650KQD bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308RGN, ENCFF438DHS, ENCFF772PJM 5153728 ENCODE Processing Pipeline 7f5b53d2cccfd07ff26ce65cdd16f86a https://www.encodeproject.org/files/ENCFF650KQD/@@download/ENCFF650KQD.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF980RKS bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308RGN, ENCFF772PJM 4304832 ENCODE Processing Pipeline 3801d07b163dae30363e2fb2af8a73e3 https://www.encodeproject.org/files/ENCFF980RKS/@@download/ENCFF980RKS.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF364WAT bed narrowPeak conservative idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF145FYQ, ENCFF419RSJ, ENCFF650KQD, ENCFF980RKS 7082 ENCODE Processing Pipeline 43434f95dab24f3f53d2e33b299e6116 https://www.encodeproject.org/files/ENCFF364WAT/@@download/ENCFF364WAT.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF619WVY bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308RGN, ENCFF438DHS, ENCFF772PJM 504874826 ENCODE Processing Pipeline 64d97b0b6b4857ae7eeef4e2d0905518 https://www.encodeproject.org/files/ENCFF619WVY/@@download/ENCFF619WVY.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF145FYQ bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438DHS, ENCFF772PJM 934563 ENCODE Processing Pipeline a1f72cc6c4bbbf5378d73c25d6760d80 https://www.encodeproject.org/files/ENCFF145FYQ/@@download/ENCFF145FYQ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF615EDN bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF650KQD 10795762 ENCODE Processing Pipeline f442d97bb4900568a2eff163084248e4 https://www.encodeproject.org/files/ENCFF615EDN/@@download/ENCFF615EDN.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF467WOR bed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF145FYQ, ENCFF419RSJ, ENCFF650KQD, ENCFF980RKS 131560 ENCODE Processing Pipeline 0eea4ec13ed728c59950c45219d7f880 https://www.encodeproject.org/files/ENCFF467WOR/@@download/ENCFF467WOR.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF787GVU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF467WOR 250881 ENCODE Processing Pipeline 2bf30aae32668b231ba6d4efaf8a745a https://www.encodeproject.org/files/ENCFF787GVU/@@download/ENCFF787GVU.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF472AQO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF364WAT 46544 ENCODE Processing Pipeline b93a4e3bc08fa7f030af9dc71d7e068c https://www.encodeproject.org/files/ENCFF472AQO/@@download/ENCFF472AQO.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF498JVT fastq reads ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 1 50 single-ended 964805267 Richard Myers, HAIB 34b7c6c1338fe06accddec15b4f91fb4 SRA:SRR5338921 https://www.encodeproject.org/files/ENCFF498JVT/@@download/ENCFF498JVT.fastq.gz HiSeq 2000 /files/ENCFF484RXR/ released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF886ZJD fastq reads ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1090252711 Richard Myers, HAIB a9c65227f1b7cad97ed5807981c10242 SRA:SRR5338920 https://www.encodeproject.org/files/ENCFF886ZJD/@@download/ENCFF886ZJD.fastq.gz HiSeq 2000 /files/ENCFF252PYF/ released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF741SOH bam alignments ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 50 ENCFF498JVT, ENCFF807MUK 890606242 ENCODE Processing Pipeline 4c66cdefb12464f94d3a0e7cbfa13812 https://www.encodeproject.org/files/ENCFF741SOH/@@download/ENCFF741SOH.bam hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF692CCY bam alignments ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 50 ENCFF807MUK, ENCFF886ZJD 985434500 ENCODE Processing Pipeline a238607924d97be566772e53da342b74 https://www.encodeproject.org/files/ENCFF692CCY/@@download/ENCFF692CCY.bam hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF850BKZ bigWig signal p-value ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 ENCFF017YFK, ENCFF741SOH 620954330 ENCODE Processing Pipeline e6ce95a7fe0c29853fefaebaa775c338 https://www.encodeproject.org/files/ENCFF850BKZ/@@download/ENCFF850BKZ.bigWig hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF461EAP bigWig signal p-value ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF017YFK, ENCFF692CCY, ENCFF741SOH, ENCFF956QBZ 874891329 ENCODE Processing Pipeline 2895e7ad706e093c6f95d7b2c911f196 https://www.encodeproject.org/files/ENCFF461EAP/@@download/ENCFF461EAP.bigWig hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF559KKI bigWig fold change over control ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 ENCFF017YFK, ENCFF741SOH 406803008 ENCODE Processing Pipeline 96a4a21be5c7d6b60d47b8a0f67627bc https://www.encodeproject.org/files/ENCFF559KKI/@@download/ENCFF559KKI.bigWig hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF322MJZ bigWig signal p-value ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 ENCFF017YFK, ENCFF692CCY, ENCFF956QBZ 833115230 ENCODE Processing Pipeline 327d3e634d9bee95423473a3d7d5b108 https://www.encodeproject.org/files/ENCFF322MJZ/@@download/ENCFF322MJZ.bigWig hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF703BCY bigWig fold change over control ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 ENCFF017YFK, ENCFF692CCY, ENCFF956QBZ 574038238 ENCODE Processing Pipeline 8664c6fdea6fc0d5d07026feb5a5be16 https://www.encodeproject.org/files/ENCFF703BCY/@@download/ENCFF703BCY.bigWig hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF879HCW bed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 ENCFF017YFK, ENCFF692CCY, ENCFF956QBZ 5733069 ENCODE Processing Pipeline 76186825d37383865e921606496f6b6b https://www.encodeproject.org/files/ENCFF879HCW/@@download/ENCFF879HCW.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF856AFV bed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF017YFK, ENCFF692CCY, ENCFF741SOH, ENCFF956QBZ 6472006 ENCODE Processing Pipeline 882cfb8d3684a538469008b07df480d9 https://www.encodeproject.org/files/ENCFF856AFV/@@download/ENCFF856AFV.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF903YWQ bigWig fold change over control ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF017YFK, ENCFF692CCY, ENCFF741SOH, ENCFF956QBZ 941225788 ENCODE Processing Pipeline cd87ee16569430fca7210651a441a8fc https://www.encodeproject.org/files/ENCFF903YWQ/@@download/ENCFF903YWQ.bigWig hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF435AEO bed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 ENCFF017YFK, ENCFF741SOH 5249954 ENCODE Processing Pipeline e190fb27271ab2eb4a9202de6945a305 https://www.encodeproject.org/files/ENCFF435AEO/@@download/ENCFF435AEO.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF895PYE bigBed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 ENCFF435AEO 11223714 ENCODE Processing Pipeline c6d9a0fce9c2dae756b12870945fba8b https://www.encodeproject.org/files/ENCFF895PYE/@@download/ENCFF895PYE.bigBed hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF375CGR bigBed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 ENCFF879HCW 11428590 ENCODE Processing Pipeline e646cd5ee4e1139d5bfbe94133e68c68 https://www.encodeproject.org/files/ENCFF375CGR/@@download/ENCFF375CGR.bigBed hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF601SVQ bigBed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF856AFV 13641085 ENCODE Processing Pipeline b9580ee2d22c101c7e32a77cb3b3bacd https://www.encodeproject.org/files/ENCFF601SVQ/@@download/ENCFF601SVQ.bigBed hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF263RQB bam unfiltered alignments ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 50 ENCFF498JVT, ENCFF643CGH 1111285494 ENCODE Processing Pipeline d191dfef3cff1ecbad913c8ae4d0d865 https://www.encodeproject.org/files/ENCFF263RQB/@@download/ENCFF263RQB.bam GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF338SEN bam unfiltered alignments ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF886ZJD 1249928481 ENCODE Processing Pipeline 1a865d4512e200756cbce1745b86cf2f https://www.encodeproject.org/files/ENCFF338SEN/@@download/ENCFF338SEN.bam GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF938DPX bam alignments ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 50 ENCFF498JVT, ENCFF643CGH 890518029 ENCODE Processing Pipeline d4864480d858ed7109066b5cf67669ac https://www.encodeproject.org/files/ENCFF938DPX/@@download/ENCFF938DPX.bam GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF200FYK bam alignments ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF886ZJD 985329243 ENCODE Processing Pipeline 59ce5010609c5f3bda97e3d7746755df https://www.encodeproject.org/files/ENCFF200FYK/@@download/ENCFF200FYK.bam GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF695VON bigWig signal p-value ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 ENCFF938DPX 460004244 ENCODE Processing Pipeline 25bd621823e0ad54b6847a4d580aaac4 https://www.encodeproject.org/files/ENCFF695VON/@@download/ENCFF695VON.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF375YLO bigWig signal p-value ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 ENCFF200FYK 728603038 ENCODE Processing Pipeline d2b4f387da7e48f1e395d50aad21241f https://www.encodeproject.org/files/ENCFF375YLO/@@download/ENCFF375YLO.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF988QQS bigWig fold change over control ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 ENCFF938DPX 427646034 ENCODE Processing Pipeline b47e6f926774b877c7a59bbb2051d72b https://www.encodeproject.org/files/ENCFF988QQS/@@download/ENCFF988QQS.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF541EBS bigWig signal p-value ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF200FYK, ENCFF938DPX 994651994 ENCODE Processing Pipeline b3b0983eb48bb7684889084ea4771a1e https://www.encodeproject.org/files/ENCFF541EBS/@@download/ENCFF541EBS.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF475XYA bigWig fold change over control ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 ENCFF200FYK 576312380 ENCODE Processing Pipeline df0cd6a1a983325d720963e2e2d4cb41 https://www.encodeproject.org/files/ENCFF475XYA/@@download/ENCFF475XYA.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF835WYM bigWig fold change over control ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF200FYK, ENCFF938DPX 919861019 ENCODE Processing Pipeline fc2af8d6b7c4c59bda01cef15f7f9661 https://www.encodeproject.org/files/ENCFF835WYM/@@download/ENCFF835WYM.bigWig GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF986ZDJ bed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF200FYK, ENCFF938DPX 6284968 ENCODE Processing Pipeline 4b0b0d27b57b114d1cc0466dc05e9027 https://www.encodeproject.org/files/ENCFF986ZDJ/@@download/ENCFF986ZDJ.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF483SDU bed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 ENCFF938DPX 4996755 ENCODE Processing Pipeline 787e4ff73fd88e798246c773c52e8f2e https://www.encodeproject.org/files/ENCFF483SDU/@@download/ENCFF483SDU.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF405LID bed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 ENCFF200FYK 5532250 ENCODE Processing Pipeline 700bf9cc4fb5d064702bb358741e1deb https://www.encodeproject.org/files/ENCFF405LID/@@download/ENCFF405LID.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF206WVH bigBed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1 ENCFF483SDU 11130157 ENCODE Processing Pipeline b1dc8e89105b72feb20d8af21804bb16 https://www.encodeproject.org/files/ENCFF206WVH/@@download/ENCFF206WVH.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF540PIU bigBed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF986ZDJ 13635570 ENCODE Processing Pipeline 96a529ab9fa95db0cb7fc896bac5ac70 https://www.encodeproject.org/files/ENCFF540PIU/@@download/ENCFF540PIU.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF151YWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF511AZU 379743 ENCODE Processing Pipeline 0850bc7c03d11a68130cb35d3c70b8f7 https://www.encodeproject.org/files/ENCFF151YWJ/@@download/ENCFF151YWJ.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF354YAK bigBed narrowPeak peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 2 ENCFF405LID 11388190 ENCODE Processing Pipeline 6147630fd990bf437b060bcb43d56c08 https://www.encodeproject.org/files/ENCFF354YAK/@@download/ENCFF354YAK.bigBed GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF511AZU bed narrowPeak optimal idr thresholded peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF405LID, ENCFF419RSJ, ENCFF483SDU, ENCFF986ZDJ 181390 ENCODE Processing Pipeline f370110454ab3734ece21af99e224a47 https://www.encodeproject.org/files/ENCFF511AZU/@@download/ENCFF511AZU.bed.gz GRCh38 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF980XXN bigBed narrowPeak optimal idr thresholded peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF794MHJ 276811 ENCODE Processing Pipeline b6a73ccd4e4336474b0b501eb1d303ba https://www.encodeproject.org/files/ENCFF980XXN/@@download/ENCFF980XXN.bigBed hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF430DLC bigBed narrowPeak conservative idr thresholded peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF158WQY 269766 ENCODE Processing Pipeline 8edaf8e232c8c9fe788304dfd76238b3 https://www.encodeproject.org/files/ENCFF430DLC/@@download/ENCFF430DLC.bigBed hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF158WQY bed narrowPeak conservative idr thresholded peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF435AEO, ENCFF856AFV, ENCFF879HCW 146551 ENCODE Processing Pipeline b1fdd7e62ea46ba0845c35304b537a96 https://www.encodeproject.org/files/ENCFF158WQY/@@download/ENCFF158WQY.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF794MHJ bed narrowPeak optimal idr thresholded peaks ENCSR534VHI ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens ETS1-human ENCAB000AGG DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF435AEO, ENCFF856AFV, ENCFF879HCW 152698 ENCODE Processing Pipeline 28bd1c40b861835abf7bdeae27518a7e https://www.encodeproject.org/files/ENCFF794MHJ/@@download/ENCFF794MHJ.bed.gz hg19 released borderline replicate concordance missing unfiltered alignments partially characterized antibody ENCFF000PHX bam alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PIJ 851199021 Richard Myers, HAIB 93d6c9b1bb7cc6d837c782651da6f823 https://www.encodeproject.org/files/ENCFF000PHX/@@download/ENCFF000PHX.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PHZ bigBed broadPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFW 1560782 Richard Myers, HAIB 61784a37ae157ed383af28d037905c73 https://www.encodeproject.org/files/ENCFF000PHZ/@@download/ENCFF000PHZ.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PIA bigBed broadPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFX 966927 Richard Myers, HAIB b6ffafdbc09d496d92d40c08ecb320ef https://www.encodeproject.org/files/ENCFF000PIA/@@download/ENCFF000PIA.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PIC bam alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PIM 817485499 Richard Myers, HAIB 58bf000b6aa55e2e1ec1edaa08051ef2 https://www.encodeproject.org/files/ENCFF000PIC/@@download/ENCFF000PIC.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PID bigWig raw signal ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 1 52533660 Richard Myers, HAIB c11c604bbf7f432cfc0a18848ab09a07 https://www.encodeproject.org/files/ENCFF000PID/@@download/ENCFF000PID.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PIF bigWig raw signal ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 1 29603388 Richard Myers, HAIB 334145c8a9b4064d6657b2d0e73740c0 https://www.encodeproject.org/files/ENCFF000PIF/@@download/ENCFF000PIF.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PIJ fastq reads ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 757517270 Richard Myers, HAIB 1c80a776fbc16e0283e8fbf3bfdefd21 https://www.encodeproject.org/files/ENCFF000PIJ/@@download/ENCFF000PIJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PIM fastq reads ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 767574444 Richard Myers, HAIB 3b08c940989c0214218baf15ea61459c https://www.encodeproject.org/files/ENCFF000PIM/@@download/ENCFF000PIM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UFW bed broadPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 1 839915 Richard Myers, HAIB f8f6f9029d38a8ce2579c5a516559fd5 https://www.encodeproject.org/files/ENCFF001UFW/@@download/ENCFF001UFW.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UFX bed broadPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 1 633974 Richard Myers, HAIB ebd770057f27a31e70d68896489b398d https://www.encodeproject.org/files/ENCFF001UFX/@@download/ENCFF001UFX.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CKJ bed narrowPeak optimal idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1014435 ENCODE Consortium Analysis Working Group 615ea488dc54abb647c6e7d6aaa1a14d https://www.encodeproject.org/files/ENCFF002CKJ/@@download/ENCFF002CKJ.bed.gz hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF869JXO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE ENCFF002CKJ 2047375 ENCODE Consortium 530c7366d1c49eca4ac2e57e9d1f7d7c https://www.encodeproject.org/files/ENCFF869JXO/@@download/ENCFF869JXO.bigBed hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF952XAL bam unfiltered alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PIM, ENCFF643CGH 971775956 ENCODE Processing Pipeline 760d08ad71ed963df78bec1b1f08e06c https://www.encodeproject.org/files/ENCFF952XAL/@@download/ENCFF952XAL.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF172IMH bam alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PIM, ENCFF643CGH 497461256 ENCODE Processing Pipeline 4683fa852724476f7680733a22327f9e https://www.encodeproject.org/files/ENCFF172IMH/@@download/ENCFF172IMH.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF567DDU bam unfiltered alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIJ, ENCFF643CGH 1014182632 ENCODE Processing Pipeline f22ddacaeab7252e80e77d23926ef7ab https://www.encodeproject.org/files/ENCFF567DDU/@@download/ENCFF567DDU.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF563UBP bam alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIJ, ENCFF643CGH 621267194 ENCODE Processing Pipeline f3b8af2b05bb95480cc463816f279cb9 https://www.encodeproject.org/files/ENCFF563UBP/@@download/ENCFF563UBP.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF210TQG bam unfiltered alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PIM, ENCFF807MUK 968772939 ENCODE Processing Pipeline e5f744bcca2bb0208b3ac46ce843ed46 https://www.encodeproject.org/files/ENCFF210TQG/@@download/ENCFF210TQG.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF994UGO bam alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PIM, ENCFF807MUK 497686506 ENCODE Processing Pipeline a0b1d98420a49411e560f62fe856f36c https://www.encodeproject.org/files/ENCFF994UGO/@@download/ENCFF994UGO.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF579JDB bam unfiltered alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIJ, ENCFF807MUK 1011793686 ENCODE Processing Pipeline 65160cb503d9e7e2b1b65678fa58f28c https://www.encodeproject.org/files/ENCFF579JDB/@@download/ENCFF579JDB.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF074KQO bam alignments ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIJ, ENCFF807MUK 621446426 ENCODE Processing Pipeline 8ddbbfbbe3d273aebde5c5a412228ad6 https://www.encodeproject.org/files/ENCFF074KQO/@@download/ENCFF074KQO.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF812TXA bigWig signal p-value ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF172IMH, ENCFF285LVE, ENCFF943DZB 576149642 ENCODE Processing Pipeline 903c4426a06f8691b7cb119442d12861 https://www.encodeproject.org/files/ENCFF812TXA/@@download/ENCFF812TXA.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF900NPG bigWig signal p-value ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF563UBP, ENCFF943DZB 607742198 ENCODE Processing Pipeline 6e74753f7c1d84bf9c6753dd64c1be80 https://www.encodeproject.org/files/ENCFF900NPG/@@download/ENCFF900NPG.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF887PSF bigWig signal p-value ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF172IMH, ENCFF285LVE, ENCFF563UBP, ENCFF943DZB 836759456 ENCODE Processing Pipeline 2d3a783dd7e289e1c90258cd73d660ff https://www.encodeproject.org/files/ENCFF887PSF/@@download/ENCFF887PSF.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF213LYJ bigWig fold change over control ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF563UBP, ENCFF943DZB 454101039 ENCODE Processing Pipeline f07883f99969ec59e52448cb9e21c4f2 https://www.encodeproject.org/files/ENCFF213LYJ/@@download/ENCFF213LYJ.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF050QFU bigWig fold change over control ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF172IMH, ENCFF285LVE, ENCFF943DZB 371670807 ENCODE Processing Pipeline bdf5ca9f8e608c3e90ccb7121d96d158 https://www.encodeproject.org/files/ENCFF050QFU/@@download/ENCFF050QFU.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF636MYA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF872MGU 1443900 ENCODE Processing Pipeline 28c514d993650eb1c7256056a140c373 https://www.encodeproject.org/files/ENCFF636MYA/@@download/ENCFF636MYA.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF529CBU bigWig fold change over control ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF172IMH, ENCFF285LVE, ENCFF563UBP, ENCFF943DZB 678229240 ENCODE Processing Pipeline b9ada3e4f990680da1268617b536c0aa https://www.encodeproject.org/files/ENCFF529CBU/@@download/ENCFF529CBU.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF713IOU bed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF563UBP, ENCFF943DZB 5554467 ENCODE Processing Pipeline aa1bb48c521eec8e158aed015e1ab1ae https://www.encodeproject.org/files/ENCFF713IOU/@@download/ENCFF713IOU.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF687AWV bed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF172IMH, ENCFF285LVE, ENCFF943DZB 5217399 ENCODE Processing Pipeline 9c6901d7c1f66746d76771d57cab6ec2 https://www.encodeproject.org/files/ENCFF687AWV/@@download/ENCFF687AWV.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF619QTJ bigBed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF830SFZ 11414514 ENCODE Processing Pipeline dd031ee877e9c40a56e562162d2a6a2e https://www.encodeproject.org/files/ENCFF619QTJ/@@download/ENCFF619QTJ.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF704DSK bed narrowPeak conservative idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF687AWV, ENCFF713IOU, ENCFF830SFZ 772494 ENCODE Processing Pipeline ad2940684d83678e16912cd0bb8ad474 https://www.encodeproject.org/files/ENCFF704DSK/@@download/ENCFF704DSK.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF830SFZ bed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF172IMH, ENCFF285LVE, ENCFF563UBP, ENCFF943DZB 6013575 ENCODE Processing Pipeline 8af9e5affd4ba91e71120e28d9c3a820 https://www.encodeproject.org/files/ENCFF830SFZ/@@download/ENCFF830SFZ.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF872MGU bed narrowPeak optimal idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF687AWV, ENCFF713IOU, ENCFF830SFZ 897502 ENCODE Processing Pipeline 4b11b20ee585560d2d465e093d977c27 https://www.encodeproject.org/files/ENCFF872MGU/@@download/ENCFF872MGU.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF299DXP bigBed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF713IOU 11252485 ENCODE Processing Pipeline 306d7a5ccfc23074627556632e6ece8b https://www.encodeproject.org/files/ENCFF299DXP/@@download/ENCFF299DXP.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF072HZX bigBed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF687AWV 11109425 ENCODE Processing Pipeline 35586e5e18bf6648621e16b0f40e5ae6 https://www.encodeproject.org/files/ENCFF072HZX/@@download/ENCFF072HZX.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF268EWJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF704DSK 1287658 ENCODE Processing Pipeline 249ae8962a3bf1045c560ce897b13a7e https://www.encodeproject.org/files/ENCFF268EWJ/@@download/ENCFF268EWJ.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF858ZUJ bigWig signal p-value ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF074KQO, ENCFF334MOO, ENCFF346RZT 584773125 ENCODE Processing Pipeline e079dfef4b50536407bd6e14ddc177f0 https://www.encodeproject.org/files/ENCFF858ZUJ/@@download/ENCFF858ZUJ.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF339OAE bigWig signal p-value ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF994UGO 617505013 ENCODE Processing Pipeline a5993283a3a01f82b31c22c013841464 https://www.encodeproject.org/files/ENCFF339OAE/@@download/ENCFF339OAE.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF604OMP bigWig fold change over control ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF074KQO, ENCFF334MOO, ENCFF346RZT 454526821 ENCODE Processing Pipeline 5efb549b1df317978d274f6f9945353c https://www.encodeproject.org/files/ENCFF604OMP/@@download/ENCFF604OMP.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF898FCL bigWig signal p-value ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF074KQO, ENCFF334MOO, ENCFF346RZT, ENCFF994UGO 801532196 ENCODE Processing Pipeline 5397cc846d291dd0869525e24e4a2fd5 https://www.encodeproject.org/files/ENCFF898FCL/@@download/ENCFF898FCL.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF157CCV bed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF074KQO, ENCFF334MOO, ENCFF346RZT 5711586 ENCODE Processing Pipeline 59d72d95c35bacf00f7f0b1a0cdfb2d7 https://www.encodeproject.org/files/ENCFF157CCV/@@download/ENCFF157CCV.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF800ENQ bigBed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF157CCV 11443996 ENCODE Processing Pipeline 103450627d8645be53b4b86011973228 https://www.encodeproject.org/files/ENCFF800ENQ/@@download/ENCFF800ENQ.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF786ABA bigWig fold change over control ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF994UGO 371695275 ENCODE Processing Pipeline f02d102423714e680b5f966135dbd880 https://www.encodeproject.org/files/ENCFF786ABA/@@download/ENCFF786ABA.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF169DCU bed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF994UGO 5219355 ENCODE Processing Pipeline f8f9e17f6114336d07e507400998d026 https://www.encodeproject.org/files/ENCFF169DCU/@@download/ENCFF169DCU.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF167FCK bigBed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF169DCU 11106028 ENCODE Processing Pipeline 7606ba69ed98a8f13c45c473ae581ab8 https://www.encodeproject.org/files/ENCFF167FCK/@@download/ENCFF167FCK.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF723HNL bigWig fold change over control ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF074KQO, ENCFF334MOO, ENCFF346RZT, ENCFF994UGO 679134531 ENCODE Processing Pipeline c1e59cee2490d6198ecf1cd88e4d6dea https://www.encodeproject.org/files/ENCFF723HNL/@@download/ENCFF723HNL.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF245NLP bed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF074KQO, ENCFF334MOO, ENCFF346RZT, ENCFF994UGO 6141612 ENCODE Processing Pipeline 1d59dc69718c3e2b8eab8bc23a64ea5a https://www.encodeproject.org/files/ENCFF245NLP/@@download/ENCFF245NLP.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF724MHH bigBed narrowPeak peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF245NLP 11572414 ENCODE Processing Pipeline cdd961c094e1372aa8af47aeb09f8f4f https://www.encodeproject.org/files/ENCFF724MHH/@@download/ENCFF724MHH.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF722GFS bed narrowPeak conservative idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF157CCV, ENCFF169DCU, ENCFF245NLP 789612 ENCODE Processing Pipeline 38a397c26a4bb6b305e286109c4d35a4 https://www.encodeproject.org/files/ENCFF722GFS/@@download/ENCFF722GFS.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF894NYR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF553PWA 1497621 ENCODE Processing Pipeline fccbee09c5e89919c01cccfdbae31376 https://www.encodeproject.org/files/ENCFF894NYR/@@download/ENCFF894NYR.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF506PCG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF722GFS 1321795 ENCODE Processing Pipeline a23c2206bd93cb29ca2b8186860c28d0 https://www.encodeproject.org/files/ENCFF506PCG/@@download/ENCFF506PCG.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF553PWA bed narrowPeak optimal idr thresholded peaks ENCSR000BLE ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF157CCV, ENCFF169DCU, ENCFF245NLP 926013 ENCODE Processing Pipeline 3400c823c9ffb82c25a3addbaa5fa42a https://www.encodeproject.org/files/ENCFF553PWA/@@download/ENCFF553PWA.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PWE bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PWX 720538081 Richard Myers, HAIB ebaf8016dcf3df3de025e1252e3c8702 https://www.encodeproject.org/files/ENCFF000PWE/@@download/ENCFF000PWE.bam hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF000PWF bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PWM 557536240 Richard Myers, HAIB 51666bc2804b2fe5ab82358780541359 https://www.encodeproject.org/files/ENCFF000PWF/@@download/ENCFF000PWF.bam hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF000PWG bigBed broadPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJA 111857 Richard Myers, HAIB 1e15281beb62aaaf35c64701289ad0c1 https://www.encodeproject.org/files/ENCFF000PWG/@@download/ENCFF000PWG.bigBed hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF000PWH bigBed broadPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJB 113235 Richard Myers, HAIB 341a3050a12bf3e7280c2f6a9ac7ada5 https://www.encodeproject.org/files/ENCFF000PWH/@@download/ENCFF000PWH.bigBed hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF000PWJ bigWig raw signal ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 4132178 Richard Myers, HAIB 6745d65ccbaed5ca873be353470d29c2 https://www.encodeproject.org/files/ENCFF000PWJ/@@download/ENCFF000PWJ.bigWig hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF000PWK bigWig raw signal ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 3817070 Richard Myers, HAIB e292a5f8ca3b0c72e80e03a8c917aacd https://www.encodeproject.org/files/ENCFF000PWK/@@download/ENCFF000PWK.bigWig hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF000PWM fastq reads ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 458943335 Richard Myers, HAIB 7e39870827a7f0cd15cf57baa209be36 https://www.encodeproject.org/files/ENCFF000PWM/@@download/ENCFF000PWM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF000PWX fastq reads ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 76 single-ended 1392869617 Richard Myers, HAIB f4447127e090b80ea9dab7f201e53678 https://www.encodeproject.org/files/ENCFF000PWX/@@download/ENCFF000PWX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released inconsistent control read length, mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF001UJA bed broadPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 37409 Richard Myers, HAIB 6fd77f66e0f4d0b77ed4aa658d2e99d0 https://www.encodeproject.org/files/ENCFF001UJA/@@download/ENCFF001UJA.bed.gz hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF001UJB bed broadPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 38675 Richard Myers, HAIB 3f18ccd4f8287ec6d4cd8247770797af https://www.encodeproject.org/files/ENCFF001UJB/@@download/ENCFF001UJB.bed.gz hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF002CLP bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 87373 ENCODE Consortium Analysis Working Group 84b23b96b527536feaeb011ecb3ad402 https://www.encodeproject.org/files/ENCFF002CLP/@@download/ENCFF002CLP.bed.gz hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF425JRS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE ENCFF002CLP 217446 ENCODE Consortium 282206bcc3b18c3f0f8b92dc3e8594f9 https://www.encodeproject.org/files/ENCFF425JRS/@@download/ENCFF425JRS.bigBed hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF155DTB bam unfiltered alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWM, ENCFF807MUK 655723262 ENCODE Processing Pipeline 16abde6570ba634984c90c7c346fe4d5 https://www.encodeproject.org/files/ENCFF155DTB/@@download/ENCFF155DTB.bam hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF477WUN bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWM, ENCFF807MUK 397215851 ENCODE Processing Pipeline 000529a709d164a7b08e8d9381b02c07 https://www.encodeproject.org/files/ENCFF477WUN/@@download/ENCFF477WUN.bam hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF944QTZ bam unfiltered alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWM, ENCFF643CGH 657193655 ENCODE Processing Pipeline 8a38def61e89d0be68234a386f9f4993 https://www.encodeproject.org/files/ENCFF944QTZ/@@download/ENCFF944QTZ.bam GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF554KEG bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWM, ENCFF643CGH 396985738 ENCODE Processing Pipeline 5de208dd52266608c88b19b9e202a800 https://www.encodeproject.org/files/ENCFF554KEG/@@download/ENCFF554KEG.bam GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF570LWC bam unfiltered alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWX, ENCFF807MUK 982724671 ENCODE Processing Pipeline 6624bf8ddb7b8641600fa1a3aae7113d https://www.encodeproject.org/files/ENCFF570LWC/@@download/ENCFF570LWC.bam hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF096ONF bam unfiltered alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWX, ENCFF643CGH 984318198 ENCODE Processing Pipeline d77dd3c35a24702b2be39a6f20d703b3 https://www.encodeproject.org/files/ENCFF096ONF/@@download/ENCFF096ONF.bam GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF144FIS bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWX, ENCFF807MUK 538905345 ENCODE Processing Pipeline 4ccc9f5f42e756338655459cb70233c1 https://www.encodeproject.org/files/ENCFF144FIS/@@download/ENCFF144FIS.bam hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF339YBR bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWX, ENCFF643CGH 538645887 ENCODE Processing Pipeline 755e102a0073dee13ed0d84d5bff6031 https://www.encodeproject.org/files/ENCFF339YBR/@@download/ENCFF339YBR.bam GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF185HLZ bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144FIS, ENCFF477WUN, ENCFF750MIM 4909274 ENCODE Processing Pipeline 5f04cd4551c1346375f9e1b5209e8658 https://www.encodeproject.org/files/ENCFF185HLZ/@@download/ENCFF185HLZ.bed.gz hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF111ACL bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144FIS, ENCFF477WUN, ENCFF750MIM 202624620 ENCODE Processing Pipeline bbcdb762f02bf274d36436560b862748 https://www.encodeproject.org/files/ENCFF111ACL/@@download/ENCFF111ACL.bigWig hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF616PGU bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF477WUN, ENCFF750MIM 197347743 ENCODE Processing Pipeline ad370558af4533007592f2b31cd20073 https://www.encodeproject.org/files/ENCFF616PGU/@@download/ENCFF616PGU.bigWig hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF626JTH bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144FIS, ENCFF477WUN, ENCFF750MIM 349306273 ENCODE Processing Pipeline 90ab4462159eea14f8579117d35b0646 https://www.encodeproject.org/files/ENCFF626JTH/@@download/ENCFF626JTH.bigWig hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF048RNJ bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF674BPH 1635474 ENCODE Processing Pipeline 0cba7ff37df01632b5f0f8861d312e46 https://www.encodeproject.org/files/ENCFF048RNJ/@@download/ENCFF048RNJ.bigBed hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF699ZGA bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF650YKB 7372238 ENCODE Processing Pipeline 0ea46f83cf243e5fc873d0e8c4527c84 https://www.encodeproject.org/files/ENCFF699ZGA/@@download/ENCFF699ZGA.bigBed hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF861ADT bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF185HLZ 10472407 ENCODE Processing Pipeline 15e27ab0725a5ed7044e9419034924e0 https://www.encodeproject.org/files/ENCFF861ADT/@@download/ENCFF861ADT.bigBed hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF267IDK bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF144FIS, ENCFF750MIM 209140686 ENCODE Processing Pipeline b8718cb0cb2e65abf789c258b42765b8 https://www.encodeproject.org/files/ENCFF267IDK/@@download/ENCFF267IDK.bigWig hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF467UPX bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF477WUN, ENCFF750MIM 210289059 ENCODE Processing Pipeline f5cada0098d8e886b6d7e7aa2d80c960 https://www.encodeproject.org/files/ENCFF467UPX/@@download/ENCFF467UPX.bigWig hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF565MZY bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF144FIS, ENCFF750MIM 205775466 ENCODE Processing Pipeline a6e883091d38f473297b97d10617ee4d https://www.encodeproject.org/files/ENCFF565MZY/@@download/ENCFF565MZY.bigWig hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF674BPH bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF144FIS, ENCFF750MIM 755262 ENCODE Processing Pipeline 0dd0eeeb0b8df3d7fc9612b201349848 https://www.encodeproject.org/files/ENCFF674BPH/@@download/ENCFF674BPH.bed.gz hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF650YKB bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF477WUN, ENCFF750MIM 3690353 ENCODE Processing Pipeline d43b5690540dd71c1b9f817ded4a79c2 https://www.encodeproject.org/files/ENCFF650YKB/@@download/ENCFF650YKB.bed.gz hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF203EDM bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF185HLZ, ENCFF650YKB, ENCFF674BPH 40925 ENCODE Processing Pipeline 3946dde3684d502243421593940f2481 https://www.encodeproject.org/files/ENCFF203EDM/@@download/ENCFF203EDM.bed.gz hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF064TZP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF203EDM 138965 ENCODE Processing Pipeline 502e3f56d69302cf4942e08d4371794b https://www.encodeproject.org/files/ENCFF064TZP/@@download/ENCFF064TZP.bigBed hg19 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF797PZA bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF554KEG, ENCFF772PJM 210187967 ENCODE Processing Pipeline a66ec8fedbc253795b5439026c71137a https://www.encodeproject.org/files/ENCFF797PZA/@@download/ENCFF797PZA.bigWig GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF875ZJG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF496YJC 137578 ENCODE Processing Pipeline 0dac1daf7ff1740cf66c6bff33d52ae3 https://www.encodeproject.org/files/ENCFF875ZJG/@@download/ENCFF875ZJG.bigBed GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF877MYD bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339YBR, ENCFF772PJM 208396701 ENCODE Processing Pipeline bcf8206d1e148f5b314cd703272a40f1 https://www.encodeproject.org/files/ENCFF877MYD/@@download/ENCFF877MYD.bigWig GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF922MWD bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF339YBR, ENCFF554KEG, ENCFF772PJM 202492824 ENCODE Processing Pipeline a2cda7c36aada0382889700b65abbe23 https://www.encodeproject.org/files/ENCFF922MWD/@@download/ENCFF922MWD.bigWig GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF228NGU bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339YBR, ENCFF772PJM 204719857 ENCODE Processing Pipeline ce5b36b2fd0b4c4cc093386fbf212d7f https://www.encodeproject.org/files/ENCFF228NGU/@@download/ENCFF228NGU.bigWig GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF193PRL bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF554KEG, ENCFF772PJM 197217602 ENCODE Processing Pipeline bbb2f866c40001674485ca04893371e8 https://www.encodeproject.org/files/ENCFF193PRL/@@download/ENCFF193PRL.bigWig GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF240CAY bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF339YBR, ENCFF554KEG, ENCFF772PJM 354079504 ENCODE Processing Pipeline e0a1495b77b49a85b8bfe39616b31494 https://www.encodeproject.org/files/ENCFF240CAY/@@download/ENCFF240CAY.bigWig GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF021MAG bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339YBR, ENCFF772PJM 740067 ENCODE Processing Pipeline 1868d284f096224a23cac87210ff9ae3 https://www.encodeproject.org/files/ENCFF021MAG/@@download/ENCFF021MAG.bed.gz GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF569NCI bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF554KEG, ENCFF772PJM 3688898 ENCODE Processing Pipeline aeaf21a2c7cabb34d3867058626708c2 https://www.encodeproject.org/files/ENCFF569NCI/@@download/ENCFF569NCI.bed.gz GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF973HTC bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF339YBR, ENCFF554KEG, ENCFF772PJM 4902942 ENCODE Processing Pipeline b88af5fd25ed5478d6473a9d08af76e3 https://www.encodeproject.org/files/ENCFF973HTC/@@download/ENCFF973HTC.bed.gz GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF656ZAC bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF021MAG 1605825 ENCODE Processing Pipeline 572b3063710e8d84cb2fd87d6ed8f057 https://www.encodeproject.org/files/ENCFF656ZAC/@@download/ENCFF656ZAC.bigBed GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF895JIJ bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF569NCI 7370051 ENCODE Processing Pipeline e2e58cf1363431fba69b8fbfba332d61 https://www.encodeproject.org/files/ENCFF895JIJ/@@download/ENCFF895JIJ.bigBed GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF975KML bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF973HTC 10475428 ENCODE Processing Pipeline 285285daf76357434cb9f21b32495f78 https://www.encodeproject.org/files/ENCFF975KML/@@download/ENCFF975KML.bigBed GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF496YJC bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021MAG, ENCFF419RSJ, ENCFF569NCI, ENCFF973HTC 39755 ENCODE Processing Pipeline f1fc3159c8dc7811416c2320108d41bb https://www.encodeproject.org/files/ENCFF496YJC/@@download/ENCFF496YJC.bed.gz GRCh38 released mixed read lengths, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample control low read depth ENCFF000OQT bam alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000ORG 910115238 Richard Myers, HAIB 402b026e5071994298fe2881a8a67ca4 https://www.encodeproject.org/files/ENCFF000OQT/@@download/ENCFF000OQT.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OQV bigBed broadPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBW 1128907 Richard Myers, HAIB dffb0c62a2dbcf4013e2f623ea612643 https://www.encodeproject.org/files/ENCFF000OQV/@@download/ENCFF000OQV.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OQW bam alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000ORK 886177594 Richard Myers, HAIB de745c0e0d4007a38eddc2006f5da196 https://www.encodeproject.org/files/ENCFF000OQW/@@download/ENCFF000OQW.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OQX bigBed broadPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBX 2733888 Richard Myers, HAIB 8aed0edbb63788ddd188621004281391 https://www.encodeproject.org/files/ENCFF000OQX/@@download/ENCFF000OQX.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OQZ bigWig raw signal ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 43591683 Richard Myers, HAIB 561c64a583e2c4cbf92d00cc8f8c67f7 https://www.encodeproject.org/files/ENCFF000OQZ/@@download/ENCFF000OQZ.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000ORB bigWig raw signal ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 71304324 Richard Myers, HAIB e0eab4ab3af87a067c8338f571d2daf1 https://www.encodeproject.org/files/ENCFF000ORB/@@download/ENCFF000ORB.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000ORG fastq reads ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1015876633 Richard Myers, HAIB b47c3daab013e08c3475eb585aebe8bb https://www.encodeproject.org/files/ENCFF000ORG/@@download/ENCFF000ORG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth biological replicates with identical biosample ENCFF000ORK fastq reads ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1446165382 Richard Myers, HAIB 0aa2a597eafce86d9bfa7ccb7b6cc507 https://www.encodeproject.org/files/ENCFF000ORK/@@download/ENCFF000ORK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth biological replicates with identical biosample ENCFF001UBW bed broadPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 669487 Richard Myers, HAIB c2a1dfa1df04db70416436e1c522e3af https://www.encodeproject.org/files/ENCFF001UBW/@@download/ENCFF001UBW.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UBX bed broadPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 1398278 Richard Myers, HAIB 92984b966ef05a0d5ddcbaebda84cd6c https://www.encodeproject.org/files/ENCFF001UBX/@@download/ENCFF001UBX.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CJD bed narrowPeak optimal idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 442368 ENCODE Consortium Analysis Working Group 9194d81a93b97c5ec0d818439baead9d https://www.encodeproject.org/files/ENCFF002CJD/@@download/ENCFF002CJD.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF979YKM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE ENCFF002CJD 1099644 ENCODE Consortium 6cab3423e7c8187e193ee24d411380ec https://www.encodeproject.org/files/ENCFF979YKM/@@download/ENCFF979YKM.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF255HOK bam unfiltered alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ORG, ENCFF643CGH 1252520166 ENCODE Processing Pipeline 6aa5c55a0c519859f5bef52c44604433 https://www.encodeproject.org/files/ENCFF255HOK/@@download/ENCFF255HOK.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF079DUB bam alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ORG, ENCFF643CGH 686200736 ENCODE Processing Pipeline 8dc9291215448a1964aee6d8956a40b7 https://www.encodeproject.org/files/ENCFF079DUB/@@download/ENCFF079DUB.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF167SZW bam unfiltered alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORK, ENCFF643CGH 1843911910 ENCODE Processing Pipeline 41b0d78fa70747a46e812b945f3f67eb https://www.encodeproject.org/files/ENCFF167SZW/@@download/ENCFF167SZW.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF712MPW bam alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORK, ENCFF643CGH 979513401 ENCODE Processing Pipeline 883ae5ff85be02f25e411a1c6e931a77 https://www.encodeproject.org/files/ENCFF712MPW/@@download/ENCFF712MPW.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF256PPM bam unfiltered alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ORG, ENCFF807MUK 1250711133 ENCODE Processing Pipeline 2e2d8af1bce3706fb1ca76aa34ff2689 https://www.encodeproject.org/files/ENCFF256PPM/@@download/ENCFF256PPM.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF720NFF bam alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ORG, ENCFF807MUK 686705288 ENCODE Processing Pipeline 4dc24b98db700f734095131f5c8be1e9 https://www.encodeproject.org/files/ENCFF720NFF/@@download/ENCFF720NFF.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF358LZS bam unfiltered alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORK, ENCFF807MUK 1841250714 ENCODE Processing Pipeline ddead5d83321572932d7ab9649763109 https://www.encodeproject.org/files/ENCFF358LZS/@@download/ENCFF358LZS.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF520MDX bam alignments ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORK, ENCFF807MUK 980130969 ENCODE Processing Pipeline e8ce4ee1d3bac77cb7735fbb5cf717e1 https://www.encodeproject.org/files/ENCFF520MDX/@@download/ENCFF520MDX.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF316ZKV bigWig signal p-value ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF720NFF 409317845 ENCODE Processing Pipeline 669b78a98d1a34243c6fb00cb83371a9 https://www.encodeproject.org/files/ENCFF316ZKV/@@download/ENCFF316ZKV.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF073KHN bigWig signal p-value ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF079DUB, ENCFF948LKH 389817886 ENCODE Processing Pipeline 3774b7faf86de9d362e46782ed2597bf https://www.encodeproject.org/files/ENCFF073KHN/@@download/ENCFF073KHN.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF413PQK bigWig signal p-value ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF520MDX 458769970 ENCODE Processing Pipeline d13a7f674fa246ddbe83c785f31bdb01 https://www.encodeproject.org/files/ENCFF413PQK/@@download/ENCFF413PQK.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF021INW bigWig signal p-value ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF712MPW, ENCFF948LKH 509183066 ENCODE Processing Pipeline 4cc321a557c431eaeb00944e06b22ac3 https://www.encodeproject.org/files/ENCFF021INW/@@download/ENCFF021INW.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF976USD bigWig signal p-value ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF520MDX, ENCFF720NFF 536662716 ENCODE Processing Pipeline 589972575534f20574220b9b6dbbcb37 https://www.encodeproject.org/files/ENCFF976USD/@@download/ENCFF976USD.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF786QHR bigWig fold change over control ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF720NFF 268109157 ENCODE Processing Pipeline be3b55e69818f41da991b297ab32892a https://www.encodeproject.org/files/ENCFF786QHR/@@download/ENCFF786QHR.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF834EMW bigWig signal p-value ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF079DUB, ENCFF712MPW, ENCFF948LKH 536402085 ENCODE Processing Pipeline 661f26223a0939690375301fd5718e9f https://www.encodeproject.org/files/ENCFF834EMW/@@download/ENCFF834EMW.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF275IIJ bigWig fold change over control ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF520MDX 340876940 ENCODE Processing Pipeline 098eb553ca79e0f1dfd731bce3c6c376 https://www.encodeproject.org/files/ENCFF275IIJ/@@download/ENCFF275IIJ.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF342XVZ bigWig fold change over control ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF079DUB, ENCFF948LKH 267578811 ENCODE Processing Pipeline 85fd9fea65d799fce76c4dd012d1d9ca https://www.encodeproject.org/files/ENCFF342XVZ/@@download/ENCFF342XVZ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF573RFU bed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF520MDX 6077110 ENCODE Processing Pipeline 599496252528fdea7244093fa141342e https://www.encodeproject.org/files/ENCFF573RFU/@@download/ENCFF573RFU.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF522YHU bigWig fold change over control ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF520MDX, ENCFF720NFF 521467347 ENCODE Processing Pipeline 23c17d4f0058a10059ff55e1857fa822 https://www.encodeproject.org/files/ENCFF522YHU/@@download/ENCFF522YHU.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF718URH bed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF720NFF 6464351 ENCODE Processing Pipeline 41b95c7e11d006b7962873e1e125fd4c https://www.encodeproject.org/files/ENCFF718URH/@@download/ENCFF718URH.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF194VYF bigBed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF718URH 12078525 ENCODE Processing Pipeline 881f00b66a855cde372882af76756080 https://www.encodeproject.org/files/ENCFF194VYF/@@download/ENCFF194VYF.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF214YQS bed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF520MDX, ENCFF720NFF 6848113 ENCODE Processing Pipeline bb280f43953f5edbadf681e4a18d89fa https://www.encodeproject.org/files/ENCFF214YQS/@@download/ENCFF214YQS.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF355PUT bigBed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF573RFU 12023051 ENCODE Processing Pipeline 14f3b333f38245546fcf818d7552ee82 https://www.encodeproject.org/files/ENCFF355PUT/@@download/ENCFF355PUT.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF010JNY bigBed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF214YQS 12270443 ENCODE Processing Pipeline 2a832751c8b650d5b83e02707d774e83 https://www.encodeproject.org/files/ENCFF010JNY/@@download/ENCFF010JNY.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF627MAZ bigWig fold change over control ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF712MPW, ENCFF948LKH 339319734 ENCODE Processing Pipeline d67ba63173c7d0b746f170cc4e495248 https://www.encodeproject.org/files/ENCFF627MAZ/@@download/ENCFF627MAZ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF148BJW bed narrowPeak conservative idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF214YQS, ENCFF573RFU, ENCFF718URH 457058 ENCODE Processing Pipeline 2902df91e4906542d3dfe8f6b1c71943 https://www.encodeproject.org/files/ENCFF148BJW/@@download/ENCFF148BJW.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF135GBT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF148BJW 1110855 ENCODE Processing Pipeline 2faf7efb3c018d44f9078f0d64b21529 https://www.encodeproject.org/files/ENCFF135GBT/@@download/ENCFF135GBT.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF375BFR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF450NDU 1355910 ENCODE Processing Pipeline e7658068c61e747008cd136564e3bb8c https://www.encodeproject.org/files/ENCFF375BFR/@@download/ENCFF375BFR.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF450NDU bed narrowPeak optimal idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF214YQS, ENCFF573RFU, ENCFF718URH 594411 ENCODE Processing Pipeline 90b03cced3ab0a76845d32604a921ccd https://www.encodeproject.org/files/ENCFF450NDU/@@download/ENCFF450NDU.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF655OPV bigWig fold change over control ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF079DUB, ENCFF712MPW, ENCFF948LKH 525214897 ENCODE Processing Pipeline 2e0197d3eac429ebc573e559c58e2591 https://www.encodeproject.org/files/ENCFF655OPV/@@download/ENCFF655OPV.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF488WSK bed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF079DUB, ENCFF948LKH 6390256 ENCODE Processing Pipeline 721b9a49441e4a0344ab97877195cada https://www.encodeproject.org/files/ENCFF488WSK/@@download/ENCFF488WSK.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF633FYK bed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF712MPW, ENCFF948LKH 6146628 ENCODE Processing Pipeline 485f8c6f242c9bf4964af9f6d35119c5 https://www.encodeproject.org/files/ENCFF633FYK/@@download/ENCFF633FYK.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF308KBZ bigBed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF633FYK 12117466 ENCODE Processing Pipeline 0c9d51f02e90d9ece3ea64183108295f https://www.encodeproject.org/files/ENCFF308KBZ/@@download/ENCFF308KBZ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF340BII bed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF079DUB, ENCFF712MPW, ENCFF948LKH 6748227 ENCODE Processing Pipeline f3ed1420b468331ff5091b290cdb59c8 https://www.encodeproject.org/files/ENCFF340BII/@@download/ENCFF340BII.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF877WOA bigBed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488WSK 11989471 ENCODE Processing Pipeline 4abd16530598301f43a12604df4689d4 https://www.encodeproject.org/files/ENCFF877WOA/@@download/ENCFF877WOA.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF915EVH bigBed narrowPeak peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF340BII 12154840 ENCODE Processing Pipeline 545c5953b2054ccd8da99d3186f20807 https://www.encodeproject.org/files/ENCFF915EVH/@@download/ENCFF915EVH.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF417QTQ bed narrowPeak conservative idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF340BII, ENCFF419RSJ, ENCFF488WSK, ENCFF633FYK 454259 ENCODE Processing Pipeline f1486f0535e1d842b3693080892ade44 https://www.encodeproject.org/files/ENCFF417QTQ/@@download/ENCFF417QTQ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF418QVJ bed narrowPeak optimal idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF340BII, ENCFF419RSJ, ENCFF488WSK, ENCFF633FYK 584500 ENCODE Processing Pipeline e02c29a59b2bea50cecbdaf1d09060a2 https://www.encodeproject.org/files/ENCFF418QVJ/@@download/ENCFF418QVJ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF801OFE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF418QVJ 1341917 ENCODE Processing Pipeline c8cb5a5ccf90e07f15dc2af5db82a477 https://www.encodeproject.org/files/ENCFF801OFE/@@download/ENCFF801OFE.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF058LIG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIC ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF417QTQ 1107997 ENCODE Processing Pipeline db572d8cd78c88c6cc53ee886ffb4871 https://www.encodeproject.org/files/ENCFF058LIG/@@download/ENCFF058LIG.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF442RQA fastq reads ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 1 50 single-ended 1388162105 Richard Myers, HAIB a02def954828c45dd020c007c5691ac9 SRA:SRR5339317 https://www.encodeproject.org/files/ENCFF442RQA/@@download/ENCFF442RQA.fastq.gz HiSeq 2000 /files/ENCFF876NBT/ released low read depth ENCFF194UYN fastq reads ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 1 50 single-ended 1423091005 Richard Myers, HAIB 2b4fa360bfc2f7fda55fc34a7ac32797 SRA:SRR5339318 https://www.encodeproject.org/files/ENCFF194UYN/@@download/ENCFF194UYN.fastq.gz HiSeq 2000 /files/ENCFF737ELZ/ released low read depth ENCFF252RRA bam unfiltered alignments ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 50 ENCFF442RQA, ENCFF643CGH 1504530751 ENCODE Processing Pipeline 2e26dc9f2bfa04ef52b46a7db9f15275 https://www.encodeproject.org/files/ENCFF252RRA/@@download/ENCFF252RRA.bam GRCh38 released low read depth ENCFF939GXE bam unfiltered alignments ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 50 ENCFF194UYN, ENCFF807MUK 1588514843 ENCODE Processing Pipeline 8f9f98d2a4ff44658a832a53080ea9be https://www.encodeproject.org/files/ENCFF939GXE/@@download/ENCFF939GXE.bam hg19 released low read depth ENCFF643DLK bam unfiltered alignments ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 50 ENCFF442RQA, ENCFF807MUK 1499174474 ENCODE Processing Pipeline c35497f40e3e443f651e14acbfccdfaa https://www.encodeproject.org/files/ENCFF643DLK/@@download/ENCFF643DLK.bam hg19 released low read depth ENCFF692WPN bam unfiltered alignments ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 50 ENCFF194UYN, ENCFF643CGH 1596126292 ENCODE Processing Pipeline ed6d3fa2447596b11a93e89f824da834 https://www.encodeproject.org/files/ENCFF692WPN/@@download/ENCFF692WPN.bam GRCh38 released low read depth ENCFF871ONC bam alignments ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 50 ENCFF442RQA, ENCFF643CGH 1089171569 ENCODE Processing Pipeline 667308a98938dd63e68446beadab1225 https://www.encodeproject.org/files/ENCFF871ONC/@@download/ENCFF871ONC.bam GRCh38 released low read depth ENCFF679MUX bam alignments ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 50 ENCFF442RQA, ENCFF807MUK 1089445243 ENCODE Processing Pipeline 6e13c1b81f936aa68d5891290c30df43 https://www.encodeproject.org/files/ENCFF679MUX/@@download/ENCFF679MUX.bam hg19 released low read depth ENCFF305LRO bam alignments ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 50 ENCFF194UYN, ENCFF807MUK 1205497176 ENCODE Processing Pipeline ac9ad6198085b9a273398d0238acb6bd https://www.encodeproject.org/files/ENCFF305LRO/@@download/ENCFF305LRO.bam hg19 released low read depth ENCFF370ZNH bam alignments ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 50 ENCFF194UYN, ENCFF643CGH 1205475340 ENCODE Processing Pipeline 9d48da9c24bff0097f71b110a7db332b https://www.encodeproject.org/files/ENCFF370ZNH/@@download/ENCFF370ZNH.bam GRCh38 released low read depth ENCFF639QJX bigBed narrowPeak conservative idr thresholded peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF044GIB 563571 ENCODE Processing Pipeline 820582c8315478d5036fff8e755b9632 https://www.encodeproject.org/files/ENCFF639QJX/@@download/ENCFF639QJX.bigBed hg19 released low read depth ENCFF104QVL bigWig signal p-value ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 ENCFF679MUX, ENCFF969DYI, ENCFF994YBV 881576587 ENCODE Processing Pipeline e20e6bc56449e8abacda57c5867d4cca https://www.encodeproject.org/files/ENCFF104QVL/@@download/ENCFF104QVL.bigWig hg19 released low read depth ENCFF949TDA bed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF305LRO, ENCFF679MUX, ENCFF969DYI, ENCFF994YBV 6781404 ENCODE Processing Pipeline 01228792631120dc1ebb41b5ef99e2ce https://www.encodeproject.org/files/ENCFF949TDA/@@download/ENCFF949TDA.bed.gz hg19 released low read depth ENCFF791BSE bigWig signal p-value ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 ENCFF305LRO, ENCFF969DYI, ENCFF994YBV 851167302 ENCODE Processing Pipeline 1d082739d0fad086b8c4a605a79a4956 https://www.encodeproject.org/files/ENCFF791BSE/@@download/ENCFF791BSE.bigWig hg19 released low read depth ENCFF790HIL bigWig signal p-value ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF305LRO, ENCFF679MUX, ENCFF969DYI, ENCFF994YBV 978448461 ENCODE Processing Pipeline 1bde846c5217c810bddc1f776acedf72 https://www.encodeproject.org/files/ENCFF790HIL/@@download/ENCFF790HIL.bigWig hg19 released low read depth ENCFF104YZH bigWig fold change over control ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF305LRO, ENCFF679MUX, ENCFF969DYI, ENCFF994YBV 1101775731 ENCODE Processing Pipeline adf9826b2141c2d8e75ec02da690a873 https://www.encodeproject.org/files/ENCFF104YZH/@@download/ENCFF104YZH.bigWig hg19 released low read depth ENCFF258RLV bigWig fold change over control ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 ENCFF679MUX, ENCFF969DYI, ENCFF994YBV 650451591 ENCODE Processing Pipeline c6fe767c70856ce738016b50ee9c1a00 https://www.encodeproject.org/files/ENCFF258RLV/@@download/ENCFF258RLV.bigWig hg19 released low read depth ENCFF715NEW bigWig fold change over control ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 ENCFF305LRO, ENCFF969DYI, ENCFF994YBV 834418340 ENCODE Processing Pipeline 832bb426119c681287c6c7128e19fcfb https://www.encodeproject.org/files/ENCFF715NEW/@@download/ENCFF715NEW.bigWig hg19 released low read depth ENCFF995FGG bed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 ENCFF305LRO, ENCFF969DYI, ENCFF994YBV 6235893 ENCODE Processing Pipeline 42d466ae63217d0f4e7128436136984f https://www.encodeproject.org/files/ENCFF995FGG/@@download/ENCFF995FGG.bed.gz hg19 released low read depth ENCFF451UDV bigBed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 ENCFF995FGG 13468048 ENCODE Processing Pipeline eec00f1924564502f253e165445b01de https://www.encodeproject.org/files/ENCFF451UDV/@@download/ENCFF451UDV.bigBed hg19 released low read depth ENCFF219PGQ bigBed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF949TDA 13568409 ENCODE Processing Pipeline 4616ecae4180fa2d61595a1519a1bb66 https://www.encodeproject.org/files/ENCFF219PGQ/@@download/ENCFF219PGQ.bigBed hg19 released low read depth ENCFF545UIM bed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 ENCFF679MUX, ENCFF969DYI, ENCFF994YBV 6010076 ENCODE Processing Pipeline 50ab1e0210599afa6942f301dbeafc67 https://www.encodeproject.org/files/ENCFF545UIM/@@download/ENCFF545UIM.bed.gz hg19 released low read depth ENCFF177PAU bigBed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 ENCFF545UIM 13522050 ENCODE Processing Pipeline 5f79a4ce90bcee6b26d5512b3175adf8 https://www.encodeproject.org/files/ENCFF177PAU/@@download/ENCFF177PAU.bigBed hg19 released low read depth ENCFF044GIB bed narrowPeak conservative idr thresholded peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF001TDO, ENCFF545UIM, ENCFF949TDA, ENCFF995FGG 233348 ENCODE Processing Pipeline 812e77c7934b90ede715926dfdbda1ed https://www.encodeproject.org/files/ENCFF044GIB/@@download/ENCFF044GIB.bed.gz hg19 released low read depth ENCFF227PWE bed narrowPeak optimal idr thresholded peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF001TDO, ENCFF545UIM, ENCFF949TDA, ENCFF995FGG 252775 ENCODE Processing Pipeline 123eb7f896c8a4e756af0971f159b1b6 https://www.encodeproject.org/files/ENCFF227PWE/@@download/ENCFF227PWE.bed.gz hg19 released low read depth ENCFF450FCD bigBed narrowPeak optimal idr thresholded peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF227PWE 598260 ENCODE Processing Pipeline 62a63a001ebeacbcb34fdccfbb117916 https://www.encodeproject.org/files/ENCFF450FCD/@@download/ENCFF450FCD.bigBed hg19 released low read depth ENCFF381UGG bigWig signal p-value ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 ENCFF372RRO, ENCFF871ONC, ENCFF894EOG 830994447 ENCODE Processing Pipeline ae9d526c14e86a557e2510c6d78456bc https://www.encodeproject.org/files/ENCFF381UGG/@@download/ENCFF381UGG.bigWig GRCh38 released low read depth ENCFF909PEV bigWig signal p-value ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 ENCFF370ZNH, ENCFF372RRO, ENCFF894EOG 905148141 ENCODE Processing Pipeline 0bd32f196b5a7e1be3408dae683521b0 https://www.encodeproject.org/files/ENCFF909PEV/@@download/ENCFF909PEV.bigWig GRCh38 released low read depth ENCFF700EFC bigWig signal p-value ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF370ZNH, ENCFF372RRO, ENCFF871ONC, ENCFF894EOG 1092761079 ENCODE Processing Pipeline 17377613e304b63dd9dad132c04396fd https://www.encodeproject.org/files/ENCFF700EFC/@@download/ENCFF700EFC.bigWig GRCh38 released low read depth ENCFF162JFF bigWig fold change over control ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 ENCFF372RRO, ENCFF871ONC, ENCFF894EOG 651638951 ENCODE Processing Pipeline 52474953e1efce22c3b4da527313cf3a https://www.encodeproject.org/files/ENCFF162JFF/@@download/ENCFF162JFF.bigWig GRCh38 released low read depth ENCFF946NIQ bigWig fold change over control ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 ENCFF370ZNH, ENCFF372RRO, ENCFF894EOG 843769885 ENCODE Processing Pipeline 2c4d5ccf39f15ca00c4a5f0e01b198ae https://www.encodeproject.org/files/ENCFF946NIQ/@@download/ENCFF946NIQ.bigWig GRCh38 released low read depth ENCFF422DYK bigWig fold change over control ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF370ZNH, ENCFF372RRO, ENCFF871ONC, ENCFF894EOG 1105475727 ENCODE Processing Pipeline 0d38c463aa57894d8303af7945bb80ce https://www.encodeproject.org/files/ENCFF422DYK/@@download/ENCFF422DYK.bigWig GRCh38 released low read depth ENCFF090SRG bed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 ENCFF370ZNH, ENCFF372RRO, ENCFF894EOG 6072229 ENCODE Processing Pipeline 8b04ee54a38a059984e8b9d040e73d7a https://www.encodeproject.org/files/ENCFF090SRG/@@download/ENCFF090SRG.bed.gz GRCh38 released low read depth ENCFF389QED bed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF370ZNH, ENCFF372RRO, ENCFF871ONC, ENCFF894EOG 6604895 ENCODE Processing Pipeline 16ed25c85bbd0bc67bf0f8cd8cdf47cc https://www.encodeproject.org/files/ENCFF389QED/@@download/ENCFF389QED.bed.gz GRCh38 released low read depth ENCFF280UTT bed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 ENCFF372RRO, ENCFF871ONC, ENCFF894EOG 5850149 ENCODE Processing Pipeline 3e965a3cf8a5beedb49e30a7bf166b3a https://www.encodeproject.org/files/ENCFF280UTT/@@download/ENCFF280UTT.bed.gz GRCh38 released low read depth ENCFF368QOL bigBed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1 ENCFF280UTT 13513505 ENCODE Processing Pipeline e16676624d2bafd0339e395ec5a2e4cf https://www.encodeproject.org/files/ENCFF368QOL/@@download/ENCFF368QOL.bigBed GRCh38 released low read depth ENCFF010JQD bigBed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 2 ENCFF090SRG 13445746 ENCODE Processing Pipeline ff82efcc0791b93ecb2cb02f57dfe342 https://www.encodeproject.org/files/ENCFF010JQD/@@download/ENCFF010JQD.bigBed GRCh38 released low read depth ENCFF966LGI bigBed narrowPeak peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF389QED 13552013 ENCODE Processing Pipeline cd74ab88838de5cca5b6fc9abae6c675 https://www.encodeproject.org/files/ENCFF966LGI/@@download/ENCFF966LGI.bigBed GRCh38 released low read depth ENCFF860SGT bed narrowPeak conservative idr thresholded peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF090SRG, ENCFF280UTT, ENCFF389QED, ENCFF419RSJ 228790 ENCODE Processing Pipeline 71db69f5ac032e22835c1c32c1bb0d8b https://www.encodeproject.org/files/ENCFF860SGT/@@download/ENCFF860SGT.bed.gz GRCh38 released low read depth ENCFF800QTO bed narrowPeak optimal idr thresholded peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF090SRG, ENCFF280UTT, ENCFF389QED, ENCFF419RSJ 249650 ENCODE Processing Pipeline f18f2926570b10f09187264a7eb96774 https://www.encodeproject.org/files/ENCFF800QTO/@@download/ENCFF800QTO.bed.gz GRCh38 released low read depth ENCFF603HEN bigBed narrowPeak optimal idr thresholded peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF800QTO 486818 ENCODE Processing Pipeline 3d0f9785b3fd43c3a154f0bb4834cee6 https://www.encodeproject.org/files/ENCFF603HEN/@@download/ENCFF603HEN.bigBed GRCh38 released low read depth ENCFF998DEZ bigBed narrowPeak conservative idr thresholded peaks ENCSR800QIT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HNF1A-human ENCAB661MMQ DNA False 2016-09-09 ENCODE 1, 2 ENCFF860SGT 456432 ENCODE Processing Pipeline 3dfaab1bf1e76021340e9eb9dd69ec57 https://www.encodeproject.org/files/ENCFF998DEZ/@@download/ENCFF998DEZ.bigBed GRCh38 released low read depth ENCFF000PGC bam alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PGK 352888702 Richard Myers, HAIB 9b085df4529f5196ce51475346602b0f https://www.encodeproject.org/files/ENCFF000PGC/@@download/ENCFF000PGC.bam hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000PGD bigBed broadPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UFK 498014 Richard Myers, HAIB 65d56caa48b23e78071989366dd1cf10 https://www.encodeproject.org/files/ENCFF000PGD/@@download/ENCFF000PGD.bigBed hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000PGE bigBed broadPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UFL 273117 Richard Myers, HAIB 47297b2951b72c07c631c4b5cd19dad3 https://www.encodeproject.org/files/ENCFF000PGE/@@download/ENCFF000PGE.bigBed hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000PGF bam alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PGQ 980831242 Richard Myers, HAIB 4fd3d8124325d0bd4005c4c7d9060156 https://www.encodeproject.org/files/ENCFF000PGF/@@download/ENCFF000PGF.bam hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000PGH bigWig raw signal ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 1 5873811 Richard Myers, HAIB 45228d278526dfe2965ffcc907b6de16 https://www.encodeproject.org/files/ENCFF000PGH/@@download/ENCFF000PGH.bigWig hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PGJ bigWig raw signal ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 1 17396473 Richard Myers, HAIB 907af1a3cb0b75e0162936cac634de86 https://www.encodeproject.org/files/ENCFF000PGJ/@@download/ENCFF000PGJ.bigWig hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PGK fastq reads ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 345518589 Richard Myers, HAIB 12ea48af88da31091a326df2e692e940 https://www.encodeproject.org/files/ENCFF000PGK/@@download/ENCFF000PGK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000PGQ fastq reads ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1052416213 Richard Myers, HAIB b8b4ce4302beae135d7ed74177e955b7 https://www.encodeproject.org/files/ENCFF000PGQ/@@download/ENCFF000PGQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF001UFK bed broadPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 1 291833 Richard Myers, HAIB b6a1c52fa4b045aed481c783161919a9 https://www.encodeproject.org/files/ENCFF001UFK/@@download/ENCFF001UFK.bed.gz hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UFL bed broadPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 1 149790 Richard Myers, HAIB 566a505c87e9b8b0bda8494362436113 https://www.encodeproject.org/files/ENCFF001UFL/@@download/ENCFF001UFL.bed.gz hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CKE bed narrowPeak optimal idr thresholded peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 242774 ENCODE Consortium Analysis Working Group 0066a64c4c0746f05d72f60b35a957f3 https://www.encodeproject.org/files/ENCFF002CKE/@@download/ENCFF002CKE.bed.gz hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF135EXF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE ENCFF002CKE 555872 ENCODE Consortium 61e177a2ea8d68b30b51fa4fda11ed24 https://www.encodeproject.org/files/ENCFF135EXF/@@download/ENCFF135EXF.bigBed hg19 archived moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF671GFD bam unfiltered alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PGK, ENCFF643CGH 432360623 ENCODE Processing Pipeline 1131fed70d206aa6aef9ef5250fd4a15 https://www.encodeproject.org/files/ENCFF671GFD/@@download/ENCFF671GFD.bam GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF091LUF bam alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PGK, ENCFF643CGH 233362825 ENCODE Processing Pipeline 19e564e660967c96f086c7994761a937 https://www.encodeproject.org/files/ENCFF091LUF/@@download/ENCFF091LUF.bam GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF859NNE bam unfiltered alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PGQ, ENCFF643CGH 1216281937 ENCODE Processing Pipeline c4f2d6ab1439d6437c9f636f8b72388b https://www.encodeproject.org/files/ENCFF859NNE/@@download/ENCFF859NNE.bam GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF790ELF bam alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PGQ, ENCFF643CGH 531632187 ENCODE Processing Pipeline 53c72e6e55a6d6ef83c5d03471867993 https://www.encodeproject.org/files/ENCFF790ELF/@@download/ENCFF790ELF.bam GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF096COW bam unfiltered alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PGK, ENCFF807MUK 431958665 ENCODE Processing Pipeline bd9decf1c5dd16010aa663780837c287 https://www.encodeproject.org/files/ENCFF096COW/@@download/ENCFF096COW.bam hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF340OXJ bam alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PGK, ENCFF807MUK 233544524 ENCODE Processing Pipeline b4c98ec32a1e6868948af22d8e91707f https://www.encodeproject.org/files/ENCFF340OXJ/@@download/ENCFF340OXJ.bam hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF286JPQ bam alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PGQ, ENCFF807MUK 531950573 ENCODE Processing Pipeline 520729d465d926a31ac32c6fce5d373a https://www.encodeproject.org/files/ENCFF286JPQ/@@download/ENCFF286JPQ.bam hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF762VQT bam unfiltered alignments ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PGQ, ENCFF807MUK 1212276085 ENCODE Processing Pipeline f65398c18aa6730850cbd6869f9b9672 https://www.encodeproject.org/files/ENCFF762VQT/@@download/ENCFF762VQT.bam hg19 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF342UHS bigWig signal p-value ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF790ELF 409450498 ENCODE Processing Pipeline d70971494a4128c0b468ce41fd122a97 https://www.encodeproject.org/files/ENCFF342UHS/@@download/ENCFF342UHS.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF152TXU bigWig signal p-value ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF091LUF, ENCFF175NMQ 389245740 ENCODE Processing Pipeline b8f48d9d9c6b11ed262bd32160a9db3e https://www.encodeproject.org/files/ENCFF152TXU/@@download/ENCFF152TXU.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF554OZV bigWig fold change over control ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF091LUF, ENCFF175NMQ 147544697 ENCODE Processing Pipeline 62fc19b5e373a397fb7f807e9bb79519 https://www.encodeproject.org/files/ENCFF554OZV/@@download/ENCFF554OZV.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF411VGE bigWig signal p-value ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF091LUF, ENCFF175NMQ, ENCFF790ELF 471671555 ENCODE Processing Pipeline 04c171f9adf238e8691892c3b6adf69c https://www.encodeproject.org/files/ENCFF411VGE/@@download/ENCFF411VGE.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF553ZLQ bigWig fold change over control ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF790ELF 285765341 ENCODE Processing Pipeline 886bc3eebacf6d2f4c50d5e251544e20 https://www.encodeproject.org/files/ENCFF553ZLQ/@@download/ENCFF553ZLQ.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF114WCY bigWig fold change over control ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF091LUF, ENCFF175NMQ, ENCFF790ELF 394416672 ENCODE Processing Pipeline 3b43a6433b1a9cc5c3ca31e101b9ff3d https://www.encodeproject.org/files/ENCFF114WCY/@@download/ENCFF114WCY.bigWig GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF188CEK bed narrowPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF790ELF 4186576 ENCODE Processing Pipeline fbae88a17ce2c778ea1bd535d8731912 https://www.encodeproject.org/files/ENCFF188CEK/@@download/ENCFF188CEK.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF794MTV bed narrowPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF091LUF, ENCFF175NMQ 4026701 ENCODE Processing Pipeline 1053299b42401eacebf45dbd82806d66 https://www.encodeproject.org/files/ENCFF794MTV/@@download/ENCFF794MTV.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF100MOG bed narrowPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF091LUF, ENCFF175NMQ, ENCFF790ELF 5096071 ENCODE Processing Pipeline 8a00f177f2aa7226c7a7561cf6fe102c https://www.encodeproject.org/files/ENCFF100MOG/@@download/ENCFF100MOG.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF948TDI bigBed narrowPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 2 ENCFF188CEK 10382204 ENCODE Processing Pipeline 394fe2f482d09fc7c84d61937ff24864 https://www.encodeproject.org/files/ENCFF948TDI/@@download/ENCFF948TDI.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF493WMB bigBed narrowPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100MOG 10873616 ENCODE Processing Pipeline f189da3252018d5ccc49de1a2ddd0682 https://www.encodeproject.org/files/ENCFF493WMB/@@download/ENCFF493WMB.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF728FYM bigBed narrowPeak peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1 ENCFF794MTV 8424582 ENCODE Processing Pipeline a23e58078afc1b4058d0b3238abffeb9 https://www.encodeproject.org/files/ENCFF728FYM/@@download/ENCFF728FYM.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF592WTD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF812UIZ 358070 ENCODE Processing Pipeline 30bdbf4d6175ddd20b78a76679f51c12 https://www.encodeproject.org/files/ENCFF592WTD/@@download/ENCFF592WTD.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF225MTK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF450SOX 507025 ENCODE Processing Pipeline 1dd8c83e7ede2885e763a721d10020ef https://www.encodeproject.org/files/ENCFF225MTK/@@download/ENCFF225MTK.bigBed GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF812UIZ bed narrowPeak conservative idr thresholded peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100MOG, ENCFF188CEK, ENCFF419RSJ, ENCFF794MTV 167045 ENCODE Processing Pipeline af67c960227227c61b3613d04d167013 https://www.encodeproject.org/files/ENCFF812UIZ/@@download/ENCFF812UIZ.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF450SOX bed narrowPeak optimal idr thresholded peaks ENCSR000BQJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPD-human ENCAB000AFC DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF100MOG, ENCFF188CEK, ENCFF419RSJ, ENCFF794MTV 270726 ENCODE Processing Pipeline 43dd910e8b5a81a13800607bab3d0468 https://www.encodeproject.org/files/ENCFF450SOX/@@download/ENCFF450SOX.bed.gz GRCh38 released moderate library complexity, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF486HCN fastq reads ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 1 50 single-ended 875266771 Richard Myers, HAIB 31bf389486cdaf3783a854d10ea9ca08 SRA:SRR6214406 https://www.encodeproject.org/files/ENCFF486HCN/@@download/ENCFF486HCN.fastq.gz HiSeq 2000 /files/ENCFF158AFC/ released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF698SDI fastq reads ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1118284515 Richard Myers, HAIB bff2c45f04c826d766538daea79e5d48 SRA:SRR6214405 https://www.encodeproject.org/files/ENCFF698SDI/@@download/ENCFF698SDI.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF719VXT bam alignments ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 50 ENCFF486HCN, ENCFF643CGH 720623402 ENCODE Processing Pipeline 28b1f39389ed750668ea2d30174fa1bf https://www.encodeproject.org/files/ENCFF719VXT/@@download/ENCFF719VXT.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF984RIM bam unfiltered alignments ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF698SDI 1227481388 ENCODE Processing Pipeline 94df04fb21f6c45faa3f30152915d2ae https://www.encodeproject.org/files/ENCFF984RIM/@@download/ENCFF984RIM.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF358INR bam unfiltered alignments ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 50 ENCFF486HCN, ENCFF643CGH 943942652 ENCODE Processing Pipeline 80d72ac8988efe22b2732998d4bdb94d https://www.encodeproject.org/files/ENCFF358INR/@@download/ENCFF358INR.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF281SWL bam alignments ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF698SDI 887326201 ENCODE Processing Pipeline 27749d5875a817cc590ade2d42f3f9b5 https://www.encodeproject.org/files/ENCFF281SWL/@@download/ENCFF281SWL.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF235FIH bigWig signal p-value ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF719VXT, ENCFF985NSN 504496426 ENCODE Processing Pipeline 7750a3871d291d7ef3b48a5d6f2b4948 https://www.encodeproject.org/files/ENCFF235FIH/@@download/ENCFF235FIH.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF938BZI bigWig signal p-value ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF281SWL, ENCFF370PSF 551558075 ENCODE Processing Pipeline 756c943308e38c54367dd6ae097bb74b https://www.encodeproject.org/files/ENCFF938BZI/@@download/ENCFF938BZI.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF288XHG bed narrowPeak optimal idr thresholded peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF373LJO, ENCFF382IQD, ENCFF419RSJ, ENCFF748SCA 349182 ENCODE Processing Pipeline 3ee18d24c76c1a17b02151f1b37eb320 https://www.encodeproject.org/files/ENCFF288XHG/@@download/ENCFF288XHG.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF525ALS bigWig fold change over control ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF719VXT, ENCFF985NSN 400881506 ENCODE Processing Pipeline 40085d705b82389a146192eb11044582 https://www.encodeproject.org/files/ENCFF525ALS/@@download/ENCFF525ALS.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF382IQD bed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF281SWL, ENCFF370PSF, ENCFF719VXT, ENCFF985NSN 6797268 ENCODE Processing Pipeline 50e5e85f35cc8b2302016e11dcbbac56 https://www.encodeproject.org/files/ENCFF382IQD/@@download/ENCFF382IQD.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF511WBU bigBed narrowPeak optimal idr thresholded peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF288XHG 747268 ENCODE Processing Pipeline 2d10ffb8c1abc937b8cf1d3ba8949b08 https://www.encodeproject.org/files/ENCFF511WBU/@@download/ENCFF511WBU.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF373LJO bed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF281SWL, ENCFF370PSF 6015833 ENCODE Processing Pipeline 7d0ae26dcea6ab0922e1dcedda2af0b3 https://www.encodeproject.org/files/ENCFF373LJO/@@download/ENCFF373LJO.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF550KKZ bigBed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF382IQD 13408296 ENCODE Processing Pipeline ce2137490b7c6a97e2ca2777ebd7d5ec https://www.encodeproject.org/files/ENCFF550KKZ/@@download/ENCFF550KKZ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF214YYS bigWig signal p-value ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF281SWL, ENCFF370PSF, ENCFF719VXT, ENCFF985NSN 872235047 ENCODE Processing Pipeline 8727362ce1287387ef54070b39fb8990 https://www.encodeproject.org/files/ENCFF214YYS/@@download/ENCFF214YYS.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF550ELI bigWig fold change over control ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF281SWL, ENCFF370PSF 548708746 ENCODE Processing Pipeline 93f1349343622fadc63d6d1ae64c54b4 https://www.encodeproject.org/files/ENCFF550ELI/@@download/ENCFF550ELI.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF296QPD bigBed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF748SCA 13306079 ENCODE Processing Pipeline 0505a69940f2ee6487659a55736afec8 https://www.encodeproject.org/files/ENCFF296QPD/@@download/ENCFF296QPD.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF216QTH bigBed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF373LJO 13349244 ENCODE Processing Pipeline a893570a097fc1ec4b64f5db412630a9 https://www.encodeproject.org/files/ENCFF216QTH/@@download/ENCFF216QTH.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF378UBA bigBed narrowPeak conservative idr thresholded peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF516VNN 657830 ENCODE Processing Pipeline 5d9287eb000978e4e81bcec8937715cc https://www.encodeproject.org/files/ENCFF378UBA/@@download/ENCFF378UBA.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF196LYG bigWig fold change over control ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF281SWL, ENCFF370PSF, ENCFF719VXT, ENCFF985NSN 1002072180 ENCODE Processing Pipeline f5ad8d0596f5277c192a3cf8080ef3e6 https://www.encodeproject.org/files/ENCFF196LYG/@@download/ENCFF196LYG.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF748SCA bed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF719VXT, ENCFF985NSN 5548312 ENCODE Processing Pipeline 0a4d37c3a5307ac67892a45893f93cd0 https://www.encodeproject.org/files/ENCFF748SCA/@@download/ENCFF748SCA.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF516VNN bed narrowPeak conservative idr thresholded peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF373LJO, ENCFF382IQD, ENCFF419RSJ, ENCFF748SCA 293462 ENCODE Processing Pipeline 8ffce6c5f9e2c46feb1630ee9ae6f8f4 https://www.encodeproject.org/files/ENCFF516VNN/@@download/ENCFF516VNN.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF116VFP bam unfiltered alignments ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 50 ENCFF486HCN, ENCFF807MUK 940220270 ENCODE Processing Pipeline b5f122e6688bb0b6052e55f3b6aa6c4b https://www.encodeproject.org/files/ENCFF116VFP/@@download/ENCFF116VFP.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF064JKD bam alignments ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 50 ENCFF698SDI, ENCFF807MUK 887308523 ENCODE Processing Pipeline d052dfdbbe2641801445ee77a6b13a4a https://www.encodeproject.org/files/ENCFF064JKD/@@download/ENCFF064JKD.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF644FYO bam unfiltered alignments ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 50 ENCFF698SDI, ENCFF807MUK 1221566473 ENCODE Processing Pipeline 416c88a1d9bcdfb33a4556dfda4c895d https://www.encodeproject.org/files/ENCFF644FYO/@@download/ENCFF644FYO.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF894WFR bam alignments ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 50 ENCFF486HCN, ENCFF807MUK 720633794 ENCODE Processing Pipeline 20dafa6ee5d83562e91930a950a81347 https://www.encodeproject.org/files/ENCFF894WFR/@@download/ENCFF894WFR.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF949OLH bigWig fold change over control ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF894WFR 412232772 ENCODE Processing Pipeline 3122331a04ba924b756aacc1c39b1e8a https://www.encodeproject.org/files/ENCFF949OLH/@@download/ENCFF949OLH.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF506HHV bed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF064JKD, ENCFF359TIO, ENCFF894WFR, ENCFF991UTU 6780646 ENCODE Processing Pipeline f4a6a6fc4458ed6363515cfaf2d6cc32 https://www.encodeproject.org/files/ENCFF506HHV/@@download/ENCFF506HHV.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF592OPP bed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF064JKD, ENCFF991UTU 5999715 ENCODE Processing Pipeline a15f38fb65d200a33fec2d4c281babc9 https://www.encodeproject.org/files/ENCFF592OPP/@@download/ENCFF592OPP.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF019HWK bigBed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF592OPP 13321328 ENCODE Processing Pipeline 190fca117da9b59ecccd8f0543247079 https://www.encodeproject.org/files/ENCFF019HWK/@@download/ENCFF019HWK.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF334FKO bed narrowPeak optimal idr thresholded peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF363JNV, ENCFF506HHV, ENCFF592OPP 346822 ENCODE Processing Pipeline c1655be4d3dc99d5b6dc81ee253bcce4 https://www.encodeproject.org/files/ENCFF334FKO/@@download/ENCFF334FKO.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF865UZN bigWig signal p-value ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF064JKD, ENCFF991UTU 575449417 ENCODE Processing Pipeline 6d8a8bf8cb3e9073cb78f833b3e15472 https://www.encodeproject.org/files/ENCFF865UZN/@@download/ENCFF865UZN.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF575IRD bigBed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF363JNV 13316900 ENCODE Processing Pipeline 21bcd0655b3235fde854a55236d01818 https://www.encodeproject.org/files/ENCFF575IRD/@@download/ENCFF575IRD.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF333VPO bigWig signal p-value ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF894WFR 505531038 ENCODE Processing Pipeline 54c62722120cba2ed3518b60759408df https://www.encodeproject.org/files/ENCFF333VPO/@@download/ENCFF333VPO.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF653PTR bigWig signal p-value ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF064JKD, ENCFF359TIO, ENCFF894WFR, ENCFF991UTU 979373204 ENCODE Processing Pipeline 38f317d7fdbfcc62d3b798b9a90c2551 https://www.encodeproject.org/files/ENCFF653PTR/@@download/ENCFF653PTR.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF166NLA bigWig fold change over control ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF064JKD, ENCFF991UTU 530210264 ENCODE Processing Pipeline 98f2fb4013c8255cd9ca5b7f4322d20d https://www.encodeproject.org/files/ENCFF166NLA/@@download/ENCFF166NLA.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF533GQP bigWig fold change over control ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF064JKD, ENCFF359TIO, ENCFF894WFR, ENCFF991UTU 1022013385 ENCODE Processing Pipeline b703a2e02f68479ad823875bde601868 https://www.encodeproject.org/files/ENCFF533GQP/@@download/ENCFF533GQP.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF363JNV bed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF894WFR 5567841 ENCODE Processing Pipeline ed353034eef1a680977248a5723c6883 https://www.encodeproject.org/files/ENCFF363JNV/@@download/ENCFF363JNV.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF872XFA bigBed narrowPeak optimal idr thresholded peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF334FKO 742856 ENCODE Processing Pipeline 326b642539e3339725eb0756e2c6a0c9 https://www.encodeproject.org/files/ENCFF872XFA/@@download/ENCFF872XFA.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF580YDN bed narrowPeak conservative idr thresholded peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF363JNV, ENCFF506HHV, ENCFF592OPP 285930 ENCODE Processing Pipeline 8681b76458203dfdcf6fc3ffca4cd153 https://www.encodeproject.org/files/ENCFF580YDN/@@download/ENCFF580YDN.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF689XTO bigBed narrowPeak peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF506HHV 13381247 ENCODE Processing Pipeline a1841129e255ee80ed2d05424e9b1725 https://www.encodeproject.org/files/ENCFF689XTO/@@download/ENCFF689XTO.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF053WVI bigBed narrowPeak conservative idr thresholded peaks ENCSR893QWP ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF580YDN 645774 ENCODE Processing Pipeline e4b1607cfd268413f9d2b23cb6528abc https://www.encodeproject.org/files/ENCFF053WVI/@@download/ENCFF053WVI.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF002BEY fastq reads ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1335394346 Richard Myers, HAIB 44ed664e27e5574f7b47ffb992c59b2d SRA:SRR5331540 https://www.encodeproject.org/files/ENCFF002BEY/@@download/ENCFF002BEY.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released borderline replicate concordance, low read depth ENCFF002BEZ fastq reads ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1643310064 Richard Myers, HAIB 23c946a2956d3d0df467794080c0db89 SRA:SRR5331539 https://www.encodeproject.org/files/ENCFF002BEZ/@@download/ENCFF002BEZ.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released borderline replicate concordance, low read depth ENCFF892IPP bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ 1117587067 ENCODE Processing Pipeline 469bbc787de0a7cdb4ac1d102414f642 https://www.encodeproject.org/files/ENCFF892IPP/@@download/ENCFF892IPP.bigWig hg19 released borderline replicate concordance, low read depth ENCFF835JQA bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ, ENCFF454ZDW 1429616622 ENCODE Processing Pipeline 6912f95f6ee6cfb20870f9f942b040f1 https://www.encodeproject.org/files/ENCFF835JQA/@@download/ENCFF835JQA.bigWig hg19 released borderline replicate concordance, low read depth ENCFF071BKT bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ 782818948 ENCODE Processing Pipeline 4c932ab0670e1b0c29a3a6031acb829b https://www.encodeproject.org/files/ENCFF071BKT/@@download/ENCFF071BKT.bigWig hg19 released borderline replicate concordance, low read depth ENCFF014XHT bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ, ENCFF454ZDW 1122211304 ENCODE Processing Pipeline ee554d4632a774b72a748547fa97ee0d https://www.encodeproject.org/files/ENCFF014XHT/@@download/ENCFF014XHT.bigWig hg19 released borderline replicate concordance, low read depth ENCFF532CRC bam unfiltered alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BEY, ENCFF643CGH 1452008627 ENCODE Processing Pipeline b8a284ba84a2cdf5178187294a595d58 https://www.encodeproject.org/files/ENCFF532CRC/@@download/ENCFF532CRC.bam GRCh38 released borderline replicate concordance, low read depth ENCFF259XFT bam unfiltered alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BEZ, ENCFF643CGH 1781671958 ENCODE Processing Pipeline 9cd66ccaefdac874bc91eb74273d7155 https://www.encodeproject.org/files/ENCFF259XFT/@@download/ENCFF259XFT.bam GRCh38 released borderline replicate concordance, low read depth ENCFF468LGZ bam alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BEY, ENCFF643CGH 1076580199 ENCODE Processing Pipeline 319d3e1a3272167f9aa0fd056493b8cd https://www.encodeproject.org/files/ENCFF468LGZ/@@download/ENCFF468LGZ.bam GRCh38 released borderline replicate concordance, low read depth ENCFF092TPD bam alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BEZ, ENCFF643CGH 1337530886 ENCODE Processing Pipeline 9fc7b165611d6ecc6255a1df502bcbe2 https://www.encodeproject.org/files/ENCFF092TPD/@@download/ENCFF092TPD.bam GRCh38 released borderline replicate concordance, low read depth ENCFF810WFP bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 975560544 ENCODE Processing Pipeline 723751fe51e72df3dca027e5203800df https://www.encodeproject.org/files/ENCFF810WFP/@@download/ENCFF810WFP.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF166VNH bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092TPD, ENCFF332SVJ, ENCFF709XAA 1116355525 ENCODE Processing Pipeline 7161a5055ce654fe024138522a86286e https://www.encodeproject.org/files/ENCFF166VNH/@@download/ENCFF166VNH.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF923RYI bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF092TPD, ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 1289899098 ENCODE Processing Pipeline 8e0a974ac375fbb6ebeb099c54b14b6a https://www.encodeproject.org/files/ENCFF923RYI/@@download/ENCFF923RYI.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF133JHI bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 647436028 ENCODE Processing Pipeline f8457911b1e2a7d0af38b08dde82cf3c https://www.encodeproject.org/files/ENCFF133JHI/@@download/ENCFF133JHI.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF420RGP bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092TPD, ENCFF332SVJ, ENCFF709XAA 829750645 ENCODE Processing Pipeline f96b98d255e24a845f26bfec494d86a7 https://www.encodeproject.org/files/ENCFF420RGP/@@download/ENCFF420RGP.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF803KNM bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF092TPD, ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 1138898535 ENCODE Processing Pipeline 88cd3852b2de492d6d62086d31dd6915 https://www.encodeproject.org/files/ENCFF803KNM/@@download/ENCFF803KNM.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF502KNP bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF703QQK 11532461 ENCODE Processing Pipeline 6a5703f1a0fd3d32880f3ef711b67c82 https://www.encodeproject.org/files/ENCFF502KNP/@@download/ENCFF502KNP.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF203IYU bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092TPD, ENCFF332SVJ, ENCFF709XAA 5743958 ENCODE Processing Pipeline a1f5c21907d2c7d2a51fd6ba43811b72 https://www.encodeproject.org/files/ENCFF203IYU/@@download/ENCFF203IYU.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF703QQK bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF092TPD, ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 6484414 ENCODE Processing Pipeline cdf0f321a7c2edec1015a64dff75ba9a https://www.encodeproject.org/files/ENCFF703QQK/@@download/ENCFF703QQK.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF098RZO bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 5456078 ENCODE Processing Pipeline a20d08cef41cf34690c4b645a5314f10 https://www.encodeproject.org/files/ENCFF098RZO/@@download/ENCFF098RZO.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF403TAE bed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF098RZO, ENCFF203IYU, ENCFF419RSJ, ENCFF703QQK 126176 ENCODE Processing Pipeline 0a2c23700963d8712529a64a2b3d03a3 https://www.encodeproject.org/files/ENCFF403TAE/@@download/ENCFF403TAE.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF336OBD bigBed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF525FJA 238966 ENCODE Processing Pipeline f4de470438db294ac201c2d6274750aa https://www.encodeproject.org/files/ENCFF336OBD/@@download/ENCFF336OBD.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF368VKS bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF203IYU 11415556 ENCODE Processing Pipeline 3681eb0f110eb7934220c659be3923df https://www.encodeproject.org/files/ENCFF368VKS/@@download/ENCFF368VKS.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF987JYW bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF098RZO 11389644 ENCODE Processing Pipeline 0e6a78c78a589150c55b8151f540cbc6 https://www.encodeproject.org/files/ENCFF987JYW/@@download/ENCFF987JYW.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF525FJA bed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF098RZO, ENCFF203IYU, ENCFF419RSJ, ENCFF703QQK 117052 ENCODE Processing Pipeline 8b402e7dd389473e2aceb4d748390b25 https://www.encodeproject.org/files/ENCFF525FJA/@@download/ENCFF525FJA.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF215QHG bigBed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF403TAE 250408 ENCODE Processing Pipeline 40e68f4ab55965d717cdb0b06ca643e5 https://www.encodeproject.org/files/ENCFF215QHG/@@download/ENCFF215QHG.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF720LMT bam unfiltered alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BEY, ENCFF807MUK 1447815970 ENCODE Processing Pipeline 6814e8707592662994c092169be55ac8 https://www.encodeproject.org/files/ENCFF720LMT/@@download/ENCFF720LMT.bam hg19 released borderline replicate concordance, low read depth ENCFF340QIC bam unfiltered alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BEZ, ENCFF807MUK 1775698457 ENCODE Processing Pipeline d953ff022291348fedaa1ef0577a1cf7 https://www.encodeproject.org/files/ENCFF340QIC/@@download/ENCFF340QIC.bam hg19 released borderline replicate concordance, low read depth ENCFF454ZDW bam alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BEY, ENCFF807MUK 1076764085 ENCODE Processing Pipeline 46509af6c013136bf9607bbb3c664d7f https://www.encodeproject.org/files/ENCFF454ZDW/@@download/ENCFF454ZDW.bam hg19 released borderline replicate concordance, low read depth ENCFF135QBJ bam alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BEZ, ENCFF807MUK 1337498004 ENCODE Processing Pipeline bbc64559ead65b0a38cf866cfd983506 https://www.encodeproject.org/files/ENCFF135QBJ/@@download/ENCFF135QBJ.bam hg19 released borderline replicate concordance, low read depth ENCFF361FQK bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF454ZDW 5521548 ENCODE Processing Pipeline 546f0aed9f7d2c4d9afeb14cb1c1159f https://www.encodeproject.org/files/ENCFF361FQK/@@download/ENCFF361FQK.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF578MMW bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF454ZDW 960690828 ENCODE Processing Pipeline 0ba5ede97c4a4aa8dc0e8f622c337e22 https://www.encodeproject.org/files/ENCFF578MMW/@@download/ENCFF578MMW.bigWig hg19 released borderline replicate concordance, low read depth ENCFF978SSL bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ 5968427 ENCODE Processing Pipeline 25f52f43840b144d07c960e5eafe18e9 https://www.encodeproject.org/files/ENCFF978SSL/@@download/ENCFF978SSL.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF005DDK bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF454ZDW 648062461 ENCODE Processing Pipeline 4c79260ae801b00258be655526aebce5 https://www.encodeproject.org/files/ENCFF005DDK/@@download/ENCFF005DDK.bigWig hg19 released borderline replicate concordance, low read depth ENCFF091ZMV bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF361FQK 11387377 ENCODE Processing Pipeline f5ac11417d1fa0f95641d07bd3a4a0cd https://www.encodeproject.org/files/ENCFF091ZMV/@@download/ENCFF091ZMV.bigBed hg19 released borderline replicate concordance, low read depth ENCFF816IYO bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF978SSL 11431029 ENCODE Processing Pipeline 346a9ffb8cc72a94e02c6e3fc164312a https://www.encodeproject.org/files/ENCFF816IYO/@@download/ENCFF816IYO.bigBed hg19 released borderline replicate concordance, low read depth ENCFF056SCJ bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF843XJF 11518522 ENCODE Processing Pipeline d898b405e3e827caf52d2dc7821c850c https://www.encodeproject.org/files/ENCFF056SCJ/@@download/ENCFF056SCJ.bigBed hg19 released borderline replicate concordance, low read depth ENCFF219DOH bed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF361FQK, ENCFF843XJF, ENCFF978SSL 114020 ENCODE Processing Pipeline 6988bdc10ce774b12b0db425c848158c https://www.encodeproject.org/files/ENCFF219DOH/@@download/ENCFF219DOH.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF961NDZ bigBed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF219DOH 233525 ENCODE Processing Pipeline 56b0639b690a81043a2660176111d419 https://www.encodeproject.org/files/ENCFF961NDZ/@@download/ENCFF961NDZ.bigBed hg19 released borderline replicate concordance, low read depth ENCFF843XJF bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ, ENCFF454ZDW 6501047 ENCODE Processing Pipeline cc4a92f0c29867bfd253d5b2e84101ef https://www.encodeproject.org/files/ENCFF843XJF/@@download/ENCFF843XJF.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF187SDA bigBed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF062ARS 250355 ENCODE Processing Pipeline 6a58ec500f880b172e26bee4e4f709c7 https://www.encodeproject.org/files/ENCFF187SDA/@@download/ENCFF187SDA.bigBed hg19 released borderline replicate concordance, low read depth ENCFF062ARS bed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF361FQK, ENCFF843XJF, ENCFF978SSL 127162 ENCODE Processing Pipeline 169dba7b829155124d33176148608d77 https://www.encodeproject.org/files/ENCFF062ARS/@@download/ENCFF062ARS.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF002BFN fastq reads ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1282863699 Richard Myers, HAIB ee6f9786a4ae9cd0a50de53762bb013c SRA:SRR5338794 https://www.encodeproject.org/files/ENCFF002BFN/@@download/ENCFF002BFN.fastq.gz HiSeq 2000 /files/ENCFF002BFW/ released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF932ZZU fastq reads ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1739137009 Richard Myers, HAIB 9023b30e3662646bae0f20de2d06ce79 SRA:SRR5338795 https://www.encodeproject.org/files/ENCFF932ZZU/@@download/ENCFF932ZZU.fastq.gz HiSeq 2000 /files/ENCFF192IAC/ released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF971HFA bam unfiltered alignments ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFN, ENCFF643CGH 1370741326 ENCODE Processing Pipeline 743ca8ed092877650b2a953b4a2d152a https://www.encodeproject.org/files/ENCFF971HFA/@@download/ENCFF971HFA.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF698NSE bam alignments ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFN, ENCFF643CGH 1034909066 ENCODE Processing Pipeline 684e844609f75d596b0ab5991f6e55b5 https://www.encodeproject.org/files/ENCFF698NSE/@@download/ENCFF698NSE.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF943VWM bam unfiltered alignments ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF807MUK, ENCFF932ZZU 1863381437 ENCODE Processing Pipeline 1ebcc5be503da497ca7cd6ba14f1ddb9 https://www.encodeproject.org/files/ENCFF943VWM/@@download/ENCFF943VWM.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF171JQZ bam unfiltered alignments ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF643CGH, ENCFF932ZZU 1867199919 ENCODE Processing Pipeline 073ddcff1fef5a12c4545b6aabd5aefa https://www.encodeproject.org/files/ENCFF171JQZ/@@download/ENCFF171JQZ.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF856LVF bam unfiltered alignments ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFN, ENCFF807MUK 1368597559 ENCODE Processing Pipeline db23a026af45eefd63939d3bfd1a0222 https://www.encodeproject.org/files/ENCFF856LVF/@@download/ENCFF856LVF.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF086LJZ bam alignments ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFN, ENCFF807MUK 1030025425 ENCODE Processing Pipeline ff112d956ea46eecaf08405d17c4b815 https://www.encodeproject.org/files/ENCFF086LJZ/@@download/ENCFF086LJZ.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF662NBQ bam alignments ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF643CGH, ENCFF932ZZU 1406049840 ENCODE Processing Pipeline 58aae4ae0e9080cbedb9451715d336ef https://www.encodeproject.org/files/ENCFF662NBQ/@@download/ENCFF662NBQ.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF720HIA bam alignments ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF807MUK, ENCFF932ZZU 1401673146 ENCODE Processing Pipeline 30efcdd96c494a1de71659e164c357b2 https://www.encodeproject.org/files/ENCFF720HIA/@@download/ENCFF720HIA.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF874ZET bigWig signal p-value ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 ENCFF154WIU, ENCFF423BBH, ENCFF662NBQ 835071846 ENCODE Processing Pipeline 15f814c426cd1dd9c064adbc526f861e https://www.encodeproject.org/files/ENCFF874ZET/@@download/ENCFF874ZET.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF344SMC bigWig signal p-value ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 ENCFF154WIU, ENCFF423BBH, ENCFF698NSE 658577731 ENCODE Processing Pipeline fb5618dcda3edfc126ac49b7c64bdcad https://www.encodeproject.org/files/ENCFF344SMC/@@download/ENCFF344SMC.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF811MTO bigWig signal p-value ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF154WIU, ENCFF423BBH, ENCFF662NBQ, ENCFF698NSE 1070537373 ENCODE Processing Pipeline f36b612a8f266f28609dced1c442118b https://www.encodeproject.org/files/ENCFF811MTO/@@download/ENCFF811MTO.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF981SHX bigWig fold change over control ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 ENCFF154WIU, ENCFF423BBH, ENCFF662NBQ 656313155 ENCODE Processing Pipeline 3a399f9797784055795f8071f3e63a62 https://www.encodeproject.org/files/ENCFF981SHX/@@download/ENCFF981SHX.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF483RRV bigWig fold change over control ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 ENCFF154WIU, ENCFF423BBH, ENCFF698NSE 547580121 ENCODE Processing Pipeline 9222b57fdaeac4e51eb0c3a6ffeac6bb https://www.encodeproject.org/files/ENCFF483RRV/@@download/ENCFF483RRV.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF861VZC bigWig fold change over control ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF154WIU, ENCFF423BBH, ENCFF662NBQ, ENCFF698NSE 953986518 ENCODE Processing Pipeline 168c1e85dd7be5f4b197a8ba8ca2965a https://www.encodeproject.org/files/ENCFF861VZC/@@download/ENCFF861VZC.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF486GLA bigBed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 ENCFF602ZVQ 10965195 ENCODE Processing Pipeline cc4ef549fc9b088c709c0cfbebf4a968 https://www.encodeproject.org/files/ENCFF486GLA/@@download/ENCFF486GLA.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF726PZE bigBed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 ENCFF016ZSU 11215357 ENCODE Processing Pipeline 0fea52afbe170187f2b5bafc9c9586a4 https://www.encodeproject.org/files/ENCFF726PZE/@@download/ENCFF726PZE.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF697YQI bigBed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF514DIZ 13634308 ENCODE Processing Pipeline 6a0b5af237494d1533142e3c9dd2471d https://www.encodeproject.org/files/ENCFF697YQI/@@download/ENCFF697YQI.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF016ZSU bed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 ENCFF154WIU, ENCFF423BBH, ENCFF662NBQ 5719950 ENCODE Processing Pipeline d015cee85816b93b2975583e0722e49b https://www.encodeproject.org/files/ENCFF016ZSU/@@download/ENCFF016ZSU.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF602ZVQ bed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 ENCFF154WIU, ENCFF423BBH, ENCFF698NSE 4858450 ENCODE Processing Pipeline 9e373ec32bbeb1f53fba4567f1b2ff32 https://www.encodeproject.org/files/ENCFF602ZVQ/@@download/ENCFF602ZVQ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF514DIZ bed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF154WIU, ENCFF423BBH, ENCFF662NBQ, ENCFF698NSE 6221164 ENCODE Processing Pipeline caf3d4b3a3e58e3de161f28637c667d6 https://www.encodeproject.org/files/ENCFF514DIZ/@@download/ENCFF514DIZ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF555ECR bed narrowPeak conservative idr thresholded peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016ZSU, ENCFF419RSJ, ENCFF514DIZ, ENCFF602ZVQ 152503 ENCODE Processing Pipeline 64007b07ddad7c378f11c18336b5ebee https://www.encodeproject.org/files/ENCFF555ECR/@@download/ENCFF555ECR.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF360NHM bigBed narrowPeak conservative idr thresholded peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF555ECR 344029 ENCODE Processing Pipeline 2d60555aed6a070e6e04c8f22802262a https://www.encodeproject.org/files/ENCFF360NHM/@@download/ENCFF360NHM.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF152RNE bed narrowPeak optimal idr thresholded peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016ZSU, ENCFF419RSJ, ENCFF514DIZ, ENCFF602ZVQ 180973 ENCODE Processing Pipeline 015284dbf41a9e9ef2baac67bc49e860 https://www.encodeproject.org/files/ENCFF152RNE/@@download/ENCFF152RNE.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF711EAY bigBed narrowPeak optimal idr thresholded peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF152RNE 386604 ENCODE Processing Pipeline d8498c24524a2e84c1909aed885f2ee6 https://www.encodeproject.org/files/ENCFF711EAY/@@download/ENCFF711EAY.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF238MQA bigWig signal p-value ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 ENCFF720HIA, ENCFF943IIV, ENCFF991WDT 701734324 ENCODE Processing Pipeline b14ecc077c51a682c18ada1dd7cbe1cf https://www.encodeproject.org/files/ENCFF238MQA/@@download/ENCFF238MQA.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF776DVS bigWig signal p-value ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 ENCFF086LJZ, ENCFF943IIV, ENCFF991WDT 821683753 ENCODE Processing Pipeline abb00bf954decaef2f0d30867e494096 https://www.encodeproject.org/files/ENCFF776DVS/@@download/ENCFF776DVS.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF575CHF bigWig fold change over control ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 ENCFF720HIA, ENCFF943IIV, ENCFF991WDT 664102822 ENCODE Processing Pipeline 361bd063df7d5d35bf68760a7f15ad2d https://www.encodeproject.org/files/ENCFF575CHF/@@download/ENCFF575CHF.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF675KLX bigWig signal p-value ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086LJZ, ENCFF720HIA, ENCFF943IIV, ENCFF991WDT 823843282 ENCODE Processing Pipeline cd67c10358ccf5445d43b44be110a293 https://www.encodeproject.org/files/ENCFF675KLX/@@download/ENCFF675KLX.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF965HNY bigWig fold change over control ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 ENCFF086LJZ, ENCFF943IIV, ENCFF991WDT 563769193 ENCODE Processing Pipeline e74a580878567b179c2195fc2e1c63a7 https://www.encodeproject.org/files/ENCFF965HNY/@@download/ENCFF965HNY.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF758RBF bigWig fold change over control ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086LJZ, ENCFF720HIA, ENCFF943IIV, ENCFF991WDT 970063366 ENCODE Processing Pipeline e582a8bb25c2b7dfa5110d1cf9f6b58c https://www.encodeproject.org/files/ENCFF758RBF/@@download/ENCFF758RBF.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF508MRO bed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 ENCFF720HIA, ENCFF943IIV, ENCFF991WDT 5612436 ENCODE Processing Pipeline 9873663b99886607e58e6da699e5d349 https://www.encodeproject.org/files/ENCFF508MRO/@@download/ENCFF508MRO.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF607MBL bigBed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF988AWI 13616928 ENCODE Processing Pipeline fe54c2b6c96dfda5617816fcc0333263 https://www.encodeproject.org/files/ENCFF607MBL/@@download/ENCFF607MBL.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF988AWI bed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086LJZ, ENCFF720HIA, ENCFF943IIV, ENCFF991WDT 6222053 ENCODE Processing Pipeline b4ce00040b0b3955fd0c12c05b64bac0 https://www.encodeproject.org/files/ENCFF988AWI/@@download/ENCFF988AWI.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF925ZGX bed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 ENCFF086LJZ, ENCFF943IIV, ENCFF991WDT 4985334 ENCODE Processing Pipeline 977767272dab7b9267fce5f771334049 https://www.encodeproject.org/files/ENCFF925ZGX/@@download/ENCFF925ZGX.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF817AOQ bed narrowPeak conservative idr thresholded peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF508MRO, ENCFF925ZGX, ENCFF988AWI 151146 ENCODE Processing Pipeline d6f30f82bca591b0adba46bb845d147f https://www.encodeproject.org/files/ENCFF817AOQ/@@download/ENCFF817AOQ.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF658YKK bigBed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 2 ENCFF925ZGX 11011877 ENCODE Processing Pipeline 86477f4de5e9c7977e928ff75ba839a3 https://www.encodeproject.org/files/ENCFF658YKK/@@download/ENCFF658YKK.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF946CVP bigBed narrowPeak peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1 ENCFF508MRO 11180708 ENCODE Processing Pipeline a4ca167eb67046da5c51057f020a6a5a https://www.encodeproject.org/files/ENCFF946CVP/@@download/ENCFF946CVP.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF448TPQ bigBed narrowPeak conservative idr thresholded peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF817AOQ 341895 ENCODE Processing Pipeline e9ece4c85cf5f09d27142a617b2a5f16 https://www.encodeproject.org/files/ENCFF448TPQ/@@download/ENCFF448TPQ.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF305ICK bed narrowPeak optimal idr thresholded peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF508MRO, ENCFF925ZGX, ENCFF988AWI 177224 ENCODE Processing Pipeline a4d821726cb81b6e654150bb39ba9b05 https://www.encodeproject.org/files/ENCFF305ICK/@@download/ENCFF305ICK.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF116JVL bigBed narrowPeak optimal idr thresholded peaks ENCSR501DKS ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF7-human ENCAB000ACR DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF305ICK 380278 ENCODE Processing Pipeline 810070e9f8834f396460797acc9ac1b4 https://www.encodeproject.org/files/ENCFF116JVL/@@download/ENCFF116JVL.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF000OSV bigBed broadPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCG 456168 Richard Myers, HAIB 2056230c30c1fa534fd0fa7fef791701 https://www.encodeproject.org/files/ENCFF000OSV/@@download/ENCFF000OSV.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OSW bigBed broadPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCH 202061 Richard Myers, HAIB a3db2ef21c487ed5046b7fcf7f4780ed https://www.encodeproject.org/files/ENCFF000OSW/@@download/ENCFF000OSW.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OSY bam alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OTG 713450502 Richard Myers, HAIB 4516d0b9989b407bbbc63fb776620daf https://www.encodeproject.org/files/ENCFF000OSY/@@download/ENCFF000OSY.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OSZ bigWig raw signal ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 7259145 Richard Myers, HAIB 3c179105dce5c80edd440f1d11cdc02f https://www.encodeproject.org/files/ENCFF000OSZ/@@download/ENCFF000OSZ.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OTA bam alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OTJ 821526589 Richard Myers, HAIB c90bcbff66481a8affd9e0ffe95be976 https://www.encodeproject.org/files/ENCFF000OTA/@@download/ENCFF000OTA.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OTB bigWig raw signal ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 4281132 Richard Myers, HAIB 5611043b224e5e35f65699196aa4b094 https://www.encodeproject.org/files/ENCFF000OTB/@@download/ENCFF000OTB.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OTG fastq reads ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 688119781 Richard Myers, HAIB 92385d00eaf98e0d9e743b2162ee7dbb https://www.encodeproject.org/files/ENCFF000OTG/@@download/ENCFF000OTG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OTJ fastq reads ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 900184322 Richard Myers, HAIB 389c7ea0d039c5f4a1f020945f02f9da https://www.encodeproject.org/files/ENCFF000OTJ/@@download/ENCFF000OTJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UCG bed broadPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 249070 Richard Myers, HAIB 1996552e6305ea2908cba26b4ed38919 https://www.encodeproject.org/files/ENCFF001UCG/@@download/ENCFF001UCG.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UCH bed broadPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 89033 Richard Myers, HAIB 0754af5e6ddf8fc746f462576473fa67 https://www.encodeproject.org/files/ENCFF001UCH/@@download/ENCFF001UCH.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CJI bed narrowPeak optimal idr thresholded peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 172732 ENCODE Consortium Analysis Working Group b61359273fea3d424d3f5c67bf8bde7c https://www.encodeproject.org/files/ENCFF002CJI/@@download/ENCFF002CJI.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF115UDH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE ENCFF002CJI 368656 ENCODE Consortium 20b3ff6a73637d4789f113db14d75223 https://www.encodeproject.org/files/ENCFF115UDH/@@download/ENCFF115UDH.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF789OGM bam alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTG, ENCFF643CGH 539554730 ENCODE Processing Pipeline 8225bfb8ae576ed700c16205fc03aee5 https://www.encodeproject.org/files/ENCFF789OGM/@@download/ENCFF789OGM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF785GXZ bam unfiltered alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTG, ENCFF643CGH 890299274 ENCODE Processing Pipeline f76e55ce2b3fe340ee02a8fe312294ea https://www.encodeproject.org/files/ENCFF785GXZ/@@download/ENCFF785GXZ.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF967DJP bam unfiltered alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTJ, ENCFF643CGH 1154517853 ENCODE Processing Pipeline c9a6b2d13b8d926e182c2050307d16bb https://www.encodeproject.org/files/ENCFF967DJP/@@download/ENCFF967DJP.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF256XXT bam alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTJ, ENCFF643CGH 640281325 ENCODE Processing Pipeline 0297005a2213e6cb3f0ecd7554d3a3ea https://www.encodeproject.org/files/ENCFF256XXT/@@download/ENCFF256XXT.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF229BBD bam unfiltered alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTG, ENCFF807MUK 887497451 ENCODE Processing Pipeline 80680f4ebbcfb7ac95f2bf9ea6993528 https://www.encodeproject.org/files/ENCFF229BBD/@@download/ENCFF229BBD.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF036SLY bam alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTG, ENCFF807MUK 540000768 ENCODE Processing Pipeline 1c9a913585ae4a2dfcb4e3c2b19ce673 https://www.encodeproject.org/files/ENCFF036SLY/@@download/ENCFF036SLY.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF870KIH bam unfiltered alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTJ, ENCFF807MUK 1150231153 ENCODE Processing Pipeline 3eb1dbfb72e7d2e2aca7d890a6c5f55e https://www.encodeproject.org/files/ENCFF870KIH/@@download/ENCFF870KIH.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF655DGW bam alignments ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTJ, ENCFF807MUK 640669427 ENCODE Processing Pipeline b915f87e4f63b986545fee9e47b2fe4b https://www.encodeproject.org/files/ENCFF655DGW/@@download/ENCFF655DGW.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF978XDR bigWig signal p-value ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF789OGM, ENCFF948LKH 373920360 ENCODE Processing Pipeline b2bd6ea77ec0a51d8875e15388f23e2f https://www.encodeproject.org/files/ENCFF978XDR/@@download/ENCFF978XDR.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF677NOB bigWig signal p-value ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF256XXT, ENCFF948LKH 382403982 ENCODE Processing Pipeline b562c56d8214659e4b926807854ed169 https://www.encodeproject.org/files/ENCFF677NOB/@@download/ENCFF677NOB.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF503MAL bigWig fold change over control ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF256XXT, ENCFF948LKH 294479432 ENCODE Processing Pipeline 35179cfaea03f52e0c38e9ff52c114ad https://www.encodeproject.org/files/ENCFF503MAL/@@download/ENCFF503MAL.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF391GAP bigWig signal p-value ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF256XXT, ENCFF789OGM, ENCFF948LKH 539284123 ENCODE Processing Pipeline 9024ee9180d213f515dbc01241ba2508 https://www.encodeproject.org/files/ENCFF391GAP/@@download/ENCFF391GAP.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF765MSW bed narrowPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF789OGM, ENCFF948LKH 4975211 ENCODE Processing Pipeline 36010b7f7ddc60df26e3a0f34136fa0d https://www.encodeproject.org/files/ENCFF765MSW/@@download/ENCFF765MSW.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF311YLU bed narrowPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF256XXT, ENCFF789OGM, ENCFF948LKH 5216903 ENCODE Processing Pipeline 2faaca3e048ce70b4f622f1be6cf7fe5 https://www.encodeproject.org/files/ENCFF311YLU/@@download/ENCFF311YLU.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF571JNW bigWig fold change over control ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF256XXT, ENCFF789OGM, ENCFF948LKH 484465781 ENCODE Processing Pipeline 5452aabe4742816f9019782ed850bb15 https://www.encodeproject.org/files/ENCFF571JNW/@@download/ENCFF571JNW.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF597PUI bed narrowPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF256XXT, ENCFF948LKH 3955836 ENCODE Processing Pipeline f5359ecf2927156164bc5549583fc6bb https://www.encodeproject.org/files/ENCFF597PUI/@@download/ENCFF597PUI.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF493PHE bigBed narrowPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF597PUI 8356000 ENCODE Processing Pipeline b3eb83ea0e803fe37a88b8d0b4bf4e87 https://www.encodeproject.org/files/ENCFF493PHE/@@download/ENCFF493PHE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF080NJX bigWig fold change over control ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF789OGM, ENCFF948LKH 251706357 ENCODE Processing Pipeline 325474e27f611a14f1a587333dd05f86 https://www.encodeproject.org/files/ENCFF080NJX/@@download/ENCFF080NJX.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF528MBF bigBed narrowPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF765MSW 12845819 ENCODE Processing Pipeline 64830f0e639ca35e26783ac724aa76d4 https://www.encodeproject.org/files/ENCFF528MBF/@@download/ENCFF528MBF.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF905VZD bed narrowPeak optimal idr thresholded peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF311YLU, ENCFF419RSJ, ENCFF597PUI, ENCFF765MSW 244137 ENCODE Processing Pipeline 9df45f832a076cb13dc3852def56f03c https://www.encodeproject.org/files/ENCFF905VZD/@@download/ENCFF905VZD.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF280FJD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF905VZD 469613 ENCODE Processing Pipeline cabe874308877d1baf1c21688898073b https://www.encodeproject.org/files/ENCFF280FJD/@@download/ENCFF280FJD.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF818XLY bigBed narrowPeak peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF311YLU 11236874 ENCODE Processing Pipeline a5a657d9cddf213799eb508944fe9cfb https://www.encodeproject.org/files/ENCFF818XLY/@@download/ENCFF818XLY.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF968ZBM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF963KTA 338901 ENCODE Processing Pipeline d1dbab14cd587076e8a217c95d972003 https://www.encodeproject.org/files/ENCFF968ZBM/@@download/ENCFF968ZBM.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF963KTA bed narrowPeak conservative idr thresholded peaks ENCSR000BIS ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF311YLU, ENCFF419RSJ, ENCFF597PUI, ENCFF765MSW 154436 ENCODE Processing Pipeline 9c22531b74ac063e151f3d96d41bbbbf https://www.encodeproject.org/files/ENCFF963KTA/@@download/ENCFF963KTA.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OVW bam alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OWE 723115595 Richard Myers, HAIB 89f5636caa7190fa132975010bef2966 https://www.encodeproject.org/files/ENCFF000OVW/@@download/ENCFF000OVW.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OVX bigBed broadPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UDA 563182 Richard Myers, HAIB efa0f6b2df66adc4a40acc86179bc96e https://www.encodeproject.org/files/ENCFF000OVX/@@download/ENCFF000OVX.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OVY bigBed broadPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UDB 769593 Richard Myers, HAIB 56a43dc2f38d31c6ceae239160c42cea https://www.encodeproject.org/files/ENCFF000OVY/@@download/ENCFF000OVY.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OVZ bam alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OWL 576058113 Richard Myers, HAIB de26ab4f1478eed2f297f18c169969fa https://www.encodeproject.org/files/ENCFF000OVZ/@@download/ENCFF000OVZ.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OWB bigWig raw signal ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 13093049 Richard Myers, HAIB 010302eeb7441bf9dd807a7c82ef1dfc https://www.encodeproject.org/files/ENCFF000OWB/@@download/ENCFF000OWB.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OWC bigWig raw signal ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 16608340 Richard Myers, HAIB 7bf1ac23475b9215c8156dd80de3d97b https://www.encodeproject.org/files/ENCFF000OWC/@@download/ENCFF000OWC.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OWE fastq reads ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 692915811 Richard Myers, HAIB 193799cc5d08e710b4e091fea90abaf6 https://www.encodeproject.org/files/ENCFF000OWE/@@download/ENCFF000OWE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth biological replicates with identical biosample ENCFF000OWL fastq reads ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 651671705 Richard Myers, HAIB 7b71c01117da2960e808150b98a13fc5 https://www.encodeproject.org/files/ENCFF000OWL/@@download/ENCFF000OWL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth biological replicates with identical biosample ENCFF001UDA bed broadPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 385731 Richard Myers, HAIB c38e5ab6677386a69c3ab19e7d20852c https://www.encodeproject.org/files/ENCFF001UDA/@@download/ENCFF001UDA.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UDB bed broadPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 419256 Richard Myers, HAIB 94d38a584335e63918a95d5703b2eacb https://www.encodeproject.org/files/ENCFF001UDB/@@download/ENCFF001UDB.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CJS bed narrowPeak optimal idr thresholded peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 507608 ENCODE Consortium Analysis Working Group 5ae1a553c320884a6b9f7f1447a88d93 https://www.encodeproject.org/files/ENCFF002CJS/@@download/ENCFF002CJS.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF167CHE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE ENCFF002CJS 991415 ENCODE Consortium abff8e46a3d78245caa00881a47eed67 https://www.encodeproject.org/files/ENCFF167CHE/@@download/ENCFF167CHE.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF576SZW bam unfiltered alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OWE, ENCFF643CGH 894316288 ENCODE Processing Pipeline 9ff4b9915bef38cf3467c73a0a01e9b4 https://www.encodeproject.org/files/ENCFF576SZW/@@download/ENCFF576SZW.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF606OTI bam alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OWE, ENCFF643CGH 543595801 ENCODE Processing Pipeline 5b9b482e8b6150aa36d3ba4abf411874 https://www.encodeproject.org/files/ENCFF606OTI/@@download/ENCFF606OTI.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF589RCU bam unfiltered alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OWL, ENCFF643CGH 870519099 ENCODE Processing Pipeline ceeb75ddf60779453e616b111d053fd8 https://www.encodeproject.org/files/ENCFF589RCU/@@download/ENCFF589RCU.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF553NXK bam alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OWL, ENCFF643CGH 540872914 ENCODE Processing Pipeline ca27b9e25ddc9a9cd3b553585b325238 https://www.encodeproject.org/files/ENCFF553NXK/@@download/ENCFF553NXK.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF319RMX bam alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OWE, ENCFF807MUK 543967087 ENCODE Processing Pipeline 3d3c21529f02d4a7b5cb8a26189ee65e https://www.encodeproject.org/files/ENCFF319RMX/@@download/ENCFF319RMX.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF093BZZ bam unfiltered alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OWE, ENCFF807MUK 891591307 ENCODE Processing Pipeline 57dcfe24d7b2b1842ff9a9ac964619a0 https://www.encodeproject.org/files/ENCFF093BZZ/@@download/ENCFF093BZZ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF959KAI bam unfiltered alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OWL, ENCFF807MUK 867575802 ENCODE Processing Pipeline 4b2dd7f6830c6fab0d07ac4d236774cb https://www.encodeproject.org/files/ENCFF959KAI/@@download/ENCFF959KAI.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF410CQF bam alignments ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OWL, ENCFF807MUK 541217998 ENCODE Processing Pipeline 5da80a733e224b5b834d1f4f0345674e https://www.encodeproject.org/files/ENCFF410CQF/@@download/ENCFF410CQF.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF590SWX bigWig signal p-value ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF606OTI, ENCFF948LKH 474473572 ENCODE Processing Pipeline f68eecf92f5c055e43b32cc842ade045 https://www.encodeproject.org/files/ENCFF590SWX/@@download/ENCFF590SWX.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF516AHS bigWig signal p-value ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF553NXK, ENCFF606OTI, ENCFF948LKH 496474404 ENCODE Processing Pipeline 7a022aed44049ea05aa2ea7434cd4192 https://www.encodeproject.org/files/ENCFF516AHS/@@download/ENCFF516AHS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF477FIC bigWig signal p-value ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF553NXK, ENCFF948LKH 463350698 ENCODE Processing Pipeline 483065e7df2b87fc0bd0d2f103100047 https://www.encodeproject.org/files/ENCFF477FIC/@@download/ENCFF477FIC.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF511BGE bigWig fold change over control ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF606OTI, ENCFF948LKH 256461609 ENCODE Processing Pipeline 040bd0b5eff28078c65926a9698d46f0 https://www.encodeproject.org/files/ENCFF511BGE/@@download/ENCFF511BGE.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF708QRS bigWig fold change over control ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF553NXK, ENCFF948LKH 285818102 ENCODE Processing Pipeline 8640c2d50fe02c55980864138a62f0a9 https://www.encodeproject.org/files/ENCFF708QRS/@@download/ENCFF708QRS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF133IZI bigWig fold change over control ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF553NXK, ENCFF606OTI, ENCFF948LKH 463308130 ENCODE Processing Pipeline ba9de76012062e7dc354671ec3a74ea4 https://www.encodeproject.org/files/ENCFF133IZI/@@download/ENCFF133IZI.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF538TMU bed narrowPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF606OTI, ENCFF948LKH 4148309 ENCODE Processing Pipeline bd2b705ce46f1b769f385adc68270fe0 https://www.encodeproject.org/files/ENCFF538TMU/@@download/ENCFF538TMU.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF255IQC bed narrowPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF553NXK, ENCFF606OTI, ENCFF948LKH 5155597 ENCODE Processing Pipeline 92418fdbf95707807bba1f332fdd7466 https://www.encodeproject.org/files/ENCFF255IQC/@@download/ENCFF255IQC.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF567TGY bigBed narrowPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF538TMU 8453104 ENCODE Processing Pipeline f7b75f3f25eec6809bea78025c34bccf https://www.encodeproject.org/files/ENCFF567TGY/@@download/ENCFF567TGY.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF494WMB bed narrowPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF553NXK, ENCFF948LKH 4490419 ENCODE Processing Pipeline 43103881fc103f1b73998ac63ff85d04 https://www.encodeproject.org/files/ENCFF494WMB/@@download/ENCFF494WMB.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF639CHT bigBed narrowPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF494WMB 10791871 ENCODE Processing Pipeline ad7daaf654f0727d282f931dc69ad32f https://www.encodeproject.org/files/ENCFF639CHT/@@download/ENCFF639CHT.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF770USX bed narrowPeak conservative idr thresholded peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF255IQC, ENCFF419RSJ, ENCFF494WMB, ENCFF538TMU 514742 ENCODE Processing Pipeline 3253d90c197c487ef4d5e13d27992af1 https://www.encodeproject.org/files/ENCFF770USX/@@download/ENCFF770USX.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF589OPI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF770USX 983064 ENCODE Processing Pipeline 18195826a443b5784f11e158c4b7129b https://www.encodeproject.org/files/ENCFF589OPI/@@download/ENCFF589OPI.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF024TQE bigBed narrowPeak peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF255IQC 11502126 ENCODE Processing Pipeline 5a19c1650e4a04e79e69723f865e02bc https://www.encodeproject.org/files/ENCFF024TQE/@@download/ENCFF024TQE.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF699HXL bed narrowPeak optimal idr thresholded peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF255IQC, ENCFF419RSJ, ENCFF494WMB, ENCFF538TMU 534069 ENCODE Processing Pipeline e0651aa4696007dd00ff5a3d9c993f46 https://www.encodeproject.org/files/ENCFF699HXL/@@download/ENCFF699HXL.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF735SNM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIU ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF699HXL 1011242 ENCODE Processing Pipeline 60272bf5838c70a80305d7d73aa7bc8d https://www.encodeproject.org/files/ENCFF735SNM/@@download/ENCFF735SNM.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF001RUJ fastq reads ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1345596780 Richard Myers, HAIB e694beea040d38d80927ddcade0b2921 SRA:SRR5331592 https://www.encodeproject.org/files/ENCFF001RUJ/@@download/ENCFF001RUJ.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption, low read depth ENCFF001RUN fastq reads ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1805177072 Richard Myers, HAIB 6697eb0cf1ef6f7cb088e730b72bff7d SRA:SRR5331593 https://www.encodeproject.org/files/ENCFF001RUN/@@download/ENCFF001RUN.fastq.gz HiSeq 2000 /files/ENCFF001RVP/ released antibody characterized with exemption, low read depth ENCFF395SCA bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF001RUN, ENCFF807MUK 1443391646 ENCODE Processing Pipeline 5f6584251153262f49201dc8121e3b05 https://www.encodeproject.org/files/ENCFF395SCA/@@download/ENCFF395SCA.bam hg19 released antibody characterized with exemption, low read depth ENCFF545MBO bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF001RUJ, ENCFF807MUK 1066478481 ENCODE Processing Pipeline 686787c7d09a8992f3636a6cde1915b7 https://www.encodeproject.org/files/ENCFF545MBO/@@download/ENCFF545MBO.bam hg19 released antibody characterized with exemption, low read depth ENCFF633MKO bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF727QOD 708234187 ENCODE Processing Pipeline 9295d1a2afbf679f8bd82315a06cbfc1 https://www.encodeproject.org/files/ENCFF633MKO/@@download/ENCFF633MKO.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF243WKQ bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF103CZU, ENCFF578ISP 792970952 ENCODE Processing Pipeline 0719bd09b378b24180ed8dc0b23634ac https://www.encodeproject.org/files/ENCFF243WKQ/@@download/ENCFF243WKQ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF399JNI bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF103CZU, ENCFF578ISP, ENCFF727QOD 1317915506 ENCODE Processing Pipeline adcc20d6513c79088fd8f99711e4d396 https://www.encodeproject.org/files/ENCFF399JNI/@@download/ENCFF399JNI.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF139HBD bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF103CZU, ENCFF578ISP 685829961 ENCODE Processing Pipeline 61d486b18c429bee7a68c9afcb2d53ad https://www.encodeproject.org/files/ENCFF139HBD/@@download/ENCFF139HBD.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF463HBH bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF727QOD 528043841 ENCODE Processing Pipeline 487169747281e9238754f3380d38b7f6 https://www.encodeproject.org/files/ENCFF463HBH/@@download/ENCFF463HBH.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF557POT bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF103CZU, ENCFF578ISP, ENCFF727QOD 1341401762 ENCODE Processing Pipeline 55bb7b18e471d1e4efa7e5c5fec1c196 https://www.encodeproject.org/files/ENCFF557POT/@@download/ENCFF557POT.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF545NPE bam unfiltered alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUN, ENCFF643CGH 1917593587 ENCODE Processing Pipeline b2a400317e53b99d69d2e38e726d1cfe https://www.encodeproject.org/files/ENCFF545NPE/@@download/ENCFF545NPE.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF570ZZQ bam unfiltered alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUJ, ENCFF643CGH 1425472229 ENCODE Processing Pipeline 2377c56c8e4bff0af870f15daf953a34 https://www.encodeproject.org/files/ENCFF570ZZQ/@@download/ENCFF570ZZQ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF198RTF bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUJ, ENCFF643CGH 1065977334 ENCODE Processing Pipeline 5e98e891be510094f52f76644ba9dd2d https://www.encodeproject.org/files/ENCFF198RTF/@@download/ENCFF198RTF.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF187ZET bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUN, ENCFF643CGH 1442824719 ENCODE Processing Pipeline d56c9d197ccfb5bcb1bd72ded2c2a63b https://www.encodeproject.org/files/ENCFF187ZET/@@download/ENCFF187ZET.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF503MKK bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF187ZET 749423840 ENCODE Processing Pipeline 50781091932cb3aa5c8f29c8017e32d1 https://www.encodeproject.org/files/ENCFF503MKK/@@download/ENCFF503MKK.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF334NQI bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF198RTF, ENCFF332SVJ 723957946 ENCODE Processing Pipeline 1e845449120d282e93d3ef1cf64fdd0b https://www.encodeproject.org/files/ENCFF334NQI/@@download/ENCFF334NQI.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF819ZDX bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF187ZET, ENCFF198RTF, ENCFF332SVJ 1317457246 ENCODE Processing Pipeline b852dd5bdff8afbaf871030be3b98c2a https://www.encodeproject.org/files/ENCFF819ZDX/@@download/ENCFF819ZDX.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF365EHJ bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF187ZET 668800142 ENCODE Processing Pipeline 9d79b746073f385f8c5b6f25333e75be https://www.encodeproject.org/files/ENCFF365EHJ/@@download/ENCFF365EHJ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF607GBG bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF198RTF, ENCFF332SVJ 532674576 ENCODE Processing Pipeline 374c898175afafe4a7274055125f9c07 https://www.encodeproject.org/files/ENCFF607GBG/@@download/ENCFF607GBG.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF115ALQ bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF187ZET, ENCFF198RTF, ENCFF332SVJ 1340619794 ENCODE Processing Pipeline a96337a6ef7ebac161d129f837dab035 https://www.encodeproject.org/files/ENCFF115ALQ/@@download/ENCFF115ALQ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF710SZC bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF882SPG 11378532 ENCODE Processing Pipeline e6ae83a74193e3e45b96da1c26ad433c https://www.encodeproject.org/files/ENCFF710SZC/@@download/ENCFF710SZC.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF882SPG bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF187ZET 5572049 ENCODE Processing Pipeline 8ed5f312510237898a4738a68929e967 https://www.encodeproject.org/files/ENCFF882SPG/@@download/ENCFF882SPG.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF710ZCP bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF198RTF, ENCFF332SVJ 5432172 ENCODE Processing Pipeline 9e5955d134101cef2ce371de4277f59c https://www.encodeproject.org/files/ENCFF710ZCP/@@download/ENCFF710ZCP.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF136HBK bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF710ZCP 11210590 ENCODE Processing Pipeline 79bdd23ac5c06a489495e0a1fa39449a https://www.encodeproject.org/files/ENCFF136HBK/@@download/ENCFF136HBK.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF798UGB bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF789EHD 11590772 ENCODE Processing Pipeline 5a83db92a091c25359e3be228c7ebbae https://www.encodeproject.org/files/ENCFF798UGB/@@download/ENCFF798UGB.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF789EHD bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF187ZET, ENCFF198RTF, ENCFF332SVJ 6486284 ENCODE Processing Pipeline df9a0a4c79bf348e5f98e0e651103fa7 https://www.encodeproject.org/files/ENCFF789EHD/@@download/ENCFF789EHD.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF370EVX bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF312XHI 912088 ENCODE Processing Pipeline 5de7fd6ee5fe01ad253d7f2f1cb43dba https://www.encodeproject.org/files/ENCFF370EVX/@@download/ENCFF370EVX.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF145JGI bed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF710ZCP, ENCFF789EHD, ENCFF882SPG 443904 ENCODE Processing Pipeline 410cab9475562ecb0983a3868f1dbe82 https://www.encodeproject.org/files/ENCFF145JGI/@@download/ENCFF145JGI.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF804SVP bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF145JGI 847483 ENCODE Processing Pipeline 3a8da997a24413d67093ad5893d0e3d8 https://www.encodeproject.org/files/ENCFF804SVP/@@download/ENCFF804SVP.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF312XHI bed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF710ZCP, ENCFF789EHD, ENCFF882SPG 496400 ENCODE Processing Pipeline e9f3b1cbd2dddf9944661d8825db571a https://www.encodeproject.org/files/ENCFF312XHI/@@download/ENCFF312XHI.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF665SBO bam unfiltered alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUJ, ENCFF807MUK 1422918713 ENCODE Processing Pipeline dbdba334bdecee65575eaa7319c5b622 https://www.encodeproject.org/files/ENCFF665SBO/@@download/ENCFF665SBO.bam hg19 released antibody characterized with exemption, low read depth ENCFF623HFK bam unfiltered alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUN, ENCFF807MUK 1913456268 ENCODE Processing Pipeline 565e56d079158a06a9a01335eb2df338 https://www.encodeproject.org/files/ENCFF623HFK/@@download/ENCFF623HFK.bam hg19 released antibody characterized with exemption, low read depth ENCFF727QOD bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUJ, ENCFF807MUK 1066478509 ENCODE Processing Pipeline 8861d827b4a30e606583ca8c7b9c05ed https://www.encodeproject.org/files/ENCFF727QOD/@@download/ENCFF727QOD.bam hg19 released antibody characterized with exemption, low read depth ENCFF103CZU bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUN, ENCFF807MUK 1443391674 ENCODE Processing Pipeline c74c7ca7e3c86fce1221bad9bf2922f4 https://www.encodeproject.org/files/ENCFF103CZU/@@download/ENCFF103CZU.bam hg19 released antibody characterized with exemption, low read depth ENCFF813HVG bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF103CZU, ENCFF578ISP, ENCFF727QOD 6490731 ENCODE Processing Pipeline 45b800c16bc87fd82dee37aacac4f078 https://www.encodeproject.org/files/ENCFF813HVG/@@download/ENCFF813HVG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF590LFF bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF803FZY 11382659 ENCODE Processing Pipeline 910174e2600d8985b716d6b4f3caf6a0 https://www.encodeproject.org/files/ENCFF590LFF/@@download/ENCFF590LFF.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF446XRT bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF813HVG 11582910 ENCODE Processing Pipeline ecc8d08b7fc04d22edcdf5a532696396 https://www.encodeproject.org/files/ENCFF446XRT/@@download/ENCFF446XRT.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF600LLW bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF496KKT 845515 ENCODE Processing Pipeline c94bc4133f883886eaf3c3a120aebcf7 https://www.encodeproject.org/files/ENCFF600LLW/@@download/ENCFF600LLW.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF772OYF bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF552ZAY 11205338 ENCODE Processing Pipeline 9a0033761843cbdc1e8f6fe34115f2c6 https://www.encodeproject.org/files/ENCFF772OYF/@@download/ENCFF772OYF.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF496KKT bed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF552ZAY, ENCFF803FZY, ENCFF813HVG 442923 ENCODE Processing Pipeline 0dec633c4a828f77ca7f75e4fbef4747 https://www.encodeproject.org/files/ENCFF496KKT/@@download/ENCFF496KKT.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF803FZY bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF103CZU, ENCFF578ISP 5583357 ENCODE Processing Pipeline b465b7c2b84f5f8fb8b676d502b35b66 https://www.encodeproject.org/files/ENCFF803FZY/@@download/ENCFF803FZY.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF552ZAY bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF727QOD 5439753 ENCODE Processing Pipeline cd17067a85d52f2050be5d06ce0f6a33 https://www.encodeproject.org/files/ENCFF552ZAY/@@download/ENCFF552ZAY.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF495MHZ bed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF552ZAY, ENCFF803FZY, ENCFF813HVG 486318 ENCODE Processing Pipeline 7a79922b588af54d6245ba1711aac16f https://www.encodeproject.org/files/ENCFF495MHZ/@@download/ENCFF495MHZ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF013MKU bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF495MHZ 903726 ENCODE Processing Pipeline 6a224d4da4b9339ae202c0da4da7d9c0 https://www.encodeproject.org/files/ENCFF013MKU/@@download/ENCFF013MKU.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF000QBM bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QBZ 818726880 Richard Myers, HAIB 157723e8ab7cbfc06fb94d061c7569e6 https://www.encodeproject.org/files/ENCFF000QBM/@@download/ENCFF000QBM.bam hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QBO bigBed broadPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKH 1305679 Richard Myers, HAIB 8683ee678f122d328b96f55efe2aa545 https://www.encodeproject.org/files/ENCFF000QBO/@@download/ENCFF000QBO.bigBed hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QBP bigBed broadPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKI 1629054 Richard Myers, HAIB 76a4206d9f4bcff0917cb1206c7d79cd https://www.encodeproject.org/files/ENCFF000QBP/@@download/ENCFF000QBP.bigBed hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QBR bigWig raw signal ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 1 33848515 Richard Myers, HAIB f023d3a5cb5f65f493e0a39d43ecccf8 https://www.encodeproject.org/files/ENCFF000QBR/@@download/ENCFF000QBR.bigWig hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000QBS bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QCC 1275122295 Richard Myers, HAIB f60da14de4ad32835f45cc232ae01c43 https://www.encodeproject.org/files/ENCFF000QBS/@@download/ENCFF000QBS.bam hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QBU bigWig raw signal ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 1 77217410 Richard Myers, HAIB a386dacad8fd01a7a71a8c47a6c523bf https://www.encodeproject.org/files/ENCFF000QBU/@@download/ENCFF000QBU.bigWig hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000QBZ fastq reads ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 808289836 Richard Myers, HAIB e3e67d3e094d5c916ccf3cbeabff4657 https://www.encodeproject.org/files/ENCFF000QBZ/@@download/ENCFF000QBZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QCC fastq reads ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1271882689 Richard Myers, HAIB 85666be4ae98fb197384f891f6b4cfe5 https://www.encodeproject.org/files/ENCFF000QCC/@@download/ENCFF000QCC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UKH bed broadPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 1 717099 Richard Myers, HAIB da0ebd35f57b33b05d05393da1f33a60 https://www.encodeproject.org/files/ENCFF001UKH/@@download/ENCFF001UKH.bed.gz hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UKI bed broadPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 1 1043464 Richard Myers, HAIB d6fab7be071c8d4b24ff4f389efd1250 https://www.encodeproject.org/files/ENCFF001UKI/@@download/ENCFF001UKI.bed.gz hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CMC bed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1187908 ENCODE Consortium Analysis Working Group ad3cebc9cc63d00128334a3f1539e7af https://www.encodeproject.org/files/ENCFF002CMC/@@download/ENCFF002CMC.bed.gz hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF335HMQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE ENCFF002CMC 2937336 ENCODE Consortium 8fbce0bf5524ec88c04436e0c8e32a09 https://www.encodeproject.org/files/ENCFF335HMQ/@@download/ENCFF335HMQ.bigBed hg19 archived borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF393FKW bam unfiltered alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBZ, ENCFF643CGH 1029801434 ENCODE Processing Pipeline b6872ae7dd9d23730bace1de4b8119ee https://www.encodeproject.org/files/ENCFF393FKW/@@download/ENCFF393FKW.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF178VEA bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBZ, ENCFF643CGH 481515882 ENCODE Processing Pipeline 8c11b01b11fba5b2e00ad9553b0d30ad https://www.encodeproject.org/files/ENCFF178VEA/@@download/ENCFF178VEA.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF535RJW bam unfiltered alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCC, ENCFF643CGH 1598125550 ENCODE Processing Pipeline e2e3c88bce29aca08752b1e725389ffe https://www.encodeproject.org/files/ENCFF535RJW/@@download/ENCFF535RJW.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF797FEY bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCC, ENCFF643CGH 971792096 ENCODE Processing Pipeline 8a018a2c20ebe932ee90cc5faae07ed3 https://www.encodeproject.org/files/ENCFF797FEY/@@download/ENCFF797FEY.bam GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF825FLR bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBZ, ENCFF807MUK 481989402 ENCODE Processing Pipeline 7fc703b190f76e02ff8ec58489d4b082 https://www.encodeproject.org/files/ENCFF825FLR/@@download/ENCFF825FLR.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF106ZVG bam unfiltered alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBZ, ENCFF807MUK 1027257145 ENCODE Processing Pipeline b7c4148db749b0d662d6bd948968f468 https://www.encodeproject.org/files/ENCFF106ZVG/@@download/ENCFF106ZVG.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF715OQW bam unfiltered alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCC, ENCFF807MUK 1595301012 ENCODE Processing Pipeline 5b0bb7cd806d3bc7cb2b863bfffadf1a https://www.encodeproject.org/files/ENCFF715OQW/@@download/ENCFF715OQW.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF112YUX bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCC, ENCFF807MUK 972562441 ENCODE Processing Pipeline a61a001d48f6961b8e41a159a2bac1a3 https://www.encodeproject.org/files/ENCFF112YUX/@@download/ENCFF112YUX.bam hg19 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF656MEH bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178VEA, ENCFF913HVS 353932059 ENCODE Processing Pipeline fab6070fd5cfbfe8846c0760d4115034 https://www.encodeproject.org/files/ENCFF656MEH/@@download/ENCFF656MEH.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF489FFF bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 647192205 ENCODE Processing Pipeline 21f67eecae2c17c1eab3f89f7976b51c https://www.encodeproject.org/files/ENCFF489FFF/@@download/ENCFF489FFF.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF043FNE bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178VEA, ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 686224753 ENCODE Processing Pipeline a28aae1dc7372d288179b27c3492bf48 https://www.encodeproject.org/files/ENCFF043FNE/@@download/ENCFF043FNE.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF049FYV bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178VEA, ENCFF913HVS 195143996 ENCODE Processing Pipeline 2c49dcec0f44c36e57c0c9a60526284e https://www.encodeproject.org/files/ENCFF049FYV/@@download/ENCFF049FYV.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF539BFH bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 445640730 ENCODE Processing Pipeline 869d3e7c5d4bb133d421b739d14ab897 https://www.encodeproject.org/files/ENCFF539BFH/@@download/ENCFF539BFH.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF070ERF bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178VEA, ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 584396899 ENCODE Processing Pipeline ddd64a870c3094418fc8d313458e4075 https://www.encodeproject.org/files/ENCFF070ERF/@@download/ENCFF070ERF.bigWig GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF335ASE bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178VEA, ENCFF913HVS 5205652 ENCODE Processing Pipeline 99b677e39d8e1bb71cf78b6c60adf7f3 https://www.encodeproject.org/files/ENCFF335ASE/@@download/ENCFF335ASE.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF619NIZ bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 6453589 ENCODE Processing Pipeline 51e6a3dc883808afb2060f66baf0b69a https://www.encodeproject.org/files/ENCFF619NIZ/@@download/ENCFF619NIZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF933FSJ bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178VEA, ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 6711034 ENCODE Processing Pipeline 4b9450419227b060b82892d3876f7cef https://www.encodeproject.org/files/ENCFF933FSJ/@@download/ENCFF933FSJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF770HSR bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF335ASE 12769179 ENCODE Processing Pipeline a8271e139842ce8b43705f0a627f6e80 https://www.encodeproject.org/files/ENCFF770HSR/@@download/ENCFF770HSR.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF706JQB bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF619NIZ 12824313 ENCODE Processing Pipeline a4f40b114e767cc6dc5ed4d9c2f04621 https://www.encodeproject.org/files/ENCFF706JQB/@@download/ENCFF706JQB.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF987SRA bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF933FSJ 12940768 ENCODE Processing Pipeline 61bd3af1d05258026dec551b51958508 https://www.encodeproject.org/files/ENCFF987SRA/@@download/ENCFF987SRA.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF448ZSO bed narrowPeak conservative idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF335ASE, ENCFF419RSJ, ENCFF619NIZ, ENCFF933FSJ 909409 ENCODE Processing Pipeline 33fcc6e809237c1fb1bc3f66d008880e https://www.encodeproject.org/files/ENCFF448ZSO/@@download/ENCFF448ZSO.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF160BBX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF448ZSO 1639098 ENCODE Processing Pipeline e0e3a96e929082a930767ca68a6b1411 https://www.encodeproject.org/files/ENCFF160BBX/@@download/ENCFF160BBX.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF900NVQ bed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF335ASE, ENCFF419RSJ, ENCFF619NIZ, ENCFF933FSJ 999894 ENCODE Processing Pipeline 601ed3798660585b840d49abb2d4cb1c https://www.encodeproject.org/files/ENCFF900NVQ/@@download/ENCFF900NVQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF717PDB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF900NVQ 1772636 ENCODE Processing Pipeline c1bdc59ce9684cede555512c0952f960 https://www.encodeproject.org/files/ENCFF717PDB/@@download/ENCFF717PDB.bigBed GRCh38 released borderline replicate concordance, low read depth, moderate library complexity, control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NVG bam alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NVQ 693766087 Richard Myers, HAIB 42aa302e95ac2b21de910709447c584a https://www.encodeproject.org/files/ENCFF000NVG/@@download/ENCFF000NVG.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NVL bam alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NVV 701022640 Richard Myers, HAIB 515504ae91539f0f653c44a08f0578ee https://www.encodeproject.org/files/ENCFF000NVL/@@download/ENCFF000NVL.bam hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NVN bigWig raw signal ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 10384665 Richard Myers, HAIB 48401e339b59d86b5b598caa3409e0ce https://www.encodeproject.org/files/ENCFF000NVN/@@download/ENCFF000NVN.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000NVO bigWig raw signal ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 6105224 Richard Myers, HAIB f093d89a74862c938802730867234437 https://www.encodeproject.org/files/ENCFF000NVO/@@download/ENCFF000NVO.bigWig hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000NVQ fastq reads ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 615753404 Richard Myers, HAIB 2d5ca71a2ea105a422f38e65780fc4a6 https://www.encodeproject.org/files/ENCFF000NVQ/@@download/ENCFF000NVQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NVV fastq reads ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 665129448 Richard Myers, HAIB fada711c920c8a8b43c5379ac8928d16 https://www.encodeproject.org/files/ENCFF000NVV/@@download/ENCFF000NVV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001TWZ bed broadPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 20025 Richard Myers, HAIB 2fb3ce61ce132662e53108db0e56d3e0 https://www.encodeproject.org/files/ENCFF001TWZ/@@download/ENCFF001TWZ.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001TXB bed broadPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 55523 Richard Myers, HAIB 1aa9b3494015216bb74bcbbcd65e239b https://www.encodeproject.org/files/ENCFF001TXB/@@download/ENCFF001TXB.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CGY bed narrowPeak optimal idr thresholded peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 82458 ENCODE Consortium Analysis Working Group 4d8a69baf039742337c0db70c72aad8a https://www.encodeproject.org/files/ENCFF002CGY/@@download/ENCFF002CGY.bed.gz hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF799MEK bigBed broadPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TWZ 75656 ENCODE Consortium 8609b67105c6d9cf8ef1a5865c2cb90c https://www.encodeproject.org/files/ENCFF799MEK/@@download/ENCFF799MEK.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF675NIE bigBed broadPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TXB 142118 ENCODE Consortium 625c86af77e7c7e124cac8f550e3a0b3 https://www.encodeproject.org/files/ENCFF675NIE/@@download/ENCFF675NIE.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF419POP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE ENCFF002CGY 194620 ENCODE Consortium e7aefd497650cc2617fdc7db7303bfb5 https://www.encodeproject.org/files/ENCFF419POP/@@download/ENCFF419POP.bigBed hg19 archived mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF230YPD bam unfiltered alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NVV, ENCFF643CGH 876149398 ENCODE Processing Pipeline 395fb17dc8bf455adb3f7feb422ceddb https://www.encodeproject.org/files/ENCFF230YPD/@@download/ENCFF230YPD.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF226OCU bam unfiltered alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NVQ, ENCFF643CGH 841190708 ENCODE Processing Pipeline 9b977b9f9d12d187e90d4b409d63afc9 https://www.encodeproject.org/files/ENCFF226OCU/@@download/ENCFF226OCU.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF606IKC bam alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NVQ, ENCFF643CGH 477560048 ENCODE Processing Pipeline 76ca7d31bf442632fba9a4800ca2d196 https://www.encodeproject.org/files/ENCFF606IKC/@@download/ENCFF606IKC.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF135UPU bam alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NVV, ENCFF643CGH 440830031 ENCODE Processing Pipeline 1d700cce82f88d32b7a60031b335f388 https://www.encodeproject.org/files/ENCFF135UPU/@@download/ENCFF135UPU.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF293YYY bam unfiltered alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NVV, ENCFF807MUK 874247375 ENCODE Processing Pipeline 8039afffb1372ce31c4c50a803c1634d https://www.encodeproject.org/files/ENCFF293YYY/@@download/ENCFF293YYY.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF952WXS bam unfiltered alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NVQ, ENCFF807MUK 839173578 ENCODE Processing Pipeline 567909af6d32e871c562928854c9f8c0 https://www.encodeproject.org/files/ENCFF952WXS/@@download/ENCFF952WXS.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF371ZBY bam alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NVV, ENCFF807MUK 438392999 ENCODE Processing Pipeline 286b0efc48b9f1f8e9ba3faa161e3e9d https://www.encodeproject.org/files/ENCFF371ZBY/@@download/ENCFF371ZBY.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF477EHC bam alignments ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NVQ, ENCFF807MUK 474541605 ENCODE Processing Pipeline 6260e93f25984f6d00b70e88fac094a4 https://www.encodeproject.org/files/ENCFF477EHC/@@download/ENCFF477EHC.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF401NGY bigWig signal p-value ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF606IKC 416871046 ENCODE Processing Pipeline f65d5fd214b31296e2407ca7a06b131d https://www.encodeproject.org/files/ENCFF401NGY/@@download/ENCFF401NGY.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF884UUR bigWig signal p-value ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF135UPU, ENCFF488YYE 351212679 ENCODE Processing Pipeline b430a30f81508a6cd6e1b303bffbec93 https://www.encodeproject.org/files/ENCFF884UUR/@@download/ENCFF884UUR.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF705GGU bigWig fold change over control ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF606IKC 296177227 ENCODE Processing Pipeline 4361967f3bae5d4d59ce364debe14791 https://www.encodeproject.org/files/ENCFF705GGU/@@download/ENCFF705GGU.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF466MBM bigWig signal p-value ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF135UPU, ENCFF488YYE, ENCFF606IKC 510269668 ENCODE Processing Pipeline ddcad0c19108b7324f96072907c956dc https://www.encodeproject.org/files/ENCFF466MBM/@@download/ENCFF466MBM.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF988QZX bigWig fold change over control ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF135UPU, ENCFF488YYE 262061172 ENCODE Processing Pipeline 78834e4f2b535217d662f8547624c9b8 https://www.encodeproject.org/files/ENCFF988QZX/@@download/ENCFF988QZX.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF103EJS bigWig fold change over control ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF135UPU, ENCFF488YYE, ENCFF606IKC 487982582 ENCODE Processing Pipeline aed1ac8bf75d2d61070b5bd69de1536a https://www.encodeproject.org/files/ENCFF103EJS/@@download/ENCFF103EJS.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF765BOE bed narrowPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF135UPU, ENCFF488YYE, ENCFF606IKC 4759637 ENCODE Processing Pipeline 45b156dea8f15ac1d9ec4988a60cdcb1 https://www.encodeproject.org/files/ENCFF765BOE/@@download/ENCFF765BOE.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF668BWD bed narrowPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF488YYE, ENCFF606IKC 4327453 ENCODE Processing Pipeline 0d9a6ac6aaf09b34b1e31d2fbffc7242 https://www.encodeproject.org/files/ENCFF668BWD/@@download/ENCFF668BWD.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF816QSU bed narrowPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF135UPU, ENCFF488YYE 3918961 ENCODE Processing Pipeline d893130237d5b63cc1eec40c6ab037f7 https://www.encodeproject.org/files/ENCFF816QSU/@@download/ENCFF816QSU.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF954RBG bigBed narrowPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF668BWD 10230974 ENCODE Processing Pipeline 9e92b20421922eb3b2d166e67b360963 https://www.encodeproject.org/files/ENCFF954RBG/@@download/ENCFF954RBG.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF712LEE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF363SYB 393528 ENCODE Processing Pipeline 504864eff7cb035d326781eccc17b493 https://www.encodeproject.org/files/ENCFF712LEE/@@download/ENCFF712LEE.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF024WRJ bigBed narrowPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF816QSU 8123889 ENCODE Processing Pipeline 31a57d578047fb999b3805d8b4105643 https://www.encodeproject.org/files/ENCFF024WRJ/@@download/ENCFF024WRJ.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF365JTV bigBed narrowPeak peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF765BOE 10942901 ENCODE Processing Pipeline d1a9bc7dbf868ac74c28ac6ec2b7d130 https://www.encodeproject.org/files/ENCFF365JTV/@@download/ENCFF365JTV.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF980VOD bed narrowPeak optimal idr thresholded peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF668BWD, ENCFF765BOE, ENCFF816QSU 225543 ENCODE Processing Pipeline 45dda8fed51a820cd2132d244827ce50 https://www.encodeproject.org/files/ENCFF980VOD/@@download/ENCFF980VOD.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF363SYB bed narrowPeak conservative idr thresholded peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF668BWD, ENCFF765BOE, ENCFF816QSU 190019 ENCODE Processing Pipeline 815cd829e21e45c95935ed2673d016c3 https://www.encodeproject.org/files/ENCFF363SYB/@@download/ENCFF363SYB.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF501GFQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF980VOD 445937 ENCODE Processing Pipeline ecd50c625f16a7115f0c261a07d1e3fb https://www.encodeproject.org/files/ENCFF501GFQ/@@download/ENCFF501GFQ.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OUQ bam alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OVB 700987148 Richard Myers, HAIB 5ef728eab84d52432511342cdff63ebd https://www.encodeproject.org/files/ENCFF000OUQ/@@download/ENCFF000OUQ.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OUR bigBed broadPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCS 586005 Richard Myers, HAIB 985213a54b97dc4e8f8c9c9b4c482645 https://www.encodeproject.org/files/ENCFF000OUR/@@download/ENCFF000OUR.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OUS bigBed broadPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCT 555827 Richard Myers, HAIB bde3c51f603a860db6440f0c01db26be https://www.encodeproject.org/files/ENCFF000OUS/@@download/ENCFF000OUS.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OUT bam alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OVC 653168723 Richard Myers, HAIB 635feca05528715587798e647ba03114 https://www.encodeproject.org/files/ENCFF000OUT/@@download/ENCFF000OUT.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OUV bigWig raw signal ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 33285760 Richard Myers, HAIB 0ae3dcd0495da2784491fa78ca0fdec9 https://www.encodeproject.org/files/ENCFF000OUV/@@download/ENCFF000OUV.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OUW bigWig raw signal ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 22411548 Richard Myers, HAIB 19e8e55ad3d0e72b7d54fc5055bd9b99 https://www.encodeproject.org/files/ENCFF000OUW/@@download/ENCFF000OUW.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OVB fastq reads ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 737678431 Richard Myers, HAIB 247297ed50575b0f91b8b7c31ed4b185 https://www.encodeproject.org/files/ENCFF000OVB/@@download/ENCFF000OVB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OVC fastq reads ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 732345719 Richard Myers, HAIB b724177c35de81acf4a7315b86f64b0e https://www.encodeproject.org/files/ENCFF000OVC/@@download/ENCFF000OVC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UCS bed broadPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 371588 Richard Myers, HAIB 8ae0b4964ac4615972772d49ad6054bb https://www.encodeproject.org/files/ENCFF001UCS/@@download/ENCFF001UCS.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UCT bed broadPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 322739 Richard Myers, HAIB 9de6724719e0db507c7985b222e28016 https://www.encodeproject.org/files/ENCFF001UCT/@@download/ENCFF001UCT.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CJO bed narrowPeak optimal idr thresholded peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 424230 ENCODE Consortium Analysis Working Group 8c2f6676e4f0bfee35ce23fb53b922e8 https://www.encodeproject.org/files/ENCFF002CJO/@@download/ENCFF002CJO.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF025ORE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE ENCFF002CJO 1116181 ENCODE Consortium 2579302bac4324846abb435149993a01 https://www.encodeproject.org/files/ENCFF025ORE/@@download/ENCFF025ORE.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF196FHM bam unfiltered alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVC, ENCFF643CGH 917361785 ENCODE Processing Pipeline 5b321df49f337129f0548343cf2156a1 https://www.encodeproject.org/files/ENCFF196FHM/@@download/ENCFF196FHM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF315QGI bam alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVC, ENCFF643CGH 490066223 ENCODE Processing Pipeline 977c22830c84763c7bc13fe05599664f https://www.encodeproject.org/files/ENCFF315QGI/@@download/ENCFF315QGI.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF961JDA bam unfiltered alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVB, ENCFF643CGH 926993205 ENCODE Processing Pipeline 144d980a5508afa4a30213140632e865 https://www.encodeproject.org/files/ENCFF961JDA/@@download/ENCFF961JDA.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF184PWQ bam alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVB, ENCFF643CGH 534405570 ENCODE Processing Pipeline 7d2a601a175cd7f2b086a962d7a205d8 https://www.encodeproject.org/files/ENCFF184PWQ/@@download/ENCFF184PWQ.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF552CKC bam unfiltered alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVB, ENCFF807MUK 924601169 ENCODE Processing Pipeline 7dfe81bb26dea5b6f40a3e1f13069f14 https://www.encodeproject.org/files/ENCFF552CKC/@@download/ENCFF552CKC.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF456OEK bam alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OVB, ENCFF807MUK 534719094 ENCODE Processing Pipeline b5f6d59f4ca74f403be67cea9c832c4c https://www.encodeproject.org/files/ENCFF456OEK/@@download/ENCFF456OEK.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF089LSW bam alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVC, ENCFF807MUK 490443429 ENCODE Processing Pipeline 19fcd8f17e7404d4a2ee0d72a3058aab https://www.encodeproject.org/files/ENCFF089LSW/@@download/ENCFF089LSW.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF209XKV bam unfiltered alignments ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OVC, ENCFF807MUK 914691457 ENCODE Processing Pipeline b9071f288e832f5d62a2de2a83fc4a2d https://www.encodeproject.org/files/ENCFF209XKV/@@download/ENCFF209XKV.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF635LLL bigWig signal p-value ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF184PWQ, ENCFF948LKH 341305329 ENCODE Processing Pipeline 7a0db8937966ccb19d158e98f2325c6c https://www.encodeproject.org/files/ENCFF635LLL/@@download/ENCFF635LLL.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF794QHD bigWig signal p-value ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF315QGI, ENCFF948LKH 416957781 ENCODE Processing Pipeline cc60f83cc14785ea5c244ffef1ba9ceb https://www.encodeproject.org/files/ENCFF794QHD/@@download/ENCFF794QHD.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF569TPM bigWig signal p-value ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184PWQ, ENCFF315QGI, ENCFF948LKH 491303596 ENCODE Processing Pipeline 40f9c0b2e5d6537c30f90f15ccfe4e98 https://www.encodeproject.org/files/ENCFF569TPM/@@download/ENCFF569TPM.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF894CVE bigWig fold change over control ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF315QGI, ENCFF948LKH 228916877 ENCODE Processing Pipeline f9bad1eeb349fc072a24dce12a7ba44d https://www.encodeproject.org/files/ENCFF894CVE/@@download/ENCFF894CVE.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF689QWC bigWig fold change over control ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184PWQ, ENCFF315QGI, ENCFF948LKH 405658769 ENCODE Processing Pipeline 7c21cbea9ab86b3d590885b22447c2cb https://www.encodeproject.org/files/ENCFF689QWC/@@download/ENCFF689QWC.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF360PPQ bigWig fold change over control ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF184PWQ, ENCFF948LKH 235229342 ENCODE Processing Pipeline 6fa4bd1650e275079cf230665a1b41ab https://www.encodeproject.org/files/ENCFF360PPQ/@@download/ENCFF360PPQ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF957ADP bed narrowPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF184PWQ, ENCFF948LKH 5142962 ENCODE Processing Pipeline c14c27ca56233069a3e3ecbb183b2a02 https://www.encodeproject.org/files/ENCFF957ADP/@@download/ENCFF957ADP.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF800CHA bigBed narrowPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF966SAM 10692740 ENCODE Processing Pipeline 69deb0e6fa2226271cd406529ed194cb https://www.encodeproject.org/files/ENCFF800CHA/@@download/ENCFF800CHA.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF966SAM bed narrowPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF315QGI, ENCFF948LKH 4792578 ENCODE Processing Pipeline 49aa646a519c8409c5dae7f24f4fbaa7 https://www.encodeproject.org/files/ENCFF966SAM/@@download/ENCFF966SAM.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF390BRP bigBed narrowPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF957ADP 12944194 ENCODE Processing Pipeline 74fd341919e3d980134476dba7df9f1e https://www.encodeproject.org/files/ENCFF390BRP/@@download/ENCFF390BRP.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF893YFW bed narrowPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184PWQ, ENCFF315QGI, ENCFF948LKH 5649525 ENCODE Processing Pipeline c66da9dc07e99fbf9edcc14de59ff477 https://www.encodeproject.org/files/ENCFF893YFW/@@download/ENCFF893YFW.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF741GDG bigBed narrowPeak peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF893YFW 13285198 ENCODE Processing Pipeline c39216002a390c63215311cb8091c116 https://www.encodeproject.org/files/ENCFF741GDG/@@download/ENCFF741GDG.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF026ZRB bed narrowPeak conservative idr thresholded peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF893YFW, ENCFF957ADP, ENCFF966SAM 476790 ENCODE Processing Pipeline 1d4b173e5856c2bf1c206f9fc6a3af00 https://www.encodeproject.org/files/ENCFF026ZRB/@@download/ENCFF026ZRB.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF392WJE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF026ZRB 985131 ENCODE Processing Pipeline 3df856cf494eaa965584a4425f26f1cc https://www.encodeproject.org/files/ENCFF392WJE/@@download/ENCFF392WJE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF870SFJ bed narrowPeak optimal idr thresholded peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF893YFW, ENCFF957ADP, ENCFF966SAM 491657 ENCODE Processing Pipeline 37a1e34d55ce2dbc5e698b270c80ac13 https://www.encodeproject.org/files/ENCFF870SFJ/@@download/ENCFF870SFJ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF824BVI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHO ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF870SFJ 1006428 ENCODE Processing Pipeline 148e49ebaeebede4eac8d1b788980111 https://www.encodeproject.org/files/ENCFF824BVI/@@download/ENCFF824BVI.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF632EVH fastq reads ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 1 50 single-ended 1144149823 Richard Myers, HAIB 2fca44161d69ae1e9275d774444f4708 SRA:SRR5339044 https://www.encodeproject.org/files/ENCFF632EVH/@@download/ENCFF632EVH.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF778YOV fastq reads ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 1 50 single-ended 1227270161 Richard Myers, HAIB 7f573dad0ad72708d604001e5ceb271b SRA:SRR5339043 https://www.encodeproject.org/files/ENCFF778YOV/@@download/ENCFF778YOV.fastq.gz HiSeq 2000 /files/ENCFF913JVQ/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF697MUV bam alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 50 ENCFF632EVH, ENCFF807MUK 944710007 ENCODE Processing Pipeline 5c982e98a27b3ad0d4780086a8bca65b https://www.encodeproject.org/files/ENCFF697MUV/@@download/ENCFF697MUV.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF687NJZ bam alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 50 ENCFF778YOV, ENCFF807MUK 891430692 ENCODE Processing Pipeline 53b1ad257fe94fd185e7dc8f883ca17f https://www.encodeproject.org/files/ENCFF687NJZ/@@download/ENCFF687NJZ.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF310GOY bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF444TNY, ENCFF687NJZ 648378808 ENCODE Processing Pipeline f81ae139cfbcf2ae5197de8b68de73e1 https://www.encodeproject.org/files/ENCFF310GOY/@@download/ENCFF310GOY.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF970CAM bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF061QOJ, ENCFF697MUV 657631386 ENCODE Processing Pipeline 0bfe923a662a23fc608cf75b8a07ff50 https://www.encodeproject.org/files/ENCFF970CAM/@@download/ENCFF970CAM.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF313MJY bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF444TNY, ENCFF687NJZ 436972936 ENCODE Processing Pipeline 9d8f11ea62616717d5ceb7cf25da6eda https://www.encodeproject.org/files/ENCFF313MJY/@@download/ENCFF313MJY.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF741SCF bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF061QOJ, ENCFF697MUV 426336250 ENCODE Processing Pipeline e99bc7eb65779c7a46b1e405a4f53162 https://www.encodeproject.org/files/ENCFF741SCF/@@download/ENCFF741SCF.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF003TEQ bam unfiltered alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 50 ENCFF632EVH, ENCFF643CGH 1249239208 ENCODE Processing Pipeline d4fd6e5ed0da170ed9f2b7c53fdb7339 https://www.encodeproject.org/files/ENCFF003TEQ/@@download/ENCFF003TEQ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF620QZO bam unfiltered alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 50 ENCFF643CGH, ENCFF778YOV 1304997768 ENCODE Processing Pipeline 7ce495bc91c244c8b1fa449a12d9dd8f https://www.encodeproject.org/files/ENCFF620QZO/@@download/ENCFF620QZO.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF330ZVF bam alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 50 ENCFF632EVH, ENCFF643CGH 944311289 ENCODE Processing Pipeline 82298dd43c4061f39801ced2c5b15aa6 https://www.encodeproject.org/files/ENCFF330ZVF/@@download/ENCFF330ZVF.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF066TDG bam alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 50 ENCFF643CGH, ENCFF778YOV 890708156 ENCODE Processing Pipeline ad986b20689248196fd426f0c9912b97 https://www.encodeproject.org/files/ENCFF066TDG/@@download/ENCFF066TDG.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF166TDZ bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF066TDG, ENCFF162ZOO 611713934 ENCODE Processing Pipeline 9b9600155f139c72d626fad85d1de1cb https://www.encodeproject.org/files/ENCFF166TDZ/@@download/ENCFF166TDZ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF118JMD bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF330ZVF, ENCFF332SVJ 726040323 ENCODE Processing Pipeline 9365018c19107472539ce7205cf941e0 https://www.encodeproject.org/files/ENCFF118JMD/@@download/ENCFF118JMD.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF675ZYU bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF066TDG, ENCFF162ZOO, ENCFF330ZVF, ENCFF332SVJ 1239012654 ENCODE Processing Pipeline ce5193edebf5d324279b5264285019fe https://www.encodeproject.org/files/ENCFF675ZYU/@@download/ENCFF675ZYU.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF583AKO bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF330ZVF, ENCFF332SVJ 455730252 ENCODE Processing Pipeline a54f3449e959612b84f8b45abe0c89ab https://www.encodeproject.org/files/ENCFF583AKO/@@download/ENCFF583AKO.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF677CNQ bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF066TDG, ENCFF162ZOO 431245804 ENCODE Processing Pipeline 72af46ae5790ba55e8640907b1d20b80 https://www.encodeproject.org/files/ENCFF677CNQ/@@download/ENCFF677CNQ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF112GHP bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF066TDG, ENCFF162ZOO, ENCFF330ZVF, ENCFF332SVJ 1075611514 ENCODE Processing Pipeline 2422ec5da6b74c46c6125a10b9d77ea5 https://www.encodeproject.org/files/ENCFF112GHP/@@download/ENCFF112GHP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF318ICI bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF066TDG, ENCFF162ZOO 6594649 ENCODE Processing Pipeline c31f11d8abe3e70259e45c68f8f21361 https://www.encodeproject.org/files/ENCFF318ICI/@@download/ENCFF318ICI.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF665RFE bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF066TDG, ENCFF162ZOO, ENCFF330ZVF, ENCFF332SVJ 7084471 ENCODE Processing Pipeline a3878e2c9d342dd3cc2f8a67d233cf93 https://www.encodeproject.org/files/ENCFF665RFE/@@download/ENCFF665RFE.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF354MAW bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF179HIK 10962525 ENCODE Processing Pipeline 8ca18e49a4d7da8036bb4bbe565be454 https://www.encodeproject.org/files/ENCFF354MAW/@@download/ENCFF354MAW.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF179HIK bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF330ZVF, ENCFF332SVJ 5008917 ENCODE Processing Pipeline cf4d1f9904f6c62a0df213b1061f951b https://www.encodeproject.org/files/ENCFF179HIK/@@download/ENCFF179HIK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF570AOS bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF318ICI 12752068 ENCODE Processing Pipeline e36f3e58c3ae6787bf4db2fb74e98c56 https://www.encodeproject.org/files/ENCFF570AOS/@@download/ENCFF570AOS.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF561ZCZ bed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF179HIK, ENCFF318ICI, ENCFF419RSJ, ENCFF665RFE 103633 ENCODE Processing Pipeline 132d8cec16663937ab3d080451cd2263 https://www.encodeproject.org/files/ENCFF561ZCZ/@@download/ENCFF561ZCZ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF777YNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF955AOD 376735 ENCODE Processing Pipeline 1b96603803367a75f2d032c7a4e63602 https://www.encodeproject.org/files/ENCFF777YNZ/@@download/ENCFF777YNZ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF147TRJ bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF665RFE 12998625 ENCODE Processing Pipeline 7cd0d3a8183c62d44b2509670b5a254c https://www.encodeproject.org/files/ENCFF147TRJ/@@download/ENCFF147TRJ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF738ZFZ bigBed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF561ZCZ 247269 ENCODE Processing Pipeline f4711b6b166ae2952021125cb64edd48 https://www.encodeproject.org/files/ENCFF738ZFZ/@@download/ENCFF738ZFZ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF955AOD bed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF179HIK, ENCFF318ICI, ENCFF419RSJ, ENCFF665RFE 149529 ENCODE Processing Pipeline bc4c11d9d78b94563fe383ad4e73cabf https://www.encodeproject.org/files/ENCFF955AOD/@@download/ENCFF955AOD.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF238MPM bam unfiltered alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 50 ENCFF632EVH, ENCFF807MUK 1246686704 ENCODE Processing Pipeline 526ba1e6ff7f204a5c61341d2319d46a https://www.encodeproject.org/files/ENCFF238MPM/@@download/ENCFF238MPM.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF215WEE bam unfiltered alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 50 ENCFF778YOV, ENCFF807MUK 1303179867 ENCODE Processing Pipeline 5cb8e72fd969441f4d7d23a52aba7ae1 https://www.encodeproject.org/files/ENCFF215WEE/@@download/ENCFF215WEE.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF653KSG bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF061QOJ, ENCFF697MUV 5013280 ENCODE Processing Pipeline 3b05dbf77ef7c94afb2756e092c442af https://www.encodeproject.org/files/ENCFF653KSG/@@download/ENCFF653KSG.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF775QZE bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF061QOJ, ENCFF444TNY, ENCFF687NJZ, ENCFF697MUV 1224118762 ENCODE Processing Pipeline e5dcac166c67e602b664e45261925353 https://www.encodeproject.org/files/ENCFF775QZE/@@download/ENCFF775QZE.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF609EAA bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF061QOJ, ENCFF444TNY, ENCFF687NJZ, ENCFF697MUV 1076212579 ENCODE Processing Pipeline f18c53708b5125935ccedc3afc43ac07 https://www.encodeproject.org/files/ENCFF609EAA/@@download/ENCFF609EAA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF274QRN bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF444TNY, ENCFF687NJZ 6619368 ENCODE Processing Pipeline 9623122622e543751f25f98e9569871c https://www.encodeproject.org/files/ENCFF274QRN/@@download/ENCFF274QRN.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF321EBZ bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF061QOJ, ENCFF444TNY, ENCFF687NJZ, ENCFF697MUV 7082793 ENCODE Processing Pipeline 38d601c00b062ea1c82507bfe9a3f98c https://www.encodeproject.org/files/ENCFF321EBZ/@@download/ENCFF321EBZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF032IBR bigBed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF042RAK 303062 ENCODE Processing Pipeline e3214511453d23770fef16740f036035 https://www.encodeproject.org/files/ENCFF032IBR/@@download/ENCFF032IBR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF490JLD bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF274QRN 12737023 ENCODE Processing Pipeline 1243fa2a79f8b3739d1eeea91c53a65d https://www.encodeproject.org/files/ENCFF490JLD/@@download/ENCFF490JLD.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF261OKK bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF653KSG 10958812 ENCODE Processing Pipeline 988f88a5427ba8c782a715c90950e1e3 https://www.encodeproject.org/files/ENCFF261OKK/@@download/ENCFF261OKK.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF057VLW bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF321EBZ 12957225 ENCODE Processing Pipeline 9c8b03341dad62af3c3e0678e59fc5df https://www.encodeproject.org/files/ENCFF057VLW/@@download/ENCFF057VLW.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF402WGE bigBed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF053ADC 239826 ENCODE Processing Pipeline 640b3b3284681584dfac0556c2cbca37 https://www.encodeproject.org/files/ENCFF402WGE/@@download/ENCFF402WGE.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF042RAK bed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF274QRN, ENCFF321EBZ, ENCFF653KSG 143406 ENCODE Processing Pipeline 5999caca5c955d8fcf5642d2be510f69 https://www.encodeproject.org/files/ENCFF042RAK/@@download/ENCFF042RAK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF053ADC bed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF274QRN, ENCFF321EBZ, ENCFF653KSG 99607 ENCODE Processing Pipeline 9679702e2cbe451a0251b3e344a98c49 https://www.encodeproject.org/files/ENCFF053ADC/@@download/ENCFF053ADC.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth mismatched status ENCFF000NJF bam alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NJU 129490991 Richard Myers, HAIB 803067dfa24dc11ec3fba49dea814efe https://www.encodeproject.org/files/ENCFF000NJF/@@download/ENCFF000NJF.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NJG bigBed broadPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TUD 548744 Richard Myers, HAIB 4a9b7c0df9f20e925b0afe113381e4bf https://www.encodeproject.org/files/ENCFF000NJG/@@download/ENCFF000NJG.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NJH bigBed broadPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TUE 186169 Richard Myers, HAIB 8937fb39a9cbdbe35d0b513766368d0d https://www.encodeproject.org/files/ENCFF000NJH/@@download/ENCFF000NJH.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NJI bam alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NJS 2084764597 Richard Myers, HAIB 6b81bc9541ce061b4f2bcddb1839cc78 https://www.encodeproject.org/files/ENCFF000NJI/@@download/ENCFF000NJI.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NJJ bigWig raw signal ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 1 43527645 Richard Myers, HAIB e5b2a89fee4ec8771e3cdacedf7d33ba https://www.encodeproject.org/files/ENCFF000NJJ/@@download/ENCFF000NJJ.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NJK bigWig raw signal ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 1 14630718 Richard Myers, HAIB 5b2b0a3264d9cb24f9c51c862b5988b4 https://www.encodeproject.org/files/ENCFF000NJK/@@download/ENCFF000NJK.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NJS fastq reads ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1804476022 Richard Myers, HAIB 480fb988341ea280eb4d92489d1b67f1 https://www.encodeproject.org/files/ENCFF000NJS/@@download/ENCFF000NJS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NJU fastq reads ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1622656096 Richard Myers, HAIB 404485b39ed58af5dc64ece9d250416c https://www.encodeproject.org/files/ENCFF000NJU/@@download/ENCFF000NJU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TUD bed broadPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 1 321489 Richard Myers, HAIB 59647b9253b5d8539aca73d30dfa9555 https://www.encodeproject.org/files/ENCFF001TUD/@@download/ENCFF001TUD.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TUE bed broadPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 1 85051 Richard Myers, HAIB c3893245c7e5651c2b8259ec4f0da46e https://www.encodeproject.org/files/ENCFF001TUE/@@download/ENCFF001TUE.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CGF bed narrowPeak optimal idr thresholded peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 225823 ENCODE Consortium Analysis Working Group 08d661b252ca4942d8a9c8bdb11857de https://www.encodeproject.org/files/ENCFF002CGF/@@download/ENCFF002CGF.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF067HJE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE ENCFF002CGF 541022 ENCODE Consortium ce026bbd48b0f50c33647338b0f68d3a https://www.encodeproject.org/files/ENCFF067HJE/@@download/ENCFF067HJE.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF520AQZ bam unfiltered alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NJU, ENCFF643CGH 1753030638 ENCODE Processing Pipeline 7e9f102df4fd5d445e601c5ff730fdf5 https://www.encodeproject.org/files/ENCFF520AQZ/@@download/ENCFF520AQZ.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF190FDQ bam alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NJU, ENCFF643CGH 824269561 ENCODE Processing Pipeline e8ef345b7109829d43c88b66a0a33c41 https://www.encodeproject.org/files/ENCFF190FDQ/@@download/ENCFF190FDQ.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF721NZQ bam unfiltered alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NJS, ENCFF643CGH 2146633373 ENCODE Processing Pipeline 8083924119001c652d95e122a9dca07b https://www.encodeproject.org/files/ENCFF721NZQ/@@download/ENCFF721NZQ.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF576DWG bam alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NJS, ENCFF643CGH 990733132 ENCODE Processing Pipeline 7ab5a58586b3e40368d1bd88de7b6f8d https://www.encodeproject.org/files/ENCFF576DWG/@@download/ENCFF576DWG.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF573CMH bam unfiltered alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NJU, ENCFF807MUK 1747303892 ENCODE Processing Pipeline 111918fddef949efe28edab083d0c4bb https://www.encodeproject.org/files/ENCFF573CMH/@@download/ENCFF573CMH.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF028JOY bam alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NJU, ENCFF807MUK 824227963 ENCODE Processing Pipeline 3e83bc855f64a17ff9c98d494cd318f9 https://www.encodeproject.org/files/ENCFF028JOY/@@download/ENCFF028JOY.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF285GPL bam unfiltered alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NJS, ENCFF807MUK 2139843836 ENCODE Processing Pipeline 5114840677008c065f3c7ef813d87fbf https://www.encodeproject.org/files/ENCFF285GPL/@@download/ENCFF285GPL.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF664NJN bam alignments ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NJS, ENCFF807MUK 990879313 ENCODE Processing Pipeline 6dd30c113e14d0c2bf795961e6408892 https://www.encodeproject.org/files/ENCFF664NJN/@@download/ENCFF664NJN.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF628USZ bigWig signal p-value ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF576DWG 696833626 ENCODE Processing Pipeline ecab347e94b175526c3046b3b52b77b7 https://www.encodeproject.org/files/ENCFF628USZ/@@download/ENCFF628USZ.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF054JBA bigWig signal p-value ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF190FDQ 554307517 ENCODE Processing Pipeline edecc299fc2f8be5bc04df9969937780 https://www.encodeproject.org/files/ENCFF054JBA/@@download/ENCFF054JBA.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF807JVF bigWig signal p-value ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF190FDQ, ENCFF576DWG 838001939 ENCODE Processing Pipeline fe1370947e5b72bddb71691c7fbb2bf0 https://www.encodeproject.org/files/ENCFF807JVF/@@download/ENCFF807JVF.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF679UAG bigWig fold change over control ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF576DWG 533575404 ENCODE Processing Pipeline f731014a07bcdbcbfbe5d661ad1104ea https://www.encodeproject.org/files/ENCFF679UAG/@@download/ENCFF679UAG.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF074YBF bigWig fold change over control ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF190FDQ 429292100 ENCODE Processing Pipeline 6523e7b09058282b8290258c9d4460cd https://www.encodeproject.org/files/ENCFF074YBF/@@download/ENCFF074YBF.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF882FLP bigWig fold change over control ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF190FDQ, ENCFF576DWG 815881280 ENCODE Processing Pipeline 59e97c718eebb26f97473401c4755999 https://www.encodeproject.org/files/ENCFF882FLP/@@download/ENCFF882FLP.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF277ALQ bed narrowPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF576DWG 6557580 ENCODE Processing Pipeline f5f517121defd173a9c536b0d7a2f453 https://www.encodeproject.org/files/ENCFF277ALQ/@@download/ENCFF277ALQ.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF541HVC bigBed narrowPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF243GJY 13326902 ENCODE Processing Pipeline 40fc26a8302b3186c6934a1bfb474875 https://www.encodeproject.org/files/ENCFF541HVC/@@download/ENCFF541HVC.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF243GJY bed narrowPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 2 ENCFF190FDQ 5782532 ENCODE Processing Pipeline 77b3e455e9a6bdcff34817a34e93e8bb https://www.encodeproject.org/files/ENCFF243GJY/@@download/ENCFF243GJY.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF809KZO bed narrowPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF190FDQ, ENCFF576DWG 6749496 ENCODE Processing Pipeline 8ba0df70e8c2b79a9667f0a97ae2e22d https://www.encodeproject.org/files/ENCFF809KZO/@@download/ENCFF809KZO.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF813RFS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF993AAD 521993 ENCODE Processing Pipeline 39a776f4dfa245e09ac19e074b8b096f https://www.encodeproject.org/files/ENCFF813RFS/@@download/ENCFF813RFS.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF645RJC bigBed narrowPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1 ENCFF277ALQ 12944197 ENCODE Processing Pipeline d765195e016e1c6c051c8c8076968d8c https://www.encodeproject.org/files/ENCFF645RJC/@@download/ENCFF645RJC.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF385AQS bigBed narrowPeak peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF809KZO 13094078 ENCODE Processing Pipeline a1817339cfacc67873a62d212b4af6c1 https://www.encodeproject.org/files/ENCFF385AQS/@@download/ENCFF385AQS.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF686JFS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF613DTQ 664186 ENCODE Processing Pipeline 0afa377947f1814c14302621c34165a6 https://www.encodeproject.org/files/ENCFF686JFS/@@download/ENCFF686JFS.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF993AAD bed narrowPeak conservative idr thresholded peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF243GJY, ENCFF277ALQ, ENCFF419RSJ, ENCFF809KZO 216095 ENCODE Processing Pipeline 636efedc5b8a05818544508279b04895 https://www.encodeproject.org/files/ENCFF993AAD/@@download/ENCFF993AAD.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF613DTQ bed narrowPeak optimal idr thresholded peaks ENCSR000BPM ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol YY1-human ENCAB000ANT DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF243GJY, ENCFF277ALQ, ENCFF419RSJ, ENCFF809KZO 301674 ENCODE Processing Pipeline 6766d9ba9edfc71882e12b451d9f8763 https://www.encodeproject.org/files/ENCFF613DTQ/@@download/ENCFF613DTQ.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OGZ bam alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OHH 647269454 Richard Myers, HAIB a6b5132b35204d66234e725e207fc24e https://www.encodeproject.org/files/ENCFF000OGZ/@@download/ENCFF000OGZ.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OHA bigBed broadPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZO 1256006 Richard Myers, HAIB 885d977682cfbd552205977a888396d0 https://www.encodeproject.org/files/ENCFF000OHA/@@download/ENCFF000OHA.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OHB bigBed broadPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZP 659676 Richard Myers, HAIB d3f7f3e07e0560afa5c010666fddb5b0 https://www.encodeproject.org/files/ENCFF000OHB/@@download/ENCFF000OHB.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OHC bam alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OHO 904794966 Richard Myers, HAIB f092e703dcadae39bc6b23822d35cf98 https://www.encodeproject.org/files/ENCFF000OHC/@@download/ENCFF000OHC.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OHE bigWig raw signal ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 26317942 Richard Myers, HAIB cc27a689917814fcecee01016d61448a https://www.encodeproject.org/files/ENCFF000OHE/@@download/ENCFF000OHE.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OHF bigWig raw signal ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 25047592 Richard Myers, HAIB 07d05eeda195d75fefed7265e5db2fd9 https://www.encodeproject.org/files/ENCFF000OHF/@@download/ENCFF000OHF.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OHH fastq reads ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 581477238 Richard Myers, HAIB 0b60c6268a7255ea7ae942a6215682fb https://www.encodeproject.org/files/ENCFF000OHH/@@download/ENCFF000OHH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OHO fastq reads ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 863934127 Richard Myers, HAIB da8e48228be3f8a5fea131d51b22f9d2 https://www.encodeproject.org/files/ENCFF000OHO/@@download/ENCFF000OHO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TZO bed broadPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 666520 Richard Myers, HAIB a29950c6492e8c0d60cd220391c33357 https://www.encodeproject.org/files/ENCFF001TZO/@@download/ENCFF001TZO.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TZP bed broadPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 416373 Richard Myers, HAIB cfc701d0becf42a3175acd850cf8bf80 https://www.encodeproject.org/files/ENCFF001TZP/@@download/ENCFF001TZP.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CIC bed narrowPeak optimal idr thresholded peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 613066 ENCODE Consortium Analysis Working Group 0eccf0b1b1a664b0b0dcef0493189e47 https://www.encodeproject.org/files/ENCFF002CIC/@@download/ENCFF002CIC.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF042DNE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE ENCFF002CIC 1287683 ENCODE Consortium 4d11dd335c3360cddf8df1c0138525ac https://www.encodeproject.org/files/ENCFF042DNE/@@download/ENCFF042DNE.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF289YVM bam alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OHH, ENCFF643CGH 442490409 ENCODE Processing Pipeline 37fd30462d8d41f254c0eb0e4b337018 https://www.encodeproject.org/files/ENCFF289YVM/@@download/ENCFF289YVM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF407NZY bam unfiltered alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OHH, ENCFF643CGH 782971031 ENCODE Processing Pipeline bb16713de0b8a39f8a16c98fc5e3c575 https://www.encodeproject.org/files/ENCFF407NZY/@@download/ENCFF407NZY.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF363ZTA bam unfiltered alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OHO, ENCFF643CGH 1112071793 ENCODE Processing Pipeline 072ae3bdce868640c3e59b2d72e4f4fe https://www.encodeproject.org/files/ENCFF363ZTA/@@download/ENCFF363ZTA.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF163HDB bam alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OHO, ENCFF643CGH 639062899 ENCODE Processing Pipeline 99daa5cff601df1f27f366e87e907180 https://www.encodeproject.org/files/ENCFF163HDB/@@download/ENCFF163HDB.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF975UGB bam unfiltered alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OHH, ENCFF807MUK 784451815 ENCODE Processing Pipeline e0d8ffbf24481482cb956a3edb09ce98 https://www.encodeproject.org/files/ENCFF975UGB/@@download/ENCFF975UGB.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF180NKF bam alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OHH, ENCFF807MUK 438673705 ENCODE Processing Pipeline 227ffc1b331aae4aca01d8712b9f8436 https://www.encodeproject.org/files/ENCFF180NKF/@@download/ENCFF180NKF.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF004ZLO bam alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OHO, ENCFF807MUK 633611087 ENCODE Processing Pipeline be07d469c7d4a64d93c44711a4787018 https://www.encodeproject.org/files/ENCFF004ZLO/@@download/ENCFF004ZLO.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF448GPH bam unfiltered alignments ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OHO, ENCFF807MUK 1111772301 ENCODE Processing Pipeline cf44fc4f48c1e04cd98e6bce031eb251 https://www.encodeproject.org/files/ENCFF448GPH/@@download/ENCFF448GPH.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF891FDD bigWig signal p-value ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289YVM, ENCFF488YYE, ENCFF562HPN 588763568 ENCODE Processing Pipeline 59e2acbc1c34728d37ed20fd29d00309 https://www.encodeproject.org/files/ENCFF891FDD/@@download/ENCFF891FDD.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF510LGI bigWig fold change over control ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289YVM, ENCFF488YYE, ENCFF562HPN 335838617 ENCODE Processing Pipeline 78ee25dfd1a236f21d68f6e0fd85eccf https://www.encodeproject.org/files/ENCFF510LGI/@@download/ENCFF510LGI.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF722WRN bigWig signal p-value ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF163HDB, ENCFF289YVM, ENCFF488YYE, ENCFF562HPN 833402735 ENCODE Processing Pipeline b472977be83d244076ce49b5e471ad13 https://www.encodeproject.org/files/ENCFF722WRN/@@download/ENCFF722WRN.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF674NNU bigWig signal p-value ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF163HDB, ENCFF488YYE, ENCFF562HPN 708870408 ENCODE Processing Pipeline f48bf047bbee637f9b9abec57a0afc43 https://www.encodeproject.org/files/ENCFF674NNU/@@download/ENCFF674NNU.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF684PCV bigWig fold change over control ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF163HDB, ENCFF488YYE, ENCFF562HPN 414743977 ENCODE Processing Pipeline 62a3af623216f7c3892b42eb09d84579 https://www.encodeproject.org/files/ENCFF684PCV/@@download/ENCFF684PCV.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF666IGK bed narrowPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289YVM, ENCFF488YYE, ENCFF562HPN 5542575 ENCODE Processing Pipeline 2cfc97e21b2137c273877dc178e44511 https://www.encodeproject.org/files/ENCFF666IGK/@@download/ENCFF666IGK.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF140ADI bed narrowPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF163HDB, ENCFF488YYE, ENCFF562HPN 5752082 ENCODE Processing Pipeline a78861e998a19801700488edfd516ab4 https://www.encodeproject.org/files/ENCFF140ADI/@@download/ENCFF140ADI.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF683NGY bigWig fold change over control ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF163HDB, ENCFF289YVM, ENCFF488YYE, ENCFF562HPN 623187294 ENCODE Processing Pipeline ae25fbac7db02cfbc34dd4738a2a614a https://www.encodeproject.org/files/ENCFF683NGY/@@download/ENCFF683NGY.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF985NQM bed narrowPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF163HDB, ENCFF289YVM, ENCFF488YYE, ENCFF562HPN 6262989 ENCODE Processing Pipeline 23ff238f106741906d9ffd7c02b6288f https://www.encodeproject.org/files/ENCFF985NQM/@@download/ENCFF985NQM.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF197NLU bigBed narrowPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF666IGK 12762415 ENCODE Processing Pipeline e008580df5b44455c579f2bf75764465 https://www.encodeproject.org/files/ENCFF197NLU/@@download/ENCFF197NLU.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF421WJC bigBed narrowPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140ADI 12993601 ENCODE Processing Pipeline 8ef957e626f5c9e80ce18216f8a47df8 https://www.encodeproject.org/files/ENCFF421WJC/@@download/ENCFF421WJC.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF560KGH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF223MUF 979646 ENCODE Processing Pipeline add5680f557e3966da4c11af6fcd27bd https://www.encodeproject.org/files/ENCFF560KGH/@@download/ENCFF560KGH.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF260TXW bigBed narrowPeak peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF985NQM 12984316 ENCODE Processing Pipeline a5aeeae924e2c0bb6b1d1eb16411269e https://www.encodeproject.org/files/ENCFF260TXW/@@download/ENCFF260TXW.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF271FAK bed narrowPeak conservative idr thresholded peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140ADI, ENCFF419RSJ, ENCFF666IGK, ENCFF985NQM 564924 ENCODE Processing Pipeline 4c48fa0a73b3b920825a68d73dd98c5c https://www.encodeproject.org/files/ENCFF271FAK/@@download/ENCFF271FAK.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF197UNQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF271FAK 940725 ENCODE Processing Pipeline d3ca02abbdea58381e421cb059aec09d https://www.encodeproject.org/files/ENCFF197UNQ/@@download/ENCFF197UNQ.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF223MUF bed narrowPeak optimal idr thresholded peaks ENCSR000BNP ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140ADI, ENCFF419RSJ, ENCFF666IGK, ENCFF985NQM 595214 ENCODE Processing Pipeline e0c1a03030d40720438ac80e3b88653f https://www.encodeproject.org/files/ENCFF223MUF/@@download/ENCFF223MUF.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF634YGY fastq reads ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 1 50 single-ended 1522057961 Richard Myers, HAIB 29bc7c04b434d7505a65c1507ec6bebc SRA:SRR5338762 https://www.encodeproject.org/files/ENCFF634YGY/@@download/ENCFF634YGY.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF244DVW fastq reads ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 1 50 single-ended 1302821527 Richard Myers, HAIB e7a0a463234705ff8e9a359b776235bb SRA:SRR5338761 https://www.encodeproject.org/files/ENCFF244DVW/@@download/ENCFF244DVW.fastq.gz HiSeq 2000 /files/ENCFF247MLF/ released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF679ZOV bam alignments ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 50 ENCFF634YGY, ENCFF807MUK 1208595180 ENCODE Processing Pipeline c8b6cc3d0f2e77f003e7a0097a30cc8f https://www.encodeproject.org/files/ENCFF679ZOV/@@download/ENCFF679ZOV.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF140FDZ bam alignments ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 50 ENCFF244DVW, ENCFF807MUK 1023915522 ENCODE Processing Pipeline 70563467b04d9d88e2b10b9dccf577b1 https://www.encodeproject.org/files/ENCFF140FDZ/@@download/ENCFF140FDZ.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF300YTE bigWig signal p-value ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF140FDZ, ENCFF871NUZ 654051446 ENCODE Processing Pipeline 945bf7b4914970c280aebfa25dcf2d2f https://www.encodeproject.org/files/ENCFF300YTE/@@download/ENCFF300YTE.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF685MHA bigWig signal p-value ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF321UJV, ENCFF679ZOV 593416998 ENCODE Processing Pipeline 656299fe65439d39dc5c02520abbde72 https://www.encodeproject.org/files/ENCFF685MHA/@@download/ENCFF685MHA.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF007JYW bigWig signal p-value ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF140FDZ, ENCFF321UJV, ENCFF679ZOV, ENCFF871NUZ 1125281398 ENCODE Processing Pipeline f588c44db1a14d8d8141268afb04ad21 https://www.encodeproject.org/files/ENCFF007JYW/@@download/ENCFF007JYW.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF469UUV bigWig fold change over control ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF321UJV, ENCFF679ZOV 631718567 ENCODE Processing Pipeline 0f171e6d1fec7acc97f9c8a9ee4181af https://www.encodeproject.org/files/ENCFF469UUV/@@download/ENCFF469UUV.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF264PQZ bigWig fold change over control ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF140FDZ, ENCFF871NUZ 618181475 ENCODE Processing Pipeline bbe680c2ca0a22c0dd503d33dc08ab65 https://www.encodeproject.org/files/ENCFF264PQZ/@@download/ENCFF264PQZ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF269NAU bigWig fold change over control ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF140FDZ, ENCFF321UJV, ENCFF679ZOV, ENCFF871NUZ 1270817963 ENCODE Processing Pipeline 007064487d3792de8a25ce4dca21f14d https://www.encodeproject.org/files/ENCFF269NAU/@@download/ENCFF269NAU.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF061SPB bed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF321UJV, ENCFF679ZOV 6554758 ENCODE Processing Pipeline 22e0f0e2365c35a539a3b4e0a3c695c2 https://www.encodeproject.org/files/ENCFF061SPB/@@download/ENCFF061SPB.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF335ZZX bed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF140FDZ, ENCFF871NUZ 6592953 ENCODE Processing Pipeline ddb424f59e5fc822d1779b7d9f955e99 https://www.encodeproject.org/files/ENCFF335ZZX/@@download/ENCFF335ZZX.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF800NJQ bed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF140FDZ, ENCFF321UJV, ENCFF679ZOV, ENCFF871NUZ 7173337 ENCODE Processing Pipeline 64c61463dfb3d7153bcc46ce429f31d7 https://www.encodeproject.org/files/ENCFF800NJQ/@@download/ENCFF800NJQ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF272NDT bigBed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF335ZZX 12984045 ENCODE Processing Pipeline 461477ae887e93baf17bfd3b28a894b0 https://www.encodeproject.org/files/ENCFF272NDT/@@download/ENCFF272NDT.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF900TNM bigBed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF800NJQ 13216364 ENCODE Processing Pipeline 401f939f9acd0957f6cecedfb6837e26 https://www.encodeproject.org/files/ENCFF900TNM/@@download/ENCFF900TNM.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF056YSA bigBed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF061SPB 13110963 ENCODE Processing Pipeline 03cc3ba77a4775f12236d1243e6551e3 https://www.encodeproject.org/files/ENCFF056YSA/@@download/ENCFF056YSA.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF388IBA bam unfiltered alignments ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 50 ENCFF634YGY, ENCFF643CGH 1636770772 ENCODE Processing Pipeline 8f26ec5a7f8859c57bc94c1563d2c099 https://www.encodeproject.org/files/ENCFF388IBA/@@download/ENCFF388IBA.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF488ZUW bam unfiltered alignments ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 50 ENCFF244DVW, ENCFF643CGH 1404633596 ENCODE Processing Pipeline 19221ee6265f7e37ba62ae6f66a92b36 https://www.encodeproject.org/files/ENCFF488ZUW/@@download/ENCFF488ZUW.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF475YAS bam alignments ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 50 ENCFF244DVW, ENCFF643CGH 1023738747 ENCODE Processing Pipeline 80e072d04e32d74e896a01354abfca6c https://www.encodeproject.org/files/ENCFF475YAS/@@download/ENCFF475YAS.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF168KFH bam alignments ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 50 ENCFF634YGY, ENCFF643CGH 1208466148 ENCODE Processing Pipeline 7988062d5124fc1cc1cb2e6ef7783485 https://www.encodeproject.org/files/ENCFF168KFH/@@download/ENCFF168KFH.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF396IYJ bigWig signal p-value ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF168KFH, ENCFF610PNU 646770379 ENCODE Processing Pipeline 64ee646bfebb240d711100905b612ea4 https://www.encodeproject.org/files/ENCFF396IYJ/@@download/ENCFF396IYJ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF196IBD bigWig signal p-value ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF259AXY, ENCFF475YAS 599202019 ENCODE Processing Pipeline 9ca1e1f0991739e5ed49385aaf143bca https://www.encodeproject.org/files/ENCFF196IBD/@@download/ENCFF196IBD.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF341WIV bigWig signal p-value ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF168KFH, ENCFF259AXY, ENCFF475YAS, ENCFF610PNU 1005261413 ENCODE Processing Pipeline cb3a0af943054f381cf64a27862d5cf8 https://www.encodeproject.org/files/ENCFF341WIV/@@download/ENCFF341WIV.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF435IZM bigWig fold change over control ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF259AXY, ENCFF475YAS 624144539 ENCODE Processing Pipeline e32e226cc822b6571d71a3589e74b226 https://www.encodeproject.org/files/ENCFF435IZM/@@download/ENCFF435IZM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF921SNH bigWig fold change over control ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF168KFH, ENCFF610PNU 632609332 ENCODE Processing Pipeline 14d6b8a22689b6023441ff12a41ef389 https://www.encodeproject.org/files/ENCFF921SNH/@@download/ENCFF921SNH.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF057SLO bigWig fold change over control ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF168KFH, ENCFF259AXY, ENCFF475YAS, ENCFF610PNU 1259588094 ENCODE Processing Pipeline a096c4c777830ac9ad3718a0b4f9266b https://www.encodeproject.org/files/ENCFF057SLO/@@download/ENCFF057SLO.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF150WJN bed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF259AXY, ENCFF475YAS 6431705 ENCODE Processing Pipeline 5ccd5655582b42730008df8acf0490a2 https://www.encodeproject.org/files/ENCFF150WJN/@@download/ENCFF150WJN.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF927HII bed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF168KFH, ENCFF610PNU 6423332 ENCODE Processing Pipeline bc4a494fe1cccb9cb2d19113fb07a9cd https://www.encodeproject.org/files/ENCFF927HII/@@download/ENCFF927HII.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF196BJH bigBed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF150WJN 12993612 ENCODE Processing Pipeline 22a93a15757ea7363d0ef71502a97fa0 https://www.encodeproject.org/files/ENCFF196BJH/@@download/ENCFF196BJH.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF505BIK bed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF168KFH, ENCFF259AXY, ENCFF475YAS, ENCFF610PNU 7085788 ENCODE Processing Pipeline 2dc6daa6ebba8416e00abd27bf66b891 https://www.encodeproject.org/files/ENCFF505BIK/@@download/ENCFF505BIK.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF631ZVW bed narrowPeak conservative idr thresholded peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF150WJN, ENCFF419RSJ, ENCFF505BIK, ENCFF927HII 848773 ENCODE Processing Pipeline b5ed31d73946965a5727372e3aab6a96 https://www.encodeproject.org/files/ENCFF631ZVW/@@download/ENCFF631ZVW.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF459TWF bed narrowPeak optimal idr thresholded peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF150WJN, ENCFF419RSJ, ENCFF505BIK, ENCFF927HII 989651 ENCODE Processing Pipeline 9fd3879ab7a35281338c381a2c05f95d https://www.encodeproject.org/files/ENCFF459TWF/@@download/ENCFF459TWF.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF993VRB bigBed narrowPeak conservative idr thresholded peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF631ZVW 1859240 ENCODE Processing Pipeline 61108795b7dac3b3089cab139956b2b8 https://www.encodeproject.org/files/ENCFF993VRB/@@download/ENCFF993VRB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF661SJX bigBed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF927HII 13110866 ENCODE Processing Pipeline 46973f2b2a891ac4e464b1789e500155 https://www.encodeproject.org/files/ENCFF661SJX/@@download/ENCFF661SJX.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF562ROB bigBed narrowPeak peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF505BIK 13177184 ENCODE Processing Pipeline ca988626498bad2f79cc625b26cf3651 https://www.encodeproject.org/files/ENCFF562ROB/@@download/ENCFF562ROB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF719ELB bigBed narrowPeak optimal idr thresholded peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF459TWF 2113152 ENCODE Processing Pipeline cbca22479638521576d6f70141df46cf https://www.encodeproject.org/files/ENCFF719ELB/@@download/ENCFF719ELB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF603OCV bed narrowPeak optimal idr thresholded peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF061SPB, ENCFF335ZZX, ENCFF800NJQ 875622 ENCODE Processing Pipeline d4db56cba78dbb66b37446153ce0a506 https://www.encodeproject.org/files/ENCFF603OCV/@@download/ENCFF603OCV.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF612QWS bigBed narrowPeak optimal idr thresholded peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF603OCV 1530928 ENCODE Processing Pipeline 15b39ce8f8e8d0b1eaddd49f8e9e42bf https://www.encodeproject.org/files/ENCFF612QWS/@@download/ENCFF612QWS.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF026EYC bed narrowPeak conservative idr thresholded peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF061SPB, ENCFF335ZZX, ENCFF800NJQ 744952 ENCODE Processing Pipeline b1294229a288baf5e7ca6b107c14d398 https://www.encodeproject.org/files/ENCFF026EYC/@@download/ENCFF026EYC.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF826BFA bigBed narrowPeak conservative idr thresholded peaks ENCSR382MOM ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF026EYC 1354488 ENCODE Processing Pipeline 04721aedadbaa2d864c56ff5c8028e34 https://www.encodeproject.org/files/ENCFF826BFA/@@download/ENCFF826BFA.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample ENCFF000RFQ bam alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RGA 1014779972 Richard Myers, HAIB 37bed403b5302dfb37bba937052e34f6 https://www.encodeproject.org/files/ENCFF000RFQ/@@download/ENCFF000RFQ.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000RFR bigBed broadPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UQV 1697234 Richard Myers, HAIB b1e784dd23306e525be23ac3f95eeb02 https://www.encodeproject.org/files/ENCFF000RFR/@@download/ENCFF000RFR.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000RFS bigBed broadPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UQW 1625361 Richard Myers, HAIB a254b062b8a2e55909b5f82613fa27b8 https://www.encodeproject.org/files/ENCFF000RFS/@@download/ENCFF000RFS.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000RFT bam alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RGF 1096586558 Richard Myers, HAIB f623d75c4a392447789e560efc7d1884 https://www.encodeproject.org/files/ENCFF000RFT/@@download/ENCFF000RFT.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000RFW bigWig raw signal ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 63394041 Richard Myers, HAIB e77d0efcc559696b9777da91f5c38640 https://www.encodeproject.org/files/ENCFF000RFW/@@download/ENCFF000RFW.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000RFX bigWig raw signal ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 60100889 Richard Myers, HAIB 64feef80b2211dc3dfca5aee02d1a362 https://www.encodeproject.org/files/ENCFF000RFX/@@download/ENCFF000RFX.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000RGA fastq reads ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1048548763 Richard Myers, HAIB 01e217d898f11f4edacf790495ae55b1 https://www.encodeproject.org/files/ENCFF000RGA/@@download/ENCFF000RGA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RGI/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000RGF fastq reads ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1038359917 Richard Myers, HAIB 6f190e705a0008d8728fb0231590a4d0 https://www.encodeproject.org/files/ENCFF000RGF/@@download/ENCFF000RGF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RGI/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UQV bed broadPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 1247914 Richard Myers, HAIB f2dcbce5dd8fa07b530c721cc8ebc2bc https://www.encodeproject.org/files/ENCFF001UQV/@@download/ENCFF001UQV.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UQW bed broadPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 1104875 Richard Myers, HAIB c62330c91bb3d2ee04cbcdab5d6ac44a https://www.encodeproject.org/files/ENCFF001UQW/@@download/ENCFF001UQW.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CNQ bed narrowPeak optimal idr thresholded peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1253872 ENCODE Consortium Analysis Working Group 61137ce7d04dfac964b972832c1c0de4 https://www.encodeproject.org/files/ENCFF002CNQ/@@download/ENCFF002CNQ.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF937UYZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE ENCFF002CNQ 2646887 ENCODE Consortium a52384313fd47ed1ce3b6719eb1ec574 https://www.encodeproject.org/files/ENCFF937UYZ/@@download/ENCFF937UYZ.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF983URL bam unfiltered alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGA, ENCFF807MUK 1226662988 ENCODE Processing Pipeline 52d4ab9777f529baf97b21620d3156d9 https://www.encodeproject.org/files/ENCFF983URL/@@download/ENCFF983URL.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF628QPJ bam alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGA, ENCFF807MUK 613622703 ENCODE Processing Pipeline 357f0c3acce71cd504bdec3d8bf7aca4 https://www.encodeproject.org/files/ENCFF628QPJ/@@download/ENCFF628QPJ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF462LBM bam unfiltered alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGF, ENCFF807MUK 1266192115 ENCODE Processing Pipeline c6699f1aef6fbcee192ecc66bac453bf https://www.encodeproject.org/files/ENCFF462LBM/@@download/ENCFF462LBM.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF987ZHK bam alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGF, ENCFF807MUK 739532545 ENCODE Processing Pipeline 762e6cd9526e2dc9102a246e15f7430f https://www.encodeproject.org/files/ENCFF987ZHK/@@download/ENCFF987ZHK.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF988FFU bam unfiltered alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGF, ENCFF643CGH 1269253009 ENCODE Processing Pipeline b8b0c62e14b27dd45f3e6ce151e055ba https://www.encodeproject.org/files/ENCFF988FFU/@@download/ENCFF988FFU.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF385TLD bam unfiltered alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGA, ENCFF643CGH 1228549087 ENCODE Processing Pipeline a7ab8fd52b36e0743b95d831a8c24d7d https://www.encodeproject.org/files/ENCFF385TLD/@@download/ENCFF385TLD.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF928HIN bam alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RGA, ENCFF643CGH 613397078 ENCODE Processing Pipeline 8225bc8dc096598ec64a9248a2aa3954 https://www.encodeproject.org/files/ENCFF928HIN/@@download/ENCFF928HIN.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF903WEP bam alignments ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RGF, ENCFF643CGH 739266033 ENCODE Processing Pipeline d6061d341e2d786d2699ef57a59ad2de https://www.encodeproject.org/files/ENCFF903WEP/@@download/ENCFF903WEP.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF405NRA bigWig signal p-value ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF108EFL, ENCFF987ZHK 390541006 ENCODE Processing Pipeline 89d74c5dce548e55d12df0fc4f7d18dd https://www.encodeproject.org/files/ENCFF405NRA/@@download/ENCFF405NRA.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF416TQK bigWig fold change over control ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF108EFL, ENCFF987ZHK 323591170 ENCODE Processing Pipeline 4ff41ec5ec1087e494d0f394dc39b178 https://www.encodeproject.org/files/ENCFF416TQK/@@download/ENCFF416TQK.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF114SKT bed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF108EFL, ENCFF987ZHK 4964017 ENCODE Processing Pipeline 14e30d209048f8c2a2b76dbea75f6a35 https://www.encodeproject.org/files/ENCFF114SKT/@@download/ENCFF114SKT.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF098QUT bigBed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF114SKT 11108894 ENCODE Processing Pipeline db40bc63bcaaef28c0ad1f62246b5fe3 https://www.encodeproject.org/files/ENCFF098QUT/@@download/ENCFF098QUT.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF119DJG bigWig fold change over control ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF108EFL, ENCFF628QPJ 275304911 ENCODE Processing Pipeline da7d435f85f544a541143693d0973811 https://www.encodeproject.org/files/ENCFF119DJG/@@download/ENCFF119DJG.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF758GUY bed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF108EFL, ENCFF628QPJ, ENCFF987ZHK 6052140 ENCODE Processing Pipeline a9bc4154a104d2e2909849dd7cd79fc6 https://www.encodeproject.org/files/ENCFF758GUY/@@download/ENCFF758GUY.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF846NCI bed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF108EFL, ENCFF628QPJ 5162873 ENCODE Processing Pipeline 472a4291cdc2556eac9bb183aedca1eb https://www.encodeproject.org/files/ENCFF846NCI/@@download/ENCFF846NCI.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF468HIN bigBed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF846NCI 11121813 ENCODE Processing Pipeline eaf765993ed1bb99248d0094458dce43 https://www.encodeproject.org/files/ENCFF468HIN/@@download/ENCFF468HIN.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF087AGO bigBed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF758GUY 11857079 ENCODE Processing Pipeline 9e89f736befe12c1c7572cd546f6e90e https://www.encodeproject.org/files/ENCFF087AGO/@@download/ENCFF087AGO.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF987PUU bigWig signal p-value ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF108EFL, ENCFF628QPJ 439571624 ENCODE Processing Pipeline 7aedd9aeaed7bb88816f5a4d6c80d19c https://www.encodeproject.org/files/ENCFF987PUU/@@download/ENCFF987PUU.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF981CMV bigWig signal p-value ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF108EFL, ENCFF628QPJ, ENCFF987ZHK 492183575 ENCODE Processing Pipeline 0a2fedd007c6c869b576aa776bfb1be1 https://www.encodeproject.org/files/ENCFF981CMV/@@download/ENCFF981CMV.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF273OHO bigWig fold change over control ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF108EFL, ENCFF628QPJ, ENCFF987ZHK 510433207 ENCODE Processing Pipeline a00ea52a2b640ff536939cd96a66d767 https://www.encodeproject.org/files/ENCFF273OHO/@@download/ENCFF273OHO.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF874PNQ bed narrowPeak optimal idr thresholded peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF114SKT, ENCFF758GUY, ENCFF846NCI 1108510 ENCODE Processing Pipeline 6578f7d35c36ea6f9b39a78cd0131e2d https://www.encodeproject.org/files/ENCFF874PNQ/@@download/ENCFF874PNQ.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF526ANL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF874PNQ 1911327 ENCODE Processing Pipeline 61c116c96302c7fc5bb4a4fc3b6c02cb https://www.encodeproject.org/files/ENCFF526ANL/@@download/ENCFF526ANL.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF438GGB bigWig signal p-value ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF903WEP, ENCFF928HIN 492002592 ENCODE Processing Pipeline c9e15ab3c0891fc48b52753227954076 https://www.encodeproject.org/files/ENCFF438GGB/@@download/ENCFF438GGB.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF336HVO bed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF903WEP, ENCFF928HIN 6052798 ENCODE Processing Pipeline c2a04aeb1328eaadbd189013ccf44d25 https://www.encodeproject.org/files/ENCFF336HVO/@@download/ENCFF336HVO.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF315VKB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF557OCR 1915211 ENCODE Processing Pipeline 0f017c77fca275aa8bbd86431c6b4919 https://www.encodeproject.org/files/ENCFF315VKB/@@download/ENCFF315VKB.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF766YWH bigWig fold change over control ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF928HIN 274998893 ENCODE Processing Pipeline 4239f377625ac44ba4fe3428ec5da45e https://www.encodeproject.org/files/ENCFF766YWH/@@download/ENCFF766YWH.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF136ITI bed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF928HIN 5161087 ENCODE Processing Pipeline ba50fb1b881972e60fcde9b6536b1112 https://www.encodeproject.org/files/ENCFF136ITI/@@download/ENCFF136ITI.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF649YAE bed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF903WEP 5070958 ENCODE Processing Pipeline 044fbe8be334b4f0515bd03b0c8cc8df https://www.encodeproject.org/files/ENCFF649YAE/@@download/ENCFF649YAE.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF716RDP bigBed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF649YAE 11253199 ENCODE Processing Pipeline c72c8640e3025768d55764982acd3b5b https://www.encodeproject.org/files/ENCFF716RDP/@@download/ENCFF716RDP.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF557OCR bed narrowPeak optimal idr thresholded peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF136ITI, ENCFF336HVO, ENCFF419RSJ, ENCFF649YAE 1109836 ENCODE Processing Pipeline c1180631fc589bda74c31aa189e676cf https://www.encodeproject.org/files/ENCFF557OCR/@@download/ENCFF557OCR.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF705TOU bigWig signal p-value ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF077ITP, ENCFF928HIN 440466190 ENCODE Processing Pipeline aa3b971b0bddbfb01426c5e15887a297 https://www.encodeproject.org/files/ENCFF705TOU/@@download/ENCFF705TOU.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF179OTI bigWig signal p-value ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF903WEP 426368125 ENCODE Processing Pipeline 77a7ec8c836dd084fcec1b38ea24611d https://www.encodeproject.org/files/ENCFF179OTI/@@download/ENCFF179OTI.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF819MOD bigWig fold change over control ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077ITP, ENCFF903WEP 323455214 ENCODE Processing Pipeline 854763f5d4c7377f2304422f06ebeeb1 https://www.encodeproject.org/files/ENCFF819MOD/@@download/ENCFF819MOD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF087JUG bigWig fold change over control ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077ITP, ENCFF903WEP, ENCFF928HIN 510949569 ENCODE Processing Pipeline 381ea3f64493c46cf11ceb9c800d0625 https://www.encodeproject.org/files/ENCFF087JUG/@@download/ENCFF087JUG.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF804EUE bigBed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF136ITI 11120727 ENCODE Processing Pipeline 5da6e62756bd6f0aadb0c24514ecf06d https://www.encodeproject.org/files/ENCFF804EUE/@@download/ENCFF804EUE.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF156WOV bigBed narrowPeak peaks ENCSR000BLY ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF336HVO 11858038 ENCODE Processing Pipeline 0e40aa58a6e7a2ccb70daf9aa7ca4c27 https://www.encodeproject.org/files/ENCFF156WOV/@@download/ENCFF156WOV.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF483MLV fastq reads ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF745ORG 2180006470 Richard Myers, HAIB fdafdd18ce21e2662e0c08fd05eefa46 https://www.encodeproject.org/files/ENCFF483MLV/@@download/ENCFF483MLV.fastq.gz HiSeq 2000 /files/ENCFF371ASL/ released antibody characterized with exemption experiment not submitted to GEO ENCFF745ORG fastq reads ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF483MLV 2270664739 Richard Myers, HAIB fc02a457ec0c306f0021960ee56e105a https://www.encodeproject.org/files/ENCFF745ORG/@@download/ENCFF745ORG.fastq.gz HiSeq 2000 /files/ENCFF631HIV/ released antibody characterized with exemption experiment not submitted to GEO ENCFF566JWZ bam unfiltered alignments ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF483MLV, ENCFF745ORG, ENCFF807MUK 4690745306 ENCODE Processing Pipeline 80e297373e56786cd8ee06fa9ac9fc0e https://www.encodeproject.org/files/ENCFF566JWZ/@@download/ENCFF566JWZ.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF264SIT bam unfiltered alignments ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF483MLV, ENCFF643CGH, ENCFF745ORG 4693369795 ENCODE Processing Pipeline 6a0807716e7c6eabb7ff2cbdfdc07f09 https://www.encodeproject.org/files/ENCFF264SIT/@@download/ENCFF264SIT.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF983SGW bam alignments ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF483MLV, ENCFF745ORG, ENCFF807MUK 3301383891 ENCODE Processing Pipeline 26e9aaeceeba3b45e42d416ee6f8f7bf https://www.encodeproject.org/files/ENCFF983SGW/@@download/ENCFF983SGW.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF623VUZ bam alignments ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF483MLV, ENCFF643CGH, ENCFF745ORG 3300449029 ENCODE Processing Pipeline 50fc79194d386a3a451b8fbf341a7a15 https://www.encodeproject.org/files/ENCFF623VUZ/@@download/ENCFF623VUZ.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF128PQG bed narrowPeak peaks ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF623VUZ, ENCFF803PDD 6442004 ENCODE Processing Pipeline 3ce6ca2bba714dc466850c6ab9f0ebcf https://www.encodeproject.org/files/ENCFF128PQG/@@download/ENCFF128PQG.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF112GTB bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF128PQG, ENCFF419RSJ 1322602 ENCODE Processing Pipeline 0bde796473c5d3a40e8386a9c9e7bd5d https://www.encodeproject.org/files/ENCFF112GTB/@@download/ENCFF112GTB.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF202FHK bigWig signal p-value ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF623VUZ, ENCFF803PDD 1113081014 ENCODE Processing Pipeline 1c2520e7c9a5e2bc93a6d65531fe7a6e https://www.encodeproject.org/files/ENCFF202FHK/@@download/ENCFF202FHK.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF294WYN bigWig fold change over control ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF623VUZ, ENCFF803PDD 571203980 ENCODE Processing Pipeline ba8290941f13e82c88d724e5f3493352 https://www.encodeproject.org/files/ENCFF294WYN/@@download/ENCFF294WYN.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF625TME bigBed narrowPeak peaks ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF128PQG 11568771 ENCODE Processing Pipeline 73818b49c5eeb38b3065013e0b1ce48b https://www.encodeproject.org/files/ENCFF625TME/@@download/ENCFF625TME.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF731QNN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF112GTB 2473648 ENCODE Processing Pipeline 0a7fa01d963fb1ed90d5035ee3023e46 https://www.encodeproject.org/files/ENCFF731QNN/@@download/ENCFF731QNN.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF946SLI bigWig fold change over control ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF267HPF, ENCFF983SGW 571591565 ENCODE Processing Pipeline baab1abaf2d5190e2ea1c0f693134506 https://www.encodeproject.org/files/ENCFF946SLI/@@download/ENCFF946SLI.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF747YTO bigBed narrowPeak peaks ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF065MTT 12067025 ENCODE Processing Pipeline 325e992cbd719426e420b7622fa47b68 https://www.encodeproject.org/files/ENCFF747YTO/@@download/ENCFF747YTO.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF999KYS bigWig signal p-value ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF267HPF, ENCFF983SGW 1026855653 ENCODE Processing Pipeline bb91e2a098d57172dc1a62fec0e1a1b2 https://www.encodeproject.org/files/ENCFF999KYS/@@download/ENCFF999KYS.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF305QEN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF979BDX 2470691 ENCODE Processing Pipeline 61aff374b26b24e78e9a8cc74ab944e8 https://www.encodeproject.org/files/ENCFF305QEN/@@download/ENCFF305QEN.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF979BDX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF065MTT 1320964 ENCODE Processing Pipeline 412ea07bbceacf259f0a1366667ad5f8 https://www.encodeproject.org/files/ENCFF979BDX/@@download/ENCFF979BDX.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF065MTT bed narrowPeak peaks ENCSR350PUV ChIP-seq UBERON:0002106 spleen tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF267HPF, ENCFF983SGW 6807105 ENCODE Processing Pipeline 414146b6dd2b4f0a7f6021a7cab28692 https://www.encodeproject.org/files/ENCFF065MTT/@@download/ENCFF065MTT.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF678KER fastq reads ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF547VRG 1696720508 Richard Myers, HAIB 0bc19577a9ad60f0ac25118aab2dbcf1 SRA:SRR6212852 https://www.encodeproject.org/files/ENCFF678KER/@@download/ENCFF678KER.fastq.gz HiSeq 2000 /files/ENCFF048DAV/ released antibody characterized with exemption ENCFF547VRG fastq reads ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF678KER 1620131135 Richard Myers, HAIB 4bfbbde7b69d49c0aad1d48b2f62cb6a SRA:SRR6212852 https://www.encodeproject.org/files/ENCFF547VRG/@@download/ENCFF547VRG.fastq.gz HiSeq 2000 /files/ENCFF991XBB/ released antibody characterized with exemption ENCFF151WOC bam unfiltered alignments ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF547VRG, ENCFF678KER, ENCFF807MUK 4103418714 ENCODE Processing Pipeline 1354bd2473b1f93af70da10ed20d5a30 https://www.encodeproject.org/files/ENCFF151WOC/@@download/ENCFF151WOC.bam hg19 released antibody characterized with exemption ENCFF782VOH bam alignments ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF547VRG, ENCFF678KER, ENCFF807MUK 3111117233 ENCODE Processing Pipeline d5cc05767e6d26f1d5e5413d2125c305 https://www.encodeproject.org/files/ENCFF782VOH/@@download/ENCFF782VOH.bam hg19 released antibody characterized with exemption ENCFF516AQU bam unfiltered alignments ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF547VRG, ENCFF643CGH, ENCFF678KER 4123337126 ENCODE Processing Pipeline dd10aa740ef302d318020a29886fc385 https://www.encodeproject.org/files/ENCFF516AQU/@@download/ENCFF516AQU.bam GRCh38 released antibody characterized with exemption ENCFF310SVP bam alignments ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF547VRG, ENCFF643CGH, ENCFF678KER 3113530448 ENCODE Processing Pipeline 0c01063061505fd381a997688d75c357 https://www.encodeproject.org/files/ENCFF310SVP/@@download/ENCFF310SVP.bam GRCh38 released antibody characterized with exemption ENCFF143FVV bigWig signal p-value ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF310SVP 1236479084 ENCODE Processing Pipeline 2837fb26d789f7fe8461857ead1a37f6 https://www.encodeproject.org/files/ENCFF143FVV/@@download/ENCFF143FVV.bigWig GRCh38 released antibody characterized with exemption ENCFF507KPJ bed narrowPeak peaks ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF310SVP 5703475 ENCODE Processing Pipeline 2dd6ea3dfa7e8d1b462f33fe3ba7144e https://www.encodeproject.org/files/ENCFF507KPJ/@@download/ENCFF507KPJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF763AVY bigWig fold change over control ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF310SVP 1222792912 ENCODE Processing Pipeline aa9fc79d27b51e266788df8708f3cd91 https://www.encodeproject.org/files/ENCFF763AVY/@@download/ENCFF763AVY.bigWig GRCh38 released antibody characterized with exemption ENCFF970XBE bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF507KPJ 12931 ENCODE Processing Pipeline d77624d592eb661316310014014ec27f https://www.encodeproject.org/files/ENCFF970XBE/@@download/ENCFF970XBE.bed.gz GRCh38 released antibody characterized with exemption ENCFF631SGR bigBed narrowPeak peaks ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF507KPJ 11891380 ENCODE Processing Pipeline eb00a98c68b4f02f94a6c5c120a0acc1 https://www.encodeproject.org/files/ENCFF631SGR/@@download/ENCFF631SGR.bigBed GRCh38 released antibody characterized with exemption ENCFF918EUW bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF970XBE 83586 ENCODE Processing Pipeline e4c468d43b911d2448f82c12d556e36d https://www.encodeproject.org/files/ENCFF918EUW/@@download/ENCFF918EUW.bigBed GRCh38 released antibody characterized with exemption ENCFF187OOO bigWig signal p-value ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF782VOH 1279907208 ENCODE Processing Pipeline e84c571eeb312d7b070a7a43075f6216 https://www.encodeproject.org/files/ENCFF187OOO/@@download/ENCFF187OOO.bigWig hg19 released antibody characterized with exemption ENCFF745RJC bigWig fold change over control ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF782VOH 1220329409 ENCODE Processing Pipeline 1f32b7838760b9b79d9f06584a6db21d https://www.encodeproject.org/files/ENCFF745RJC/@@download/ENCFF745RJC.bigWig hg19 released antibody characterized with exemption ENCFF484FFT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF057IJK 81899 ENCODE Processing Pipeline d5ec79e8378fc5275f5b424f739659d9 https://www.encodeproject.org/files/ENCFF484FFT/@@download/ENCFF484FFT.bigBed hg19 released antibody characterized with exemption ENCFF057IJK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF987RLN 12710 ENCODE Processing Pipeline 773e062c56e8c8bdf46fe8ac6483d89e https://www.encodeproject.org/files/ENCFF057IJK/@@download/ENCFF057IJK.bed.gz hg19 released antibody characterized with exemption ENCFF448NZR bigBed narrowPeak peaks ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF987RLN 11871858 ENCODE Processing Pipeline bcbc4fa5ced890e80ca735185b8d6aa3 https://www.encodeproject.org/files/ENCFF448NZR/@@download/ENCFF448NZR.bigBed hg19 released antibody characterized with exemption ENCFF987RLN bed narrowPeak peaks ENCSR158TRP ChIP-seq UBERON:0000992 ovary tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF782VOH 5702107 ENCODE Processing Pipeline 1d3bf3a05b1216602a3795be6f6f0e85 https://www.encodeproject.org/files/ENCFF987RLN/@@download/ENCFF987RLN.bed.gz hg19 released antibody characterized with exemption ENCFF000QWP bam alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QWZ 123133562 Richard Myers, HAIB f00ef0f6be359db08de7289cc54b8851 https://www.encodeproject.org/files/ENCFF000QWP/@@download/ENCFF000QWP.bam hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000QWR bigBed broadPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UOX 1050001 Richard Myers, HAIB 54f09d2df7fb837e66ac1c42906ea5ec https://www.encodeproject.org/files/ENCFF000QWR/@@download/ENCFF000QWR.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000QWS bigBed broadPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UOY 738888 Richard Myers, HAIB bb8044527b3951a83723ab1815ddf706 https://www.encodeproject.org/files/ENCFF000QWS/@@download/ENCFF000QWS.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000QWT bam alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QXE 1822272823 Richard Myers, HAIB 0cf6bc6eda139e0fcfb26ed7118d7d6d https://www.encodeproject.org/files/ENCFF000QWT/@@download/ENCFF000QWT.bam hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000QWU bigWig raw signal ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 31437618 Richard Myers, HAIB 8a07f4dcfee16c100a6202f9622e46a1 https://www.encodeproject.org/files/ENCFF000QWU/@@download/ENCFF000QWU.bigWig hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF000QWV bigWig raw signal ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 50696570 Richard Myers, HAIB 19bf914dab9a17b3f7c6dd849a947b28 https://www.encodeproject.org/files/ENCFF000QWV/@@download/ENCFF000QWV.bigWig hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF000QWZ fastq reads ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 454914918 Richard Myers, HAIB 4c6d34a4c402efa7941eed2062ee8830 https://www.encodeproject.org/files/ENCFF000QWZ/@@download/ENCFF000QWZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QXL/ released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000QXE fastq reads ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1825001939 Richard Myers, HAIB 15a06555e9f5778fa94e56a543118a42 https://www.encodeproject.org/files/ENCFF000QXE/@@download/ENCFF000QXE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QXL/ released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF001UOX bed broadPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 528556 Richard Myers, HAIB e52ada3082ff078048789a2b4d98685d https://www.encodeproject.org/files/ENCFF001UOX/@@download/ENCFF001UOX.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UOY bed broadPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 481766 Richard Myers, HAIB ebc49e7aecd06a33b6fbe8ebd5a760ed https://www.encodeproject.org/files/ENCFF001UOY/@@download/ENCFF001UOY.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CNI bed narrowPeak optimal idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 572707 ENCODE Consortium Analysis Working Group 932f3a2778e0ddb4b1d5f1912a5416ce https://www.encodeproject.org/files/ENCFF002CNI/@@download/ENCFF002CNI.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample ENCFF312KDK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE ENCFF002CNI 1306819 ENCODE Consortium 3fd6e3cf16bf780e3d6c4576ecc19699 https://www.encodeproject.org/files/ENCFF312KDK/@@download/ENCFF312KDK.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF113PPG bam alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QWZ, ENCFF643CGH 433648575 ENCODE Processing Pipeline 25c01ef6c4935a9e7f833e8d38bf22a7 https://www.encodeproject.org/files/ENCFF113PPG/@@download/ENCFF113PPG.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF509LZW bam unfiltered alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QWZ, ENCFF643CGH 625251276 ENCODE Processing Pipeline 1634868d54dd0767236cf3baf65faff9 https://www.encodeproject.org/files/ENCFF509LZW/@@download/ENCFF509LZW.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF245BAO bam unfiltered alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QXE, ENCFF643CGH 1985889595 ENCODE Processing Pipeline e27c67d8d6f8c004a3856b240adde7b9 https://www.encodeproject.org/files/ENCFF245BAO/@@download/ENCFF245BAO.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF680VQE bam alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QXE, ENCFF643CGH 1234880565 ENCODE Processing Pipeline 5645dd4a92df0441c17fb1d48d2fed23 https://www.encodeproject.org/files/ENCFF680VQE/@@download/ENCFF680VQE.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF777OEQ bam unfiltered alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QWZ, ENCFF807MUK 624643959 ENCODE Processing Pipeline 91b2466f5a5e1053c067bd39f9763cbd https://www.encodeproject.org/files/ENCFF777OEQ/@@download/ENCFF777OEQ.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF691TYS bam alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QWZ, ENCFF807MUK 433898773 ENCODE Processing Pipeline 28774575045d2710dce303c952c890a9 https://www.encodeproject.org/files/ENCFF691TYS/@@download/ENCFF691TYS.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF388ZHJ bam unfiltered alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QXE, ENCFF807MUK 1979901929 ENCODE Processing Pipeline 1aff25af84f0db95c3c644665c2a05ff https://www.encodeproject.org/files/ENCFF388ZHJ/@@download/ENCFF388ZHJ.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF041ZFB bam alignments ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QXE, ENCFF807MUK 1235426041 ENCODE Processing Pipeline fcc5cb2a894ca216486f06899cde1e0c https://www.encodeproject.org/files/ENCFF041ZFB/@@download/ENCFF041ZFB.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF639DZB bed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF478FRJ, ENCFF680VQE 6193115 ENCODE Processing Pipeline 5269f9758395ba1c33923c6aeb8b702d https://www.encodeproject.org/files/ENCFF639DZB/@@download/ENCFF639DZB.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF992GIC bed narrowPeak conservative idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF065CIY, ENCFF110ALL, ENCFF419RSJ, ENCFF639DZB 262829 ENCODE Processing Pipeline 38a9e50f0b3e7444329077cd5cd881bf https://www.encodeproject.org/files/ENCFF992GIC/@@download/ENCFF992GIC.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF929WYQ bed narrowPeak optimal idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF065CIY, ENCFF110ALL, ENCFF419RSJ, ENCFF639DZB 547540 ENCODE Processing Pipeline b63bef17f3c06348899abdc56779946a https://www.encodeproject.org/files/ENCFF929WYQ/@@download/ENCFF929WYQ.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF382RCU bigWig signal p-value ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF113PPG, ENCFF478FRJ 472781186 ENCODE Processing Pipeline 618fee4f41fea4f9e5f0eb37d2cbac41 https://www.encodeproject.org/files/ENCFF382RCU/@@download/ENCFF382RCU.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF203WMV bigWig signal p-value ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF478FRJ, ENCFF680VQE 724716365 ENCODE Processing Pipeline 7ed7676a3f993b03f973bd37cf2c625c https://www.encodeproject.org/files/ENCFF203WMV/@@download/ENCFF203WMV.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF979GFY bigWig fold change over control ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF113PPG, ENCFF478FRJ 285509054 ENCODE Processing Pipeline b4cc49b3fbb5ee9ebb423b87dac90576 https://www.encodeproject.org/files/ENCFF979GFY/@@download/ENCFF979GFY.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF947RSV bigWig fold change over control ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF478FRJ, ENCFF680VQE 575449263 ENCODE Processing Pipeline dfdf0e1bdcf36fd4bbfd1dcd96af80ee https://www.encodeproject.org/files/ENCFF947RSV/@@download/ENCFF947RSV.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF435PZF bigWig fold change over control ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF113PPG, ENCFF478FRJ, ENCFF680VQE 753005268 ENCODE Processing Pipeline 58ef357c1e268d6d0140621c59d58666 https://www.encodeproject.org/files/ENCFF435PZF/@@download/ENCFF435PZF.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF726KGF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF929WYQ 1103569 ENCODE Processing Pipeline e698c3107e18b45db2062e7097479075 https://www.encodeproject.org/files/ENCFF726KGF/@@download/ENCFF726KGF.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF632OFK bigWig signal p-value ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF113PPG, ENCFF478FRJ, ENCFF680VQE 680585681 ENCODE Processing Pipeline c0eb2d731aff6e7aa993048335f03b4a https://www.encodeproject.org/files/ENCFF632OFK/@@download/ENCFF632OFK.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF110ALL bed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF113PPG, ENCFF478FRJ 6417124 ENCODE Processing Pipeline 31ffeb235187eb9fc6d1edf9161daf4c https://www.encodeproject.org/files/ENCFF110ALL/@@download/ENCFF110ALL.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF065CIY bed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF113PPG, ENCFF478FRJ, ENCFF680VQE 6998793 ENCODE Processing Pipeline ed84185b3821aeda4853d4951bc7e6ee https://www.encodeproject.org/files/ENCFF065CIY/@@download/ENCFF065CIY.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF714ZND bigBed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF110ALL 11713495 ENCODE Processing Pipeline 2ed43671b22acf350bfe9b4f455cdca0 https://www.encodeproject.org/files/ENCFF714ZND/@@download/ENCFF714ZND.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF071QMQ bigBed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF639DZB 13259893 ENCODE Processing Pipeline 147c344fe298609d9353d6e903eb0a89 https://www.encodeproject.org/files/ENCFF071QMQ/@@download/ENCFF071QMQ.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF454DIK bigBed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF065CIY 12786689 ENCODE Processing Pipeline 900b0e9e256aa6226379b1b379fb7815 https://www.encodeproject.org/files/ENCFF454DIK/@@download/ENCFF454DIK.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF020MBB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF992GIC 630934 ENCODE Processing Pipeline ab085164c329537d4815472ae1560c14 https://www.encodeproject.org/files/ENCFF020MBB/@@download/ENCFF020MBB.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF412ACC bed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF041ZFB, ENCFF691TYS, ENCFF863QPG 6999131 ENCODE Processing Pipeline 05640ae4ba20d591c210c144345ca3dc https://www.encodeproject.org/files/ENCFF412ACC/@@download/ENCFF412ACC.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF455WCH bigBed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF390NBA 13206132 ENCODE Processing Pipeline e959a34e6dde9109a854d729c0aac205 https://www.encodeproject.org/files/ENCFF455WCH/@@download/ENCFF455WCH.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF492MZG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF853WQL 630517 ENCODE Processing Pipeline 220bbf59f95ce740fce955c0c153fedc https://www.encodeproject.org/files/ENCFF492MZG/@@download/ENCFF492MZG.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF237GGQ bigWig signal p-value ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF041ZFB, ENCFF863QPG 567977919 ENCODE Processing Pipeline 123efd6cf82789ea46d2e9b3b182a244 https://www.encodeproject.org/files/ENCFF237GGQ/@@download/ENCFF237GGQ.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF816YXJ bigWig signal p-value ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF041ZFB, ENCFF691TYS, ENCFF863QPG 680976214 ENCODE Processing Pipeline fdf5b6d55ed881ba898bdb465ccfc71c https://www.encodeproject.org/files/ENCFF816YXJ/@@download/ENCFF816YXJ.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF814LSJ bigWig signal p-value ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF691TYS, ENCFF863QPG 474019669 ENCODE Processing Pipeline 84d5d119e1630f36d583c8ca0da3e68b https://www.encodeproject.org/files/ENCFF814LSJ/@@download/ENCFF814LSJ.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF152JEO bed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF691TYS, ENCFF863QPG 6416592 ENCODE Processing Pipeline 50347953b53bde9e7a6c7f21c2092984 https://www.encodeproject.org/files/ENCFF152JEO/@@download/ENCFF152JEO.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF390NBA bed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF041ZFB, ENCFF863QPG 6150432 ENCODE Processing Pipeline 9ced55e786aac370c68f2a0faf690ed2 https://www.encodeproject.org/files/ENCFF390NBA/@@download/ENCFF390NBA.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF959LOI bigWig fold change over control ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF691TYS, ENCFF863QPG 284349170 ENCODE Processing Pipeline 6b344938a549e0724109a74b7f400bc5 https://www.encodeproject.org/files/ENCFF959LOI/@@download/ENCFF959LOI.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF853WQL bed narrowPeak conservative idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF152JEO, ENCFF390NBA, ENCFF412ACC 262997 ENCODE Processing Pipeline dc7f9c89eff255c4b9df0aa6c7d542d1 https://www.encodeproject.org/files/ENCFF853WQL/@@download/ENCFF853WQL.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF436YJR bigWig fold change over control ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF041ZFB, ENCFF863QPG 577640673 ENCODE Processing Pipeline 8fa8aa261eb7bebac5d8db042b194468 https://www.encodeproject.org/files/ENCFF436YJR/@@download/ENCFF436YJR.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF837XVA bigWig fold change over control ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF041ZFB, ENCFF691TYS, ENCFF863QPG 753055609 ENCODE Processing Pipeline c7927f62180581fa85246abedfea5a4e https://www.encodeproject.org/files/ENCFF837XVA/@@download/ENCFF837XVA.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF180WRL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF606TCO 1106665 ENCODE Processing Pipeline 06c77688e5c1edbff4ebaf59a3d32f23 https://www.encodeproject.org/files/ENCFF180WRL/@@download/ENCFF180WRL.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF873DMA bigBed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF152JEO 11714266 ENCODE Processing Pipeline 071a75621ea50b0eb6e00c5455dcc440 https://www.encodeproject.org/files/ENCFF873DMA/@@download/ENCFF873DMA.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF606TCO bed narrowPeak optimal idr thresholded peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF152JEO, ENCFF390NBA, ENCFF412ACC 549407 ENCODE Processing Pipeline ef66cc29606f8a3b406239aed011c2d8 https://www.encodeproject.org/files/ENCFF606TCO/@@download/ENCFF606TCO.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF527MDH bigBed narrowPeak peaks ENCSR000BPL ChIP-seq EFO:0002860 SK-N-MC immortalized cell line child female 14 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF412ACC 12785650 ENCODE Processing Pipeline 6fb4949e6a7b4362a5e094baf8a02a78 https://www.encodeproject.org/files/ENCFF527MDH/@@download/ENCFF527MDH.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample ENCFF000OQL bam alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OQU 553508394 Richard Myers, HAIB 1dfcd76daca879dc371a154a913789c2 https://www.encodeproject.org/files/ENCFF000OQL/@@download/ENCFF000OQL.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OQN bigBed broadPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBU 109740 Richard Myers, HAIB 41346e2c22e528e6fb8872bb7a17cb06 https://www.encodeproject.org/files/ENCFF000OQN/@@download/ENCFF000OQN.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OQO bigBed broadPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBV 300846 Richard Myers, HAIB e77d860c5192d96836760dcc1e6fe634 https://www.encodeproject.org/files/ENCFF000OQO/@@download/ENCFF000OQO.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OQP bam alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000ORA 847101420 Richard Myers, HAIB 0413b4cc1142a21fe8d8eabd14896190 https://www.encodeproject.org/files/ENCFF000OQP/@@download/ENCFF000OQP.bam hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OQR bigWig raw signal ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 2880518 Richard Myers, HAIB ab9ccf0a469d299d9d370f8cdad5ece9 https://www.encodeproject.org/files/ENCFF000OQR/@@download/ENCFF000OQR.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OQS bigWig raw signal ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 9399712 Richard Myers, HAIB 7ff1784899dec66226d8047592f771f8 https://www.encodeproject.org/files/ENCFF000OQS/@@download/ENCFF000OQS.bigWig hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OQU fastq reads ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 473301981 Richard Myers, HAIB 6d6aaee552d932b87a5f61a8ea2c0ba7 https://www.encodeproject.org/files/ENCFF000OQU/@@download/ENCFF000OQU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000ORA fastq reads ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 721190381 Richard Myers, HAIB 8218764bdf238194a41ede535b680524 https://www.encodeproject.org/files/ENCFF000ORA/@@download/ENCFF000ORA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UBU bed broadPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 44095 Richard Myers, HAIB d284a8140197ac9ea2728ccd7d3630fe https://www.encodeproject.org/files/ENCFF001UBU/@@download/ENCFF001UBU.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UBV bed broadPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 175762 Richard Myers, HAIB a0d122a46d26b98be194f4ce99e00a0f https://www.encodeproject.org/files/ENCFF001UBV/@@download/ENCFF001UBV.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CJC bed narrowPeak optimal idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 172643 ENCODE Consortium Analysis Working Group 3ba20ad9a7095da9d8291d8161c18e87 https://www.encodeproject.org/files/ENCFF002CJC/@@download/ENCFF002CJC.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF242IAB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE ENCFF002CJC 381921 ENCODE Consortium df604ac9478ee094e317e27b5e0040b6 https://www.encodeproject.org/files/ENCFF242IAB/@@download/ENCFF242IAB.bigBed hg19 archived borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF796GKK bam unfiltered alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQU, ENCFF643CGH 650781473 ENCODE Processing Pipeline 9943baf53077b16d3b53ba2b42ef6c30 https://www.encodeproject.org/files/ENCFF796GKK/@@download/ENCFF796GKK.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF998ZIK bam alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQU, ENCFF643CGH 390861131 ENCODE Processing Pipeline 610024f03a08e92fb537337d071e7b36 https://www.encodeproject.org/files/ENCFF998ZIK/@@download/ENCFF998ZIK.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF299IMS bam alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORA, ENCFF643CGH 664615914 ENCODE Processing Pipeline 3bd39567ccd8180cf05fe8096983105c https://www.encodeproject.org/files/ENCFF299IMS/@@download/ENCFF299IMS.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF887YAK bam unfiltered alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORA, ENCFF643CGH 1027058276 ENCODE Processing Pipeline d5116f34d967cbf54924a36c2db22275 https://www.encodeproject.org/files/ENCFF887YAK/@@download/ENCFF887YAK.bam GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF355OYT bam unfiltered alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQU, ENCFF807MUK 648104854 ENCODE Processing Pipeline f138df62ac395b29b7d70055211b933c https://www.encodeproject.org/files/ENCFF355OYT/@@download/ENCFF355OYT.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF060WKJ bam alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQU, ENCFF807MUK 391131941 ENCODE Processing Pipeline 4339cd5dcb42807620d7bc637c4b4c27 https://www.encodeproject.org/files/ENCFF060WKJ/@@download/ENCFF060WKJ.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF123VAK bam alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORA, ENCFF807MUK 665029118 ENCODE Processing Pipeline 25309666ae8bdb573cc0d15bf6b58775 https://www.encodeproject.org/files/ENCFF123VAK/@@download/ENCFF123VAK.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF375WBL bam unfiltered alignments ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000ORA, ENCFF807MUK 1022843041 ENCODE Processing Pipeline 1832466f72e092bba9e433efac960e50 https://www.encodeproject.org/files/ENCFF375WBL/@@download/ENCFF375WBL.bam hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF052VZV bigWig signal p-value ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF998ZIK 365698476 ENCODE Processing Pipeline d4d8e7c75371ebd963b7ee4549e2fedf https://www.encodeproject.org/files/ENCFF052VZV/@@download/ENCFF052VZV.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF148QSK bigWig signal p-value ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF299IMS, ENCFF948LKH 481484468 ENCODE Processing Pipeline 2241adf7a7bebec4bfaa6c8758a5a2db https://www.encodeproject.org/files/ENCFF148QSK/@@download/ENCFF148QSK.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF020IGM bigWig fold change over control ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF998ZIK 240058977 ENCODE Processing Pipeline 7f35311ef2bf3b75c064990ea40faf6d https://www.encodeproject.org/files/ENCFF020IGM/@@download/ENCFF020IGM.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF800HRV bigWig signal p-value ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF299IMS, ENCFF948LKH, ENCFF998ZIK 551687620 ENCODE Processing Pipeline 4cdad298d47e3fe1c8652a079c5a567b https://www.encodeproject.org/files/ENCFF800HRV/@@download/ENCFF800HRV.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF646VRU bed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF998ZIK 3853110 ENCODE Processing Pipeline d04a82e569d772f2cd945992ed575fab https://www.encodeproject.org/files/ENCFF646VRU/@@download/ENCFF646VRU.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF211LTW bigWig fold change over control ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF299IMS, ENCFF948LKH 387501552 ENCODE Processing Pipeline 76b421ceebc21c73aee8ba6fe3c29719 https://www.encodeproject.org/files/ENCFF211LTW/@@download/ENCFF211LTW.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF404XEI bigBed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF646VRU 8198128 ENCODE Processing Pipeline 470a09374f731d51377b9095e68d01e9 https://www.encodeproject.org/files/ENCFF404XEI/@@download/ENCFF404XEI.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF033KUJ bigBed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF045ANQ 10869823 ENCODE Processing Pipeline 3e3999417014e0debab6b57466fbfd3e https://www.encodeproject.org/files/ENCFF033KUJ/@@download/ENCFF033KUJ.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF048GGM bed narrowPeak conservative idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF045ANQ, ENCFF419RSJ, ENCFF646VRU, ENCFF683HWN 158968 ENCODE Processing Pipeline 4f87574a4f9d267b481f00192dbbe314 https://www.encodeproject.org/files/ENCFF048GGM/@@download/ENCFF048GGM.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF498ADM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF048GGM 295941 ENCODE Processing Pipeline 4340df06a054040fd20775cf0b47e72a https://www.encodeproject.org/files/ENCFF498ADM/@@download/ENCFF498ADM.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF491ZOF bigWig fold change over control ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF299IMS, ENCFF948LKH, ENCFF998ZIK 546086310 ENCODE Processing Pipeline c877f84b98d00dcf5e67a3a1f2578c8d https://www.encodeproject.org/files/ENCFF491ZOF/@@download/ENCFF491ZOF.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF045ANQ bed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF299IMS, ENCFF948LKH 4700808 ENCODE Processing Pipeline 9e4569f870f5edc64462e111c2c3be5c https://www.encodeproject.org/files/ENCFF045ANQ/@@download/ENCFF045ANQ.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF683HWN bed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF299IMS, ENCFF948LKH, ENCFF998ZIK 5041191 ENCODE Processing Pipeline 682a42473bf7fa8829a788686485ef34 https://www.encodeproject.org/files/ENCFF683HWN/@@download/ENCFF683HWN.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF772YWJ bigBed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF683HWN 11254380 ENCODE Processing Pipeline c1ae9082d2daf7ef2790e03a691d3f0b https://www.encodeproject.org/files/ENCFF772YWJ/@@download/ENCFF772YWJ.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF834UVX bed narrowPeak optimal idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF045ANQ, ENCFF419RSJ, ENCFF646VRU, ENCFF683HWN 240550 ENCODE Processing Pipeline ae2651345c0138178945300c6923d004 https://www.encodeproject.org/files/ENCFF834UVX/@@download/ENCFF834UVX.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF616RCD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF834UVX 490347 ENCODE Processing Pipeline 84f533fba5b0b6614e83c1fb52e80f33 https://www.encodeproject.org/files/ENCFF616RCD/@@download/ENCFF616RCD.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF197POC bigWig fold change over control ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF060WKJ, ENCFF356DXM 235019599 ENCODE Processing Pipeline 3dd8a5623e3cb33952be9be6e2ebd664 https://www.encodeproject.org/files/ENCFF197POC/@@download/ENCFF197POC.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF471MGU bigWig signal p-value ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF123VAK, ENCFF356DXM 461365945 ENCODE Processing Pipeline 92291f00469be9685f731962bb65d3a6 https://www.encodeproject.org/files/ENCFF471MGU/@@download/ENCFF471MGU.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF887SOZ bigWig fold change over control ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF060WKJ, ENCFF123VAK, ENCFF356DXM 538238528 ENCODE Processing Pipeline 77260c53265aac14515c47dbf2e1a1c1 https://www.encodeproject.org/files/ENCFF887SOZ/@@download/ENCFF887SOZ.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF532VDQ bed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF123VAK, ENCFF356DXM 4740720 ENCODE Processing Pipeline 02e839bde6921f2f70918ae05f02055d https://www.encodeproject.org/files/ENCFF532VDQ/@@download/ENCFF532VDQ.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF247EFL bigBed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF684GVN 11315157 ENCODE Processing Pipeline acd06518531e74d5a7b31db474f5eb34 https://www.encodeproject.org/files/ENCFF247EFL/@@download/ENCFF247EFL.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF843SYD bed narrowPeak optimal idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF380YEP, ENCFF532VDQ, ENCFF684GVN 241631 ENCODE Processing Pipeline c06ac8027f55d91b669cebbc14184c53 https://www.encodeproject.org/files/ENCFF843SYD/@@download/ENCFF843SYD.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF856ZSS bigBed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF380YEP 8123838 ENCODE Processing Pipeline 47033f54078f9ecf8723a0c3944f0687 https://www.encodeproject.org/files/ENCFF856ZSS/@@download/ENCFF856ZSS.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF380YEP bed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF060WKJ, ENCFF356DXM 3832278 ENCODE Processing Pipeline 3c2e59e388ffc27591fefb08cbf09b45 https://www.encodeproject.org/files/ENCFF380YEP/@@download/ENCFF380YEP.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF087TMV bed narrowPeak conservative idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF380YEP, ENCFF532VDQ, ENCFF684GVN 165812 ENCODE Processing Pipeline 14182231fbf58be14c7c2dcf99506cc5 https://www.encodeproject.org/files/ENCFF087TMV/@@download/ENCFF087TMV.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF379HTE bigWig signal p-value ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF060WKJ, ENCFF356DXM 382257741 ENCODE Processing Pipeline 6752ec2df62ef9154cebe8838b430435 https://www.encodeproject.org/files/ENCFF379HTE/@@download/ENCFF379HTE.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF218TTK bigWig signal p-value ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF060WKJ, ENCFF123VAK, ENCFF356DXM 551893434 ENCODE Processing Pipeline c5a191944f349829022aed1d6c2ccddb https://www.encodeproject.org/files/ENCFF218TTK/@@download/ENCFF218TTK.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF992QGS bigWig fold change over control ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF123VAK, ENCFF356DXM 382546676 ENCODE Processing Pipeline d7f7c1db6240684a68c0de544e3c1019 https://www.encodeproject.org/files/ENCFF992QGS/@@download/ENCFF992QGS.bigWig hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF684GVN bed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF060WKJ, ENCFF123VAK, ENCFF356DXM 5098343 ENCODE Processing Pipeline 1acf2c372a047e102ac3485dcecad566 https://www.encodeproject.org/files/ENCFF684GVN/@@download/ENCFF684GVN.bed.gz hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF106GRZ bigBed narrowPeak peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF532VDQ 10916457 ENCODE Processing Pipeline 5841798e5796a51743793415a0a04909 https://www.encodeproject.org/files/ENCFF106GRZ/@@download/ENCFF106GRZ.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF872MGS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF843SYD 488444 ENCODE Processing Pipeline 828a2b46e628d3cc4935247eb9a71d88 https://www.encodeproject.org/files/ENCFF872MGS/@@download/ENCFF872MGS.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF015SPK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKK ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF087TMV 304239 ENCODE Processing Pipeline a455a2f187d8a9d4a96fa4960e30479f https://www.encodeproject.org/files/ENCFF015SPK/@@download/ENCFF015SPK.bigBed hg19 released borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PIO bam alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PJC 1762907343 Richard Myers, HAIB dc042898f2ded867b467881739c5bef8 https://www.encodeproject.org/files/ENCFF000PIO/@@download/ENCFF000PIO.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PIP bigBed broadPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UGA 248969 Richard Myers, HAIB 080c19c8e8604da37fed7d24feb0f3dc https://www.encodeproject.org/files/ENCFF000PIP/@@download/ENCFF000PIP.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PIQ bigBed broadPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UGB 225690 Richard Myers, HAIB 5cf2fddb87460c41a0a41f6634d6a5e0 https://www.encodeproject.org/files/ENCFF000PIQ/@@download/ENCFF000PIQ.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PIR bam alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PJF 2332834381 Richard Myers, HAIB 1b8f1149a1fbcd5fc6476aa95993a27b https://www.encodeproject.org/files/ENCFF000PIR/@@download/ENCFF000PIR.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PIS bigWig raw signal ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 52007953 Richard Myers, HAIB ae2b6a5c89815932e5d79b14710a4b50 https://www.encodeproject.org/files/ENCFF000PIS/@@download/ENCFF000PIS.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PIU bigWig raw signal ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 52083755 Richard Myers, HAIB 9ad81938baa5fcbec09e6a0728d9e499 https://www.encodeproject.org/files/ENCFF000PIU/@@download/ENCFF000PIU.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PJC fastq reads ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 962703658 Richard Myers, HAIB 4c86baa0cb43bd3615e1d2c59729062b https://www.encodeproject.org/files/ENCFF000PJC/@@download/ENCFF000PJC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POQ/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PJF fastq reads ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 2118990141 Richard Myers, HAIB 046bb7fb3ebc2f0c8d5a18cf882b377e https://www.encodeproject.org/files/ENCFF000PJF/@@download/ENCFF000PJF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POO/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001UGA bed broadPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 130986 Richard Myers, HAIB f488c2f0030cd5762a9ba706af598c14 https://www.encodeproject.org/files/ENCFF001UGA/@@download/ENCFF001UGA.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UGB bed broadPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 112610 Richard Myers, HAIB 42f942c387c3dff74c055f2e64739a43 https://www.encodeproject.org/files/ENCFF001UGB/@@download/ENCFF001UGB.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CKL bed narrowPeak optimal idr thresholded peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 208155 ENCODE Consortium Analysis Working Group b71d28c42d7022e7d52efc24a27e5ce7 https://www.encodeproject.org/files/ENCFF002CKL/@@download/ENCFF002CKL.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF042DEE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE ENCFF002CKL 447146 ENCODE Consortium 79d514d318cd9d7d38cd9ded4a2f33e0 https://www.encodeproject.org/files/ENCFF042DEE/@@download/ENCFF042DEE.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF707FTP bam unfiltered alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJC, ENCFF643CGH 1190001470 ENCODE Processing Pipeline ffd91292af962de2471800f24b13f5bc https://www.encodeproject.org/files/ENCFF707FTP/@@download/ENCFF707FTP.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF070WEO bam alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJC, ENCFF643CGH 345537846 ENCODE Processing Pipeline 91415bb98d743d01a7703d6150e020c9 https://www.encodeproject.org/files/ENCFF070WEO/@@download/ENCFF070WEO.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF806BHF bam unfiltered alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJF, ENCFF643CGH 2496312132 ENCODE Processing Pipeline 361d0517e4b881db26469720d9be1746 https://www.encodeproject.org/files/ENCFF806BHF/@@download/ENCFF806BHF.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF496HGU bam alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJF, ENCFF643CGH 597246951 ENCODE Processing Pipeline c1e2a6a98713c7a1defe5794ef4da899 https://www.encodeproject.org/files/ENCFF496HGU/@@download/ENCFF496HGU.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF500QLL bam alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJC, ENCFF807MUK 345759427 ENCODE Processing Pipeline 1f31bdeaed8eef8565be54399b123754 https://www.encodeproject.org/files/ENCFF500QLL/@@download/ENCFF500QLL.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF487QUK bam unfiltered alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJC, ENCFF807MUK 1188352037 ENCODE Processing Pipeline 2383a2286f92da5b4533c79ea1501b9e https://www.encodeproject.org/files/ENCFF487QUK/@@download/ENCFF487QUK.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF446CBW bam unfiltered alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJF, ENCFF807MUK 2493841973 ENCODE Processing Pipeline 68f8acddf9f1203cfd5787f5431d69a6 https://www.encodeproject.org/files/ENCFF446CBW/@@download/ENCFF446CBW.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF802GPW bam alignments ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJF, ENCFF807MUK 597549122 ENCODE Processing Pipeline 2e933005746da9b5994769479eab26a1 https://www.encodeproject.org/files/ENCFF802GPW/@@download/ENCFF802GPW.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF687KKZ bigWig signal p-value ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF070WEO, ENCFF249PQD, ENCFF741TQN 422892433 ENCODE Processing Pipeline bd3a1e09824b763e5e835ae98813a6df https://www.encodeproject.org/files/ENCFF687KKZ/@@download/ENCFF687KKZ.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF269RWR bigWig signal p-value ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF070WEO, ENCFF249PQD, ENCFF496HGU, ENCFF741TQN 665111489 ENCODE Processing Pipeline 1f11badb8f78b494c80c623c92a030b2 https://www.encodeproject.org/files/ENCFF269RWR/@@download/ENCFF269RWR.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF232JOW bigWig signal p-value ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF496HGU, ENCFF741TQN 482123047 ENCODE Processing Pipeline 3764e4631fced3e95a0e25b4f52501f9 https://www.encodeproject.org/files/ENCFF232JOW/@@download/ENCFF232JOW.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF200UZN bigWig fold change over control ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF496HGU, ENCFF741TQN 353833436 ENCODE Processing Pipeline 709e820bd872ce82a1a1cb211eb1b288 https://www.encodeproject.org/files/ENCFF200UZN/@@download/ENCFF200UZN.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF699HQQ bigWig fold change over control ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF070WEO, ENCFF249PQD, ENCFF741TQN 268481363 ENCODE Processing Pipeline 6f20afa78b52b0c66df492b4dfdb95d3 https://www.encodeproject.org/files/ENCFF699HQQ/@@download/ENCFF699HQQ.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF351OIU bigWig fold change over control ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF070WEO, ENCFF249PQD, ENCFF496HGU, ENCFF741TQN 503706192 ENCODE Processing Pipeline 6af8df541b8d828259b5a6fb19d1ed6f https://www.encodeproject.org/files/ENCFF351OIU/@@download/ENCFF351OIU.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF691XJL bigBed narrowPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF305DJN 10798735 ENCODE Processing Pipeline 816c84c75a168f6de92f09b61d610134 https://www.encodeproject.org/files/ENCFF691XJL/@@download/ENCFF691XJL.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF305DJN bed narrowPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249PQD, ENCFF496HGU, ENCFF741TQN 4802730 ENCODE Processing Pipeline 76fcaa4f32e603469f997676d65eb23f https://www.encodeproject.org/files/ENCFF305DJN/@@download/ENCFF305DJN.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF694LYF bed narrowPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF070WEO, ENCFF249PQD, ENCFF741TQN 3950272 ENCODE Processing Pipeline d3e7f7a94108815b8c5bce11eee21979 https://www.encodeproject.org/files/ENCFF694LYF/@@download/ENCFF694LYF.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF059PYR bigBed narrowPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF694LYF 8989522 ENCODE Processing Pipeline 4f6823735a43b368705c59ec1a3a68a5 https://www.encodeproject.org/files/ENCFF059PYR/@@download/ENCFF059PYR.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF883BHO bed narrowPeak conservative idr thresholded peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF305DJN, ENCFF419RSJ, ENCFF694LYF, ENCFF963BWF 135748 ENCODE Processing Pipeline 3ac9a810c64ed11cd39ce1c4442ca1e0 https://www.encodeproject.org/files/ENCFF883BHO/@@download/ENCFF883BHO.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF963BWF bed narrowPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF070WEO, ENCFF249PQD, ENCFF496HGU, ENCFF741TQN 5556149 ENCODE Processing Pipeline 2e9623cd182e0c103e39ea757036003d https://www.encodeproject.org/files/ENCFF963BWF/@@download/ENCFF963BWF.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF030SBW bigBed narrowPeak peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF963BWF 11200043 ENCODE Processing Pipeline a2927c4f84c507525973ef37ea291737 https://www.encodeproject.org/files/ENCFF030SBW/@@download/ENCFF030SBW.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF054HJA bed narrowPeak optimal idr thresholded peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF305DJN, ENCFF419RSJ, ENCFF694LYF, ENCFF963BWF 146066 ENCODE Processing Pipeline fb5ccf666892c59c23ef1b40334b6265 https://www.encodeproject.org/files/ENCFF054HJA/@@download/ENCFF054HJA.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF769JOF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF054HJA 356188 ENCODE Processing Pipeline 92b4bfa6ad4e2f0791778fe052dabc01 https://www.encodeproject.org/files/ENCFF769JOF/@@download/ENCFF769JOF.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF521VPS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF883BHO 338657 ENCODE Processing Pipeline 2fb3222c7ad2bcf680530a3c36674699 https://www.encodeproject.org/files/ENCFF521VPS/@@download/ENCFF521VPS.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF440FTO fastq reads ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 1 50 single-ended 1414179313 Richard Myers, HAIB 28dc15b0c63e3e2c051145e25f8d97ea SRA:SRR5338834 https://www.encodeproject.org/files/ENCFF440FTO/@@download/ENCFF440FTO.fastq.gz HiSeq 2000 /files/ENCFF247MLF/ released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF776IQU fastq reads ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 1 50 single-ended 1549752931 Richard Myers, HAIB ab39cbec07b17dfe92119efc3cf5b0fc SRA:SRR5338833 https://www.encodeproject.org/files/ENCFF776IQU/@@download/ENCFF776IQU.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF150BNL bam alignments ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 50 ENCFF440FTO, ENCFF807MUK 1138084234 ENCODE Processing Pipeline 69d9c8d6ae407fee6baf33385a62f17c https://www.encodeproject.org/files/ENCFF150BNL/@@download/ENCFF150BNL.bam hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF097YMB bam alignments ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 50 ENCFF776IQU, ENCFF807MUK 1225359379 ENCODE Processing Pipeline 20beba0b3546a4929d77b0ade0e58f67 https://www.encodeproject.org/files/ENCFF097YMB/@@download/ENCFF097YMB.bam hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF799SKH bigWig signal p-value ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 ENCFF097YMB, ENCFF321UJV 578529578 ENCODE Processing Pipeline e4b93a8790ca16317a34696afdd26ec4 https://www.encodeproject.org/files/ENCFF799SKH/@@download/ENCFF799SKH.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF258UIX bigWig signal p-value ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 ENCFF150BNL, ENCFF871NUZ 587320709 ENCODE Processing Pipeline f6e8bc0aceb8cbcb122d3985bd58eb52 https://www.encodeproject.org/files/ENCFF258UIX/@@download/ENCFF258UIX.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF883PMP bigWig fold change over control ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 ENCFF097YMB, ENCFF321UJV 666210959 ENCODE Processing Pipeline 61eeea627e198a0d5ee10b20574be5ed https://www.encodeproject.org/files/ENCFF883PMP/@@download/ENCFF883PMP.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF946FAG bigWig signal p-value ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF097YMB, ENCFF150BNL, ENCFF321UJV, ENCFF871NUZ 1036128179 ENCODE Processing Pipeline 5617606c697b243d872ed8e04c8c0034 https://www.encodeproject.org/files/ENCFF946FAG/@@download/ENCFF946FAG.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF345JTW bigWig fold change over control ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 ENCFF150BNL, ENCFF871NUZ 601756822 ENCODE Processing Pipeline b1c1d459add941f0ec0e3fc601e2f47c https://www.encodeproject.org/files/ENCFF345JTW/@@download/ENCFF345JTW.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF386HDH bigWig fold change over control ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF097YMB, ENCFF150BNL, ENCFF321UJV, ENCFF871NUZ 1296991118 ENCODE Processing Pipeline dc6496139edacad02c4577fc1a20e5ac https://www.encodeproject.org/files/ENCFF386HDH/@@download/ENCFF386HDH.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF582WLM bed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 ENCFF097YMB, ENCFF321UJV 6367390 ENCODE Processing Pipeline 5a169b97b1266e69d4c5b7b56e48567a https://www.encodeproject.org/files/ENCFF582WLM/@@download/ENCFF582WLM.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF373SRH bed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 ENCFF150BNL, ENCFF871NUZ 5660379 ENCODE Processing Pipeline 569017cf25d35c0cfea55ceb5e9876cd https://www.encodeproject.org/files/ENCFF373SRH/@@download/ENCFF373SRH.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF080EAQ bed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF097YMB, ENCFF150BNL, ENCFF321UJV, ENCFF871NUZ 7031515 ENCODE Processing Pipeline 0aa626f4f59982649d1dc21a6a41fecd https://www.encodeproject.org/files/ENCFF080EAQ/@@download/ENCFF080EAQ.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF242BYO bigBed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 ENCFF582WLM 13379987 ENCODE Processing Pipeline b667ba900b58df0db46f8600ea5623df https://www.encodeproject.org/files/ENCFF242BYO/@@download/ENCFF242BYO.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF224ZDH bigBed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 ENCFF373SRH 13103054 ENCODE Processing Pipeline 206dfbc14c537b4a763c4f83b508fe21 https://www.encodeproject.org/files/ENCFF224ZDH/@@download/ENCFF224ZDH.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF398GWP bigBed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF080EAQ 13186541 ENCODE Processing Pipeline b482a5f48faad38373faab62d97eeaca https://www.encodeproject.org/files/ENCFF398GWP/@@download/ENCFF398GWP.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF219BOK bam unfiltered alignments ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 50 ENCFF440FTO, ENCFF643CGH 1569013240 ENCODE Processing Pipeline 5220725a9fe419d15616536ea783f6ea https://www.encodeproject.org/files/ENCFF219BOK/@@download/ENCFF219BOK.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF834QOO bam unfiltered alignments ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 50 ENCFF643CGH, ENCFF776IQU 1698916146 ENCODE Processing Pipeline 70e42756f4511a789c7b15021b1e90e0 https://www.encodeproject.org/files/ENCFF834QOO/@@download/ENCFF834QOO.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF080WHB bam alignments ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 50 ENCFF440FTO, ENCFF643CGH 1138076271 ENCODE Processing Pipeline 233a20dcfce5dd414c18fe5046ed685f https://www.encodeproject.org/files/ENCFF080WHB/@@download/ENCFF080WHB.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF528ZOZ bam alignments ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 50 ENCFF643CGH, ENCFF776IQU 1225439452 ENCODE Processing Pipeline cb6f3de7b312ae94f4d037b7035dc681 https://www.encodeproject.org/files/ENCFF528ZOZ/@@download/ENCFF528ZOZ.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF674DZC bigWig signal p-value ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 ENCFF528ZOZ, ENCFF610PNU 689063115 ENCODE Processing Pipeline eaa8534e643d0f45d644e4984cd10cfa https://www.encodeproject.org/files/ENCFF674DZC/@@download/ENCFF674DZC.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF252DME bigWig signal p-value ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 ENCFF080WHB, ENCFF259AXY 617098996 ENCODE Processing Pipeline 4801f2df6a6216fab71c550a05944496 https://www.encodeproject.org/files/ENCFF252DME/@@download/ENCFF252DME.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF275YHW bigWig fold change over control ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 ENCFF528ZOZ, ENCFF610PNU 665547212 ENCODE Processing Pipeline 997a14606ebcb75209a00e075a1dea09 https://www.encodeproject.org/files/ENCFF275YHW/@@download/ENCFF275YHW.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF898LEJ bigWig signal p-value ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF080WHB, ENCFF259AXY, ENCFF528ZOZ, ENCFF610PNU 1076004124 ENCODE Processing Pipeline cdc4009ba786e753037921b0673f6b52 https://www.encodeproject.org/files/ENCFF898LEJ/@@download/ENCFF898LEJ.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF127YRB bigWig fold change over control ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 ENCFF080WHB, ENCFF259AXY 622229262 ENCODE Processing Pipeline b0adb0bd702c929b208d9621703e2130 https://www.encodeproject.org/files/ENCFF127YRB/@@download/ENCFF127YRB.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF245JEE bigWig fold change over control ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF080WHB, ENCFF259AXY, ENCFF528ZOZ, ENCFF610PNU 1281104561 ENCODE Processing Pipeline 7673ed35764cfb24070c8123547a2c70 https://www.encodeproject.org/files/ENCFF245JEE/@@download/ENCFF245JEE.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF430QRQ bed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 ENCFF528ZOZ, ENCFF610PNU 6162854 ENCODE Processing Pipeline a738830d41fc84465c9fdd62c92821f9 https://www.encodeproject.org/files/ENCFF430QRQ/@@download/ENCFF430QRQ.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF326ZRY bed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 ENCFF080WHB, ENCFF259AXY 5512126 ENCODE Processing Pipeline 01dfd8915fa7b96dbecef3a5fd33b766 https://www.encodeproject.org/files/ENCFF326ZRY/@@download/ENCFF326ZRY.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF915VTY bed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF080WHB, ENCFF259AXY, ENCFF528ZOZ, ENCFF610PNU 6941265 ENCODE Processing Pipeline 437712de8b0735804415bcf7caf3a744 https://www.encodeproject.org/files/ENCFF915VTY/@@download/ENCFF915VTY.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF497NYV bigBed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1 ENCFF430QRQ 13417395 ENCODE Processing Pipeline c302168daf351393d14cd1e21c8ebfc8 https://www.encodeproject.org/files/ENCFF497NYV/@@download/ENCFF497NYV.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF957KET bigBed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 2 ENCFF326ZRY 13082238 ENCODE Processing Pipeline 607ecd18c5d172d822bc14283cac7f16 https://www.encodeproject.org/files/ENCFF957KET/@@download/ENCFF957KET.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF851IVF bigBed narrowPeak conservative idr thresholded peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF517PUF 721650 ENCODE Processing Pipeline acd21f9387aa12ed158f3c9f5347ef9a https://www.encodeproject.org/files/ENCFF851IVF/@@download/ENCFF851IVF.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF253CIY bigBed narrowPeak peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF915VTY 13200153 ENCODE Processing Pipeline 085561ff18c393d5960c731ac9060fbc https://www.encodeproject.org/files/ENCFF253CIY/@@download/ENCFF253CIY.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF517PUF bed narrowPeak conservative idr thresholded peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF326ZRY, ENCFF419RSJ, ENCFF430QRQ, ENCFF915VTY 348148 ENCODE Processing Pipeline 592d37569cb49a0b756f5aa35aad511d https://www.encodeproject.org/files/ENCFF517PUF/@@download/ENCFF517PUF.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF707ORF bigBed narrowPeak optimal idr thresholded peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF727ZIT 816339 ENCODE Processing Pipeline e7f2993edd4a58ef1cf7e04e9411e316 https://www.encodeproject.org/files/ENCFF707ORF/@@download/ENCFF707ORF.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF727ZIT bed narrowPeak optimal idr thresholded peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF326ZRY, ENCFF419RSJ, ENCFF430QRQ, ENCFF915VTY 406098 ENCODE Processing Pipeline f41c3b769637018a9a8aff141dbc1b20 https://www.encodeproject.org/files/ENCFF727ZIT/@@download/ENCFF727ZIT.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF668LCR bigBed narrowPeak conservative idr thresholded peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF896PDY 516627 ENCODE Processing Pipeline 639aa9863beffc52ada7418c8a42aec9 https://www.encodeproject.org/files/ENCFF668LCR/@@download/ENCFF668LCR.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF896PDY bed narrowPeak conservative idr thresholded peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF001TDO, ENCFF080EAQ, ENCFF373SRH, ENCFF582WLM 292693 ENCODE Processing Pipeline e1f4dc8fb14de70a97ab688fd6e9cdb9 https://www.encodeproject.org/files/ENCFF896PDY/@@download/ENCFF896PDY.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF688LUP bed narrowPeak optimal idr thresholded peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF001TDO, ENCFF080EAQ, ENCFF373SRH, ENCFF582WLM 345115 ENCODE Processing Pipeline 6261d9022afb9f39ecff325f89aa7120 https://www.encodeproject.org/files/ENCFF688LUP/@@download/ENCFF688LUP.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF195IMH bigBed narrowPeak optimal idr thresholded peaks ENCSR516HUP ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ZBTB33-human ENCAB000AML DNA False 2016-09-19 ENCODE 1, 2 ENCFF688LUP 582402 ENCODE Processing Pipeline 71a3256b0b2a1375f7f6f72edf184fe6 https://www.encodeproject.org/files/ENCFF195IMH/@@download/ENCFF195IMH.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments, biological replicates with identical biosample ENCFF522PUA fastq reads ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 1 50 single-ended 867485222 Richard Myers, HAIB 45ae9e534c1eb3553bdf36d3f4a7d06c SRA:SRR5338830 https://www.encodeproject.org/files/ENCFF522PUA/@@download/ENCFF522PUA.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF094LXX fastq reads ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 1 50 single-ended 1547847483 Richard Myers, HAIB 88b1abb0065767cea875f079baa79a82 SRA:SRR5338829 https://www.encodeproject.org/files/ENCFF094LXX/@@download/ENCFF094LXX.fastq.gz HiSeq 2000 /files/ENCFF247MLF/ released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF978VQG bam alignments ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 50 ENCFF522PUA, ENCFF807MUK 730004538 ENCODE Processing Pipeline 69980d1c52840fafde38f032c74a1a02 https://www.encodeproject.org/files/ENCFF978VQG/@@download/ENCFF978VQG.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF595XJJ bam alignments ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 50 ENCFF094LXX, ENCFF807MUK 1289441081 ENCODE Processing Pipeline 382fc1e1eb4ff8ce287a8b43b394bc8b https://www.encodeproject.org/files/ENCFF595XJJ/@@download/ENCFF595XJJ.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF149YPJ bigWig signal p-value ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF321UJV, ENCFF978VQG 646270929 ENCODE Processing Pipeline 424fb12090a4a79e0ec5db3adc9b5886 https://www.encodeproject.org/files/ENCFF149YPJ/@@download/ENCFF149YPJ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF901EDD bigWig fold change over control ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF321UJV, ENCFF978VQG 479321384 ENCODE Processing Pipeline 5996a40396d4a80d7786cc1b983c296b https://www.encodeproject.org/files/ENCFF901EDD/@@download/ENCFF901EDD.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF771WMO bigWig signal p-value ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF595XJJ, ENCFF871NUZ 802605254 ENCODE Processing Pipeline eb9476141f615428b60cf9a5fad4f6fa https://www.encodeproject.org/files/ENCFF771WMO/@@download/ENCFF771WMO.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF118JDQ bigWig signal p-value ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF321UJV, ENCFF595XJJ, ENCFF871NUZ, ENCFF978VQG 1231429816 ENCODE Processing Pipeline 9af7a840bcd75ea32384ef5fd40d6587 https://www.encodeproject.org/files/ENCFF118JDQ/@@download/ENCFF118JDQ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF677XKQ bigWig fold change over control ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF595XJJ, ENCFF871NUZ 669263224 ENCODE Processing Pipeline d33904a399b73d707a81699606b55341 https://www.encodeproject.org/files/ENCFF677XKQ/@@download/ENCFF677XKQ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF189KUR bed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF321UJV, ENCFF978VQG 5470428 ENCODE Processing Pipeline e9d497a192b45edf404a0686e4045169 https://www.encodeproject.org/files/ENCFF189KUR/@@download/ENCFF189KUR.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF770XDD bed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF321UJV, ENCFF595XJJ, ENCFF871NUZ, ENCFF978VQG 6707063 ENCODE Processing Pipeline 9af239a45a55c248978d3296dd462ca4 https://www.encodeproject.org/files/ENCFF770XDD/@@download/ENCFF770XDD.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF432MFP bigBed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF770XDD 13442328 ENCODE Processing Pipeline 67c5808da1f33ff2754e579d1e0a1685 https://www.encodeproject.org/files/ENCFF432MFP/@@download/ENCFF432MFP.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF850ZSI bigWig fold change over control ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF321UJV, ENCFF595XJJ, ENCFF871NUZ, ENCFF978VQG 1197205552 ENCODE Processing Pipeline 1609496189a22b01ba6828dc4906ced2 https://www.encodeproject.org/files/ENCFF850ZSI/@@download/ENCFF850ZSI.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF788BDL bed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF595XJJ, ENCFF871NUZ 5644585 ENCODE Processing Pipeline 3336128abb2681da891b929d37244e79 https://www.encodeproject.org/files/ENCFF788BDL/@@download/ENCFF788BDL.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF760MDQ bigBed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF189KUR 13378830 ENCODE Processing Pipeline 3184a7e0aedb0ec2159783891372750e https://www.encodeproject.org/files/ENCFF760MDQ/@@download/ENCFF760MDQ.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF222HLE bigBed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF788BDL 13359700 ENCODE Processing Pipeline 363e537823783096dfc4f6ca4b7d0453 https://www.encodeproject.org/files/ENCFF222HLE/@@download/ENCFF222HLE.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF959QIW bam unfiltered alignments ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 50 ENCFF094LXX, ENCFF643CGH 1737111599 ENCODE Processing Pipeline 0ac028594788e753a25dc32b997fa4e8 https://www.encodeproject.org/files/ENCFF959QIW/@@download/ENCFF959QIW.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF302IKM bam unfiltered alignments ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 50 ENCFF522PUA, ENCFF643CGH 964414345 ENCODE Processing Pipeline 1aaf43aad0a7c7c9862fc3a8cf643d88 https://www.encodeproject.org/files/ENCFF302IKM/@@download/ENCFF302IKM.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF150DAE bam alignments ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 50 ENCFF522PUA, ENCFF643CGH 729995498 ENCODE Processing Pipeline 3299719394060a96041806b250aa9b4d https://www.encodeproject.org/files/ENCFF150DAE/@@download/ENCFF150DAE.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF360DAO bam alignments ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 50 ENCFF094LXX, ENCFF643CGH 1289553420 ENCODE Processing Pipeline 1e38e0f623ed5a38a888a96ae2eac312 https://www.encodeproject.org/files/ENCFF360DAO/@@download/ENCFF360DAO.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF209YZY bigWig signal p-value ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF150DAE, ENCFF259AXY, ENCFF360DAO, ENCFF610PNU 1138540672 ENCODE Processing Pipeline 04f10fa7f956c18ffd7e9bc38e09a60b https://www.encodeproject.org/files/ENCFF209YZY/@@download/ENCFF209YZY.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF393XUS bigWig signal p-value ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF150DAE, ENCFF610PNU 514764727 ENCODE Processing Pipeline 91aefd4defac95de1bcbf4cc3c15d746 https://www.encodeproject.org/files/ENCFF393XUS/@@download/ENCFF393XUS.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF993YRE bigWig signal p-value ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF259AXY, ENCFF360DAO 610916070 ENCODE Processing Pipeline cbd90948443be812fd8471a3917d01dc https://www.encodeproject.org/files/ENCFF993YRE/@@download/ENCFF993YRE.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF531YJX bigWig fold change over control ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF150DAE, ENCFF610PNU 482960251 ENCODE Processing Pipeline 92ee6993d53e5a3a352e0658f72304b7 https://www.encodeproject.org/files/ENCFF531YJX/@@download/ENCFF531YJX.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF402NQM bigWig fold change over control ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF259AXY, ENCFF360DAO 672844792 ENCODE Processing Pipeline faba42329d37e52c3f4af453670e19a9 https://www.encodeproject.org/files/ENCFF402NQM/@@download/ENCFF402NQM.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF608OBE bigWig fold change over control ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF150DAE, ENCFF259AXY, ENCFF360DAO, ENCFF610PNU 1208105098 ENCODE Processing Pipeline b5dfcf56dbca45a225a6cd0a55c961da https://www.encodeproject.org/files/ENCFF608OBE/@@download/ENCFF608OBE.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF249KQN bed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF150DAE, ENCFF610PNU 5275365 ENCODE Processing Pipeline 1adf07a63a8ecc85d23a7001fc136cd4 https://www.encodeproject.org/files/ENCFF249KQN/@@download/ENCFF249KQN.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF455JVE bed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF259AXY, ENCFF360DAO 5467145 ENCODE Processing Pipeline 3a8bbad601a9666ac1acc285a5e4cd47 https://www.encodeproject.org/files/ENCFF455JVE/@@download/ENCFF455JVE.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF334TIY bed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF150DAE, ENCFF259AXY, ENCFF360DAO, ENCFF610PNU 6537987 ENCODE Processing Pipeline 334f693f1474f86fbd1f040d18c9ddf8 https://www.encodeproject.org/files/ENCFF334TIY/@@download/ENCFF334TIY.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF865GWU bigBed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1 ENCFF249KQN 13363117 ENCODE Processing Pipeline 1f08de6c89175bf649ddf286ccdd23cd https://www.encodeproject.org/files/ENCFF865GWU/@@download/ENCFF865GWU.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF057IWC bigBed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 2 ENCFF455JVE 11111567 ENCODE Processing Pipeline 4a1386ccb4f7f355276214483fad17c9 https://www.encodeproject.org/files/ENCFF057IWC/@@download/ENCFF057IWC.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF919URJ bed narrowPeak conservative idr thresholded peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF249KQN, ENCFF334TIY, ENCFF419RSJ, ENCFF455JVE 409049 ENCODE Processing Pipeline 091fe38e850ce41f95afd97effa4a94f https://www.encodeproject.org/files/ENCFF919URJ/@@download/ENCFF919URJ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF146QSZ bigBed narrowPeak optimal idr thresholded peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF146URA 965551 ENCODE Processing Pipeline 12619a7434b12345b69e2d3e746477d1 https://www.encodeproject.org/files/ENCFF146QSZ/@@download/ENCFF146QSZ.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF099JHK bigBed narrowPeak peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF334TIY 13456102 ENCODE Processing Pipeline b14c6ee435f54aa981da01135378e69c https://www.encodeproject.org/files/ENCFF099JHK/@@download/ENCFF099JHK.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF146URA bed narrowPeak optimal idr thresholded peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF249KQN, ENCFF334TIY, ENCFF419RSJ, ENCFF455JVE 471024 ENCODE Processing Pipeline 445528050ea8bb170d21d5db7d801ee6 https://www.encodeproject.org/files/ENCFF146URA/@@download/ENCFF146URA.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF631SDS bigBed narrowPeak conservative idr thresholded peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF919URJ 864408 ENCODE Processing Pipeline 5b8023d3106fdbc22b3fdd2e87bda476 https://www.encodeproject.org/files/ENCFF631SDS/@@download/ENCFF631SDS.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF337QJW bed narrowPeak conservative idr thresholded peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF189KUR, ENCFF770XDD, ENCFF788BDL 366040 ENCODE Processing Pipeline 443a559be956fe102fa2d66c50e50c49 https://www.encodeproject.org/files/ENCFF337QJW/@@download/ENCFF337QJW.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF111DET bigBed narrowPeak optimal idr thresholded peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF975PTM 707039 ENCODE Processing Pipeline a7e9d0e5f3fe2687ddd50c7c7cf6d9ca https://www.encodeproject.org/files/ENCFF111DET/@@download/ENCFF111DET.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF439LBF bigBed narrowPeak conservative idr thresholded peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF337QJW 639368 ENCODE Processing Pipeline ed201b4cd092443fea966d06c0db81e9 https://www.encodeproject.org/files/ENCFF439LBF/@@download/ENCFF439LBF.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF975PTM bed narrowPeak optimal idr thresholded peaks ENCSR480LIS ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens ATF3-human ENCAB000ADZ DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF189KUR, ENCFF770XDD, ENCFF788BDL 419388 ENCODE Processing Pipeline a00b36b1c73079054c5df7c5d21b322e https://www.encodeproject.org/files/ENCFF975PTM/@@download/ENCFF975PTM.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, biological replicates with identical biosample ENCFF000PZB bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PZK 867489576 Richard Myers, HAIB 2b523559364b24036fe3674f07b829ee https://www.encodeproject.org/files/ENCFF000PZB/@@download/ENCFF000PZB.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PZC bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PZP 1402173759 Richard Myers, HAIB 5a2f247300b27e0a1b1ac4222fef520a https://www.encodeproject.org/files/ENCFF000PZC/@@download/ENCFF000PZC.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PZD bigBed broadPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJR 915894 Richard Myers, HAIB 500e9848b44742d30d303e50becccf91 https://www.encodeproject.org/files/ENCFF000PZD/@@download/ENCFF000PZD.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PZE bigBed broadPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJS 736178 Richard Myers, HAIB a6b2e4b4b5fcba4d8cc9832597f937b4 https://www.encodeproject.org/files/ENCFF000PZE/@@download/ENCFF000PZE.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PZH bigWig raw signal ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 45907910 Richard Myers, HAIB d82d11631ef53cd12c3f5eacb415b09c https://www.encodeproject.org/files/ENCFF000PZH/@@download/ENCFF000PZH.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000PZI bigWig raw signal ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 39441358 Richard Myers, HAIB 0d3ecd45d914db581faf6d125de473a3 https://www.encodeproject.org/files/ENCFF000PZI/@@download/ENCFF000PZI.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000PZK fastq reads ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 830913112 Richard Myers, HAIB f1f075f13b2f621260ef1a9270242c37 https://www.encodeproject.org/files/ENCFF000PZK/@@download/ENCFF000PZK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000PZP fastq reads ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1344326303 Richard Myers, HAIB 14685a1532e030cd4f14d6d78d7e2e38 https://www.encodeproject.org/files/ENCFF000PZP/@@download/ENCFF000PZP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF001UJR bed broadPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 617800 Richard Myers, HAIB 0598cde9a4ca5b347a48186f3ae321f9 https://www.encodeproject.org/files/ENCFF001UJR/@@download/ENCFF001UJR.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF001UJS bed broadPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 457052 Richard Myers, HAIB 395155e13146ba3c058da7bc53d2a5d5 https://www.encodeproject.org/files/ENCFF001UJS/@@download/ENCFF001UJS.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CLV bed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 754687 ENCODE Consortium Analysis Working Group 703c04df1ee5c8d5245c2751d593b317 https://www.encodeproject.org/files/ENCFF002CLV/@@download/ENCFF002CLV.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF396YCE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE ENCFF002CLV 1848984 ENCODE Consortium 3aa8cad2f2f86b12b661228ccdda2175 https://www.encodeproject.org/files/ENCFF396YCE/@@download/ENCFF396YCE.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF083SFE bam unfiltered alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZK, ENCFF643CGH 1025218179 ENCODE Processing Pipeline f6e236d776affad72daca70a92aec3c1 https://www.encodeproject.org/files/ENCFF083SFE/@@download/ENCFF083SFE.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF645IYJ bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZK, ENCFF643CGH 477698469 ENCODE Processing Pipeline 2ebaef637e9456f1b62b589b7511d4f2 https://www.encodeproject.org/files/ENCFF645IYJ/@@download/ENCFF645IYJ.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF148LZI bam unfiltered alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZP, ENCFF643CGH 1741930687 ENCODE Processing Pipeline e60149a92ea5004e2d0634250b63ffb9 https://www.encodeproject.org/files/ENCFF148LZI/@@download/ENCFF148LZI.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF021CMK bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZP, ENCFF643CGH 1051595007 ENCODE Processing Pipeline 728a9eba80041bc0f4f02ce1f793d9a8 https://www.encodeproject.org/files/ENCFF021CMK/@@download/ENCFF021CMK.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF623RBS bam unfiltered alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZK, ENCFF807MUK 1022970828 ENCODE Processing Pipeline 913bad3ce8d463011d83284cd84c1702 https://www.encodeproject.org/files/ENCFF623RBS/@@download/ENCFF623RBS.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF052PXH bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZK, ENCFF807MUK 477952202 ENCODE Processing Pipeline 2ae770e1ee340a8c935a9aa2a8398147 https://www.encodeproject.org/files/ENCFF052PXH/@@download/ENCFF052PXH.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF526BJV bam unfiltered alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZP, ENCFF807MUK 1738084453 ENCODE Processing Pipeline 02a342ea1a27bf61ae516e9eb16a2a77 https://www.encodeproject.org/files/ENCFF526BJV/@@download/ENCFF526BJV.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF481PJT bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZP, ENCFF807MUK 1052098571 ENCODE Processing Pipeline 03de0b75e84ed721c6cb565bf3289f7d https://www.encodeproject.org/files/ENCFF481PJT/@@download/ENCFF481PJT.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF815LPT bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF021CMK, ENCFF772PJM 349851143 ENCODE Processing Pipeline 37b343d66be9579fd670c3798a08190b https://www.encodeproject.org/files/ENCFF815LPT/@@download/ENCFF815LPT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF526PCX bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF645IYJ, ENCFF772PJM 214266788 ENCODE Processing Pipeline e0cad4d8b0f171bb2b90952104ce4db5 https://www.encodeproject.org/files/ENCFF526PCX/@@download/ENCFF526PCX.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF893YOF bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF021CMK, ENCFF772PJM 199740159 ENCODE Processing Pipeline 9164cb572cc6350b90a4fa86081601ac https://www.encodeproject.org/files/ENCFF893YOF/@@download/ENCFF893YOF.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF642WHJ bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021CMK, ENCFF645IYJ, ENCFF772PJM 185051990 ENCODE Processing Pipeline 690d6c9c2a56bc3eeecdc50a1a3001a7 https://www.encodeproject.org/files/ENCFF642WHJ/@@download/ENCFF642WHJ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF822TXT bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF645IYJ, ENCFF772PJM 185499721 ENCODE Processing Pipeline e49f4b6676bd99ddb6f953f8124db64f https://www.encodeproject.org/files/ENCFF822TXT/@@download/ENCFF822TXT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF422BSY bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021CMK, ENCFF645IYJ, ENCFF772PJM 485067015 ENCODE Processing Pipeline 2caac4dde7db2d6030d0f8daf13a7665 https://www.encodeproject.org/files/ENCFF422BSY/@@download/ENCFF422BSY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF178PTI bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF645IYJ, ENCFF772PJM 4230594 ENCODE Processing Pipeline e7a24eb01ffe31e6234de92ec1547908 https://www.encodeproject.org/files/ENCFF178PTI/@@download/ENCFF178PTI.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF913QDG bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF021CMK, ENCFF772PJM 4401711 ENCODE Processing Pipeline af0a13a9fda72df45edb4fc6dbc385c0 https://www.encodeproject.org/files/ENCFF913QDG/@@download/ENCFF913QDG.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF361DGT bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021CMK, ENCFF645IYJ, ENCFF772PJM 5111608 ENCODE Processing Pipeline 90b8af4e1e46a9f9acf4903cab5f580d https://www.encodeproject.org/files/ENCFF361DGT/@@download/ENCFF361DGT.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF233SHC bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178PTI 9750355 ENCODE Processing Pipeline 9f03650711dfd83eda8f7691ec69afd4 https://www.encodeproject.org/files/ENCFF233SHC/@@download/ENCFF233SHC.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF743KLO bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF913QDG 10216157 ENCODE Processing Pipeline 733a06c866cda9edf54705777437a112 https://www.encodeproject.org/files/ENCFF743KLO/@@download/ENCFF743KLO.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF359NJA bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF361DGT 10785159 ENCODE Processing Pipeline d47c303e381d8fb98cbeff4628ff66b6 https://www.encodeproject.org/files/ENCFF359NJA/@@download/ENCFF359NJA.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF561OGS bed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178PTI, ENCFF361DGT, ENCFF419RSJ, ENCFF913QDG 627927 ENCODE Processing Pipeline b45c5bffe7443eafc8922d733c211f2a https://www.encodeproject.org/files/ENCFF561OGS/@@download/ENCFF561OGS.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF962GIJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF561OGS 1237621 ENCODE Processing Pipeline f623cdfe6303f5bc51f7ad572e39cf07 https://www.encodeproject.org/files/ENCFF962GIJ/@@download/ENCFF962GIJ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF457HUL fastq reads ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1346331043 Richard Myers, HAIB 0e228a9a107908f59f3f12b7405f55a0 SRA:SRR5338729 https://www.encodeproject.org/files/ENCFF457HUL/@@download/ENCFF457HUL.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF249BHU fastq reads ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1248237524 Richard Myers, HAIB f3913832208c86ce3551cf81931fb46d SRA:SRR5338730 https://www.encodeproject.org/files/ENCFF249BHU/@@download/ENCFF249BHU.fastq.gz HiSeq 2000 /files/ENCFF158AFC/ released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF097OZJ bam unfiltered alignments ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 50 ENCFF457HUL, ENCFF643CGH 1517527789 ENCODE Processing Pipeline 763f6a9918a32f4fc37d3cc1d973ce4d https://www.encodeproject.org/files/ENCFF097OZJ/@@download/ENCFF097OZJ.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF455DUC bam alignments ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 50 ENCFF249BHU, ENCFF643CGH 795016172 ENCODE Processing Pipeline 797181d01929bd92ce104c5ae2620101 https://www.encodeproject.org/files/ENCFF455DUC/@@download/ENCFF455DUC.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF272WZR bam unfiltered alignments ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 50 ENCFF249BHU, ENCFF643CGH 1327490856 ENCODE Processing Pipeline 1d94941abd492de2f81e220ff3999dbc https://www.encodeproject.org/files/ENCFF272WZR/@@download/ENCFF272WZR.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF953HVZ bam alignments ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 50 ENCFF457HUL, ENCFF643CGH 1155850085 ENCODE Processing Pipeline 25f0a2236f86d7d53eb71a9088565dba https://www.encodeproject.org/files/ENCFF953HVZ/@@download/ENCFF953HVZ.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF402NBW bigWig signal p-value ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF953HVZ 743704152 ENCODE Processing Pipeline 6100f63d903b84bc43394e37b8ca8e37 https://www.encodeproject.org/files/ENCFF402NBW/@@download/ENCFF402NBW.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF351CUZ bigWig signal p-value ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF455DUC, ENCFF985NSN 524886276 ENCODE Processing Pipeline 0dcb685a8c4353b34d522960a8509ce1 https://www.encodeproject.org/files/ENCFF351CUZ/@@download/ENCFF351CUZ.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF924KSU bigWig fold change over control ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF455DUC, ENCFF985NSN 458331774 ENCODE Processing Pipeline ecd7afa3a2f3fba6f6a20d517aff2bc9 https://www.encodeproject.org/files/ENCFF924KSU/@@download/ENCFF924KSU.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF362XGP bed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF455DUC, ENCFF953HVZ, ENCFF985NSN 6522914 ENCODE Processing Pipeline 160243bb54f1e3186989e6a30797194b https://www.encodeproject.org/files/ENCFF362XGP/@@download/ENCFF362XGP.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF981WKM bigBed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF415VAZ 13286753 ENCODE Processing Pipeline c86fe71f2abeb829877e948f398cc229 https://www.encodeproject.org/files/ENCFF981WKM/@@download/ENCFF981WKM.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF761GCA bigWig signal p-value ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF455DUC, ENCFF953HVZ, ENCFF985NSN 1114557634 ENCODE Processing Pipeline 3399d854415379aeda4281aa74aa1578 https://www.encodeproject.org/files/ENCFF761GCA/@@download/ENCFF761GCA.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF646CBO bigWig fold change over control ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF953HVZ 628353481 ENCODE Processing Pipeline a739d2be30a4fe7c3d0428aaa6802deb https://www.encodeproject.org/files/ENCFF646CBO/@@download/ENCFF646CBO.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF954BOA bigWig fold change over control ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF455DUC, ENCFF953HVZ, ENCFF985NSN 1133841436 ENCODE Processing Pipeline 145766207d8df2ed99128d699773f127 https://www.encodeproject.org/files/ENCFF954BOA/@@download/ENCFF954BOA.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF415VAZ bed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF455DUC, ENCFF985NSN 5124980 ENCODE Processing Pipeline 384123bebd58591533f9072b43fc395a https://www.encodeproject.org/files/ENCFF415VAZ/@@download/ENCFF415VAZ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF614GUV bed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF953HVZ 5488825 ENCODE Processing Pipeline 9cac14957b9c827be6ad6ae7a746660e https://www.encodeproject.org/files/ENCFF614GUV/@@download/ENCFF614GUV.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF887TZG bigBed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF362XGP 13583309 ENCODE Processing Pipeline 9341e7ab46f9689031afc14217609426 https://www.encodeproject.org/files/ENCFF887TZG/@@download/ENCFF887TZG.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF162LWQ bigBed narrowPeak optimal idr thresholded peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF951VPZ 628082 ENCODE Processing Pipeline 1f83ffafa44a7a609e79408f5977f7b6 https://www.encodeproject.org/files/ENCFF162LWQ/@@download/ENCFF162LWQ.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF834YZA bigBed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF614GUV 11369230 ENCODE Processing Pipeline f6f2d0bd0e15ed74536352d40fb5c186 https://www.encodeproject.org/files/ENCFF834YZA/@@download/ENCFF834YZA.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF823LVL bed narrowPeak conservative idr thresholded peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF362XGP, ENCFF415VAZ, ENCFF419RSJ, ENCFF614GUV 243081 ENCODE Processing Pipeline 678e818496568b28f934672f62793095 https://www.encodeproject.org/files/ENCFF823LVL/@@download/ENCFF823LVL.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF951VPZ bed narrowPeak optimal idr thresholded peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF362XGP, ENCFF415VAZ, ENCFF419RSJ, ENCFF614GUV 337429 ENCODE Processing Pipeline ddb80b0e8596d0ecb3d6aca81627e02b https://www.encodeproject.org/files/ENCFF951VPZ/@@download/ENCFF951VPZ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF902SPB bigBed narrowPeak conservative idr thresholded peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF823LVL 496341 ENCODE Processing Pipeline fcea366537693625bd7220bf97f251e7 https://www.encodeproject.org/files/ENCFF902SPB/@@download/ENCFF902SPB.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF293WLB bam alignments ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 50 ENCFF249BHU, ENCFF807MUK 795112595 ENCODE Processing Pipeline f0c2d60236bbeebf4b121de7a0ef22a9 https://www.encodeproject.org/files/ENCFF293WLB/@@download/ENCFF293WLB.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF061HRD bam unfiltered alignments ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 50 ENCFF249BHU, ENCFF807MUK 1322117526 ENCODE Processing Pipeline 50f18af3080906488f33046914e9bd02 https://www.encodeproject.org/files/ENCFF061HRD/@@download/ENCFF061HRD.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF800SIC bam unfiltered alignments ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 50 ENCFF457HUL, ENCFF807MUK 1509059088 ENCODE Processing Pipeline 26e923db77cfd3f707af423ff48fc469 https://www.encodeproject.org/files/ENCFF800SIC/@@download/ENCFF800SIC.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF811PZE bam alignments ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 50 ENCFF457HUL, ENCFF807MUK 1155624680 ENCODE Processing Pipeline 06aa4dda70009b6b4efcbf492724b5d3 https://www.encodeproject.org/files/ENCFF811PZE/@@download/ENCFF811PZE.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF972ILN bed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF293WLB, ENCFF359TIO 5187445 ENCODE Processing Pipeline 57a4c44881b7a7f7237879868d6fcf42 https://www.encodeproject.org/files/ENCFF972ILN/@@download/ENCFF972ILN.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF107UWE bigBed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF971SJB 13581261 ENCODE Processing Pipeline 98a49d88f6b008d9b8a8e47d58fa0aa2 https://www.encodeproject.org/files/ENCFF107UWE/@@download/ENCFF107UWE.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF584JHM bed narrowPeak conservative idr thresholded peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF363RKC, ENCFF971SJB, ENCFF972ILN 241250 ENCODE Processing Pipeline a7bd3a361a63bf5cce1902e30ebbd5cc https://www.encodeproject.org/files/ENCFF584JHM/@@download/ENCFF584JHM.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF126PNX bed narrowPeak optimal idr thresholded peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF363RKC, ENCFF971SJB, ENCFF972ILN 336869 ENCODE Processing Pipeline 6d717898050610295a501877bd125954 https://www.encodeproject.org/files/ENCFF126PNX/@@download/ENCFF126PNX.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF279NUK bigWig signal p-value ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF811PZE, ENCFF991UTU 748513159 ENCODE Processing Pipeline 699d9812310becc8d8dba73c9709d292 https://www.encodeproject.org/files/ENCFF279NUK/@@download/ENCFF279NUK.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF736CDW bigWig fold change over control ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF293WLB, ENCFF359TIO 457361807 ENCODE Processing Pipeline 6501363afa891e6fc4edf4daff5056ef https://www.encodeproject.org/files/ENCFF736CDW/@@download/ENCFF736CDW.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF971SJB bed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF811PZE, ENCFF991UTU 5575230 ENCODE Processing Pipeline dfe5f474cdaa145a30751de61781cda3 https://www.encodeproject.org/files/ENCFF971SJB/@@download/ENCFF971SJB.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF267EQX bigBed narrowPeak conservative idr thresholded peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF584JHM 493466 ENCODE Processing Pipeline c76267c220f8c38ee31adbe156006365 https://www.encodeproject.org/files/ENCFF267EQX/@@download/ENCFF267EQX.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF934VUD bigBed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF363RKC 13570252 ENCODE Processing Pipeline fc173dbc06c1aab468c14a7ba5eb0594 https://www.encodeproject.org/files/ENCFF934VUD/@@download/ENCFF934VUD.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF249WXY bigWig signal p-value ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF293WLB, ENCFF359TIO 527572515 ENCODE Processing Pipeline 872fc83654d7d04eb1f9d46a771da815 https://www.encodeproject.org/files/ENCFF249WXY/@@download/ENCFF249WXY.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF083IOI bigWig signal p-value ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF293WLB, ENCFF359TIO, ENCFF811PZE, ENCFF991UTU 944866184 ENCODE Processing Pipeline 4333457e3317ed9405e0e21d07bae94a https://www.encodeproject.org/files/ENCFF083IOI/@@download/ENCFF083IOI.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF029DJG bigWig fold change over control ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1 ENCFF811PZE, ENCFF991UTU 632167004 ENCODE Processing Pipeline 6ffa810e1b327f8050f1df4b2554b0ca https://www.encodeproject.org/files/ENCFF029DJG/@@download/ENCFF029DJG.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF382ULT bigWig fold change over control ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF293WLB, ENCFF359TIO, ENCFF811PZE, ENCFF991UTU 1179288906 ENCODE Processing Pipeline fa877a4b49b307abf8b1b20268b2fa7e https://www.encodeproject.org/files/ENCFF382ULT/@@download/ENCFF382ULT.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF363RKC bed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF293WLB, ENCFF359TIO, ENCFF811PZE, ENCFF991UTU 6553595 ENCODE Processing Pipeline c299ee0af7a4e92a2dd1635039dc61c8 https://www.encodeproject.org/files/ENCFF363RKC/@@download/ENCFF363RKC.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF891RRU bigBed narrowPeak peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 2 ENCFF972ILN 13286386 ENCODE Processing Pipeline da7481d3bc86a15e954996a1979c5a00 https://www.encodeproject.org/files/ENCFF891RRU/@@download/ENCFF891RRU.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF401BVO bigBed narrowPeak optimal idr thresholded peaks ENCSR324RCI ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA1-human ENCAB000AGN DNA False 2016-06-30 ENCODE 1, 2 ENCFF126PNX 626717 ENCODE Processing Pipeline b9debdc341685f0889869de45ba1ff26 https://www.encodeproject.org/files/ENCFF401BVO/@@download/ENCFF401BVO.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QQZ bam alignments ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000QRL 1197428809 Richard Myers, HAIB 3d245cdc993beb3f28c6005b8704af84 https://www.encodeproject.org/files/ENCFF000QQZ/@@download/ENCFF000QQZ.bam hg19 archived low read depth ENCFF000QRA bigBed broadPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UNT 137647 Richard Myers, HAIB b48dd838bacecad11595f8b6d3178c92 https://www.encodeproject.org/files/ENCFF000QRA/@@download/ENCFF000QRA.bigBed hg19 archived low read depth ENCFF000QRB bigBed broadPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UNU 122719 Richard Myers, HAIB a86f84b7a4a6ca88212ccf3ff18c2a77 https://www.encodeproject.org/files/ENCFF000QRB/@@download/ENCFF000QRB.bigBed hg19 archived low read depth ENCFF000QRC bam alignments ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QRS 2694772860 Richard Myers, HAIB 2f80e1651a39a8435e21f8b76f89e1ef https://www.encodeproject.org/files/ENCFF000QRC/@@download/ENCFF000QRC.bam hg19 archived low read depth ENCFF000QRD bigWig raw signal ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 1 314778277 Richard Myers, HAIB 705b2d5ba0773b1da1f040ee2083dc4b https://www.encodeproject.org/files/ENCFF000QRD/@@download/ENCFF000QRD.bigWig hg19 archived low read depth missing derived_from ENCFF000QRF bigWig raw signal ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 1 121251844 Richard Myers, HAIB fef24a4c3256ffbfba03019605999c89 https://www.encodeproject.org/files/ENCFF000QRF/@@download/ENCFF000QRF.bigWig hg19 archived low read depth missing derived_from ENCFF000QRL fastq reads ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1234736470 Richard Myers, HAIB 5cfc60c6eec28600f6378f9461f68260 https://www.encodeproject.org/files/ENCFF000QRL/@@download/ENCFF000QRL.fastq.gz HiSeq 2000 /files/ENCFF000QQJ/ released low read depth ENCFF000QRS fastq reads ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 2789727339 Richard Myers, HAIB faffd996a54308b490ca86ab45e05f17 https://www.encodeproject.org/files/ENCFF000QRS/@@download/ENCFF000QRS.fastq.gz HiSeq 2000 /files/ENCFF000QQG/ released low read depth ENCFF001UNT bed broadPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 1 56581 Richard Myers, HAIB e4ba640f1f554a3ea7d524fc8e1aa13c https://www.encodeproject.org/files/ENCFF001UNT/@@download/ENCFF001UNT.bed.gz hg19 archived low read depth missing derived_from ENCFF001UNU bed broadPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 1 42141 Richard Myers, HAIB add7ac05c7313b5955507385e926b5e8 https://www.encodeproject.org/files/ENCFF001UNU/@@download/ENCFF001UNU.bed.gz hg19 archived low read depth missing derived_from ENCFF735UKW bam unfiltered alignments ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000QRL, ENCFF643CGH 1285164311 ENCODE Processing Pipeline 621837ab62d6b3e49da81a265b95281c https://www.encodeproject.org/files/ENCFF735UKW/@@download/ENCFF735UKW.bam GRCh38 released low read depth ENCFF724MQA bam unfiltered alignments ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QRS, ENCFF643CGH 2900301753 ENCODE Processing Pipeline 5e842d948d33460ea09b5d586af72af7 https://www.encodeproject.org/files/ENCFF724MQA/@@download/ENCFF724MQA.bam GRCh38 released low read depth ENCFF221KOJ bam alignments ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QRL, ENCFF643CGH 872503048 ENCODE Processing Pipeline 39817e348af0e6d8c585bc5e1a3c9bdc https://www.encodeproject.org/files/ENCFF221KOJ/@@download/ENCFF221KOJ.bam GRCh38 released low read depth ENCFF430REQ bam alignments ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QRS, ENCFF643CGH 2061766635 ENCODE Processing Pipeline c6680403c5b4acd8c5345029be504acf https://www.encodeproject.org/files/ENCFF430REQ/@@download/ENCFF430REQ.bam GRCh38 released low read depth ENCFF831FHP bigWig fold change over control ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF139XSQ, ENCFF221KOJ, ENCFF430REQ, ENCFF511JFV 1006905029 ENCODE Processing Pipeline 347e763062f8079d8501b32647ba66f4 https://www.encodeproject.org/files/ENCFF831FHP/@@download/ENCFF831FHP.bigWig GRCh38 released low read depth ENCFF555PAT bigBed narrowPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 ENCFF085IWO 10710290 ENCODE Processing Pipeline 2bc37d3851e841f64a6e8d9f3eb0ed8d https://www.encodeproject.org/files/ENCFF555PAT/@@download/ENCFF555PAT.bigBed GRCh38 released low read depth ENCFF862NQS bigWig fold change over control ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 ENCFF139XSQ, ENCFF221KOJ 347372247 ENCODE Processing Pipeline 64003ae74d78beebae3e5f203742ca13 https://www.encodeproject.org/files/ENCFF862NQS/@@download/ENCFF862NQS.bigWig GRCh38 released low read depth ENCFF442LPJ bed narrowPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 ENCFF139XSQ, ENCFF430REQ, ENCFF511JFV 6074482 ENCODE Processing Pipeline c70227543e3729df853d280a11dcba46 https://www.encodeproject.org/files/ENCFF442LPJ/@@download/ENCFF442LPJ.bed.gz GRCh38 released low read depth ENCFF193JUV bigBed narrowPeak conservative idr thresholded peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF723ODO 298785 ENCODE Processing Pipeline 8bdca699832e9e6f63f315b0a7205465 https://www.encodeproject.org/files/ENCFF193JUV/@@download/ENCFF193JUV.bigBed GRCh38 released low read depth ENCFF762MGC bed narrowPeak optimal idr thresholded peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF085IWO, ENCFF419RSJ, ENCFF442LPJ, ENCFF942TUT 153046 ENCODE Processing Pipeline 5dbdc772b74deb533265ebf1c6cff53f https://www.encodeproject.org/files/ENCFF762MGC/@@download/ENCFF762MGC.bed.gz GRCh38 released low read depth ENCFF329ZVV bigWig signal p-value ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 ENCFF139XSQ, ENCFF430REQ, ENCFF511JFV 878962923 ENCODE Processing Pipeline 86affe89e9da7cc3c547bb9b30851cc3 https://www.encodeproject.org/files/ENCFF329ZVV/@@download/ENCFF329ZVV.bigWig GRCh38 released low read depth ENCFF108JMX bigWig signal p-value ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 ENCFF139XSQ, ENCFF221KOJ 435654354 ENCODE Processing Pipeline d88b1f8102074d1dfb1d20df9de3bdf7 https://www.encodeproject.org/files/ENCFF108JMX/@@download/ENCFF108JMX.bigWig GRCh38 released low read depth ENCFF869MYC bigWig signal p-value ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF139XSQ, ENCFF221KOJ, ENCFF430REQ, ENCFF511JFV 985959485 ENCODE Processing Pipeline 896977186553c89ef4e6f0edee14949b https://www.encodeproject.org/files/ENCFF869MYC/@@download/ENCFF869MYC.bigWig GRCh38 released low read depth ENCFF079PQB bigWig fold change over control ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 ENCFF139XSQ, ENCFF430REQ, ENCFF511JFV 793415121 ENCODE Processing Pipeline fe7e710960dc344dfa840178cd30d198 https://www.encodeproject.org/files/ENCFF079PQB/@@download/ENCFF079PQB.bigWig GRCh38 released low read depth ENCFF085IWO bed narrowPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 2 ENCFF139XSQ, ENCFF221KOJ 4752330 ENCODE Processing Pipeline 09b9b0385f94a58c4e4f1a1cbc8f3ab2 https://www.encodeproject.org/files/ENCFF085IWO/@@download/ENCFF085IWO.bed.gz GRCh38 released low read depth ENCFF127MLU bigBed narrowPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1 ENCFF442LPJ 13539682 ENCODE Processing Pipeline 692b1a48596411936b8c92711350fb90 https://www.encodeproject.org/files/ENCFF127MLU/@@download/ENCFF127MLU.bigBed GRCh38 released low read depth ENCFF942TUT bed narrowPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF139XSQ, ENCFF221KOJ, ENCFF430REQ, ENCFF511JFV 6389576 ENCODE Processing Pipeline ce9c68977b1f13c823939e25be656edf https://www.encodeproject.org/files/ENCFF942TUT/@@download/ENCFF942TUT.bed.gz GRCh38 released low read depth ENCFF749JDO bigBed narrowPeak optimal idr thresholded peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF762MGC 382184 ENCODE Processing Pipeline 07b636d0020702dd29d65013f5ca0633 https://www.encodeproject.org/files/ENCFF749JDO/@@download/ENCFF749JDO.bigBed GRCh38 released low read depth ENCFF723ODO bed narrowPeak conservative idr thresholded peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF085IWO, ENCFF419RSJ, ENCFF442LPJ, ENCFF942TUT 138712 ENCODE Processing Pipeline aac3d344271af60352fd9bf6ac53f172 https://www.encodeproject.org/files/ENCFF723ODO/@@download/ENCFF723ODO.bed.gz GRCh38 released low read depth ENCFF469MOR bigBed narrowPeak peaks ENCSR000AHF ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF942TUT 13419934 ENCODE Processing Pipeline ecb3e63179fcac4d113f549dea43bfe8 https://www.encodeproject.org/files/ENCFF469MOR/@@download/ENCFF469MOR.bigBed GRCh38 released low read depth ENCFF000QSV bam alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QTC 385279756 Richard Myers, HAIB 71c96c5ae81d93c8559eb6f33f188d4e https://www.encodeproject.org/files/ENCFF000QSV/@@download/ENCFF000QSV.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QSW bigBed broadPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UOF 937475 Richard Myers, HAIB 0b19305466bc1cb8f910ff67854915a8 https://www.encodeproject.org/files/ENCFF000QSW/@@download/ENCFF000QSW.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QSX bigBed broadPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UOG 772910 Richard Myers, HAIB 50d31784e12adbe450c6d52a1ae8811e https://www.encodeproject.org/files/ENCFF000QSX/@@download/ENCFF000QSX.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QSY bam alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QTI 1288578934 Richard Myers, HAIB 24fe9bf355ed531d4d8b72e3afc0c4d9 https://www.encodeproject.org/files/ENCFF000QSY/@@download/ENCFF000QSY.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QSZ bigWig raw signal ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 32873774 Richard Myers, HAIB c0ad199cbeeeb4f4f360f38190f8efe0 https://www.encodeproject.org/files/ENCFF000QSZ/@@download/ENCFF000QSZ.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000QTB bigWig raw signal ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 63711463 Richard Myers, HAIB 488641dbc0be4dcf855e4609a6685f4c https://www.encodeproject.org/files/ENCFF000QTB/@@download/ENCFF000QTB.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000QTC fastq reads ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 699817217 Richard Myers, HAIB 6ec14909fecdc6ee24def7f3bbdadccb https://www.encodeproject.org/files/ENCFF000QTC/@@download/ENCFF000QTC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QTV/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QTI fastq reads ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1661248447 Richard Myers, HAIB d51e99a07146302fff1098d2ee3ae067 https://www.encodeproject.org/files/ENCFF000QTI/@@download/ENCFF000QTI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QTV/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UOF bed broadPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 452059 Richard Myers, HAIB c0431d923b150e2ca50ab3cb801dd4e1 https://www.encodeproject.org/files/ENCFF001UOF/@@download/ENCFF001UOF.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UOG bed broadPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 451811 Richard Myers, HAIB a1dfadb0ce9fe74fd8de063903873051 https://www.encodeproject.org/files/ENCFF001UOG/@@download/ENCFF001UOG.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CNB bed narrowPeak optimal idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 250789 ENCODE Consortium Analysis Working Group ad00d66bbffee15754ff260bf663a073 https://www.encodeproject.org/files/ENCFF002CNB/@@download/ENCFF002CNB.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF129QRS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE ENCFF002CNB 685542 ENCODE Consortium f4f2ae8418825c2df89c983990d5434d https://www.encodeproject.org/files/ENCFF129QRS/@@download/ENCFF129QRS.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF630ZLF bam alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QTC, ENCFF643CGH 565733029 ENCODE Processing Pipeline 12114d7aefabda233a0269dadd313795 https://www.encodeproject.org/files/ENCFF630ZLF/@@download/ENCFF630ZLF.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF365AWP bam unfiltered alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QTC, ENCFF643CGH 917413382 ENCODE Processing Pipeline 64ca07b098761ec81f36bd7ac296120f https://www.encodeproject.org/files/ENCFF365AWP/@@download/ENCFF365AWP.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF993CNT bam unfiltered alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QTI, ENCFF643CGH 1734388026 ENCODE Processing Pipeline ef4a8cec1a9ffcc8368031ef7321993c https://www.encodeproject.org/files/ENCFF993CNT/@@download/ENCFF993CNT.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF635PGS bam alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QTI, ENCFF643CGH 873498891 ENCODE Processing Pipeline d9fd91833978cdabf72a0784c9df874c https://www.encodeproject.org/files/ENCFF635PGS/@@download/ENCFF635PGS.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF699EDD bam unfiltered alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QTC, ENCFF807MUK 916025665 ENCODE Processing Pipeline c2394c7d2dfa8d6b2fd6c146981af2af https://www.encodeproject.org/files/ENCFF699EDD/@@download/ENCFF699EDD.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF065NPZ bam alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QTC, ENCFF807MUK 565866240 ENCODE Processing Pipeline dd338977077c3af667bf1df754acdb04 https://www.encodeproject.org/files/ENCFF065NPZ/@@download/ENCFF065NPZ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF036FEW bam unfiltered alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QTI, ENCFF807MUK 1729537169 ENCODE Processing Pipeline 3ddb7b7421f1b5d10ebfdc753004afc1 https://www.encodeproject.org/files/ENCFF036FEW/@@download/ENCFF036FEW.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF533ZHL bam alignments ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QTI, ENCFF807MUK 873823958 ENCODE Processing Pipeline 68aea9298aa833cf19675dec1c1e8594 https://www.encodeproject.org/files/ENCFF533ZHL/@@download/ENCFF533ZHL.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF739ESG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF003OCH 1074639 ENCODE Processing Pipeline d6918c1cf13dca5a8ab96da79f3a6d0c https://www.encodeproject.org/files/ENCFF739ESG/@@download/ENCFF739ESG.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF897SRB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF426UBL 970810 ENCODE Processing Pipeline 97460b138365be1e68af4324341f6640 https://www.encodeproject.org/files/ENCFF897SRB/@@download/ENCFF897SRB.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF541ZKH bigWig signal p-value ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF317CKP, ENCFF630ZLF 389656635 ENCODE Processing Pipeline 0b1f7da9e828015ae1bd0ae87a684068 https://www.encodeproject.org/files/ENCFF541ZKH/@@download/ENCFF541ZKH.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF667CGC bigWig fold change over control ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF317CKP, ENCFF635PGS 383033364 ENCODE Processing Pipeline 7d98eaa896d398cd6ae53d6d901b8007 https://www.encodeproject.org/files/ENCFF667CGC/@@download/ENCFF667CGC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF133KSG bed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF317CKP, ENCFF630ZLF, ENCFF635PGS 6994662 ENCODE Processing Pipeline b0501cf7573bdfad40ccf6819f53c3de https://www.encodeproject.org/files/ENCFF133KSG/@@download/ENCFF133KSG.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF719XGC bigBed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF085FIN 12371330 ENCODE Processing Pipeline b6e0d5f2eabbae82fcbfab8cbe526938 https://www.encodeproject.org/files/ENCFF719XGC/@@download/ENCFF719XGC.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF003OCH bed narrowPeak optimal idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF085FIN, ENCFF133KSG, ENCFF419RSJ, ENCFF884OWM 461198 ENCODE Processing Pipeline 6bebb3f1bfedef1317c5fe913472b664 https://www.encodeproject.org/files/ENCFF003OCH/@@download/ENCFF003OCH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF701OMN bigWig signal p-value ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF317CKP, ENCFF630ZLF, ENCFF635PGS 488726839 ENCODE Processing Pipeline c255c71c2348568219266fb8770754e6 https://www.encodeproject.org/files/ENCFF701OMN/@@download/ENCFF701OMN.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF426UBL bed narrowPeak conservative idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF085FIN, ENCFF133KSG, ENCFF419RSJ, ENCFF884OWM 401848 ENCODE Processing Pipeline b2d5083a893081d2bafa33817fc76700 https://www.encodeproject.org/files/ENCFF426UBL/@@download/ENCFF426UBL.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF567DPU bigWig fold change over control ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF317CKP, ENCFF630ZLF, ENCFF635PGS 556726943 ENCODE Processing Pipeline 7ff667689411230ff847157d36b31a7a https://www.encodeproject.org/files/ENCFF567DPU/@@download/ENCFF567DPU.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF884OWM bed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF317CKP, ENCFF630ZLF 6786690 ENCODE Processing Pipeline 125ad13c8ba2d1c63d7546dbcc4f12d1 https://www.encodeproject.org/files/ENCFF884OWM/@@download/ENCFF884OWM.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF676LIU bigWig fold change over control ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF317CKP, ENCFF630ZLF 278791138 ENCODE Processing Pipeline 97f4597bd0b577ef324b0a6d09b007b5 https://www.encodeproject.org/files/ENCFF676LIU/@@download/ENCFF676LIU.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF126CPK bigWig signal p-value ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF317CKP, ENCFF635PGS 411991272 ENCODE Processing Pipeline 10be4411c27dc55aa80419c28139fa9a https://www.encodeproject.org/files/ENCFF126CPK/@@download/ENCFF126CPK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF085FIN bed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF317CKP, ENCFF635PGS 6442110 ENCODE Processing Pipeline 82ce2de446bccf3ea766feefb8eb1e5a https://www.encodeproject.org/files/ENCFF085FIN/@@download/ENCFF085FIN.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF912QJF bigBed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF884OWM 11735408 ENCODE Processing Pipeline fcc493242357ad3410d250273dd89e5d https://www.encodeproject.org/files/ENCFF912QJF/@@download/ENCFF912QJF.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF099CNW bigBed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF133KSG 11965082 ENCODE Processing Pipeline 9aeef13d167cb185d098bbff3feee64b https://www.encodeproject.org/files/ENCFF099CNW/@@download/ENCFF099CNW.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF723FQX bigWig fold change over control ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF065NPZ, ENCFF269DQZ 274733276 ENCODE Processing Pipeline b2d6cc354e216b8a77b2a073a164fd42 https://www.encodeproject.org/files/ENCFF723FQX/@@download/ENCFF723FQX.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF664OBH bed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF269DQZ, ENCFF533ZHL 6449095 ENCODE Processing Pipeline be953678ce5d4619b2db06ef1201f885 https://www.encodeproject.org/files/ENCFF664OBH/@@download/ENCFF664OBH.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF054JLK bigBed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF362UBD 11451568 ENCODE Processing Pipeline a248da316e596a2218aa0171cac32064 https://www.encodeproject.org/files/ENCFF054JLK/@@download/ENCFF054JLK.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF039FSY bigWig signal p-value ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF065NPZ, ENCFF269DQZ, ENCFF533ZHL 485069944 ENCODE Processing Pipeline 0e41949f74c407392868f12a07e0e89d https://www.encodeproject.org/files/ENCFF039FSY/@@download/ENCFF039FSY.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF155ALO bigWig fold change over control ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF269DQZ, ENCFF533ZHL 388843762 ENCODE Processing Pipeline d47fe7238fddb814bd0b506be4756710 https://www.encodeproject.org/files/ENCFF155ALO/@@download/ENCFF155ALO.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF032OMT bigBed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF706ZMD 11964873 ENCODE Processing Pipeline 47660be334e291b070c6299dd8e508b8 https://www.encodeproject.org/files/ENCFF032OMT/@@download/ENCFF032OMT.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF390WDR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF484UIX 969400 ENCODE Processing Pipeline a20e3217a30ae1abe9e26a31835ef039 https://www.encodeproject.org/files/ENCFF390WDR/@@download/ENCFF390WDR.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF043IXU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF686GFT 1083056 ENCODE Processing Pipeline fc8a83a40030a75ec7f8a7c4ac2f7f58 https://www.encodeproject.org/files/ENCFF043IXU/@@download/ENCFF043IXU.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF438WWM bigWig signal p-value ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF065NPZ, ENCFF269DQZ 413577151 ENCODE Processing Pipeline a44373bd4ec28027368a9279039da1d4 https://www.encodeproject.org/files/ENCFF438WWM/@@download/ENCFF438WWM.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF211NKC bigBed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF664OBH 12376856 ENCODE Processing Pipeline 7103ccb5a741acf536225b75da16e108 https://www.encodeproject.org/files/ENCFF211NKC/@@download/ENCFF211NKC.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF086BCA bigWig signal p-value ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF269DQZ, ENCFF533ZHL 419053523 ENCODE Processing Pipeline 2bcde36f4789ac6d50dd5eb2e097004b https://www.encodeproject.org/files/ENCFF086BCA/@@download/ENCFF086BCA.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF859DJI bigWig fold change over control ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF065NPZ, ENCFF269DQZ, ENCFF533ZHL 548713826 ENCODE Processing Pipeline 389da719911f73402cedb0a6a6814a68 https://www.encodeproject.org/files/ENCFF859DJI/@@download/ENCFF859DJI.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF362UBD bed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF065NPZ, ENCFF269DQZ 6553858 ENCODE Processing Pipeline 25a6f2b04ea8bef474f09832a310977c https://www.encodeproject.org/files/ENCFF362UBD/@@download/ENCFF362UBD.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF706ZMD bed narrowPeak peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF065NPZ, ENCFF269DQZ, ENCFF533ZHL 6995236 ENCODE Processing Pipeline 68bd35648dbbfeb4a54e31c1cba8e264 https://www.encodeproject.org/files/ENCFF706ZMD/@@download/ENCFF706ZMD.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF484UIX bed narrowPeak conservative idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF362UBD, ENCFF664OBH, ENCFF706ZMD 401420 ENCODE Processing Pipeline 72d09c8f86c22cb82e543d3363fe97c8 https://www.encodeproject.org/files/ENCFF484UIX/@@download/ENCFF484UIX.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF686GFT bed narrowPeak optimal idr thresholded peaks ENCSR000BOV ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF362UBD, ENCFF664OBH, ENCFF706ZMD 467634 ENCODE Processing Pipeline ca32ff65d16feff62a5b3eae56a6512f https://www.encodeproject.org/files/ENCFF686GFT/@@download/ENCFF686GFT.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PFM bam alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PFY 473481542 Richard Myers, HAIB 7593eb016241682aa3f52be21adadcd0 https://www.encodeproject.org/files/ENCFF000PFM/@@download/ENCFF000PFM.bam hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PFN bigBed broadPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFG 253029 Richard Myers, HAIB f70d02cb0c634cd8500cb74c4b25d5d5 https://www.encodeproject.org/files/ENCFF000PFN/@@download/ENCFF000PFN.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PFO bigBed broadPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFH 84303 Richard Myers, HAIB 4a2648b4ef24d23b9266a03b87896ca3 https://www.encodeproject.org/files/ENCFF000PFO/@@download/ENCFF000PFO.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PFP bam alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PGB 979312275 Richard Myers, HAIB ecb86e45d6194a6720642f5ee7939971 https://www.encodeproject.org/files/ENCFF000PFP/@@download/ENCFF000PFP.bam hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PFS bigWig raw signal ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 1 28372738 Richard Myers, HAIB ab6349da1c7e697c5b83140dd3fea17c https://www.encodeproject.org/files/ENCFF000PFS/@@download/ENCFF000PFS.bigWig hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PFT bigWig raw signal ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 1 5520116 Richard Myers, HAIB a904f25ccf50a12d2c26561d8adec7ad https://www.encodeproject.org/files/ENCFF000PFT/@@download/ENCFF000PFT.bigWig hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PFY fastq reads ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 805807294 Richard Myers, HAIB a25d3342d27cacdf2b1744ac2fc96428 https://www.encodeproject.org/files/ENCFF000PFY/@@download/ENCFF000PFY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000PGB fastq reads ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 877908046 Richard Myers, HAIB 31f17c1f29dc5ab1d3acbb099641d5ea https://www.encodeproject.org/files/ENCFF000PGB/@@download/ENCFF000PGB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001UFG bed broadPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 1 87042 Richard Myers, HAIB 7d49ce5d8373b030eb6d63c42d108031 https://www.encodeproject.org/files/ENCFF001UFG/@@download/ENCFF001UFG.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001UFH bed broadPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 1 23251 Richard Myers, HAIB a13f0437a0f1d016a5f1a79c2499c961 https://www.encodeproject.org/files/ENCFF001UFH/@@download/ENCFF001UFH.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF002CKC bed narrowPeak optimal idr thresholded peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 72384 ENCODE Consortium Analysis Working Group 2919a05ba376b3d50530b2800affd7b1 https://www.encodeproject.org/files/ENCFF002CKC/@@download/ENCFF002CKC.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF644QJT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE ENCFF002CKC 235530 ENCODE Consortium 97c37db55c3d79ce865681f9684b01f6 https://www.encodeproject.org/files/ENCFF644QJT/@@download/ENCFF644QJT.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF257GMO bam unfiltered alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFY, ENCFF643CGH 960695732 ENCODE Processing Pipeline 0c0e04e206318d3a72c134d2a9e0ff26 https://www.encodeproject.org/files/ENCFF257GMO/@@download/ENCFF257GMO.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF404QMD bam alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFY, ENCFF643CGH 272813134 ENCODE Processing Pipeline 58df179211557df3e97d87f74a1940f1 https://www.encodeproject.org/files/ENCFF404QMD/@@download/ENCFF404QMD.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF212NXE bam unfiltered alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PGB, ENCFF643CGH 1177807552 ENCODE Processing Pipeline 0e14383d168f92f5525d8bb095600e57 https://www.encodeproject.org/files/ENCFF212NXE/@@download/ENCFF212NXE.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF964ESQ bam alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PGB, ENCFF643CGH 678130504 ENCODE Processing Pipeline 2c166cee3bb4f852c7f688c7f69a85c8 https://www.encodeproject.org/files/ENCFF964ESQ/@@download/ENCFF964ESQ.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF529FSM bam alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFY, ENCFF807MUK 272968981 ENCODE Processing Pipeline 374418505d032b4f967593887dff6739 https://www.encodeproject.org/files/ENCFF529FSM/@@download/ENCFF529FSM.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF115FYJ bam unfiltered alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PFY, ENCFF807MUK 957501824 ENCODE Processing Pipeline 01e3288faeab65420d796fd122b9ada0 https://www.encodeproject.org/files/ENCFF115FYJ/@@download/ENCFF115FYJ.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF498PCU bam alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PGB, ENCFF807MUK 678419576 ENCODE Processing Pipeline 0907a67103816d668a17dc757866f5c7 https://www.encodeproject.org/files/ENCFF498PCU/@@download/ENCFF498PCU.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF056IYF bam unfiltered alignments ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PGB, ENCFF807MUK 1171693855 ENCODE Processing Pipeline c08728a1498748b22fa1aa6c9ae84f0a https://www.encodeproject.org/files/ENCFF056IYF/@@download/ENCFF056IYF.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF556DAL bigWig signal p-value ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF404QMD 517097209 ENCODE Processing Pipeline ad9c40d94426a956b892731985cbf1b2 https://www.encodeproject.org/files/ENCFF556DAL/@@download/ENCFF556DAL.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF917ZVN bigWig signal p-value ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF964ESQ 639924239 ENCODE Processing Pipeline 5ec27cb0cc9f8c60e40b3a43f4cb4675 https://www.encodeproject.org/files/ENCFF917ZVN/@@download/ENCFF917ZVN.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF115QZF bigWig signal p-value ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF404QMD, ENCFF964ESQ 700879512 ENCODE Processing Pipeline 076ef5734d55444bd83972d38bddd351 https://www.encodeproject.org/files/ENCFF115QZF/@@download/ENCFF115QZF.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF757FWM bigWig fold change over control ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF404QMD 211060024 ENCODE Processing Pipeline 08c646bceafbec85d1a2055a4d10396b https://www.encodeproject.org/files/ENCFF757FWM/@@download/ENCFF757FWM.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF902KXM bigWig fold change over control ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF964ESQ 455429227 ENCODE Processing Pipeline 16e0a59ccb22f2ad41cae4e1e0832ed9 https://www.encodeproject.org/files/ENCFF902KXM/@@download/ENCFF902KXM.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF280RSN bed narrowPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF404QMD 3735965 ENCODE Processing Pipeline ed773a926b50ca1f318e4ca5e98a5463 https://www.encodeproject.org/files/ENCFF280RSN/@@download/ENCFF280RSN.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF016XRZ bigWig fold change over control ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF404QMD, ENCFF964ESQ 587142661 ENCODE Processing Pipeline 6bc7bf2421d39bd1fa6611a0fcdf3200 https://www.encodeproject.org/files/ENCFF016XRZ/@@download/ENCFF016XRZ.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF106UQZ bed narrowPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF964ESQ 4004624 ENCODE Processing Pipeline 0038af049ea2685e20e43fa2cfb59b6c https://www.encodeproject.org/files/ENCFF106UQZ/@@download/ENCFF106UQZ.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF923DXV bigBed narrowPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF280RSN 7965354 ENCODE Processing Pipeline aa8ba617f47faf57eea830d6027959d3 https://www.encodeproject.org/files/ENCFF923DXV/@@download/ENCFF923DXV.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF407CWP bed narrowPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF404QMD, ENCFF964ESQ 4470583 ENCODE Processing Pipeline 7fd2b5b4e7dfa809595132274401e446 https://www.encodeproject.org/files/ENCFF407CWP/@@download/ENCFF407CWP.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF405LXW bigBed narrowPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF106UQZ 8878814 ENCODE Processing Pipeline dfb03871557faa61d60f4a5dd823cf48 https://www.encodeproject.org/files/ENCFF405LXW/@@download/ENCFF405LXW.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF373FUS bed narrowPeak conservative idr thresholded peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF106UQZ, ENCFF280RSN, ENCFF407CWP, ENCFF419RSJ 49458 ENCODE Processing Pipeline a871b7053709d57b01b3efc95802783a https://www.encodeproject.org/files/ENCFF373FUS/@@download/ENCFF373FUS.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF390DRL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF373FUS 124411 ENCODE Processing Pipeline d79343d30671b826a45256a68b8d0ae8 https://www.encodeproject.org/files/ENCFF390DRL/@@download/ENCFF390DRL.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF007VFQ bigBed narrowPeak peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF407CWP 11179947 ENCODE Processing Pipeline acb6f1411550afe14051df03fa017706 https://www.encodeproject.org/files/ENCFF007VFQ/@@download/ENCFF007VFQ.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF361YXC bed narrowPeak optimal idr thresholded peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF106UQZ, ENCFF280RSN, ENCFF407CWP, ENCFF419RSJ 64188 ENCODE Processing Pipeline c5d68c094a9843dfebfb1092605233ca https://www.encodeproject.org/files/ENCFF361YXC/@@download/ENCFF361YXC.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF501FMD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BID ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens BHLHE40-human ENCAB000AEJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF361YXC 170809 ENCODE Processing Pipeline ba5506ea5e233bc79d0a9670a096bd43 https://www.encodeproject.org/files/ENCFF501FMD/@@download/ENCFF501FMD.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QTZ bam alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QUH 142586626 Richard Myers, HAIB 77fa05ed5740e1398505fbdab730b328 https://www.encodeproject.org/files/ENCFF000QTZ/@@download/ENCFF000QTZ.bam hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000QUA bam alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QUL 178804137 Richard Myers, HAIB 7b59c94a7dd0829d6ead85e6f4f82c0e https://www.encodeproject.org/files/ENCFF000QUA/@@download/ENCFF000QUA.bam hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000QUB bigBed broadPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UOJ 518057 Richard Myers, HAIB 5823377e4cd8a3cd5fb4eddd32ab54f7 https://www.encodeproject.org/files/ENCFF000QUB/@@download/ENCFF000QUB.bigBed hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000QUC bigBed broadPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UOK 168616 Richard Myers, HAIB 86941bea2661de5b08f0d26eeb0fb0e8 https://www.encodeproject.org/files/ENCFF000QUC/@@download/ENCFF000QUC.bigBed hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000QUE bigWig raw signal ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 1 16684938 Richard Myers, HAIB 735413b94fb2274cf33f0f2e4d603051 https://www.encodeproject.org/files/ENCFF000QUE/@@download/ENCFF000QUE.bigWig hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000QUF bigWig raw signal ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 1 5249374 Richard Myers, HAIB cb5abadbe4dbc56d5ff390b0edd8aae6 https://www.encodeproject.org/files/ENCFF000QUF/@@download/ENCFF000QUF.bigWig hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000QUH fastq reads ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 1 25 single-ended 94230802 Richard Myers, HAIB 10034ab185e1471f09bc7b4312deb93f https://www.encodeproject.org/files/ENCFF000QUH/@@download/ENCFF000QUH.fastq.gz Illumina Genome Analyzer /files/ENCFF000QVQ/ released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000QUL fastq reads ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 1 25 single-ended 133367966 Richard Myers, HAIB 2182bae19c948a9875e1c2ba9f0d7bfc https://www.encodeproject.org/files/ENCFF000QUL/@@download/ENCFF000QUL.fastq.gz Illumina Genome Analyzer /files/ENCFF000QVQ/ released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF001UOJ bed broadPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 1 288491 Richard Myers, HAIB 9ba824fba361eddc9b23c60c8b8f95d4 https://www.encodeproject.org/files/ENCFF001UOJ/@@download/ENCFF001UOJ.bed.gz hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF001UOK bed broadPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 1 72854 Richard Myers, HAIB f8c08421c87a500fd63603b5a82d5f60 https://www.encodeproject.org/files/ENCFF001UOK/@@download/ENCFF001UOK.bed.gz hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF002CND bed narrowPeak optimal idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 378426 ENCODE Consortium Analysis Working Group c51728b87f0d1f605b9000138b0da558 https://www.encodeproject.org/files/ENCFF002CND/@@download/ENCFF002CND.bed.gz hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance missing derived_from, biological replicates with identical biosample insufficient read depth extremely low read length ENCFF659ROO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE ENCFF002CND 795780 ENCODE Consortium 498c0f709320d7635d9b10f7964cc68a https://www.encodeproject.org/files/ENCFF659ROO/@@download/ENCFF659ROO.bigBed hg19 archived inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF320MKV bam alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000QUH, ENCFF807MUK 119377286 ENCODE Processing Pipeline 1f9fbd6af9cb3d619e6416b6e3477830 https://www.encodeproject.org/files/ENCFF320MKV/@@download/ENCFF320MKV.bam hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF997XTV bam unfiltered alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000QUH, ENCFF643CGH 166360087 ENCODE Processing Pipeline 3c3c88604f9cc2feae0a1deb649ea35a https://www.encodeproject.org/files/ENCFF997XTV/@@download/ENCFF997XTV.bam GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF054FYX bam alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000QUL, ENCFF807MUK 119405922 ENCODE Processing Pipeline d8d919ff8b169c557ce9f5f4a319308b https://www.encodeproject.org/files/ENCFF054FYX/@@download/ENCFF054FYX.bam hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF013ZLL bam unfiltered alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000QUH, ENCFF807MUK 166018535 ENCODE Processing Pipeline afd962000f101211927a9ad1e5fc448d https://www.encodeproject.org/files/ENCFF013ZLL/@@download/ENCFF013ZLL.bam hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF966NNP bam unfiltered alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000QUL, ENCFF643CGH 224200183 ENCODE Processing Pipeline dfec274729f68ad714ad1cba921856c1 https://www.encodeproject.org/files/ENCFF966NNP/@@download/ENCFF966NNP.bam GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF361ONE bam unfiltered alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000QUL, ENCFF807MUK 223962949 ENCODE Processing Pipeline 547caf3bfc027d0f8f9adeccd32ea292 https://www.encodeproject.org/files/ENCFF361ONE/@@download/ENCFF361ONE.bam hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF192KRY bam alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000QUL, ENCFF643CGH 119171175 ENCODE Processing Pipeline e8287f3f0b72c37629bd6f0f3357eeb5 https://www.encodeproject.org/files/ENCFF192KRY/@@download/ENCFF192KRY.bam GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF726LJT bam alignments ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000QUH, ENCFF643CGH 118996109 ENCODE Processing Pipeline 93a2e1448149a2ce202af35867564900 https://www.encodeproject.org/files/ENCFF726LJT/@@download/ENCFF726LJT.bam GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF978PPO bigWig fold change over control ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF054FYX, ENCFF294SLK, ENCFF320MKV 248087137 ENCODE Processing Pipeline fa017694172eeba9b8c7895ee1c0d0a4 https://www.encodeproject.org/files/ENCFF978PPO/@@download/ENCFF978PPO.bigWig hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF178HUV bigWig fold change over control ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF294SLK, ENCFF320MKV 191340314 ENCODE Processing Pipeline 5f7bd2a038b6e7a05a6e0a7e1976b66f https://www.encodeproject.org/files/ENCFF178HUV/@@download/ENCFF178HUV.bigWig hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF987WUX bigWig fold change over control ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF054FYX, ENCFF294SLK 109845650 ENCODE Processing Pipeline 64381944e3d915f9b2484442e7f8f5be https://www.encodeproject.org/files/ENCFF987WUX/@@download/ENCFF987WUX.bigWig hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF211YZA bigBed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF229DJA 12811163 ENCODE Processing Pipeline 29d35486835e791dd3eedd9645d3d5fe https://www.encodeproject.org/files/ENCFF211YZA/@@download/ENCFF211YZA.bigBed hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF395BZZ bed narrowPeak optimal idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF229DJA, ENCFF882KTD, ENCFF943NWC 302567 ENCODE Processing Pipeline 4e19b95df0695a93ba3dc403d0d64995 https://www.encodeproject.org/files/ENCFF395BZZ/@@download/ENCFF395BZZ.bed.gz hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF943NWC bed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF294SLK, ENCFF320MKV 4381800 ENCODE Processing Pipeline ff709f8932822e4c965020216e08c271 https://www.encodeproject.org/files/ENCFF943NWC/@@download/ENCFF943NWC.bed.gz hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF882KTD bed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF054FYX, ENCFF294SLK 1711738 ENCODE Processing Pipeline f87f91d68e18cab8f0f3ffd8e24d22c4 https://www.encodeproject.org/files/ENCFF882KTD/@@download/ENCFF882KTD.bed.gz hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF715XII bigBed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF943NWC 10153306 ENCODE Processing Pipeline f3e29d90ac9285c75ad1f3018ba8207c https://www.encodeproject.org/files/ENCFF715XII/@@download/ENCFF715XII.bigBed hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF186CRI bigBed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF882KTD 3684442 ENCODE Processing Pipeline dc7765eed9e3f3dd4372553e0448172f https://www.encodeproject.org/files/ENCFF186CRI/@@download/ENCFF186CRI.bigBed hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF260VMG bed narrowPeak conservative idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF229DJA, ENCFF882KTD, ENCFF943NWC 195247 ENCODE Processing Pipeline 030040544c061b281aacaaf501894616 https://www.encodeproject.org/files/ENCFF260VMG/@@download/ENCFF260VMG.bed.gz hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF140YYQ bigWig signal p-value ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF054FYX, ENCFF294SLK, ENCFF320MKV 423183876 ENCODE Processing Pipeline 75d90812ab8d0937f6aa628b50d4b286 https://www.encodeproject.org/files/ENCFF140YYQ/@@download/ENCFF140YYQ.bigWig hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF794IDP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF260VMG 396916 ENCODE Processing Pipeline c9f61bce54f4fc548bcfdd6431b4713f https://www.encodeproject.org/files/ENCFF794IDP/@@download/ENCFF794IDP.bigBed hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF334FDL bigWig signal p-value ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF294SLK, ENCFF320MKV 333935137 ENCODE Processing Pipeline f9f887a30420a9ced1c35ab0f7bcbbb7 https://www.encodeproject.org/files/ENCFF334FDL/@@download/ENCFF334FDL.bigWig hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF229DJA bed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF054FYX, ENCFF294SLK, ENCFF320MKV 5563585 ENCODE Processing Pipeline 7574fc04e21d8a4471be105978fc595b https://www.encodeproject.org/files/ENCFF229DJA/@@download/ENCFF229DJA.bed.gz hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF299QQS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF395BZZ 546857 ENCODE Processing Pipeline 2533dac81d00d97a289b43d9e03c6bd2 https://www.encodeproject.org/files/ENCFF299QQS/@@download/ENCFF299QQS.bigBed hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF011ZOS bigWig signal p-value ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF054FYX, ENCFF294SLK 329990655 ENCODE Processing Pipeline 7152e1ca004a3d42d6cee36e5933bd66 https://www.encodeproject.org/files/ENCFF011ZOS/@@download/ENCFF011ZOS.bigWig hg19 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF131XTA bigWig fold change over control ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF192KRY, ENCFF240DER 109625743 ENCODE Processing Pipeline 8f81e6c2a1f1aee352c1c364502d9811 https://www.encodeproject.org/files/ENCFF131XTA/@@download/ENCFF131XTA.bigWig GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF614WPD bigBed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF617HLK 9988483 ENCODE Processing Pipeline 3a5d243420187e2203dd404f1391af25 https://www.encodeproject.org/files/ENCFF614WPD/@@download/ENCFF614WPD.bigBed GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF726AIC bigWig signal p-value ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF240DER, ENCFF726LJT 330455797 ENCODE Processing Pipeline ff861fd3e7e0328cef67545b19a98a7f https://www.encodeproject.org/files/ENCFF726AIC/@@download/ENCFF726AIC.bigWig GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF891NFE bigWig signal p-value ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF192KRY, ENCFF240DER 331351863 ENCODE Processing Pipeline a5eda9e7fe9297108894d555af38c1e4 https://www.encodeproject.org/files/ENCFF891NFE/@@download/ENCFF891NFE.bigWig GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF933QAU bigWig signal p-value ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF192KRY, ENCFF240DER, ENCFF726LJT 388042805 ENCODE Processing Pipeline 6dfacba830ccedd9dd38732d5226db18 https://www.encodeproject.org/files/ENCFF933QAU/@@download/ENCFF933QAU.bigWig GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF019EHP bigWig fold change over control ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF240DER, ENCFF726LJT 190368153 ENCODE Processing Pipeline b33a5c3b9bc05ca5197e8e6249ae64b3 https://www.encodeproject.org/files/ENCFF019EHP/@@download/ENCFF019EHP.bigWig GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF951WXZ bigWig fold change over control ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF192KRY, ENCFF240DER, ENCFF726LJT 251682333 ENCODE Processing Pipeline a5dbfe8118ea4b70b92deae3132f02b1 https://www.encodeproject.org/files/ENCFF951WXZ/@@download/ENCFF951WXZ.bigWig GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF617HLK bed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF240DER, ENCFF726LJT 4243866 ENCODE Processing Pipeline b1f44ad08fd1b6279cd02bf2b6374440 https://www.encodeproject.org/files/ENCFF617HLK/@@download/ENCFF617HLK.bed.gz GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF472UVR bed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF192KRY, ENCFF240DER 1706708 ENCODE Processing Pipeline 40b59df1e248e2563eb30ffe96cf7eb2 https://www.encodeproject.org/files/ENCFF472UVR/@@download/ENCFF472UVR.bed.gz GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF425LSA bed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF192KRY, ENCFF240DER, ENCFF726LJT 5644979 ENCODE Processing Pipeline e8de2f959f496e0883ee293b90bcc06d https://www.encodeproject.org/files/ENCFF425LSA/@@download/ENCFF425LSA.bed.gz GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF932TGB bigBed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF472UVR 3679565 ENCODE Processing Pipeline 4b0202b5856a964dd16cc98744f92cb0 https://www.encodeproject.org/files/ENCFF932TGB/@@download/ENCFF932TGB.bigBed GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF808LMU bigBed narrowPeak peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF425LSA 12914546 ENCODE Processing Pipeline 722e8172a05ab32184d4e4fad0f78b23 https://www.encodeproject.org/files/ENCFF808LMU/@@download/ENCFF808LMU.bigBed GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF349WGE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067LTM 557628 ENCODE Processing Pipeline fcf2703f6c8ebe41c98e443307f5fe8f https://www.encodeproject.org/files/ENCFF349WGE/@@download/ENCFF349WGE.bigBed GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF067LTM bed narrowPeak optimal idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF425LSA, ENCFF472UVR, ENCFF617HLK 307868 ENCODE Processing Pipeline f5e4e87d8801efc8252cbf5924c6243a https://www.encodeproject.org/files/ENCFF067LTM/@@download/ENCFF067LTM.bed.gz GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF926GAC bed narrowPeak conservative idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF425LSA, ENCFF472UVR, ENCFF617HLK 196040 ENCODE Processing Pipeline 4e31fb4d46692dabe3e945836a070fbf https://www.encodeproject.org/files/ENCFF926GAC/@@download/ENCFF926GAC.bed.gz GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF354YIN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGA ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens FOXP2-human ENCAB000AGQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF926GAC 399111 ENCODE Processing Pipeline c9bfc2c5ebbd4c53025fb7ef4956834c https://www.encodeproject.org/files/ENCFF354YIN/@@download/ENCFF354YIN.bigBed GRCh38 released inconsistent platforms, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read depth extremely low read length ENCFF000PTJ bam alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000PTU 1155363310 Richard Myers, HAIB 9acbc1085506a9d2d3ffd168a308b0c0 https://www.encodeproject.org/files/ENCFF000PTJ/@@download/ENCFF000PTJ.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000PTK bam alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000PTV 1302768247 Richard Myers, HAIB 86a1e58f4ec3bacf5359d5908a9ccbc6 https://www.encodeproject.org/files/ENCFF000PTK/@@download/ENCFF000PTK.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000PTL bigBed broadPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UIK 159329 Richard Myers, HAIB 741fe0c3e8cc503a022a5914d75b7c4c https://www.encodeproject.org/files/ENCFF000PTL/@@download/ENCFF000PTL.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000PTM bigBed broadPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UIL 154608 Richard Myers, HAIB 8f4a5941019f7a654e86bedb4e85fa79 https://www.encodeproject.org/files/ENCFF000PTM/@@download/ENCFF000PTM.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000PTN bigWig raw signal ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 1 140253235 Richard Myers, HAIB 798f7d1b9cc5cc23668c8c362551a7ad https://www.encodeproject.org/files/ENCFF000PTN/@@download/ENCFF000PTN.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000PTP bigWig raw signal ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 1 123563857 Richard Myers, HAIB 32085c37f435cccabe5530e41183cc30 https://www.encodeproject.org/files/ENCFF000PTP/@@download/ENCFF000PTP.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000PTU fastq reads ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1174433643 Richard Myers, HAIB 47711bc89f922d59bbcd752beee2d22a https://www.encodeproject.org/files/ENCFF000PTU/@@download/ENCFF000PTU.fastq.gz HiSeq 2000 /files/ENCFF000PVC/ released low read depth biological replicates with identical biosample ENCFF000PTV fastq reads ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1349046004 Richard Myers, HAIB 12d570aa1b27e2c50660fb0f7db48c1c https://www.encodeproject.org/files/ENCFF000PTV/@@download/ENCFF000PTV.fastq.gz HiSeq 2000 /files/ENCFF000PVC/ released low read depth biological replicates with identical biosample ENCFF001UIK bed broadPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 1 73219 Richard Myers, HAIB ce7423dce75a47671a189408237e2ce2 https://www.encodeproject.org/files/ENCFF001UIK/@@download/ENCFF001UIK.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF001UIL bed broadPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 1 67762 Richard Myers, HAIB 83aee31f0885a44a253f2bdf51a7ba39 https://www.encodeproject.org/files/ENCFF001UIL/@@download/ENCFF001UIL.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF728ACG bam unfiltered alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PTU, ENCFF643CGH 1245801432 ENCODE Processing Pipeline e40fe336a187d89e0ac83b95943e50d8 https://www.encodeproject.org/files/ENCFF728ACG/@@download/ENCFF728ACG.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF540XOR bam unfiltered alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PTV, ENCFF643CGH 1392519668 ENCODE Processing Pipeline 6eb2aab8729f1c5d1b96aefb67c7c8e1 https://www.encodeproject.org/files/ENCFF540XOR/@@download/ENCFF540XOR.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF282IXA bam alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PTV, ENCFF643CGH 981081485 ENCODE Processing Pipeline c7b97e187b2740824f8b0147b39f7501 https://www.encodeproject.org/files/ENCFF282IXA/@@download/ENCFF282IXA.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF662PDI bam alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PTU, ENCFF643CGH 901539713 ENCODE Processing Pipeline b2fe55ad1ac050ab6138a627be0cb52e https://www.encodeproject.org/files/ENCFF662PDI/@@download/ENCFF662PDI.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF260BJG bam unfiltered alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PTU, ENCFF807MUK 1241575786 ENCODE Processing Pipeline 9f0481bacd0618fc7c0e73dadcd71707 https://www.encodeproject.org/files/ENCFF260BJG/@@download/ENCFF260BJG.bam hg19 released low read depth biological replicates with identical biosample ENCFF497ISN bam unfiltered alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PTV, ENCFF807MUK 1388453192 ENCODE Processing Pipeline d78f8a2ed462a528c4a067f962a560de https://www.encodeproject.org/files/ENCFF497ISN/@@download/ENCFF497ISN.bam hg19 released low read depth biological replicates with identical biosample ENCFF704SGZ bam alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PTU, ENCFF807MUK 901805194 ENCODE Processing Pipeline 9c6bdcd0309f54cce268d34e5c0b8d90 https://www.encodeproject.org/files/ENCFF704SGZ/@@download/ENCFF704SGZ.bam hg19 released low read depth biological replicates with identical biosample ENCFF839FNS bam alignments ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PTV, ENCFF807MUK 981279339 ENCODE Processing Pipeline 673b366e8d8806594b205150b12b4bb8 https://www.encodeproject.org/files/ENCFF839FNS/@@download/ENCFF839FNS.bam hg19 released low read depth biological replicates with identical biosample ENCFF647DHT bed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF839FNS, ENCFF880DIZ 5076666 ENCODE Processing Pipeline 1bc765088eadfbe7b154cd6d59757a55 https://www.encodeproject.org/files/ENCFF647DHT/@@download/ENCFF647DHT.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF902HEC bigWig fold change over control ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF839FNS, ENCFF880DIZ 397738554 ENCODE Processing Pipeline a2495ea7b8c011919709a948fc7f6de3 https://www.encodeproject.org/files/ENCFF902HEC/@@download/ENCFF902HEC.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF394XUX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF280GDT 375937 ENCODE Processing Pipeline 5cc138acec57cf6bc2226500e7d53881 https://www.encodeproject.org/files/ENCFF394XUX/@@download/ENCFF394XUX.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF904KNO bigWig signal p-value ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF839FNS, ENCFF880DIZ 428734805 ENCODE Processing Pipeline 755307ffefe9430c872e8e29732ee6bc https://www.encodeproject.org/files/ENCFF904KNO/@@download/ENCFF904KNO.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF518PRL bigWig fold change over control ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF704SGZ, ENCFF880DIZ 352574215 ENCODE Processing Pipeline aa278f1c34dfc1b2be029daf48ca2ce2 https://www.encodeproject.org/files/ENCFF518PRL/@@download/ENCFF518PRL.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF922SVY bigBed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF647DHT 11036527 ENCODE Processing Pipeline a8f47943687ae874980d8c9d8cda8f96 https://www.encodeproject.org/files/ENCFF922SVY/@@download/ENCFF922SVY.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF052MMZ bigBed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF847KJV 10405376 ENCODE Processing Pipeline 34d23d5aa2e620cee83597ecd41b1ee9 https://www.encodeproject.org/files/ENCFF052MMZ/@@download/ENCFF052MMZ.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF401OBH bigWig fold change over control ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF704SGZ, ENCFF839FNS, ENCFF880DIZ 634012003 ENCODE Processing Pipeline 6b7af25d46f741288b11a4465f4dac67 https://www.encodeproject.org/files/ENCFF401OBH/@@download/ENCFF401OBH.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF832CHV bigBed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF148CAJ 11115125 ENCODE Processing Pipeline 55ed1ba4211e2e88c7ba7fb2a1c0c1cc https://www.encodeproject.org/files/ENCFF832CHV/@@download/ENCFF832CHV.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF280GDT bed narrowPeak optimal idr thresholded peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF148CAJ, ENCFF647DHT, ENCFF847KJV 165440 ENCODE Processing Pipeline 703045c5651246291956c1efe81a8e2e https://www.encodeproject.org/files/ENCFF280GDT/@@download/ENCFF280GDT.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF965YGO bigWig signal p-value ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF704SGZ, ENCFF880DIZ 385664869 ENCODE Processing Pipeline d193e452618b95bb678b8226028ba9f4 https://www.encodeproject.org/files/ENCFF965YGO/@@download/ENCFF965YGO.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF622GLV bigWig signal p-value ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF704SGZ, ENCFF839FNS, ENCFF880DIZ 519127830 ENCODE Processing Pipeline e95cd26ed0356ad5855ccf2ed3d80fc1 https://www.encodeproject.org/files/ENCFF622GLV/@@download/ENCFF622GLV.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF847KJV bed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF704SGZ, ENCFF880DIZ 4166481 ENCODE Processing Pipeline 37c9960d1e9a499802d5acda354727c2 https://www.encodeproject.org/files/ENCFF847KJV/@@download/ENCFF847KJV.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF148CAJ bed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF704SGZ, ENCFF839FNS, ENCFF880DIZ 5124547 ENCODE Processing Pipeline 47be4310e7441962a0909fc330917f6e https://www.encodeproject.org/files/ENCFF148CAJ/@@download/ENCFF148CAJ.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF364ZKO bed narrowPeak conservative idr thresholded peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF148CAJ, ENCFF647DHT, ENCFF847KJV 154516 ENCODE Processing Pipeline c10a7ce6ea2c9d0f160cbcf866bdd6dd https://www.encodeproject.org/files/ENCFF364ZKO/@@download/ENCFF364ZKO.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF447LVA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF364ZKO 358159 ENCODE Processing Pipeline 4d9235f072ef8b20903ee627eb5ff0ac https://www.encodeproject.org/files/ENCFF447LVA/@@download/ENCFF447LVA.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF265KEX bigWig signal p-value ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF282IXA, ENCFF895MWF 508164666 ENCODE Processing Pipeline a443c3e55af349ef67b352024df5e0bc https://www.encodeproject.org/files/ENCFF265KEX/@@download/ENCFF265KEX.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF662EOA bed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF282IXA, ENCFF895MWF 5070683 ENCODE Processing Pipeline 13aa4c9d38592fc2b4c07758e21dc8e5 https://www.encodeproject.org/files/ENCFF662EOA/@@download/ENCFF662EOA.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF591TKX bigBed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF647MCB 11122574 ENCODE Processing Pipeline 70c91a902659b48d9651d2f08ba7136b https://www.encodeproject.org/files/ENCFF591TKX/@@download/ENCFF591TKX.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF387FKQ bed narrowPeak conservative idr thresholded peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF449WCD, ENCFF647MCB, ENCFF662EOA 154683 ENCODE Processing Pipeline c0102babc32760e9683a0495ad7e7b80 https://www.encodeproject.org/files/ENCFF387FKQ/@@download/ENCFF387FKQ.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF921QBP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF564YAP 382239 ENCODE Processing Pipeline f899585da6f0f7b85e40fe192099ad24 https://www.encodeproject.org/files/ENCFF921QBP/@@download/ENCFF921QBP.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF603CVY bigWig fold change over control ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF282IXA, ENCFF895MWF 396242217 ENCODE Processing Pipeline 996a2bde6b06f4d8ce050d54f408cc3b https://www.encodeproject.org/files/ENCFF603CVY/@@download/ENCFF603CVY.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF676HMT bigWig signal p-value ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF662PDI, ENCFF895MWF 418252124 ENCODE Processing Pipeline 45c821108ca9512a6548ade409294bfe https://www.encodeproject.org/files/ENCFF676HMT/@@download/ENCFF676HMT.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF969ATY bigWig fold change over control ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF662PDI, ENCFF895MWF 347894449 ENCODE Processing Pipeline 497ad9f07df7d659ca434cca86985848 https://www.encodeproject.org/files/ENCFF969ATY/@@download/ENCFF969ATY.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF426TJC bigBed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF449WCD 10420559 ENCODE Processing Pipeline 771045aba3c1b7e2c36f23bac684111c https://www.encodeproject.org/files/ENCFF426TJC/@@download/ENCFF426TJC.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF564YAP bed narrowPeak optimal idr thresholded peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF449WCD, ENCFF647MCB, ENCFF662EOA 169484 ENCODE Processing Pipeline 51694e4067f5c990ee7c6539b525976a https://www.encodeproject.org/files/ENCFF564YAP/@@download/ENCFF564YAP.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF721YIM bigWig signal p-value ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF282IXA, ENCFF662PDI, ENCFF895MWF 519157495 ENCODE Processing Pipeline 932c8d51f58b4ed6202799d9a6ef6a65 https://www.encodeproject.org/files/ENCFF721YIM/@@download/ENCFF721YIM.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF724AUK bigWig fold change over control ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF282IXA, ENCFF662PDI, ENCFF895MWF 619944056 ENCODE Processing Pipeline 8ec157f595dcb86010a89a60e1a28735 https://www.encodeproject.org/files/ENCFF724AUK/@@download/ENCFF724AUK.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF449WCD bed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF662PDI, ENCFF895MWF 4165696 ENCODE Processing Pipeline 44455b281ddd5e2adae720b5a639e84e https://www.encodeproject.org/files/ENCFF449WCD/@@download/ENCFF449WCD.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF647MCB bed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF282IXA, ENCFF662PDI, ENCFF895MWF 5116794 ENCODE Processing Pipeline d8d7dd5d8771c62be7457c91125e37cb https://www.encodeproject.org/files/ENCFF647MCB/@@download/ENCFF647MCB.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF389SFK bigBed narrowPeak peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF662EOA 11043766 ENCODE Processing Pipeline 4e2b70c3ab76c64deb9f56a63beb0305 https://www.encodeproject.org/files/ENCFF389SFK/@@download/ENCFF389SFK.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF819NUT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BTK ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF387FKQ 359526 ENCODE Processing Pipeline 0fe466574017d8326b68f664753a9ed8 https://www.encodeproject.org/files/ENCFF819NUT/@@download/ENCFF819NUT.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF000QHX bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QII 784196004 Richard Myers, HAIB 8ee1e1089b166eee4c4caa9f4f2ee801 https://www.encodeproject.org/files/ENCFF000QHX/@@download/ENCFF000QHX.bam hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QHY bigBed broadPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULP 102111 Richard Myers, HAIB fe840ff59e043f1a7136befb624d9596 https://www.encodeproject.org/files/ENCFF000QHY/@@download/ENCFF000QHY.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QHZ bigBed broadPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULQ 126693 Richard Myers, HAIB 623faee356465efa0c9a80cc5b60f4f7 https://www.encodeproject.org/files/ENCFF000QHZ/@@download/ENCFF000QHZ.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QIA bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QIM 985093791 Richard Myers, HAIB fd2ca68e20ea886131dee15b5b154ac8 https://www.encodeproject.org/files/ENCFF000QIA/@@download/ENCFF000QIA.bam hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QIC bigWig raw signal ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 3764647 Richard Myers, HAIB f10540de9bb61889ffb457609cc96272 https://www.encodeproject.org/files/ENCFF000QIC/@@download/ENCFF000QIC.bigWig hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QIE bigWig raw signal ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 8907374 Richard Myers, HAIB 74a0b6c12cd8d7e56d20f12233dc999f https://www.encodeproject.org/files/ENCFF000QIE/@@download/ENCFF000QIE.bigWig hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QII fastq reads ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 657079315 Richard Myers, HAIB f0a12c56bcae296ba13d617ff6c3f57f https://www.encodeproject.org/files/ENCFF000QII/@@download/ENCFF000QII.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QIM fastq reads ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 926068600 Richard Myers, HAIB eec490d05f0fa4be5e79023129b8d259 https://www.encodeproject.org/files/ENCFF000QIM/@@download/ENCFF000QIM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF001ULP bed broadPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 35779 Richard Myers, HAIB 0ac5cef0b3bc1b0497ea21e7eb8da507 https://www.encodeproject.org/files/ENCFF001ULP/@@download/ENCFF001ULP.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF001ULQ bed broadPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 40467 Richard Myers, HAIB f79b1ab3b2c7b388a852daf0bac68a81 https://www.encodeproject.org/files/ENCFF001ULQ/@@download/ENCFF001ULQ.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CMS bed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 69164 ENCODE Consortium Analysis Working Group 063d398298f51274e96c4d9e0cb76741 https://www.encodeproject.org/files/ENCFF002CMS/@@download/ENCFF002CMS.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF006OCC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE ENCFF002CMS 198350 ENCODE Consortium 6c6069949d1fd30f5fc9130f97042545 https://www.encodeproject.org/files/ENCFF006OCC/@@download/ENCFF006OCC.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF684LYI bam unfiltered alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QII, ENCFF643CGH 925082323 ENCODE Processing Pipeline b6a62fbb9d2956754e7d4b35a4cd0296 https://www.encodeproject.org/files/ENCFF684LYI/@@download/ENCFF684LYI.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF518PIS bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QII, ENCFF643CGH 545582575 ENCODE Processing Pipeline 2d134746c5a0b5a77cf3d00ba3817c07 https://www.encodeproject.org/files/ENCFF518PIS/@@download/ENCFF518PIS.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF940IQI bam unfiltered alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIM, ENCFF643CGH 1177649527 ENCODE Processing Pipeline 57e73a00cab1e00a6dc014e4cbe6cd4c https://www.encodeproject.org/files/ENCFF940IQI/@@download/ENCFF940IQI.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF126SXE bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIM, ENCFF643CGH 629717843 ENCODE Processing Pipeline 8edbd9669942b239360d400c23a0cdc8 https://www.encodeproject.org/files/ENCFF126SXE/@@download/ENCFF126SXE.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF527PHQ bam unfiltered alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QII, ENCFF807MUK 921657949 ENCODE Processing Pipeline f7a9c1a72685c60f5ca0530b26c78aa0 https://www.encodeproject.org/files/ENCFF527PHQ/@@download/ENCFF527PHQ.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF335FQW bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QII, ENCFF807MUK 545875538 ENCODE Processing Pipeline 55dc39b0bbcbe3470fd74f804c0d4ebf https://www.encodeproject.org/files/ENCFF335FQW/@@download/ENCFF335FQW.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF453XQE bam unfiltered alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIM, ENCFF807MUK 1175076985 ENCODE Processing Pipeline c72383f26011dab6e654a878e91cf0f1 https://www.encodeproject.org/files/ENCFF453XQE/@@download/ENCFF453XQE.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF085YNW bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIM, ENCFF807MUK 630052343 ENCODE Processing Pipeline f06dd42b3dc1e5eaf00ca6d758a40b06 https://www.encodeproject.org/files/ENCFF085YNW/@@download/ENCFF085YNW.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF608BKQ bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF518PIS, ENCFF772PJM 200157997 ENCODE Processing Pipeline ced1cfbbf233eedcd68ce68267a54dbb https://www.encodeproject.org/files/ENCFF608BKQ/@@download/ENCFF608BKQ.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF162CVB bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF126SXE, ENCFF772PJM 209509737 ENCODE Processing Pipeline 5fc8930b89d0c3b839a7dbaa2f0d1d74 https://www.encodeproject.org/files/ENCFF162CVB/@@download/ENCFF162CVB.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF160QUN bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF126SXE, ENCFF518PIS, ENCFF772PJM 182168595 ENCODE Processing Pipeline 6f1252f25be6bbb581074273629962f5 https://www.encodeproject.org/files/ENCFF160QUN/@@download/ENCFF160QUN.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF355WZJ bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF518PIS, ENCFF772PJM 205610490 ENCODE Processing Pipeline 5eb20d1eee0d03a4098b2698e27dac05 https://www.encodeproject.org/files/ENCFF355WZJ/@@download/ENCFF355WZJ.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF495MIW bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF126SXE, ENCFF772PJM 227130040 ENCODE Processing Pipeline f14f090a030bf8efcaf013913752a917 https://www.encodeproject.org/files/ENCFF495MIW/@@download/ENCFF495MIW.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF665COJ bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF126SXE, ENCFF518PIS, ENCFF772PJM 387352882 ENCODE Processing Pipeline c2c86ab59e43296e9027ff6fd11f2b17 https://www.encodeproject.org/files/ENCFF665COJ/@@download/ENCFF665COJ.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF885BXV bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF518PIS, ENCFF772PJM 94123 ENCODE Processing Pipeline a6e58c04c994e4fa23083b2996b36cf5 https://www.encodeproject.org/files/ENCFF885BXV/@@download/ENCFF885BXV.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF020JUH bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF126SXE, ENCFF518PIS, ENCFF772PJM 4746793 ENCODE Processing Pipeline dab4aba425eb3588b6db87887ad52b48 https://www.encodeproject.org/files/ENCFF020JUH/@@download/ENCFF020JUH.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF824FNL bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF126SXE, ENCFF772PJM 197835 ENCODE Processing Pipeline 434c8469eefddfabcf849756288c9859 https://www.encodeproject.org/files/ENCFF824FNL/@@download/ENCFF824FNL.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF869EMY bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF885BXV 271249 ENCODE Processing Pipeline 2f901584cdc688c9379a9bb9d906d548 https://www.encodeproject.org/files/ENCFF869EMY/@@download/ENCFF869EMY.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF495GWA bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF020JUH 10704572 ENCODE Processing Pipeline a726e01de63cb232f92337ad81615f1d https://www.encodeproject.org/files/ENCFF495GWA/@@download/ENCFF495GWA.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF270QLC bed narrowPeak conservative idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF020JUH, ENCFF419RSJ, ENCFF824FNL, ENCFF885BXV 7565 ENCODE Processing Pipeline 3bd5df735547bfb68148701d63779b78 https://www.encodeproject.org/files/ENCFF270QLC/@@download/ENCFF270QLC.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF155JWI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF270QLC 57570 ENCODE Processing Pipeline ecc52310b5a4af1b634db4134b344a7c https://www.encodeproject.org/files/ENCFF155JWI/@@download/ENCFF155JWI.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF852NOL bed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF020JUH, ENCFF419RSJ, ENCFF824FNL, ENCFF885BXV 12435 ENCODE Processing Pipeline 5cf6d1f9a14bbdcedf73fff57d04e6fe https://www.encodeproject.org/files/ENCFF852NOL/@@download/ENCFF852NOL.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF252SVP bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF824FNL 494540 ENCODE Processing Pipeline 173506162bdbb842eaaf9157356a24c5 https://www.encodeproject.org/files/ENCFF252SVP/@@download/ENCFF252SVP.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF555GQK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF852NOL 65157 ENCODE Processing Pipeline d271b36be8da9b345b132d21d90f34ef https://www.encodeproject.org/files/ENCFF555GQK/@@download/ENCFF555GQK.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF312JMJ fastq reads ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF271TKP 1963419535 Richard Myers, HAIB 01ef5b814c68f044c7f9efccb2314d03 SRA:SRR6213383 https://www.encodeproject.org/files/ENCFF312JMJ/@@download/ENCFF312JMJ.fastq.gz HiSeq 2000 /files/ENCFF589EEX/ released antibody characterized with exemption ENCFF271TKP fastq reads ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF312JMJ 1883393410 Richard Myers, HAIB 9d11342e284dbff330ab2059e4b3ac45 SRA:SRR6213383 https://www.encodeproject.org/files/ENCFF271TKP/@@download/ENCFF271TKP.fastq.gz HiSeq 2000 /files/ENCFF732JFN/ released antibody characterized with exemption ENCFF668QFL bam unfiltered alignments ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF271TKP, ENCFF312JMJ, ENCFF807MUK 4674267266 ENCODE Processing Pipeline c5609c81eaab790b61989064f704fc35 https://www.encodeproject.org/files/ENCFF668QFL/@@download/ENCFF668QFL.bam hg19 released antibody characterized with exemption ENCFF477OJL bam alignments ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF271TKP, ENCFF312JMJ, ENCFF807MUK 3505224849 ENCODE Processing Pipeline 0ecb83ac3845affa1d26228e2ae579bb https://www.encodeproject.org/files/ENCFF477OJL/@@download/ENCFF477OJL.bam hg19 released antibody characterized with exemption ENCFF592ZLX bam unfiltered alignments ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF271TKP, ENCFF312JMJ, ENCFF643CGH 4691047623 ENCODE Processing Pipeline 3889a0601b4a8ffc029de93fab8490c6 https://www.encodeproject.org/files/ENCFF592ZLX/@@download/ENCFF592ZLX.bam GRCh38 released antibody characterized with exemption ENCFF369KMY bam alignments ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF271TKP, ENCFF312JMJ, ENCFF643CGH 3507694968 ENCODE Processing Pipeline 4c5ad7fa65e6b67eb494ac4da3997ca4 https://www.encodeproject.org/files/ENCFF369KMY/@@download/ENCFF369KMY.bam GRCh38 released antibody characterized with exemption ENCFF258FCQ bigWig fold change over control ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF369KMY 1127504678 ENCODE Processing Pipeline 2aeadc1fa98e4a0c7ecedc8dc51c1d45 https://www.encodeproject.org/files/ENCFF258FCQ/@@download/ENCFF258FCQ.bigWig GRCh38 released antibody characterized with exemption ENCFF607RUW bed narrowPeak peaks ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF369KMY 6637950 ENCODE Processing Pipeline 33c0e9d5a4e038251fb6d41ebf46f151 https://www.encodeproject.org/files/ENCFF607RUW/@@download/ENCFF607RUW.bed.gz GRCh38 released antibody characterized with exemption ENCFF041STG bigBed narrowPeak peaks ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF607RUW 11231234 ENCODE Processing Pipeline 01e149dece1f0bc80b14fb6571e066e9 https://www.encodeproject.org/files/ENCFF041STG/@@download/ENCFF041STG.bigBed GRCh38 released antibody characterized with exemption ENCFF978RPI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF607RUW 1484 ENCODE Processing Pipeline 44bed463ea48da3123a52131bfa6b59b https://www.encodeproject.org/files/ENCFF978RPI/@@download/ENCFF978RPI.bed.gz GRCh38 released antibody characterized with exemption ENCFF052LID bigWig signal p-value ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF369KMY 1169851671 ENCODE Processing Pipeline 1a05175c99a1479c5af0a8dc28f9539f https://www.encodeproject.org/files/ENCFF052LID/@@download/ENCFF052LID.bigWig GRCh38 released antibody characterized with exemption ENCFF334BGA bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF978RPI 79628 ENCODE Processing Pipeline 8c52938993de040489bae2bf2310f50f https://www.encodeproject.org/files/ENCFF334BGA/@@download/ENCFF334BGA.bigBed GRCh38 released antibody characterized with exemption ENCFF354WUT bigWig signal p-value ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF477OJL 1333401835 ENCODE Processing Pipeline 0c088760281dc5dc61d1f7410f860ef0 https://www.encodeproject.org/files/ENCFF354WUT/@@download/ENCFF354WUT.bigWig hg19 released antibody characterized with exemption ENCFF249NBL bigWig fold change over control ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF477OJL 1135177597 ENCODE Processing Pipeline b88bd6859126fc4961b0ebf2553c8aaf https://www.encodeproject.org/files/ENCFF249NBL/@@download/ENCFF249NBL.bigWig hg19 released antibody characterized with exemption ENCFF484FFL bed narrowPeak peaks ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF477OJL 6478668 ENCODE Processing Pipeline a1f4e5f7bd44b1c1a53e806299af61df https://www.encodeproject.org/files/ENCFF484FFL/@@download/ENCFF484FFL.bed.gz hg19 released antibody characterized with exemption ENCFF209VXA bigBed narrowPeak peaks ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF484FFL 11042542 ENCODE Processing Pipeline 30ba821aae8b9fe057c8023fa5644371 https://www.encodeproject.org/files/ENCFF209VXA/@@download/ENCFF209VXA.bigBed hg19 released antibody characterized with exemption ENCFF666CBK bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF996UFS 70495 ENCODE Processing Pipeline a625d28dbd89e63dc53d3e258804a72d https://www.encodeproject.org/files/ENCFF666CBK/@@download/ENCFF666CBK.bigBed hg19 released antibody characterized with exemption ENCFF996UFS bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR432OIW ChIP-seq UBERON:0008367 breast epithelium tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF484FFL 3540 ENCODE Processing Pipeline 448a77046313d13881dfd28d4939af81 https://www.encodeproject.org/files/ENCFF996UFS/@@download/ENCFF996UFS.bed.gz hg19 released antibody characterized with exemption ENCFF668XNA fastq reads ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF299MXH 2783674190 Richard Myers, HAIB 4c94f766015e867e6a9cad58177b507e SRA:SRR6212964 https://www.encodeproject.org/files/ENCFF668XNA/@@download/ENCFF668XNA.fastq.gz HiSeq 2000 /files/ENCFF875MBM/ released antibody characterized with exemption ENCFF299MXH fastq reads ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF668XNA 2832695157 Richard Myers, HAIB cf7969e068fbfe8d9c94457768a61481 SRA:SRR6212964 https://www.encodeproject.org/files/ENCFF299MXH/@@download/ENCFF299MXH.fastq.gz HiSeq 2000 /files/ENCFF267TPL/ released antibody characterized with exemption ENCFF116QLL bam alignments ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF299MXH, ENCFF668XNA, ENCFF807MUK 4916883956 ENCODE Processing Pipeline 12f3ea9e4b40e5a7fbf3efb41e1cadee https://www.encodeproject.org/files/ENCFF116QLL/@@download/ENCFF116QLL.bam hg19 released antibody characterized with exemption ENCFF286TIN bam unfiltered alignments ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF299MXH, ENCFF668XNA, ENCFF807MUK 6596841133 ENCODE Processing Pipeline 943441fb4c891c1336580b5af725cca0 https://www.encodeproject.org/files/ENCFF286TIN/@@download/ENCFF286TIN.bam hg19 released antibody characterized with exemption ENCFF297HVO bam unfiltered alignments ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF299MXH, ENCFF643CGH, ENCFF668XNA 6622300904 ENCODE Processing Pipeline 1eb0825b3306fc09b19360e31c0aa4cb https://www.encodeproject.org/files/ENCFF297HVO/@@download/ENCFF297HVO.bam GRCh38 released antibody characterized with exemption ENCFF187XIG bam alignments ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF299MXH, ENCFF643CGH, ENCFF668XNA 4919182361 ENCODE Processing Pipeline 0f15b416f8245b87b3355d9fbf96cb26 https://www.encodeproject.org/files/ENCFF187XIG/@@download/ENCFF187XIG.bam GRCh38 released antibody characterized with exemption ENCFF033TSQ bigWig fold change over control ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF116QLL 2262263096 ENCODE Processing Pipeline ab0c97be047f5dca50532fc4df9e94f1 https://www.encodeproject.org/files/ENCFF033TSQ/@@download/ENCFF033TSQ.bigWig hg19 released antibody characterized with exemption ENCFF651APA bed narrowPeak peaks ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF116QLL 6869935 ENCODE Processing Pipeline 005f800ce8193fa33ec1214886e6d4dc https://www.encodeproject.org/files/ENCFF651APA/@@download/ENCFF651APA.bed.gz hg19 released antibody characterized with exemption ENCFF919WYW bigBed narrowPeak peaks ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF651APA 11867640 ENCODE Processing Pipeline 5f38d14a6ce6310405e3e392353b2b58 https://www.encodeproject.org/files/ENCFF919WYW/@@download/ENCFF919WYW.bigBed hg19 released antibody characterized with exemption ENCFF733JNB bed narrowPeak peaks ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF187XIG 6870851 ENCODE Processing Pipeline 65d0a1635bd6234cf6d0297a98dbd6e7 https://www.encodeproject.org/files/ENCFF733JNB/@@download/ENCFF733JNB.bed.gz GRCh38 released antibody characterized with exemption ENCFF581DTH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF651APA 299104 ENCODE Processing Pipeline fab833dcd83a585382c7c7cc5039d645 https://www.encodeproject.org/files/ENCFF581DTH/@@download/ENCFF581DTH.bed.gz hg19 released antibody characterized with exemption ENCFF410UFX bigWig fold change over control ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF187XIG 2251984572 ENCODE Processing Pipeline 41c1fcf0961c4abd922197eab4cd9b12 https://www.encodeproject.org/files/ENCFF410UFX/@@download/ENCFF410UFX.bigWig GRCh38 released antibody characterized with exemption ENCFF973VAM bigBed narrowPeak peaks ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF733JNB 11879803 ENCODE Processing Pipeline a7f4ac0fc44047bcfcbf94eedad0b7aa https://www.encodeproject.org/files/ENCFF973VAM/@@download/ENCFF973VAM.bigBed GRCh38 released antibody characterized with exemption ENCFF231LOU bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF733JNB 295330 ENCODE Processing Pipeline 28b1594b2ae4c8ebfff700e9cafaa231 https://www.encodeproject.org/files/ENCFF231LOU/@@download/ENCFF231LOU.bed.gz GRCh38 released antibody characterized with exemption ENCFF161LND bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF581DTH 568264 ENCODE Processing Pipeline 2bf1e342891244184d2025e6aa9f1264 https://www.encodeproject.org/files/ENCFF161LND/@@download/ENCFF161LND.bigBed hg19 released antibody characterized with exemption ENCFF609GTJ bigWig signal p-value ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF187XIG 2370814255 ENCODE Processing Pipeline aa070df8711e74e0e4772170bb1b075a https://www.encodeproject.org/files/ENCFF609GTJ/@@download/ENCFF609GTJ.bigWig GRCh38 released antibody characterized with exemption ENCFF974FVZ bigWig signal p-value ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF116QLL 2142557004 ENCODE Processing Pipeline 15f5864157716fba1a1eeea3bf9c4542 https://www.encodeproject.org/files/ENCFF974FVZ/@@download/ENCFF974FVZ.bigWig hg19 released antibody characterized with exemption ENCFF413PSO bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR244ZAO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF231LOU 564644 ENCODE Processing Pipeline 142aede6dfe00e919bc5e909114f8dfb https://www.encodeproject.org/files/ENCFF413PSO/@@download/ENCFF413PSO.bigBed GRCh38 released antibody characterized with exemption ENCFF000OJY bam alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OKL 878051542 Richard Myers, HAIB c569bb6c72f94d8271a79574153a2f7d https://www.encodeproject.org/files/ENCFF000OJY/@@download/ENCFF000OJY.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OKA bigBed broadPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAG 216862 Richard Myers, HAIB 867090dd4b83c14ddfa58346fc751616 https://www.encodeproject.org/files/ENCFF000OKA/@@download/ENCFF000OKA.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OKB bigBed broadPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAH 604325 Richard Myers, HAIB 791af362501cc28491f35fcd3936bc8d https://www.encodeproject.org/files/ENCFF000OKB/@@download/ENCFF000OKB.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OKC bam alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OKM 766069320 Richard Myers, HAIB 8263b500464fd944bc9bd9272c49f202 https://www.encodeproject.org/files/ENCFF000OKC/@@download/ENCFF000OKC.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OKE bigWig raw signal ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 9312298 Richard Myers, HAIB 510390ebf7f54a3e5b0e9d2fba53cad0 https://www.encodeproject.org/files/ENCFF000OKE/@@download/ENCFF000OKE.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000OKF bigWig raw signal ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 22199937 Richard Myers, HAIB 37d797679aa2c89558fdf3982b755a0c https://www.encodeproject.org/files/ENCFF000OKF/@@download/ENCFF000OKF.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000OKL fastq reads ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 816265139 Richard Myers, HAIB 65b71d6128c71fb7f0c57813f43d4dc1 https://www.encodeproject.org/files/ENCFF000OKL/@@download/ENCFF000OKL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJZ/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OKM fastq reads ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 744138477 Richard Myers, HAIB 268de799934ff82306c0406c7dfa9ca0 https://www.encodeproject.org/files/ENCFF000OKM/@@download/ENCFF000OKM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJZ/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UAG bed broadPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 111216 Richard Myers, HAIB 5a3b5c8deec2d4dd968f338b042347c9 https://www.encodeproject.org/files/ENCFF001UAG/@@download/ENCFF001UAG.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UAH bed broadPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 358949 Richard Myers, HAIB a1951118c0c1184c9ae6cbfd3da37f25 https://www.encodeproject.org/files/ENCFF001UAH/@@download/ENCFF001UAH.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CIL bed narrowPeak optimal idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 280169 ENCODE Consortium Analysis Working Group 35a74f652ae357485e259fe640f840b9 https://www.encodeproject.org/files/ENCFF002CIL/@@download/ENCFF002CIL.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF009XFV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE ENCFF002CIL 661040 ENCODE Consortium ae8eb8f13feb9a256f61456422915419 https://www.encodeproject.org/files/ENCFF009XFV/@@download/ENCFF009XFV.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF653KPG bam unfiltered alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKL, ENCFF643CGH 1045777904 ENCODE Processing Pipeline 5a517b8e7f097b1ff89520b950ba7b7b https://www.encodeproject.org/files/ENCFF653KPG/@@download/ENCFF653KPG.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF403JXW bam alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKM, ENCFF643CGH 457008058 ENCODE Processing Pipeline 5c11f35c75ea7388c49490bf54e52d08 https://www.encodeproject.org/files/ENCFF403JXW/@@download/ENCFF403JXW.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF165NIG bam alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKL, ENCFF643CGH 533390363 ENCODE Processing Pipeline 2a44619b4248fd5f6f2de337ca92511b https://www.encodeproject.org/files/ENCFF165NIG/@@download/ENCFF165NIG.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF563LDE bam unfiltered alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKM, ENCFF643CGH 930911147 ENCODE Processing Pipeline 513d8e7e8bacb20e46ad4d8bb17f4785 https://www.encodeproject.org/files/ENCFF563LDE/@@download/ENCFF563LDE.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF278BZC bam unfiltered alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKL, ENCFF807MUK 1057832775 ENCODE Processing Pipeline 647db572f9e7eba767cafea717f6b63d https://www.encodeproject.org/files/ENCFF278BZC/@@download/ENCFF278BZC.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF613PVX bam unfiltered alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKM, ENCFF807MUK 930481519 ENCODE Processing Pipeline fdead7a976a48ad924b95942cdad45d0 https://www.encodeproject.org/files/ENCFF613PVX/@@download/ENCFF613PVX.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF525DEV bam alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKM, ENCFF807MUK 453272785 ENCODE Processing Pipeline d88afa83d2ef99db0c1600d37134f0ec https://www.encodeproject.org/files/ENCFF525DEV/@@download/ENCFF525DEV.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF656BEN bam alignments ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKL, ENCFF807MUK 527379667 ENCODE Processing Pipeline 0f1f62598cf379166116639429821da5 https://www.encodeproject.org/files/ENCFF656BEN/@@download/ENCFF656BEN.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF283OTD bigWig signal p-value ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF165NIG, ENCFF562XPJ 380362124 ENCODE Processing Pipeline b3f29f9a7da243f8c539f354dbce894b https://www.encodeproject.org/files/ENCFF283OTD/@@download/ENCFF283OTD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF466GJA bigBed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF187XSM 10798165 ENCODE Processing Pipeline b04f6d3060e526764ae08819440eb99c https://www.encodeproject.org/files/ENCFF466GJA/@@download/ENCFF466GJA.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF878ZBD bigBed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF643IZA 13219380 ENCODE Processing Pipeline af22604ac82be3bdd51f0379f1ff7532 https://www.encodeproject.org/files/ENCFF878ZBD/@@download/ENCFF878ZBD.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF836SDC bigWig fold change over control ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF165NIG, ENCFF562XPJ 275576537 ENCODE Processing Pipeline d66424d8d237d12ac00a17252bb64768 https://www.encodeproject.org/files/ENCFF836SDC/@@download/ENCFF836SDC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF791RBX bigWig fold change over control ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF403JXW, ENCFF562XPJ 250258801 ENCODE Processing Pipeline 458e9441f9b898d60835eb5b60346cb8 https://www.encodeproject.org/files/ENCFF791RBX/@@download/ENCFF791RBX.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF676CHY bigWig signal p-value ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF165NIG, ENCFF403JXW, ENCFF562XPJ 497280074 ENCODE Processing Pipeline d50677b5a8c9470d32cb40b8acf826a7 https://www.encodeproject.org/files/ENCFF676CHY/@@download/ENCFF676CHY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF100NGU bigBed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF785GHS 10767352 ENCODE Processing Pipeline 0b39589ee443ef95b9b52da459e81dca https://www.encodeproject.org/files/ENCFF100NGU/@@download/ENCFF100NGU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF300KTC bed narrowPeak conservative idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF187XSM, ENCFF419RSJ, ENCFF643IZA, ENCFF785GHS 203040 ENCODE Processing Pipeline 3d6e738bba3cdc11bb4d436169364a4d https://www.encodeproject.org/files/ENCFF300KTC/@@download/ENCFF300KTC.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF805TVJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF300KTC 430171 ENCODE Processing Pipeline 811ef19edd9363caa43651f4e5b756c9 https://www.encodeproject.org/files/ENCFF805TVJ/@@download/ENCFF805TVJ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF555YDV bigWig signal p-value ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF403JXW, ENCFF562XPJ 417769335 ENCODE Processing Pipeline 573c1676f613a259e22e3bb1ecb9c456 https://www.encodeproject.org/files/ENCFF555YDV/@@download/ENCFF555YDV.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF294KFW bigWig fold change over control ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF165NIG, ENCFF403JXW, ENCFF562XPJ 447414657 ENCODE Processing Pipeline d6291853c5f629b074502a2cc5fa80b4 https://www.encodeproject.org/files/ENCFF294KFW/@@download/ENCFF294KFW.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF785GHS bed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF165NIG, ENCFF562XPJ 5002461 ENCODE Processing Pipeline 6311ff507cddf70f27ff965ce1a52e4a https://www.encodeproject.org/files/ENCFF785GHS/@@download/ENCFF785GHS.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF187XSM bed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF403JXW, ENCFF562XPJ 5119930 ENCODE Processing Pipeline c202240fa721f8c9d15280936cbc603a https://www.encodeproject.org/files/ENCFF187XSM/@@download/ENCFF187XSM.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF643IZA bed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF165NIG, ENCFF403JXW, ENCFF562XPJ 5899730 ENCODE Processing Pipeline a6fda01895c62e16907b27ee2b8037c2 https://www.encodeproject.org/files/ENCFF643IZA/@@download/ENCFF643IZA.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF538VYU bed narrowPeak optimal idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF187XSM, ENCFF419RSJ, ENCFF643IZA, ENCFF785GHS 302478 ENCODE Processing Pipeline 6e95b9b4dd12c3117440277b099f1b40 https://www.encodeproject.org/files/ENCFF538VYU/@@download/ENCFF538VYU.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF222UVD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF538VYU 568111 ENCODE Processing Pipeline a58db61b1bcf446dca7b0227129bde4f https://www.encodeproject.org/files/ENCFF222UVD/@@download/ENCFF222UVD.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF498UJX bigWig fold change over control ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF376UIU, ENCFF656BEN 273686712 ENCODE Processing Pipeline bb6c906affc1b9729f288c279546b548 https://www.encodeproject.org/files/ENCFF498UJX/@@download/ENCFF498UJX.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF702MAB bigWig fold change over control ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF376UIU, ENCFF525DEV 248760931 ENCODE Processing Pipeline 1e78aea4b822c1340ea40bc8b9a92341 https://www.encodeproject.org/files/ENCFF702MAB/@@download/ENCFF702MAB.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF244LAU bigWig signal p-value ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF376UIU, ENCFF656BEN 390537829 ENCODE Processing Pipeline c404b16477d8e650f12226a2c5047688 https://www.encodeproject.org/files/ENCFF244LAU/@@download/ENCFF244LAU.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF994XKT bed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF376UIU, ENCFF525DEV, ENCFF656BEN 5910444 ENCODE Processing Pipeline 02c5634747f2dc5afc12a7150886cf16 https://www.encodeproject.org/files/ENCFF994XKT/@@download/ENCFF994XKT.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF939GWS bigBed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF505NSP 10751666 ENCODE Processing Pipeline 50ae933958fabdf3b21cb160d642b288 https://www.encodeproject.org/files/ENCFF939GWS/@@download/ENCFF939GWS.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF895KOH bigWig signal p-value ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF376UIU, ENCFF525DEV 469212421 ENCODE Processing Pipeline 8ec801e996153ac7635b997505272920 https://www.encodeproject.org/files/ENCFF895KOH/@@download/ENCFF895KOH.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF020GNX bigWig signal p-value ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF376UIU, ENCFF525DEV, ENCFF656BEN 499021869 ENCODE Processing Pipeline cda9d8c6af00076d42b2ba80bbbbcbfe https://www.encodeproject.org/files/ENCFF020GNX/@@download/ENCFF020GNX.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF855VZH bigWig fold change over control ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF376UIU, ENCFF525DEV, ENCFF656BEN 444548878 ENCODE Processing Pipeline cd9c56e48479193febf6e4b353a07754 https://www.encodeproject.org/files/ENCFF855VZH/@@download/ENCFF855VZH.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF081JNO bed narrowPeak optimal idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF505NSP, ENCFF519AMH, ENCFF994XKT 295188 ENCODE Processing Pipeline abed55987806d18a1d2d5f121536c7ac https://www.encodeproject.org/files/ENCFF081JNO/@@download/ENCFF081JNO.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF344CRC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF081JNO 559230 ENCODE Processing Pipeline fed8e276d5d9c30bdb8c8a77dce350fb https://www.encodeproject.org/files/ENCFF344CRC/@@download/ENCFF344CRC.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF505NSP bed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF376UIU, ENCFF656BEN 4996117 ENCODE Processing Pipeline 51117687abf0e9a6e9234feeffb4ecc2 https://www.encodeproject.org/files/ENCFF505NSP/@@download/ENCFF505NSP.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF519AMH bed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF376UIU, ENCFF525DEV 4940262 ENCODE Processing Pipeline 5af1f616d2e60b6aeaad413f0f5e6ff5 https://www.encodeproject.org/files/ENCFF519AMH/@@download/ENCFF519AMH.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF314AXL bed narrowPeak conservative idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF505NSP, ENCFF519AMH, ENCFF994XKT 200982 ENCODE Processing Pipeline 33cde1836873665ceeae0049b0d780f4 https://www.encodeproject.org/files/ENCFF314AXL/@@download/ENCFF314AXL.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF308PNT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF314AXL 427483 ENCODE Processing Pipeline 8bd3d525206299229ff03d4d52ee888e https://www.encodeproject.org/files/ENCFF308PNT/@@download/ENCFF308PNT.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF960ADZ bigBed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF519AMH 10607147 ENCODE Processing Pipeline 4b9c837ea42ff73736b138c0f4966203 https://www.encodeproject.org/files/ENCFF960ADZ/@@download/ENCFF960ADZ.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF137TLD bigBed narrowPeak peaks ENCSR000BKJ ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF994XKT 13230994 ENCODE Processing Pipeline b65259bbe0a94c4ddc7e63734c92c381 https://www.encodeproject.org/files/ENCFF137TLD/@@download/ENCFF137TLD.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000QHP bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QHU 351256754 Richard Myers, HAIB 2e5b9364f53149c1d2a14f514b3b807e https://www.encodeproject.org/files/ENCFF000QHP/@@download/ENCFF000QHP.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF000QHQ bigBed broadPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULN 472589 Richard Myers, HAIB b77fac27cf14e478f730e842fbc73405 https://www.encodeproject.org/files/ENCFF000QHQ/@@download/ENCFF000QHQ.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF000QHR bigBed broadPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULO 406171 Richard Myers, HAIB b3102ec2a97772954bb4a2c29cf0f269 https://www.encodeproject.org/files/ENCFF000QHR/@@download/ENCFF000QHR.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF000QHS bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QHW 437535423 Richard Myers, HAIB 8fc0502eb496585c18fda20b04eddc8d https://www.encodeproject.org/files/ENCFF000QHS/@@download/ENCFF000QHS.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF000QHT bigWig raw signal ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 15350943 Richard Myers, HAIB 423bd5aedf51a41a896458dcc0167b59 https://www.encodeproject.org/files/ENCFF000QHT/@@download/ENCFF000QHT.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF000QHU fastq reads ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 333919947 Richard Myers, HAIB 9981b8587f0579592d6a435071d76788 https://www.encodeproject.org/files/ENCFF000QHU/@@download/ENCFF000QHU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF000QHV bigWig raw signal ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 14363373 Richard Myers, HAIB c7969af258394ad59de418e02b8d967f https://www.encodeproject.org/files/ENCFF000QHV/@@download/ENCFF000QHV.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF000QHW fastq reads ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 447452122 Richard Myers, HAIB d69664430fbf8a628230c056b6895cda https://www.encodeproject.org/files/ENCFF000QHW/@@download/ENCFF000QHW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF001ULN bed broadPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 276976 Richard Myers, HAIB 63cbe5fe1a6dabd98368a3512aa3f4fb https://www.encodeproject.org/files/ENCFF001ULN/@@download/ENCFF001ULN.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF001ULO bed broadPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 224103 Richard Myers, HAIB 692f61773cbbb5d48feb06decb5de2af https://www.encodeproject.org/files/ENCFF001ULO/@@download/ENCFF001ULO.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF002CMR bed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 312494 ENCODE Consortium Analysis Working Group c9a0dad556d6b26898d8aea60ac58f32 https://www.encodeproject.org/files/ENCFF002CMR/@@download/ENCFF002CMR.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF311MSU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE ENCFF002CMR 871499 ENCODE Consortium b71fd4b0ed7c8d3a0e8948862befa526 https://www.encodeproject.org/files/ENCFF311MSU/@@download/ENCFF311MSU.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF993RMP bam unfiltered alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHU, ENCFF643CGH 417629498 ENCODE Processing Pipeline 0a612acaa17645ba373637c5289ab02f https://www.encodeproject.org/files/ENCFF993RMP/@@download/ENCFF993RMP.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF025QKV bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHU, ENCFF643CGH 169434641 ENCODE Processing Pipeline b23c6ea894f93cd5ba65a7481643724b https://www.encodeproject.org/files/ENCFF025QKV/@@download/ENCFF025QKV.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF075NNL bam unfiltered alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHW, ENCFF643CGH 538374354 ENCODE Processing Pipeline d447fb6f611b619c601c6396ffb2b8ad https://www.encodeproject.org/files/ENCFF075NNL/@@download/ENCFF075NNL.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF919HAZ bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHW, ENCFF643CGH 204759997 ENCODE Processing Pipeline 73ac3660da4132b949317eb9a4589d20 https://www.encodeproject.org/files/ENCFF919HAZ/@@download/ENCFF919HAZ.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF278YTL bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHU, ENCFF807MUK 169579468 ENCODE Processing Pipeline e729cbbe8493c22a8e7f8c0917da18c8 https://www.encodeproject.org/files/ENCFF278YTL/@@download/ENCFF278YTL.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF926IER bam unfiltered alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHU, ENCFF807MUK 417051309 ENCODE Processing Pipeline 97e0e41ba9e3b3184d9b4fce349a7169 https://www.encodeproject.org/files/ENCFF926IER/@@download/ENCFF926IER.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF415XRC bam unfiltered alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHW, ENCFF807MUK 537566079 ENCODE Processing Pipeline d99c4f3efade793ee39b0ca854bf1be0 https://www.encodeproject.org/files/ENCFF415XRC/@@download/ENCFF415XRC.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF077WPD bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHW, ENCFF807MUK 204909369 ENCODE Processing Pipeline 2c5284c9d80429fa4d8a06063ea865f5 https://www.encodeproject.org/files/ENCFF077WPD/@@download/ENCFF077WPD.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF580IYW bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF025QKV 161255293 ENCODE Processing Pipeline b419ceb50f345408ce5a1a6dc5dd9741 https://www.encodeproject.org/files/ENCFF580IYW/@@download/ENCFF580IYW.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF101GBL bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF025QKV, ENCFF919HAZ 204026457 ENCODE Processing Pipeline 942faaaf7844c9f6153e7c1b045e0eb1 https://www.encodeproject.org/files/ENCFF101GBL/@@download/ENCFF101GBL.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF844VWA bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF919HAZ 184341105 ENCODE Processing Pipeline fa3d34523f4b2390cbbcbdd0112dcc91 https://www.encodeproject.org/files/ENCFF844VWA/@@download/ENCFF844VWA.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF720SBY bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF919HAZ 91159091 ENCODE Processing Pipeline 6389a9be480db714ed08c5891e90a5df https://www.encodeproject.org/files/ENCFF720SBY/@@download/ENCFF720SBY.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF078KNC bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF025QKV 76793426 ENCODE Processing Pipeline ddfb915094c75f49cd7e7551e5eb3571 https://www.encodeproject.org/files/ENCFF078KNC/@@download/ENCFF078KNC.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF351VWV bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF025QKV, ENCFF919HAZ 153619321 ENCODE Processing Pipeline b4d29d301e76b90acfd4c48f5b44165f https://www.encodeproject.org/files/ENCFF351VWV/@@download/ENCFF351VWV.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF760KTM bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF025QKV, ENCFF919HAZ 4565728 ENCODE Processing Pipeline 1a317530dbe1ef4c851ce2ce8fae8212 https://www.encodeproject.org/files/ENCFF760KTM/@@download/ENCFF760KTM.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF630IND bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF290PQH 5084958 ENCODE Processing Pipeline 2ac859b6fa95264c8ee011ccb5101e8b https://www.encodeproject.org/files/ENCFF630IND/@@download/ENCFF630IND.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF290PQH bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF025QKV 2258635 ENCODE Processing Pipeline 4100b0aeb8295dfa020b3742d80b3620 https://www.encodeproject.org/files/ENCFF290PQH/@@download/ENCFF290PQH.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF637RHV bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF919HAZ 2384040 ENCODE Processing Pipeline e8ed28288299a7392c8159d5619ae412 https://www.encodeproject.org/files/ENCFF637RHV/@@download/ENCFF637RHV.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF937JNR bed narrowPeak conservative idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF290PQH, ENCFF419RSJ, ENCFF637RHV, ENCFF760KTM 311356 ENCODE Processing Pipeline 7545ae3ad70aaff5881a8b832b325fea https://www.encodeproject.org/files/ENCFF937JNR/@@download/ENCFF937JNR.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF935LXU bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF637RHV 5468578 ENCODE Processing Pipeline 53c3fa85d1b69660ef26aa19d562cc05 https://www.encodeproject.org/files/ENCFF935LXU/@@download/ENCFF935LXU.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF980NYL bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF760KTM 9959021 ENCODE Processing Pipeline 2865f03c440f86c5200570cdf2aa5acb https://www.encodeproject.org/files/ENCFF980NYL/@@download/ENCFF980NYL.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF286DCL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF937JNR 696181 ENCODE Processing Pipeline 977be24834deb59c453e79ec8239e754 https://www.encodeproject.org/files/ENCFF286DCL/@@download/ENCFF286DCL.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF988QGG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF453TIB 709351 ENCODE Processing Pipeline 1e37852b8682d5c8c752cc4cacecfd0c https://www.encodeproject.org/files/ENCFF988QGG/@@download/ENCFF988QGG.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF453TIB bed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF290PQH, ENCFF419RSJ, ENCFF637RHV, ENCFF760KTM 320021 ENCODE Processing Pipeline fb8f377ae4ee66faf20bbc08f92960dc https://www.encodeproject.org/files/ENCFF453TIB/@@download/ENCFF453TIB.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, severe bottlenecking, insufficient read depth ENCFF065ZFK fastq reads ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF655KYQ 2055290732 Richard Myers, HAIB 6b80400e52399215fda9fbbbfc46bcc3 SRA:SRR6213718 https://www.encodeproject.org/files/ENCFF065ZFK/@@download/ENCFF065ZFK.fastq.gz HiSeq 2000 /files/ENCFF610WEU/ released antibody characterized with exemption ENCFF655KYQ fastq reads ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF065ZFK 2149295176 Richard Myers, HAIB ebc0def583aa0e9027ab011065ba4294 SRA:SRR6213718 https://www.encodeproject.org/files/ENCFF655KYQ/@@download/ENCFF655KYQ.fastq.gz HiSeq 2000 /files/ENCFF950EXK/ released antibody characterized with exemption ENCFF721MRA bam unfiltered alignments ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF065ZFK, ENCFF655KYQ, ENCFF807MUK 5066890224 ENCODE Processing Pipeline 03c4b671e2515d9fc0b4f4d9740035b1 https://www.encodeproject.org/files/ENCFF721MRA/@@download/ENCFF721MRA.bam hg19 released antibody characterized with exemption ENCFF834AOC bam alignments ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF065ZFK, ENCFF655KYQ, ENCFF807MUK 3803079480 ENCODE Processing Pipeline 4ccdddccda0a08ae6acaa0feafd6b233 https://www.encodeproject.org/files/ENCFF834AOC/@@download/ENCFF834AOC.bam hg19 released antibody characterized with exemption ENCFF405UYE bam alignments ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF065ZFK, ENCFF643CGH, ENCFF655KYQ 3805033588 ENCODE Processing Pipeline 3cebcfe7f124fed1d057ed42808906fb https://www.encodeproject.org/files/ENCFF405UYE/@@download/ENCFF405UYE.bam GRCh38 released antibody characterized with exemption ENCFF177THV bam unfiltered alignments ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF065ZFK, ENCFF643CGH, ENCFF655KYQ 5088195359 ENCODE Processing Pipeline e7e9e8e7c5dd545ce99dfe07737e32ba https://www.encodeproject.org/files/ENCFF177THV/@@download/ENCFF177THV.bam GRCh38 released antibody characterized with exemption ENCFF115AYZ bigWig fold change over control ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF405UYE 1400599238 ENCODE Processing Pipeline cc141589b6625e062e14c950854cb123 https://www.encodeproject.org/files/ENCFF115AYZ/@@download/ENCFF115AYZ.bigWig GRCh38 released antibody characterized with exemption ENCFF294GHG bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF353CLB 274511 ENCODE Processing Pipeline 16dc59a9406964a72cb79ae551957ae9 https://www.encodeproject.org/files/ENCFF294GHG/@@download/ENCFF294GHG.bigBed GRCh38 released antibody characterized with exemption ENCFF991KEG bigWig signal p-value ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF405UYE 1285133040 ENCODE Processing Pipeline b0b401da9a38a7c084fba399a367abf1 https://www.encodeproject.org/files/ENCFF991KEG/@@download/ENCFF991KEG.bigWig GRCh38 released antibody characterized with exemption ENCFF779OXM bigBed narrowPeak peaks ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF565FJL 11705045 ENCODE Processing Pipeline e63bc333539e755b335b9e2ba388674e https://www.encodeproject.org/files/ENCFF779OXM/@@download/ENCFF779OXM.bigBed GRCh38 released antibody characterized with exemption ENCFF353CLB bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF565FJL 110899 ENCODE Processing Pipeline 91731521329da721a52dd2d00f7a41bb https://www.encodeproject.org/files/ENCFF353CLB/@@download/ENCFF353CLB.bed.gz GRCh38 released antibody characterized with exemption ENCFF565FJL bed narrowPeak peaks ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF405UYE 6237899 ENCODE Processing Pipeline 9726d7116137fe0a35be4ff58aa860df https://www.encodeproject.org/files/ENCFF565FJL/@@download/ENCFF565FJL.bed.gz GRCh38 released antibody characterized with exemption ENCFF394GAG bigWig signal p-value ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF834AOC 1418409950 ENCODE Processing Pipeline e9c8afc6f5544b232fc8adc993602248 https://www.encodeproject.org/files/ENCFF394GAG/@@download/ENCFF394GAG.bigWig hg19 released antibody characterized with exemption ENCFF707TYG bigWig fold change over control ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF834AOC 1396715960 ENCODE Processing Pipeline 3892042eeee45663439e02d4eb98e62d https://www.encodeproject.org/files/ENCFF707TYG/@@download/ENCFF707TYG.bigWig hg19 released antibody characterized with exemption ENCFF761ORT bed narrowPeak peaks ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF834AOC 6235660 ENCODE Processing Pipeline 6aade674d7b187f48fb318dd92c2767c https://www.encodeproject.org/files/ENCFF761ORT/@@download/ENCFF761ORT.bed.gz hg19 released antibody characterized with exemption ENCFF434UOV bigBed narrowPeak peaks ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF761ORT 11691010 ENCODE Processing Pipeline 8a674273dc9b8b041ff5f9b9d0392ab1 https://www.encodeproject.org/files/ENCFF434UOV/@@download/ENCFF434UOV.bigBed hg19 released antibody characterized with exemption ENCFF934XEQ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF761ORT 110718 ENCODE Processing Pipeline 4245a88f400cf51b7aefd5039a071c7b https://www.encodeproject.org/files/ENCFF934XEQ/@@download/ENCFF934XEQ.bed.gz hg19 released antibody characterized with exemption ENCFF712KAB bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR696LQU ChIP-seq UBERON:0000992 ovary tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF934XEQ 272423 ENCODE Processing Pipeline 28546c2ccdd11bf3d64c67f361b3cd41 https://www.encodeproject.org/files/ENCFF712KAB/@@download/ENCFF712KAB.bigBed hg19 released antibody characterized with exemption ENCFF000OJR bigBed broadPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAE 380265 Richard Myers, HAIB 7e9c0b3b68aaae266bcecc9844ab8442 https://www.encodeproject.org/files/ENCFF000OJR/@@download/ENCFF000OJR.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJS bigBed broadPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAF 231888 Richard Myers, HAIB dabdab22c2d8cd302ba90a53230fde86 https://www.encodeproject.org/files/ENCFF000OJS/@@download/ENCFF000OJS.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJT bam alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OKD 820270217 Richard Myers, HAIB 6e890286f3c38bdc6c92a18eb0b1c49a https://www.encodeproject.org/files/ENCFF000OJT/@@download/ENCFF000OJT.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJV bigWig raw signal ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 27409416 Richard Myers, HAIB dbc99977ee6f6c901b560471bc4092e0 https://www.encodeproject.org/files/ENCFF000OJV/@@download/ENCFF000OJV.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OJW bam alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OKG 1236381620 Richard Myers, HAIB 4e16e6bb944822cab96800f8aafa47f3 https://www.encodeproject.org/files/ENCFF000OJW/@@download/ENCFF000OJW.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OJX bigWig raw signal ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 14841336 Richard Myers, HAIB d24e4533a4e58d3d96d4aacc845ab341 https://www.encodeproject.org/files/ENCFF000OJX/@@download/ENCFF000OJX.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OKD fastq reads ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 826202355 Richard Myers, HAIB f3ec022ec04e0a6e740a74d15074ff24 https://www.encodeproject.org/files/ENCFF000OKD/@@download/ENCFF000OKD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OKG fastq reads ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1619015503 Richard Myers, HAIB 84702fa7c60f5a44493a9dfcd351042f https://www.encodeproject.org/files/ENCFF000OKG/@@download/ENCFF000OKG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001UAE bed broadPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 181374 Richard Myers, HAIB 66851b8e11711a87fe277d37d54e1e82 https://www.encodeproject.org/files/ENCFF001UAE/@@download/ENCFF001UAE.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UAF bed broadPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 126918 Richard Myers, HAIB ccb60447192be8d8f207ec3a66bc0f07 https://www.encodeproject.org/files/ENCFF001UAF/@@download/ENCFF001UAF.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CIK bed narrowPeak optimal idr thresholded peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 303968 ENCODE Consortium Analysis Working Group 7ab7ce6c64786d76a1fbf4222d0258a5 https://www.encodeproject.org/files/ENCFF002CIK/@@download/ENCFF002CIK.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF137HUR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE ENCFF002CIK 835551 ENCODE Consortium bbafe2a20095d29b2e12387b85d4a299 https://www.encodeproject.org/files/ENCFF137HUR/@@download/ENCFF137HUR.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF347EJS bam unfiltered alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKD, ENCFF643CGH 1074116644 ENCODE Processing Pipeline 6b61132cfaf1891d3221ad6aa59b0639 https://www.encodeproject.org/files/ENCFF347EJS/@@download/ENCFF347EJS.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF600IBV bam alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKD, ENCFF643CGH 655843932 ENCODE Processing Pipeline 106b86eb7637353ea4929b0081d1cecf https://www.encodeproject.org/files/ENCFF600IBV/@@download/ENCFF600IBV.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF837KRT bam unfiltered alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKG, ENCFF643CGH 1977870559 ENCODE Processing Pipeline cf9194464a96951e4e60a8c632ce6d84 https://www.encodeproject.org/files/ENCFF837KRT/@@download/ENCFF837KRT.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF415TYP bam alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKG, ENCFF643CGH 890678514 ENCODE Processing Pipeline dbfe0b3094d8bf2dd39a1ad1be25d207 https://www.encodeproject.org/files/ENCFF415TYP/@@download/ENCFF415TYP.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF749CGY bam alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKD, ENCFF807MUK 652291534 ENCODE Processing Pipeline 66325c346328f860bf40382a705bc6f1 https://www.encodeproject.org/files/ENCFF749CGY/@@download/ENCFF749CGY.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF519IFL bam unfiltered alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OKD, ENCFF807MUK 1070415589 ENCODE Processing Pipeline e786988b3273173ea396be4acfb02b97 https://www.encodeproject.org/files/ENCFF519IFL/@@download/ENCFF519IFL.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF898ZAD bam unfiltered alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKG, ENCFF807MUK 1970724948 ENCODE Processing Pipeline 2d553de70faf4f8cc57e6c1e9d26acf1 https://www.encodeproject.org/files/ENCFF898ZAD/@@download/ENCFF898ZAD.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF100AQB bam alignments ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OKG, ENCFF807MUK 887311453 ENCODE Processing Pipeline 6d7d89ffb6587ac4cc2b717d4ff67150 https://www.encodeproject.org/files/ENCFF100AQB/@@download/ENCFF100AQB.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF010DPP bigWig signal p-value ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF415TYP 331804576 ENCODE Processing Pipeline 0c8901e19f76e57be0a7b1ec9972d043 https://www.encodeproject.org/files/ENCFF010DPP/@@download/ENCFF010DPP.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF919CCO bigWig fold change over control ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF415TYP 305397895 ENCODE Processing Pipeline 2ff85edfc87dc10c922abc713a95f259 https://www.encodeproject.org/files/ENCFF919CCO/@@download/ENCFF919CCO.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF738KKK bigWig signal p-value ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF600IBV 324840899 ENCODE Processing Pipeline c854714f138fd4022a9d5132d4211608 https://www.encodeproject.org/files/ENCFF738KKK/@@download/ENCFF738KKK.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF146FMH bigWig signal p-value ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF415TYP, ENCFF600IBV 326978486 ENCODE Processing Pipeline ca762d0411b8363a4c7cc378e6a3dfd9 https://www.encodeproject.org/files/ENCFF146FMH/@@download/ENCFF146FMH.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF312AML bed narrowPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF415TYP 4384926 ENCODE Processing Pipeline 4fd552ea5b095960fbba34dd3f292515 https://www.encodeproject.org/files/ENCFF312AML/@@download/ENCFF312AML.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF630ZKZ bigWig fold change over control ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF415TYP, ENCFF600IBV 492241262 ENCODE Processing Pipeline 1386eac63cb97aafdc40977ace5a1680 https://www.encodeproject.org/files/ENCFF630ZKZ/@@download/ENCFF630ZKZ.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF231EBY bigWig fold change over control ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF600IBV 251465300 ENCODE Processing Pipeline 0f4944e2f3afd000386d829898a23a17 https://www.encodeproject.org/files/ENCFF231EBY/@@download/ENCFF231EBY.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF606XRT bed narrowPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF600IBV 4381263 ENCODE Processing Pipeline eb9c13f76261ca378a6645643cc33288 https://www.encodeproject.org/files/ENCFF606XRT/@@download/ENCFF606XRT.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF593OOT bed narrowPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF415TYP, ENCFF600IBV 5024882 ENCODE Processing Pipeline f2013d6e6cb9680d99159bd52c565e92 https://www.encodeproject.org/files/ENCFF593OOT/@@download/ENCFF593OOT.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF807BTH bigBed narrowPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF593OOT 11035813 ENCODE Processing Pipeline 1e9605273749a793f07c8ae80f3a5530 https://www.encodeproject.org/files/ENCFF807BTH/@@download/ENCFF807BTH.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF471NIK bed narrowPeak optimal idr thresholded peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF312AML, ENCFF419RSJ, ENCFF593OOT, ENCFF606XRT 268278 ENCODE Processing Pipeline a47b1418b60a01ad0149433e5222472d https://www.encodeproject.org/files/ENCFF471NIK/@@download/ENCFF471NIK.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF272AJS bigBed narrowPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF606XRT 10465966 ENCODE Processing Pipeline 40d3fa27d658df6d3b8d126ca23be22c https://www.encodeproject.org/files/ENCFF272AJS/@@download/ENCFF272AJS.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF731LNY bigBed narrowPeak peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF312AML 10557950 ENCODE Processing Pipeline 809ae5bd90bb786f728f58da7d155e20 https://www.encodeproject.org/files/ENCFF731LNY/@@download/ENCFF731LNY.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF851ESY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF667CNQ 572672 ENCODE Processing Pipeline 51a6412172a6eb1fdb635f696c6dadf8 https://www.encodeproject.org/files/ENCFF851ESY/@@download/ENCFF851ESY.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF200TIZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF471NIK 589979 ENCODE Processing Pipeline 6177f7814970e33ba18214912341b579 https://www.encodeproject.org/files/ENCFF200TIZ/@@download/ENCFF200TIZ.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF667CNQ bed narrowPeak conservative idr thresholded peaks ENCSR000BIM ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF312AML, ENCFF419RSJ, ENCFF593OOT, ENCFF606XRT 257873 ENCODE Processing Pipeline 93d79f7b36905dc02310284d6fb2d76e https://www.encodeproject.org/files/ENCFF667CNQ/@@download/ENCFF667CNQ.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000RHH bam alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RIH 855665243 Richard Myers, HAIB c6327d5c0e273fdbe7037ed3988d3580 https://www.encodeproject.org/files/ENCFF000RHH/@@download/ENCFF000RHH.bam hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RHI bigBed broadPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001URF 298491 Richard Myers, HAIB a2fa9b4d440fbadc4d676551c32242ed https://www.encodeproject.org/files/ENCFF000RHI/@@download/ENCFF000RHI.bigBed hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RHJ bigBed broadPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001URG 182168 Richard Myers, HAIB 5da09a7534a6a4d6455d50fb3a4553a9 https://www.encodeproject.org/files/ENCFF000RHJ/@@download/ENCFF000RHJ.bigBed hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RHK bam alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RIK 1787233861 Richard Myers, HAIB c845a310feb7ba6d91dfdcb3b263b68e https://www.encodeproject.org/files/ENCFF000RHK/@@download/ENCFF000RHK.bam hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RIB bigWig raw signal ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 31586940 Richard Myers, HAIB 5c67772907bf7009a6b81b1f2228da8c https://www.encodeproject.org/files/ENCFF000RIB/@@download/ENCFF000RIB.bigWig hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RIC bigWig raw signal ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 8332784 Richard Myers, HAIB f5f6c73522db538faa302a3e235a1f53 https://www.encodeproject.org/files/ENCFF000RIC/@@download/ENCFF000RIC.bigWig hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RIH fastq reads ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 779966779 Richard Myers, HAIB c5b8aff60484c3c321dca41085233ab9 https://www.encodeproject.org/files/ENCFF000RIH/@@download/ENCFF000RIH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RHV/ released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RIK fastq reads ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1219829813 Richard Myers, HAIB 9632fbcfca330fe5103b7f191d3626ff https://www.encodeproject.org/files/ENCFF000RIK/@@download/ENCFF000RIK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RHW/ released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001URF bed broadPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 125749 Richard Myers, HAIB 144b982b38669554d835ab13eebbf0d7 https://www.encodeproject.org/files/ENCFF001URF/@@download/ENCFF001URF.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001URG bed broadPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 83593 Richard Myers, HAIB f87256e1ed97f598a0084ee86d1d13ac https://www.encodeproject.org/files/ENCFF001URG/@@download/ENCFF001URG.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CNV bed narrowPeak optimal idr thresholded peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 272385 ENCODE Consortium Analysis Working Group 12dc7014881286d87e8c2f3746e29e6d https://www.encodeproject.org/files/ENCFF002CNV/@@download/ENCFF002CNV.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF842LFY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE ENCFF002CNV 737110 ENCODE Consortium 37c20709955ff798a4045d406a13157c https://www.encodeproject.org/files/ENCFF842LFY/@@download/ENCFF842LFY.bigBed hg19 archived low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF886WCM bam unfiltered alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIH, ENCFF643CGH 1079800583 ENCODE Processing Pipeline 6748d3d800d71ea1b1c6e2850debe283 https://www.encodeproject.org/files/ENCFF886WCM/@@download/ENCFF886WCM.bam GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF740NIN bam alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIH, ENCFF643CGH 589768443 ENCODE Processing Pipeline c1b374588893ad0f6bb82588257594a0 https://www.encodeproject.org/files/ENCFF740NIN/@@download/ENCFF740NIN.bam GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF446TBL bam alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIK, ENCFF643CGH 859969070 ENCODE Processing Pipeline 246b675d37e5f6194d45531e41027e4d https://www.encodeproject.org/files/ENCFF446TBL/@@download/ENCFF446TBL.bam GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF856GMW bam unfiltered alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIK, ENCFF643CGH 1587073489 ENCODE Processing Pipeline f0b3e1b3bdc0383fd95c70eca1152e82 https://www.encodeproject.org/files/ENCFF856GMW/@@download/ENCFF856GMW.bam GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF781IEE bam unfiltered alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIK, ENCFF807MUK 1578408367 ENCODE Processing Pipeline 08acd8610ad5db432e96b58bd98e6796 https://www.encodeproject.org/files/ENCFF781IEE/@@download/ENCFF781IEE.bam hg19 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF718DYD bam unfiltered alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIH, ENCFF807MUK 1071891377 ENCODE Processing Pipeline 2368ae7c1e3dc3eaa5139220ac81d24a https://www.encodeproject.org/files/ENCFF718DYD/@@download/ENCFF718DYD.bam hg19 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF154TCG bam alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIH, ENCFF807MUK 590045503 ENCODE Processing Pipeline 6e87028ba46303f4950df8358a43c2b9 https://www.encodeproject.org/files/ENCFF154TCG/@@download/ENCFF154TCG.bam hg19 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF191RAG bam alignments ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIK, ENCFF807MUK 860305916 ENCODE Processing Pipeline 9f8edb12e0d7594294955db058799275 https://www.encodeproject.org/files/ENCFF191RAG/@@download/ENCFF191RAG.bam hg19 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF928GES bigWig signal p-value ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF406KPS, ENCFF414YAT, ENCFF446TBL 423933523 ENCODE Processing Pipeline 649fb26162cf373ff310bcfc26144836 https://www.encodeproject.org/files/ENCFF928GES/@@download/ENCFF928GES.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF266JJK bigWig signal p-value ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF414YAT, ENCFF740NIN 280142696 ENCODE Processing Pipeline ddb7474d7c08a5410a6fe997dca00859 https://www.encodeproject.org/files/ENCFF266JJK/@@download/ENCFF266JJK.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF614JWC bigWig signal p-value ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF406KPS, ENCFF414YAT, ENCFF446TBL, ENCFF740NIN 547294401 ENCODE Processing Pipeline ae3a7f12e87d9993d2296e245ad66e29 https://www.encodeproject.org/files/ENCFF614JWC/@@download/ENCFF614JWC.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF409OWI bigWig fold change over control ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF406KPS, ENCFF414YAT, ENCFF446TBL 415294863 ENCODE Processing Pipeline 1fd01bbb97161567cdd5a5e2d15c3549 https://www.encodeproject.org/files/ENCFF409OWI/@@download/ENCFF409OWI.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF721MSH bigWig fold change over control ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF414YAT, ENCFF740NIN 280229909 ENCODE Processing Pipeline d59930e31123b227908ccec92c5c3944 https://www.encodeproject.org/files/ENCFF721MSH/@@download/ENCFF721MSH.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF468WTB bigWig fold change over control ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF406KPS, ENCFF414YAT, ENCFF446TBL, ENCFF740NIN 663571023 ENCODE Processing Pipeline 9836132d39be3ce3876c58cd25ea2f2e https://www.encodeproject.org/files/ENCFF468WTB/@@download/ENCFF468WTB.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF442SQT bed narrowPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF406KPS, ENCFF414YAT, ENCFF446TBL 4610853 ENCODE Processing Pipeline 4d09a0782db1519343fd0c1c54146743 https://www.encodeproject.org/files/ENCFF442SQT/@@download/ENCFF442SQT.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF818PZY bed narrowPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF414YAT, ENCFF740NIN 402862 ENCODE Processing Pipeline d5932f6f21606569ce97855ec6f90a58 https://www.encodeproject.org/files/ENCFF818PZY/@@download/ENCFF818PZY.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF140FCK bed narrowPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF406KPS, ENCFF414YAT, ENCFF446TBL, ENCFF740NIN 5213123 ENCODE Processing Pipeline dfeff5e6944fa388d4bd46eea6d920ad https://www.encodeproject.org/files/ENCFF140FCK/@@download/ENCFF140FCK.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF970VQE bigBed narrowPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF442SQT 10899769 ENCODE Processing Pipeline 821772f720c893a9995f1a68154e446c https://www.encodeproject.org/files/ENCFF970VQE/@@download/ENCFF970VQE.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF390HYW bigBed narrowPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF818PZY 1012496 ENCODE Processing Pipeline 65afd9ee6c334ff03210d12455935517 https://www.encodeproject.org/files/ENCFF390HYW/@@download/ENCFF390HYW.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF645LGE bed narrowPeak conservative idr thresholded peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140FCK, ENCFF419RSJ, ENCFF442SQT, ENCFF818PZY 115345 ENCODE Processing Pipeline fb4a798c650f64058ccae14f4fe08c53 https://www.encodeproject.org/files/ENCFF645LGE/@@download/ENCFF645LGE.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF073EFH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF645LGE 274663 ENCODE Processing Pipeline a52b42b95491378577e72ebfc7e923c9 https://www.encodeproject.org/files/ENCFF073EFH/@@download/ENCFF073EFH.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF814DYK bigBed narrowPeak peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140FCK 11170718 ENCODE Processing Pipeline b8f394e6eae0da8623d29ec815371906 https://www.encodeproject.org/files/ENCFF814DYK/@@download/ENCFF814DYK.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF396TFS bed narrowPeak optimal idr thresholded peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140FCK, ENCFF419RSJ, ENCFF442SQT, ENCFF818PZY 208865 ENCODE Processing Pipeline 1f7751d7034b078e160d25749f46aad8 https://www.encodeproject.org/files/ENCFF396TFS/@@download/ENCFF396TFS.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF838NTP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJS ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens genistein ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF396TFS 420123 ENCODE Processing Pipeline e4d849f368f5cda9fc1bba8a25836ae1 https://www.encodeproject.org/files/ENCFF838NTP/@@download/ENCFF838NTP.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, inconsistent target of control experiment, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OQE bam alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OQQ 724530820 Richard Myers, HAIB 146b7f702fb35270b5260f91cded141d https://www.encodeproject.org/files/ENCFF000OQE/@@download/ENCFF000OQE.bam hg19 archived low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OQF bigBed broadPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBS 352028 Richard Myers, HAIB 15c080b5159554f3e2de7690299eacfd https://www.encodeproject.org/files/ENCFF000OQF/@@download/ENCFF000OQF.bigBed hg19 archived low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OQG bigBed broadPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBT 388722 Richard Myers, HAIB caadca01941753b70d69955025697866 https://www.encodeproject.org/files/ENCFF000OQG/@@download/ENCFF000OQG.bigBed hg19 archived low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OQH bam alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OQY 831179403 Richard Myers, HAIB dd6a0abed9a452a88cf9ec8e2753d3dd https://www.encodeproject.org/files/ENCFF000OQH/@@download/ENCFF000OQH.bam hg19 archived low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OQJ bigWig raw signal ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 17091262 Richard Myers, HAIB 6170f7b8f0e9a32fa4477604fd96f879 https://www.encodeproject.org/files/ENCFF000OQJ/@@download/ENCFF000OQJ.bigWig hg19 archived low read length, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OQK bigWig raw signal ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 33732444 Richard Myers, HAIB 10f33cb4f5aa35c83b16843b2d7b4463 https://www.encodeproject.org/files/ENCFF000OQK/@@download/ENCFF000OQK.bigWig hg19 archived low read length, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OQQ fastq reads ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 877178734 Richard Myers, HAIB 5be5515604f1f5623d3dfbaeba7b57d3 https://www.encodeproject.org/files/ENCFF000OQQ/@@download/ENCFF000OQQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OQY fastq reads ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1490706784 Richard Myers, HAIB 0e0f71f493bb811d1c8746a601721f70 https://www.encodeproject.org/files/ENCFF000OQY/@@download/ENCFF000OQY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UBS bed broadPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 203718 Richard Myers, HAIB 65c2b2a9bee05f6d2d0fdc02f666262b https://www.encodeproject.org/files/ENCFF001UBS/@@download/ENCFF001UBS.bed.gz hg19 archived low read length, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UBT bed broadPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 234084 Richard Myers, HAIB 2dc16700f9523d51038a3813d5d463ec https://www.encodeproject.org/files/ENCFF001UBT/@@download/ENCFF001UBT.bed.gz hg19 archived low read length, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CJB bed narrowPeak optimal idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 272383 ENCODE Consortium Analysis Working Group fd8f0f6b21e19fa1c186d9de059c1d27 https://www.encodeproject.org/files/ENCFF002CJB/@@download/ENCFF002CJB.bed.gz hg19 archived low read length, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF265KUU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE ENCFF002CJB 609092 ENCODE Consortium 19ce24a7c1d943c729499f3ba758d965 https://www.encodeproject.org/files/ENCFF265KUU/@@download/ENCFF265KUU.bigBed hg19 archived low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF077GSV bam unfiltered alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQQ, ENCFF643CGH 1063158078 ENCODE Processing Pipeline e5e0178a0bdd0b0ee768c0d65ddcfa77 https://www.encodeproject.org/files/ENCFF077GSV/@@download/ENCFF077GSV.bam GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF696GNV bam alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQQ, ENCFF643CGH 486295506 ENCODE Processing Pipeline d206b3519215c0a17864ec520dffb719 https://www.encodeproject.org/files/ENCFF696GNV/@@download/ENCFF696GNV.bam GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF499LPH bam unfiltered alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OQY, ENCFF643CGH 1893606558 ENCODE Processing Pipeline 484e4c991f8329112d647b427c33dc78 https://www.encodeproject.org/files/ENCFF499LPH/@@download/ENCFF499LPH.bam GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF312WAT bam alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OQY, ENCFF643CGH 967402004 ENCODE Processing Pipeline e4dd2b93c6736a3531452e41212be774 https://www.encodeproject.org/files/ENCFF312WAT/@@download/ENCFF312WAT.bam GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF687USK bam alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQQ, ENCFF807MUK 486550060 ENCODE Processing Pipeline 10281da4c32c6e3735e28af0892f1c97 https://www.encodeproject.org/files/ENCFF687USK/@@download/ENCFF687USK.bam hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF030BIT bam unfiltered alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQQ, ENCFF807MUK 1060472091 ENCODE Processing Pipeline 4e500d8965896a94dfc00c371b2b505a https://www.encodeproject.org/files/ENCFF030BIT/@@download/ENCFF030BIT.bam hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF238DIG bam unfiltered alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OQY, ENCFF807MUK 1886845668 ENCODE Processing Pipeline 90891b56d965de5b0120a46afb0de4fc https://www.encodeproject.org/files/ENCFF238DIG/@@download/ENCFF238DIG.bam hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF945BSS bam alignments ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OQY, ENCFF807MUK 967927877 ENCODE Processing Pipeline ef80bd1a05a9a95a49b27070fa22f3af https://www.encodeproject.org/files/ENCFF945BSS/@@download/ENCFF945BSS.bam hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF181CFO bigWig signal p-value ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF687USK 415710430 ENCODE Processing Pipeline 83e8afbbc7c4375ac0d4043d5d966d97 https://www.encodeproject.org/files/ENCFF181CFO/@@download/ENCFF181CFO.bigWig hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF013QEP bigWig signal p-value ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF945BSS 465556621 ENCODE Processing Pipeline 26baa9df7e6bba5a5b04cbe6ab2105de https://www.encodeproject.org/files/ENCFF013QEP/@@download/ENCFF013QEP.bigWig hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF177YUZ bigWig signal p-value ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF687USK, ENCFF945BSS 550270337 ENCODE Processing Pipeline 47a93bfa513b2ab3d179e5f15c253670 https://www.encodeproject.org/files/ENCFF177YUZ/@@download/ENCFF177YUZ.bigWig hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF784OAK bigWig fold change over control ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF945BSS 423302789 ENCODE Processing Pipeline 7537673f6a52515d1a1eb36e4b66520d https://www.encodeproject.org/files/ENCFF784OAK/@@download/ENCFF784OAK.bigWig hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF719OMW bed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF945BSS 4757155 ENCODE Processing Pipeline b51e7e533d188036b29c628c6add1273 https://www.encodeproject.org/files/ENCFF719OMW/@@download/ENCFF719OMW.bed.gz hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF709QBZ bigBed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF935KIG 7137784 ENCODE Processing Pipeline 1e98223cd88dd6deeb7f4dcaa6c3ab6d https://www.encodeproject.org/files/ENCFF709QBZ/@@download/ENCFF709QBZ.bigBed hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF079OMB bigBed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF719OMW 11172763 ENCODE Processing Pipeline 17ef8675c6d5b55339e5ba1278286b77 https://www.encodeproject.org/files/ENCFF079OMB/@@download/ENCFF079OMB.bigBed hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF471LQJ bigWig fold change over control ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF687USK 221067640 ENCODE Processing Pipeline 32127c8fabf09d17afb4f29e588e658b https://www.encodeproject.org/files/ENCFF471LQJ/@@download/ENCFF471LQJ.bigWig hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF343IHX bigBed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF116MTZ 11280686 ENCODE Processing Pipeline da4cf18486114e33d3dcbd33e18d1259 https://www.encodeproject.org/files/ENCFF343IHX/@@download/ENCFF343IHX.bigBed hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF403AAG bed narrowPeak conservative idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF116MTZ, ENCFF719OMW, ENCFF935KIG 242921 ENCODE Processing Pipeline d4e5d7a3b52f4bb25bdf4e56517071ea https://www.encodeproject.org/files/ENCFF403AAG/@@download/ENCFF403AAG.bed.gz hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF829IMO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF453HPD 483617 ENCODE Processing Pipeline 94f55b2cd2f97e107680f86e4adb6bbb https://www.encodeproject.org/files/ENCFF829IMO/@@download/ENCFF829IMO.bigBed hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF507XFK bigWig fold change over control ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF687USK, ENCFF945BSS 553808134 ENCODE Processing Pipeline 8e01093b9a0e950aadd4f79389f792b1 https://www.encodeproject.org/files/ENCFF507XFK/@@download/ENCFF507XFK.bigWig hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF935KIG bed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF687USK 3407756 ENCODE Processing Pipeline 7b58f1bde9908c70d4575c07b2ce1c31 https://www.encodeproject.org/files/ENCFF935KIG/@@download/ENCFF935KIG.bed.gz hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF674UCZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF403AAG 438897 ENCODE Processing Pipeline 6ba04bfac4c30d7b5c1f01cd4499214d https://www.encodeproject.org/files/ENCFF674UCZ/@@download/ENCFF674UCZ.bigBed hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF041JYX bigWig signal p-value ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF312WAT, ENCFF696GNV, ENCFF948LKH 547791721 ENCODE Processing Pipeline a796b95feef5b47fd5854624fd81f89c https://www.encodeproject.org/files/ENCFF041JYX/@@download/ENCFF041JYX.bigWig GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF116MTZ bed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF356DXM, ENCFF687USK, ENCFF945BSS 4932875 ENCODE Processing Pipeline b411b07bef0274011c869e7b9d6f4c40 https://www.encodeproject.org/files/ENCFF116MTZ/@@download/ENCFF116MTZ.bed.gz hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF453HPD bed narrowPeak optimal idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF116MTZ, ENCFF719OMW, ENCFF935KIG 278409 ENCODE Processing Pipeline 07f8d6d12ffe4b5d81a0bfda84ea298d https://www.encodeproject.org/files/ENCFF453HPD/@@download/ENCFF453HPD.bed.gz hg19 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF079JVI bigWig signal p-value ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF696GNV, ENCFF948LKH 362872066 ENCODE Processing Pipeline 7588e77cc7db5e5314d5f83a3a9d68f8 https://www.encodeproject.org/files/ENCFF079JVI/@@download/ENCFF079JVI.bigWig GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF533SBV bigWig fold change over control ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF312WAT, ENCFF948LKH 423683420 ENCODE Processing Pipeline 68aac309cc2f9ba4baea9cac8704438f https://www.encodeproject.org/files/ENCFF533SBV/@@download/ENCFF533SBV.bigWig GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF052RUP bigWig signal p-value ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF312WAT, ENCFF948LKH 490504822 ENCODE Processing Pipeline 30e51c3a067d67c110cfc848e5109af1 https://www.encodeproject.org/files/ENCFF052RUP/@@download/ENCFF052RUP.bigWig GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF648WCI bigWig fold change over control ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF312WAT, ENCFF696GNV, ENCFF948LKH 552467528 ENCODE Processing Pipeline 47df9572f951d054b33972eb4e3864f3 https://www.encodeproject.org/files/ENCFF648WCI/@@download/ENCFF648WCI.bigWig GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF833NSS bigWig fold change over control ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF696GNV, ENCFF948LKH 220753799 ENCODE Processing Pipeline 97334d3a125b7ab183a43d9aeecb9c21 https://www.encodeproject.org/files/ENCFF833NSS/@@download/ENCFF833NSS.bigWig GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF115EHO bigBed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF876VJF 7138811 ENCODE Processing Pipeline 2a9531f444600940c765e5a532ac7d52 https://www.encodeproject.org/files/ENCFF115EHO/@@download/ENCFF115EHO.bigBed GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF672TPZ bigBed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF147SHY 11179617 ENCODE Processing Pipeline 4dcea489bbd03069cc99264d48fe3e2c https://www.encodeproject.org/files/ENCFF672TPZ/@@download/ENCFF672TPZ.bigBed GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF147SHY bed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF312WAT, ENCFF948LKH 4756156 ENCODE Processing Pipeline 5f726a422daeef97956cccd58a3236de https://www.encodeproject.org/files/ENCFF147SHY/@@download/ENCFF147SHY.bed.gz GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF876VJF bed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF696GNV, ENCFF948LKH 3400221 ENCODE Processing Pipeline 0ed143eb8b5fd8d3c570c6c65d3e94e1 https://www.encodeproject.org/files/ENCFF876VJF/@@download/ENCFF876VJF.bed.gz GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF238RWM bed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF312WAT, ENCFF696GNV, ENCFF948LKH 4939003 ENCODE Processing Pipeline 8b9380257bdd6f17d0b02854fe876145 https://www.encodeproject.org/files/ENCFF238RWM/@@download/ENCFF238RWM.bed.gz GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF690IGM bed narrowPeak conservative idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF147SHY, ENCFF238RWM, ENCFF419RSJ, ENCFF876VJF 244589 ENCODE Processing Pipeline 799b50271b9b81eeb4818ca865efc167 https://www.encodeproject.org/files/ENCFF690IGM/@@download/ENCFF690IGM.bed.gz GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF471AXO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF690IGM 441707 ENCODE Processing Pipeline cf79da6290ce765222181af517e6fb65 https://www.encodeproject.org/files/ENCFF471AXO/@@download/ENCFF471AXO.bigBed GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF272RWB bigBed narrowPeak peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF238RWM 11293100 ENCODE Processing Pipeline af20c801a4bf8a9b91f3d2c298df50a2 https://www.encodeproject.org/files/ENCFF272RWB/@@download/ENCFF272RWB.bigBed GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF403CAJ bed narrowPeak optimal idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF147SHY, ENCFF238RWM, ENCFF419RSJ, ENCFF876VJF 280001 ENCODE Processing Pipeline 9f84b13c5eb67b5b9b2abc6d136f1972 https://www.encodeproject.org/files/ENCFF403CAJ/@@download/ENCFF403CAJ.bed.gz GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF496HZT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHM ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF403CAJ 486189 ENCODE Processing Pipeline b8ccb8e9ef7aa5f5a4c76a0628f21891 https://www.encodeproject.org/files/ENCFF496HZT/@@download/ENCFF496HZT.bigBed GRCh38 released low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000MYZ bam alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000MZH 960247009 Richard Myers, HAIB 554252b5bb32682d4cfbb80bc1f7dd50 https://www.encodeproject.org/files/ENCFF000MYZ/@@download/ENCFF000MYZ.bam hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000MZA bigBed broadPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TSB 355600 Richard Myers, HAIB 00aeef2a3c55b6dbe82f88be52b41a9f https://www.encodeproject.org/files/ENCFF000MZA/@@download/ENCFF000MZA.bigBed hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000MZB bigBed broadPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TSC 156380 Richard Myers, HAIB 4d88118bfd4e3783824a0f2390d5eaa3 https://www.encodeproject.org/files/ENCFF000MZB/@@download/ENCFF000MZB.bigBed hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000MZC bam alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000MZO 1726125712 Richard Myers, HAIB c6aa012e30eb5e56c754e62bb3edf937 https://www.encodeproject.org/files/ENCFF000MZC/@@download/ENCFF000MZC.bam hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000MZD bigWig raw signal ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 1 10046636 Richard Myers, HAIB 269ecc2fb517c13452281ef055412184 https://www.encodeproject.org/files/ENCFF000MZD/@@download/ENCFF000MZD.bigWig hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000MZE bigWig raw signal ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 1 8250518 Richard Myers, HAIB 47567cf1bf8ec0913647c3636707c150 https://www.encodeproject.org/files/ENCFF000MZE/@@download/ENCFF000MZE.bigWig hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000MZH fastq reads ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 938423847 Richard Myers, HAIB 712277c9c6650d4edc8100f503d29d14 https://www.encodeproject.org/files/ENCFF000MZH/@@download/ENCFF000MZH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000MZO fastq reads ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1674741967 Richard Myers, HAIB 944eca5ec69d8bbb749b53cb68569df6 https://www.encodeproject.org/files/ENCFF000MZO/@@download/ENCFF000MZO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF001TSB bed broadPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 1 189496 Richard Myers, HAIB 74b763804b53066fee7b6c67a0ff33b6 https://www.encodeproject.org/files/ENCFF001TSB/@@download/ENCFF001TSB.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TSC bed broadPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 1 68477 Richard Myers, HAIB a32afcb27505c126ef8f5b3e002cea90 https://www.encodeproject.org/files/ENCFF001TSC/@@download/ENCFF001TSC.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CFM bed narrowPeak optimal idr thresholded peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 129154 ENCODE Consortium Analysis Working Group f524690b4c0d59f8495f5b18cd0757dc https://www.encodeproject.org/files/ENCFF002CFM/@@download/ENCFF002CFM.bed.gz hg19 archived borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF126YVP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE ENCFF002CFM 391705 ENCODE Consortium 55aecbe5195bc423e9cadb7c49144973 https://www.encodeproject.org/files/ENCFF126YVP/@@download/ENCFF126YVP.bigBed hg19 archived borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF714CRL bam alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZH, ENCFF643CGH 636745391 ENCODE Processing Pipeline 9b65b00f514227d3fc9fa9c912452220 https://www.encodeproject.org/files/ENCFF714CRL/@@download/ENCFF714CRL.bam GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF917SFY bam unfiltered alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZH, ENCFF643CGH 1035670609 ENCODE Processing Pipeline d0dff5037d8054d20551e48a70c1f479 https://www.encodeproject.org/files/ENCFF917SFY/@@download/ENCFF917SFY.bam GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF193VBZ bam unfiltered alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZO, ENCFF643CGH 1887869517 ENCODE Processing Pipeline 23e284edf89389b0a444eee9dcc5b3d2 https://www.encodeproject.org/files/ENCFF193VBZ/@@download/ENCFF193VBZ.bam GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF824KPX bam alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZO, ENCFF643CGH 1268818315 ENCODE Processing Pipeline 48b146746f1b99b08e465e55fedca68b https://www.encodeproject.org/files/ENCFF824KPX/@@download/ENCFF824KPX.bam GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF455WGF bam alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZH, ENCFF807MUK 636894057 ENCODE Processing Pipeline a06472a41f84678a897c6da0be6d6e44 https://www.encodeproject.org/files/ENCFF455WGF/@@download/ENCFF455WGF.bam hg19 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF935IYT bam unfiltered alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZH, ENCFF807MUK 1032678229 ENCODE Processing Pipeline 408cf84d99e165a5d85436742c16b0f7 https://www.encodeproject.org/files/ENCFF935IYT/@@download/ENCFF935IYT.bam hg19 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF118HVH bam unfiltered alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZO, ENCFF807MUK 1882238530 ENCODE Processing Pipeline fa10dbeb0c9b38eefb4189c4142961fb https://www.encodeproject.org/files/ENCFF118HVH/@@download/ENCFF118HVH.bam hg19 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF866ZRH bam alignments ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZO, ENCFF807MUK 1268802984 ENCODE Processing Pipeline 051d61181186466547f7341edb38ead6 https://www.encodeproject.org/files/ENCFF866ZRH/@@download/ENCFF866ZRH.bam hg19 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF181CWU bigWig signal p-value ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF714CRL 623901937 ENCODE Processing Pipeline 15a1cd6acbb54e40575d441d7cf0e51d https://www.encodeproject.org/files/ENCFF181CWU/@@download/ENCFF181CWU.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF717HDI bigWig signal p-value ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF824KPX 796747885 ENCODE Processing Pipeline 22129856aec26063a94af43dcf30ad64 https://www.encodeproject.org/files/ENCFF717HDI/@@download/ENCFF717HDI.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF382IVN bigWig signal p-value ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF656HEF, ENCFF714CRL, ENCFF824KPX 852190104 ENCODE Processing Pipeline 364df81ddb0a18dc5aead566bd919d86 https://www.encodeproject.org/files/ENCFF382IVN/@@download/ENCFF382IVN.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF241TGN bigWig fold change over control ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF714CRL 412039047 ENCODE Processing Pipeline badb010769c7f1e3ec56b90a536d31cc https://www.encodeproject.org/files/ENCFF241TGN/@@download/ENCFF241TGN.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF352EUP bigWig fold change over control ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF824KPX 614387922 ENCODE Processing Pipeline 96a47ef41cd70662239e7692fc1e40b4 https://www.encodeproject.org/files/ENCFF352EUP/@@download/ENCFF352EUP.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF509OEY bigWig fold change over control ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF656HEF, ENCFF714CRL, ENCFF824KPX 875074764 ENCODE Processing Pipeline 47111215095a48fb323cf3fb6080a3b9 https://www.encodeproject.org/files/ENCFF509OEY/@@download/ENCFF509OEY.bigWig GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF556YJA bigBed narrowPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF483ZNQ 13168586 ENCODE Processing Pipeline b16a7b5bbb840bf7cc6c421ed89443f3 https://www.encodeproject.org/files/ENCFF556YJA/@@download/ENCFF556YJA.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF185GGF bed narrowPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF714CRL 6006918 ENCODE Processing Pipeline 68c01ecaac1f1da2a9033fc8ab85f2de https://www.encodeproject.org/files/ENCFF185GGF/@@download/ENCFF185GGF.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF589YJD bigBed narrowPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF185GGF 13004978 ENCODE Processing Pipeline c5fa7c291f66181f3800d3a857a71aca https://www.encodeproject.org/files/ENCFF589YJD/@@download/ENCFF589YJD.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF483ZNQ bed narrowPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF824KPX 6140924 ENCODE Processing Pipeline 8600cc7ee98d0b930bd0900c76d1ed4c https://www.encodeproject.org/files/ENCFF483ZNQ/@@download/ENCFF483ZNQ.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF829JIE bed narrowPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF656HEF, ENCFF714CRL, ENCFF824KPX 6850961 ENCODE Processing Pipeline 2bf2b868fd355915a5144025fda54496 https://www.encodeproject.org/files/ENCFF829JIE/@@download/ENCFF829JIE.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF500LMX bed narrowPeak conservative idr thresholded peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF185GGF, ENCFF419RSJ, ENCFF483ZNQ, ENCFF829JIE 142392 ENCODE Processing Pipeline 50043ebba63dae1f9b1fffa6bf358d67 https://www.encodeproject.org/files/ENCFF500LMX/@@download/ENCFF500LMX.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF493CDG bigBed narrowPeak peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF829JIE 13068445 ENCODE Processing Pipeline 1a9b16f1a57a3882a6962436a3b90154 https://www.encodeproject.org/files/ENCFF493CDG/@@download/ENCFF493CDG.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF048WEZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF896WFR 432309 ENCODE Processing Pipeline e2d62a4def88d89825594a86989cfa7f https://www.encodeproject.org/files/ENCFF048WEZ/@@download/ENCFF048WEZ.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF681ECC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF500LMX 373335 ENCODE Processing Pipeline 8b2db5ee95b035bb4b8d346a380af089 https://www.encodeproject.org/files/ENCFF681ECC/@@download/ENCFF681ECC.bigBed GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF896WFR bed narrowPeak optimal idr thresholded peaks ENCSR000BPU ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ETS1-human ENCAB000AGG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF185GGF, ENCFF419RSJ, ENCFF483ZNQ, ENCFF829JIE 176167 ENCODE Processing Pipeline 218a556fe2ef580fd10bc03726ab429f https://www.encodeproject.org/files/ENCFF896WFR/@@download/ENCFF896WFR.bed.gz GRCh38 released borderline replicate concordance, low read length, low read depth biological replicates with identical biosample ENCFF000PUV bam alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PVB 457444515 Richard Myers, HAIB 208f64908dd7b6b732ea82d15a1b8cb2 https://www.encodeproject.org/files/ENCFF000PUV/@@download/ENCFF000PUV.bam hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PUW bam alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PVD 641824940 Richard Myers, HAIB e4ac980f84b9f633de49b5cfd9007b13 https://www.encodeproject.org/files/ENCFF000PUW/@@download/ENCFF000PUW.bam hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PUX bigBed broadPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UIS 956513 Richard Myers, HAIB be80a88c22313653c1805ac5428a74a4 https://www.encodeproject.org/files/ENCFF000PUX/@@download/ENCFF000PUX.bigBed hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PUY bigBed broadPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UIT 1030276 Richard Myers, HAIB 0f745d3a40ad208fea476f5c3c5b1b2a https://www.encodeproject.org/files/ENCFF000PUY/@@download/ENCFF000PUY.bigBed hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PUZ bigWig raw signal ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 20849392 Richard Myers, HAIB 53b1ac7b7636d39f6ce9acf21d99d353 https://www.encodeproject.org/files/ENCFF000PUZ/@@download/ENCFF000PUZ.bigWig hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PVA bigWig raw signal ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 24670133 Richard Myers, HAIB 8051878bab8209dc6dfe2d3288f968e4 https://www.encodeproject.org/files/ENCFF000PVA/@@download/ENCFF000PVA.bigWig hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PVB fastq reads ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 466935464 Richard Myers, HAIB 266df8d25aa4ef5c5ff14f3787c05be6 https://www.encodeproject.org/files/ENCFF000PVB/@@download/ENCFF000PVB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PVT/ released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PVD fastq reads ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 604205721 Richard Myers, HAIB 1ef1852672f7a561f7cc886b35842755 https://www.encodeproject.org/files/ENCFF000PVD/@@download/ENCFF000PVD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PVT/ released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UIS bed broadPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 1 551604 Richard Myers, HAIB 4ca36eff437ba529a98491c43e6891ef https://www.encodeproject.org/files/ENCFF001UIS/@@download/ENCFF001UIS.bed.gz hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UIT bed broadPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 1 539681 Richard Myers, HAIB dae6120f5cbf78a6950ed1cce93f8e1b https://www.encodeproject.org/files/ENCFF001UIT/@@download/ENCFF001UIT.bed.gz hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CLL bed narrowPeak optimal idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 627799 ENCODE Consortium Analysis Working Group 7e637039254599be3cfce759110c8d8d https://www.encodeproject.org/files/ENCFF002CLL/@@download/ENCFF002CLL.bed.gz hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF992SUO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE ENCFF002CLL 1194510 ENCODE Consortium 483eac89f985b21f1f361c9ece46a539 https://www.encodeproject.org/files/ENCFF992SUO/@@download/ENCFF992SUO.bigBed hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF022RML bam alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PVB, ENCFF643CGH 206418052 ENCODE Processing Pipeline 36cde1749a1c0cdff774d270c8b8c89d https://www.encodeproject.org/files/ENCFF022RML/@@download/ENCFF022RML.bam GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF930MZF bam unfiltered alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PVB, ENCFF643CGH 539936928 ENCODE Processing Pipeline 307d0cd6539d2b46951c31c8748c0f82 https://www.encodeproject.org/files/ENCFF930MZF/@@download/ENCFF930MZF.bam GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF500PRD bam unfiltered alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PVD, ENCFF643CGH 768563185 ENCODE Processing Pipeline 138941c321ceac57c32de344c53cd50f https://www.encodeproject.org/files/ENCFF500PRD/@@download/ENCFF500PRD.bam GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF727LFV bam alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PVD, ENCFF643CGH 497226916 ENCODE Processing Pipeline 903aa9ce2ae4af77e3b132ef5fbe72ac https://www.encodeproject.org/files/ENCFF727LFV/@@download/ENCFF727LFV.bam GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF564BIO bam unfiltered alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PVD, ENCFF807MUK 767769587 ENCODE Processing Pipeline e0089906ebf19cb80def176d414acb20 https://www.encodeproject.org/files/ENCFF564BIO/@@download/ENCFF564BIO.bam hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF711WGT bam unfiltered alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PVB, ENCFF807MUK 539453496 ENCODE Processing Pipeline 274b1974621d2fba1ea428908b181fe3 https://www.encodeproject.org/files/ENCFF711WGT/@@download/ENCFF711WGT.bam hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF025EMH bam alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PVB, ENCFF807MUK 206443628 ENCODE Processing Pipeline 782b319c313a9ae697122ebed824be32 https://www.encodeproject.org/files/ENCFF025EMH/@@download/ENCFF025EMH.bam hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF744BNI bam alignments ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PVD, ENCFF807MUK 497302690 ENCODE Processing Pipeline 98014e5564d7c0a04b9758d445ac079d https://www.encodeproject.org/files/ENCFF744BNI/@@download/ENCFF744BNI.bam hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF485OIB bigWig signal p-value ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF025EMH, ENCFF234MAA 263466841 ENCODE Processing Pipeline 2bd0c7849f08749a7b46302325cb7581 https://www.encodeproject.org/files/ENCFF485OIB/@@download/ENCFF485OIB.bigWig hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF003WNJ bed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF025EMH, ENCFF234MAA 3377687 ENCODE Processing Pipeline d4b06404255adc7ffb5c2ff268b7bf7d https://www.encodeproject.org/files/ENCFF003WNJ/@@download/ENCFF003WNJ.bed.gz hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF383PTC bigBed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF129JER 12081117 ENCODE Processing Pipeline 18d61c6bf289288ffdd9620beccd493d https://www.encodeproject.org/files/ENCFF383PTC/@@download/ENCFF383PTC.bigBed hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF423WPT bed narrowPeak optimal idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF003WNJ, ENCFF129JER, ENCFF821DBG 694495 ENCODE Processing Pipeline 85ab5f98abfeec0e40ef95c94ad9bf20 https://www.encodeproject.org/files/ENCFF423WPT/@@download/ENCFF423WPT.bed.gz hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF703LGX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF423WPT 1281680 ENCODE Processing Pipeline c4cb757b1cef4652c052569362f5e487 https://www.encodeproject.org/files/ENCFF703LGX/@@download/ENCFF703LGX.bigBed hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF129JER bed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234MAA, ENCFF744BNI 5459312 ENCODE Processing Pipeline 2862010fb32255d45088e7fc2a69a287 https://www.encodeproject.org/files/ENCFF129JER/@@download/ENCFF129JER.bed.gz hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF821DBG bed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF025EMH, ENCFF234MAA, ENCFF744BNI 6090132 ENCODE Processing Pipeline e6f34b8af35ec6a068f5e1f21e0f81e6 https://www.encodeproject.org/files/ENCFF821DBG/@@download/ENCFF821DBG.bed.gz hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF305LMG bigBed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF821DBG 12255975 ENCODE Processing Pipeline d6b80226b0b6f649124293ae7f738a77 https://www.encodeproject.org/files/ENCFF305LMG/@@download/ENCFF305LMG.bigBed hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF429JRY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF347JZD 1026660 ENCODE Processing Pipeline 711cc64fc3e14c97c013533160dc03bc https://www.encodeproject.org/files/ENCFF429JRY/@@download/ENCFF429JRY.bigBed hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF469OUV bigWig fold change over control ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234MAA, ENCFF744BNI 201837788 ENCODE Processing Pipeline d2d12a2c748fcfc79d6c425df68f224d https://www.encodeproject.org/files/ENCFF469OUV/@@download/ENCFF469OUV.bigWig hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF730VAQ bigWig fold change over control ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF025EMH, ENCFF234MAA 101304839 ENCODE Processing Pipeline 0f81e90b1b76a4d3c6d0a7dee9c275b1 https://www.encodeproject.org/files/ENCFF730VAQ/@@download/ENCFF730VAQ.bigWig hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF204ULN bigWig signal p-value ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234MAA, ENCFF744BNI 320052518 ENCODE Processing Pipeline aa2ff47bd27f34292b310c026f0d8c58 https://www.encodeproject.org/files/ENCFF204ULN/@@download/ENCFF204ULN.bigWig hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF784GQS bigWig signal p-value ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF025EMH, ENCFF234MAA, ENCFF744BNI 314841599 ENCODE Processing Pipeline 48d898dfea26a01ffad911faeeb8388a https://www.encodeproject.org/files/ENCFF784GQS/@@download/ENCFF784GQS.bigWig hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF878OMZ bigWig fold change over control ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF025EMH, ENCFF234MAA, ENCFF744BNI 268461408 ENCODE Processing Pipeline 45cf835768e7844137c70f8729ffc161 https://www.encodeproject.org/files/ENCFF878OMZ/@@download/ENCFF878OMZ.bigWig hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF060BYY bigBed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF003WNJ 7764379 ENCODE Processing Pipeline 6a50cf04ed55793e834b955f55c80cf3 https://www.encodeproject.org/files/ENCFF060BYY/@@download/ENCFF060BYY.bigBed hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF347JZD bed narrowPeak conservative idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF003WNJ, ENCFF129JER, ENCFF821DBG 514377 ENCODE Processing Pipeline 9275ecae47399600f0565ab4779dab90 https://www.encodeproject.org/files/ENCFF347JZD/@@download/ENCFF347JZD.bed.gz hg19 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF435TFP bigWig signal p-value ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF166HHP, ENCFF727LFV 312170761 ENCODE Processing Pipeline 2900fe7c01bd216fa2480cc9697b57ad https://www.encodeproject.org/files/ENCFF435TFP/@@download/ENCFF435TFP.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF638UUJ bigWig signal p-value ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF022RML, ENCFF166HHP, ENCFF727LFV 315412961 ENCODE Processing Pipeline 9977494c1dfeacb2defe114dde538677 https://www.encodeproject.org/files/ENCFF638UUJ/@@download/ENCFF638UUJ.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF402PZJ bigBed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF777TLS 12434380 ENCODE Processing Pipeline 006672ef45168a4e2ba12c98a4b3a06d https://www.encodeproject.org/files/ENCFF402PZJ/@@download/ENCFF402PZJ.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF929SUN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF560WFS 1319197 ENCODE Processing Pipeline 26b12f371f6d7630d10f90bdd970a985 https://www.encodeproject.org/files/ENCFF929SUN/@@download/ENCFF929SUN.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF351KKK bed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF166HHP, ENCFF727LFV 5458874 ENCODE Processing Pipeline d3a3d45aefb777e9159e44f9e452f449 https://www.encodeproject.org/files/ENCFF351KKK/@@download/ENCFF351KKK.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF509LBE bed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF022RML, ENCFF166HHP 3744818 ENCODE Processing Pipeline 11ea90a06f989a0be7de0626603f0c3b https://www.encodeproject.org/files/ENCFF509LBE/@@download/ENCFF509LBE.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF560WFS bed narrowPeak optimal idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF351KKK, ENCFF419RSJ, ENCFF509LBE, ENCFF777TLS 715237 ENCODE Processing Pipeline bc7aef87920ca24d27c11889dfb66f7f https://www.encodeproject.org/files/ENCFF560WFS/@@download/ENCFF560WFS.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF644YVA bigWig fold change over control ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF166HHP, ENCFF727LFV 200024533 ENCODE Processing Pipeline f08aa2ee6d44be7a012c643746ae32eb https://www.encodeproject.org/files/ENCFF644YVA/@@download/ENCFF644YVA.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF188RNP bigBed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF351KKK 12084756 ENCODE Processing Pipeline 6b8a7540fb1a4f5b223631ea1c9316a2 https://www.encodeproject.org/files/ENCFF188RNP/@@download/ENCFF188RNP.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF580EKJ bigBed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF509LBE 8280792 ENCODE Processing Pipeline 251c2ceef103c9cf4c042cea9cb0522e https://www.encodeproject.org/files/ENCFF580EKJ/@@download/ENCFF580EKJ.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF039YPW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF766ZRX 1039456 ENCODE Processing Pipeline f40144b94c6bd2016efabad47256ea6a https://www.encodeproject.org/files/ENCFF039YPW/@@download/ENCFF039YPW.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF757XBB bigWig signal p-value ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF022RML, ENCFF166HHP 227486867 ENCODE Processing Pipeline 3fda2853f95395182809bef071beca81 https://www.encodeproject.org/files/ENCFF757XBB/@@download/ENCFF757XBB.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF609KNN bigWig fold change over control ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF022RML, ENCFF166HHP 100653779 ENCODE Processing Pipeline 0fabdf79187fff1e31cf9c9121fea9f7 https://www.encodeproject.org/files/ENCFF609KNN/@@download/ENCFF609KNN.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF074TFD bigWig fold change over control ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF022RML, ENCFF166HHP, ENCFF727LFV 270958781 ENCODE Processing Pipeline 3336497bb83304203aa6dc7b327ed0d0 https://www.encodeproject.org/files/ENCFF074TFD/@@download/ENCFF074TFD.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF777TLS bed narrowPeak peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF022RML, ENCFF166HHP, ENCFF727LFV 6233155 ENCODE Processing Pipeline 03bfc7583a44fd9d5a0fe735c2a0815a https://www.encodeproject.org/files/ENCFF777TLS/@@download/ENCFF777TLS.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF766ZRX bed narrowPeak conservative idr thresholded peaks ENCSR000BQC ChIP-seq CL:0002618 endothelial cell of umbilical vein primary cell newborn unknown unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF351KKK, ENCFF419RSJ, ENCFF509LBE, ENCFF777TLS 521693 ENCODE Processing Pipeline 772b45610c883ead1173c7f7ec0c624d https://www.encodeproject.org/files/ENCFF766ZRX/@@download/ENCFF766ZRX.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OOY bam alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OPK 1019440109 Richard Myers, HAIB e6450c1a8e8df7c22572e8b4aa5b3c64 https://www.encodeproject.org/files/ENCFF000OOY/@@download/ENCFF000OOY.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OOZ bigBed broadPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBK 120035 Richard Myers, HAIB 6625b2cb5dbd70bb41f55ce07cef7b9b https://www.encodeproject.org/files/ENCFF000OOZ/@@download/ENCFF000OOZ.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OPA bigBed broadPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBL 267344 Richard Myers, HAIB e0bf66330732e51f93b87110f89457ea https://www.encodeproject.org/files/ENCFF000OPA/@@download/ENCFF000OPA.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OPB bam alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OPL 1132473118 Richard Myers, HAIB d5abf8e7aa1517536951bc04e9502e81 https://www.encodeproject.org/files/ENCFF000OPB/@@download/ENCFF000OPB.bam hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OPD bigWig raw signal ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 6693240 Richard Myers, HAIB 1bfcc9a1b10b3096804c063797a0e0f3 https://www.encodeproject.org/files/ENCFF000OPD/@@download/ENCFF000OPD.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OPE bigWig raw signal ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 15104339 Richard Myers, HAIB 13346e979315718a669ac39ad848d93b https://www.encodeproject.org/files/ENCFF000OPE/@@download/ENCFF000OPE.bigWig hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OPK fastq reads ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1000956349 Richard Myers, HAIB 1ec9aa57cbe7fbe0ed60399afce08e5d https://www.encodeproject.org/files/ENCFF000OPK/@@download/ENCFF000OPK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OPL fastq reads ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1109176398 Richard Myers, HAIB 02a5a385fc77713f9ccdad60f365e36e https://www.encodeproject.org/files/ENCFF000OPL/@@download/ENCFF000OPL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UBK bed broadPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 48091 Richard Myers, HAIB 823770a53c6b9e8c4c2acedb820f438c https://www.encodeproject.org/files/ENCFF001UBK/@@download/ENCFF001UBK.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UBL bed broadPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 143281 Richard Myers, HAIB aa6cc85ac72e856bed322c1956f7bc74 https://www.encodeproject.org/files/ENCFF001UBL/@@download/ENCFF001UBL.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CIY bed narrowPeak optimal idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 108431 ENCODE Consortium Analysis Working Group 80752ae1c5310b02450b06c83f3df628 https://www.encodeproject.org/files/ENCFF002CIY/@@download/ENCFF002CIY.bed.gz hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF290XYE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE ENCFF002CIY 228049 ENCODE Consortium 827ceb8290839cddf41f61255b9a9c2b https://www.encodeproject.org/files/ENCFF290XYE/@@download/ENCFF290XYE.bigBed hg19 archived moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF716SQR bam unfiltered alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPK, ENCFF643CGH 1250057845 ENCODE Processing Pipeline 935a00fa63b92f834b76ee5e73ccc581 https://www.encodeproject.org/files/ENCFF716SQR/@@download/ENCFF716SQR.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF397UQW bam alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPK, ENCFF643CGH 718958398 ENCODE Processing Pipeline d5b6a187a80d622b37b18d49cbc103ae https://www.encodeproject.org/files/ENCFF397UQW/@@download/ENCFF397UQW.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF146IPZ bam unfiltered alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPL, ENCFF643CGH 1444167646 ENCODE Processing Pipeline d1904578dfeb401b113b2f0164b149cf https://www.encodeproject.org/files/ENCFF146IPZ/@@download/ENCFF146IPZ.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF218SMD bam alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPL, ENCFF643CGH 748855066 ENCODE Processing Pipeline ac0adc8edfe4346cd349022e03bd0872 https://www.encodeproject.org/files/ENCFF218SMD/@@download/ENCFF218SMD.bam GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF179VVI bam unfiltered alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPK, ENCFF807MUK 1246109595 ENCODE Processing Pipeline cfbbbb9a08650df0b90c1a3eebb6b01e https://www.encodeproject.org/files/ENCFF179VVI/@@download/ENCFF179VVI.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF101PTT bam alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OPK, ENCFF807MUK 719364958 ENCODE Processing Pipeline b522e490470e5d2e87d6c17b48f94fc2 https://www.encodeproject.org/files/ENCFF101PTT/@@download/ENCFF101PTT.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF499JJE bam unfiltered alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPL, ENCFF807MUK 1438539291 ENCODE Processing Pipeline 11cf0a05b8cc1f77907d31ce32fbb5b9 https://www.encodeproject.org/files/ENCFF499JJE/@@download/ENCFF499JJE.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF697QYW bam alignments ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OPL, ENCFF807MUK 749221691 ENCODE Processing Pipeline 1da3def2751f989482a9935df59c18bf https://www.encodeproject.org/files/ENCFF697QYW/@@download/ENCFF697QYW.bam hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF514TFF bigWig signal p-value ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF218SMD, ENCFF948LKH 533834428 ENCODE Processing Pipeline 1c39179b8d3b9246a4a0671f52393840 https://www.encodeproject.org/files/ENCFF514TFF/@@download/ENCFF514TFF.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF494DRM bigWig signal p-value ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF218SMD, ENCFF397UQW, ENCFF948LKH 547798489 ENCODE Processing Pipeline 57fa024ce45c0045452013778ea7dfc1 https://www.encodeproject.org/files/ENCFF494DRM/@@download/ENCFF494DRM.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF917QCX bigWig signal p-value ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF397UQW, ENCFF948LKH 454924925 ENCODE Processing Pipeline ba0961718a1fa50c80caa6a85537f8fc https://www.encodeproject.org/files/ENCFF917QCX/@@download/ENCFF917QCX.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF424DKN bigWig fold change over control ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF218SMD, ENCFF948LKH 367068723 ENCODE Processing Pipeline f04786b14180218fce84be6b62ac5579 https://www.encodeproject.org/files/ENCFF424DKN/@@download/ENCFF424DKN.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF593FGQ bigWig fold change over control ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF397UQW, ENCFF948LKH 362426396 ENCODE Processing Pipeline d44047d93efb376e101b10365058f4a5 https://www.encodeproject.org/files/ENCFF593FGQ/@@download/ENCFF593FGQ.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF640QBB bigWig fold change over control ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF218SMD, ENCFF397UQW, ENCFF948LKH 627269531 ENCODE Processing Pipeline 95c05b8bc467e54d8faf4de21069ef44 https://www.encodeproject.org/files/ENCFF640QBB/@@download/ENCFF640QBB.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF616MPS bed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF397UQW, ENCFF948LKH 4190589 ENCODE Processing Pipeline 330062aebaa2f92d56096d10670aee8e https://www.encodeproject.org/files/ENCFF616MPS/@@download/ENCFF616MPS.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF234SOS bed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF218SMD, ENCFF948LKH 4394146 ENCODE Processing Pipeline 9a20ec7068c835f2ef529a9e7ae9ac71 https://www.encodeproject.org/files/ENCFF234SOS/@@download/ENCFF234SOS.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF980JFW bed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF218SMD, ENCFF397UQW, ENCFF948LKH 5392644 ENCODE Processing Pipeline 59fdb12ed9a62f7d35f95643b902769f https://www.encodeproject.org/files/ENCFF980JFW/@@download/ENCFF980JFW.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF154NJK bigBed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF616MPS 10677796 ENCODE Processing Pipeline 3884ef8d97490126c429cfd1ea01467e https://www.encodeproject.org/files/ENCFF154NJK/@@download/ENCFF154NJK.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF566HTZ bigBed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234SOS 10664605 ENCODE Processing Pipeline ee46dc2af8a559f08beb8b7ad066237f https://www.encodeproject.org/files/ENCFF566HTZ/@@download/ENCFF566HTZ.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF183ZNB bed narrowPeak conservative idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234SOS, ENCFF419RSJ, ENCFF616MPS, ENCFF980JFW 118313 ENCODE Processing Pipeline e1968096cc12b692d1bf0565fc39c6ea https://www.encodeproject.org/files/ENCFF183ZNB/@@download/ENCFF183ZNB.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF871WIG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF183ZNB 241752 ENCODE Processing Pipeline 05809a30f3d84e599364ee540820d739 https://www.encodeproject.org/files/ENCFF871WIG/@@download/ENCFF871WIG.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF009IVJ bed narrowPeak optimal idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234SOS, ENCFF419RSJ, ENCFF616MPS, ENCFF980JFW 172087 ENCODE Processing Pipeline d5025509d1d369bfdabc0eb2c82f18f2 https://www.encodeproject.org/files/ENCFF009IVJ/@@download/ENCFF009IVJ.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF346UJQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF009IVJ 314707 ENCODE Processing Pipeline d03aad1bd2b84fa4862845ce5ffb0834 https://www.encodeproject.org/files/ENCFF346UJQ/@@download/ENCFF346UJQ.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF868FHD bigBed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF980JFW 11482123 ENCODE Processing Pipeline 0dac6da996457ae05daf6055a7c96d18 https://www.encodeproject.org/files/ENCFF868FHD/@@download/ENCFF868FHD.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF613PGF bigWig signal p-value ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF101PTT, ENCFF356DXM 462295016 ENCODE Processing Pipeline 9e8136e3351fc37c7d16e8741bca1376 https://www.encodeproject.org/files/ENCFF613PGF/@@download/ENCFF613PGF.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF759OKW bigWig signal p-value ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF697QYW 553018863 ENCODE Processing Pipeline 74bfeb649dbf1c5b694c72c130c20cd5 https://www.encodeproject.org/files/ENCFF759OKW/@@download/ENCFF759OKW.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF536YJT bed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF101PTT, ENCFF356DXM 4194122 ENCODE Processing Pipeline e12b8b3c9acc5a466cbdefcdaa72a1e3 https://www.encodeproject.org/files/ENCFF536YJT/@@download/ENCFF536YJT.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF183DNV bigBed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF273RCZ 11453858 ENCODE Processing Pipeline a036edb8c27f53744940713d6ded2923 https://www.encodeproject.org/files/ENCFF183DNV/@@download/ENCFF183DNV.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF064XVF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF902CVS 328203 ENCODE Processing Pipeline fa64bd4113d2878613e07a0e1beff934 https://www.encodeproject.org/files/ENCFF064XVF/@@download/ENCFF064XVF.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF273RCZ bed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF101PTT, ENCFF356DXM, ENCFF697QYW 5408946 ENCODE Processing Pipeline 6e4ef523a99b68027d44253366648d21 https://www.encodeproject.org/files/ENCFF273RCZ/@@download/ENCFF273RCZ.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF902CVS bed narrowPeak optimal idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF159YRA, ENCFF273RCZ, ENCFF536YJT 183886 ENCODE Processing Pipeline 3f3592fa333e52b9cca1baa9811787c8 https://www.encodeproject.org/files/ENCFF902CVS/@@download/ENCFF902CVS.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF329DBY bigWig fold change over control ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF101PTT, ENCFF356DXM 366282662 ENCODE Processing Pipeline c70dabae07b445c3e70bfbc8dd8f8e45 https://www.encodeproject.org/files/ENCFF329DBY/@@download/ENCFF329DBY.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF159YRA bed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF697QYW 4464087 ENCODE Processing Pipeline 4ecc8bf46ac16b07181bedc3bb3760de https://www.encodeproject.org/files/ENCFF159YRA/@@download/ENCFF159YRA.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF427XSX bigBed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF536YJT 10682832 ENCODE Processing Pipeline f5b2d91328cfabb1560b4afdb994cfba https://www.encodeproject.org/files/ENCFF427XSX/@@download/ENCFF427XSX.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF490HQY bigWig signal p-value ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF101PTT, ENCFF356DXM, ENCFF697QYW 546008905 ENCODE Processing Pipeline ef507c0c754151ef7a8c0f952dbedaaf https://www.encodeproject.org/files/ENCFF490HQY/@@download/ENCFF490HQY.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF254NWT bigWig fold change over control ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF356DXM, ENCFF697QYW 364985934 ENCODE Processing Pipeline 70042ca55379e3e159157eb0bb36ffa9 https://www.encodeproject.org/files/ENCFF254NWT/@@download/ENCFF254NWT.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF361FGQ bigWig fold change over control ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF101PTT, ENCFF356DXM, ENCFF697QYW 639085236 ENCODE Processing Pipeline 6d94f488eb25da729841a2702edc3f04 https://www.encodeproject.org/files/ENCFF361FGQ/@@download/ENCFF361FGQ.bigWig hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF710ZZY bigBed narrowPeak peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF159YRA 10742075 ENCODE Processing Pipeline e97d13c8a8daf550485616de7b10c27c https://www.encodeproject.org/files/ENCFF710ZZY/@@download/ENCFF710ZZY.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF454ADD bed narrowPeak conservative idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF159YRA, ENCFF273RCZ, ENCFF536YJT 124344 ENCODE Processing Pipeline 7804a5fff9d5ebdfd03171f9d141bb4b https://www.encodeproject.org/files/ENCFF454ADD/@@download/ENCFF454ADD.bed.gz hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF259QVQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF454ADD 248213 ENCODE Processing Pipeline 2bdfae7282117cfe45e4ee51980befad https://www.encodeproject.org/files/ENCFF259QVQ/@@download/ENCFF259QVQ.bigBed hg19 released moderate library complexity, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF862QDQ fastq reads ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1291003577 Richard Myers, HAIB 08e3a4bb9de3b38325a675afe36d71ad SRA:SRR5339419 https://www.encodeproject.org/files/ENCFF862QDQ/@@download/ENCFF862QDQ.fastq.gz HiSeq 2000 /files/ENCFF090NGH/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF221TOX fastq reads ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1357461397 Richard Myers, HAIB 6401ef9b83258152f99c6e0b021fdd52 SRA:SRR5339420 https://www.encodeproject.org/files/ENCFF221TOX/@@download/ENCFF221TOX.fastq.gz HiSeq 2000 /files/ENCFF180PND/, /files/ENCFF381XXA/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF748DIW bam alignments ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 50 ENCFF807MUK, ENCFF862QDQ 765457821 ENCODE Processing Pipeline c8984cb355c0e48c15ff5d268459c790 https://www.encodeproject.org/files/ENCFF748DIW/@@download/ENCFF748DIW.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF328CQA bam alignments ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 50 ENCFF221TOX, ENCFF807MUK 1059935076 ENCODE Processing Pipeline b27f486549583a87718892b6f276c619 https://www.encodeproject.org/files/ENCFF328CQA/@@download/ENCFF328CQA.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF889DQQ bigWig signal p-value ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 ENCFF328CQA, ENCFF445QVI, ENCFF935ZWS 842665385 ENCODE Processing Pipeline 2f1d3d7b12cb13afc9aeb9eb37d4571a https://www.encodeproject.org/files/ENCFF889DQQ/@@download/ENCFF889DQQ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF634OUT bigWig signal p-value ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 ENCFF445QVI, ENCFF748DIW, ENCFF935ZWS 787851311 ENCODE Processing Pipeline dd04b7437a771ba008a33e1f3f1ba5d7 https://www.encodeproject.org/files/ENCFF634OUT/@@download/ENCFF634OUT.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF325AYV bigWig fold change over control ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 ENCFF328CQA, ENCFF445QVI, ENCFF935ZWS 695339973 ENCODE Processing Pipeline e9fc0a224a51cda279feb3642b07e558 https://www.encodeproject.org/files/ENCFF325AYV/@@download/ENCFF325AYV.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF269OKC bigWig fold change over control ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 ENCFF445QVI, ENCFF748DIW, ENCFF935ZWS 523603722 ENCODE Processing Pipeline 40c224470709d2a5106de329eb7c3503 https://www.encodeproject.org/files/ENCFF269OKC/@@download/ENCFF269OKC.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF146RPS bigBed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF389NMB 13322346 ENCODE Processing Pipeline 6ae2251fecc619b834e2997d74f4424f https://www.encodeproject.org/files/ENCFF146RPS/@@download/ENCFF146RPS.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF273ZDS bed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 ENCFF445QVI, ENCFF748DIW, ENCFF935ZWS 6189524 ENCODE Processing Pipeline 4c1449a60b201cba321fb887fa5900c1 https://www.encodeproject.org/files/ENCFF273ZDS/@@download/ENCFF273ZDS.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF278OPV bigBed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 ENCFF838ABE 13229914 ENCODE Processing Pipeline 1b4e67d0a16849bb571ace21449fe4bf https://www.encodeproject.org/files/ENCFF278OPV/@@download/ENCFF278OPV.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF295FCL bigWig signal p-value ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF328CQA, ENCFF445QVI, ENCFF748DIW, ENCFF935ZWS 961980690 ENCODE Processing Pipeline 1c7ccf0755cab7e5ef2ca3cf3f6565c3 https://www.encodeproject.org/files/ENCFF295FCL/@@download/ENCFF295FCL.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF327KPH bigWig fold change over control ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF328CQA, ENCFF445QVI, ENCFF748DIW, ENCFF935ZWS 1023543817 ENCODE Processing Pipeline eff04674d8189dfcdab691b82b03bfa6 https://www.encodeproject.org/files/ENCFF327KPH/@@download/ENCFF327KPH.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF838ABE bed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 ENCFF328CQA, ENCFF445QVI, ENCFF935ZWS 6510385 ENCODE Processing Pipeline fb26371bb0f418ebd525bfad0e747028 https://www.encodeproject.org/files/ENCFF838ABE/@@download/ENCFF838ABE.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF389NMB bed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF328CQA, ENCFF445QVI, ENCFF748DIW, ENCFF935ZWS 6897786 ENCODE Processing Pipeline b87cc44f43fa933e8cb605b912bbdffb https://www.encodeproject.org/files/ENCFF389NMB/@@download/ENCFF389NMB.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF154VEE bigBed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 ENCFF273ZDS 13399987 ENCODE Processing Pipeline 81c1c6e130e8d37be8697d25b2ebeef3 https://www.encodeproject.org/files/ENCFF154VEE/@@download/ENCFF154VEE.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF010SVS bam unfiltered alignments ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF862QDQ 1359618510 ENCODE Processing Pipeline fc67f918c499fdf6dc3eece4cb1a3619 https://www.encodeproject.org/files/ENCFF010SVS/@@download/ENCFF010SVS.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF870XDV bam unfiltered alignments ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 50 ENCFF221TOX, ENCFF643CGH 1477620199 ENCODE Processing Pipeline 6e132f0fcbf4703b8aa52db5031d10cf https://www.encodeproject.org/files/ENCFF870XDV/@@download/ENCFF870XDV.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF127DWU bam alignments ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF862QDQ 768707575 ENCODE Processing Pipeline ab554e2454afe47ba208a1a45fa727f0 https://www.encodeproject.org/files/ENCFF127DWU/@@download/ENCFF127DWU.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF890TFD bam alignments ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 50 ENCFF221TOX, ENCFF643CGH 1065261651 ENCODE Processing Pipeline dde22eb23ff7454fe954b5ee07381ddf https://www.encodeproject.org/files/ENCFF890TFD/@@download/ENCFF890TFD.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF994DRD bigWig signal p-value ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 ENCFF127DWU, ENCFF290EGQ, ENCFF940GKZ 779004221 ENCODE Processing Pipeline ea45f1dd3ef82686731ec08992eb2b3d https://www.encodeproject.org/files/ENCFF994DRD/@@download/ENCFF994DRD.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF273DCX bigWig signal p-value ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 ENCFF290EGQ, ENCFF890TFD, ENCFF940GKZ 986128164 ENCODE Processing Pipeline c6a71b07d8d6082ffaa85b0ea6fa878c https://www.encodeproject.org/files/ENCFF273DCX/@@download/ENCFF273DCX.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF729KEI bigWig signal p-value ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF127DWU, ENCFF290EGQ, ENCFF890TFD, ENCFF940GKZ 1017242398 ENCODE Processing Pipeline c965d2dd69e4a6fb598bb626c5823ba3 https://www.encodeproject.org/files/ENCFF729KEI/@@download/ENCFF729KEI.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF819GZC bigWig fold change over control ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 ENCFF290EGQ, ENCFF890TFD, ENCFF940GKZ 696688768 ENCODE Processing Pipeline 7010504d15ab0f5ddde4652c1db729ac https://www.encodeproject.org/files/ENCFF819GZC/@@download/ENCFF819GZC.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF242RTA bigWig fold change over control ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 ENCFF127DWU, ENCFF290EGQ, ENCFF940GKZ 508413746 ENCODE Processing Pipeline d3ca5c1b4385b376e2353b8657365754 https://www.encodeproject.org/files/ENCFF242RTA/@@download/ENCFF242RTA.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF930HBS bigWig fold change over control ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF127DWU, ENCFF290EGQ, ENCFF890TFD, ENCFF940GKZ 1005662567 ENCODE Processing Pipeline adc189b586d25e9b9e1e956384a870db https://www.encodeproject.org/files/ENCFF930HBS/@@download/ENCFF930HBS.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF219QPR bigBed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 ENCFF758YNV 13372096 ENCODE Processing Pipeline 7cd777aee8ead7975ff5dd6ee47a9d6b https://www.encodeproject.org/files/ENCFF219QPR/@@download/ENCFF219QPR.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF919MOX bed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 ENCFF290EGQ, ENCFF890TFD, ENCFF940GKZ 6355816 ENCODE Processing Pipeline ea1ff62e038fdfede8feeb236c14435e https://www.encodeproject.org/files/ENCFF919MOX/@@download/ENCFF919MOX.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF414HSP bigBed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1 ENCFF919MOX 13203451 ENCODE Processing Pipeline faf08a7583ff7b30cb26b6e29d7165a8 https://www.encodeproject.org/files/ENCFF414HSP/@@download/ENCFF414HSP.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF097WEC bed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF127DWU, ENCFF290EGQ, ENCFF890TFD, ENCFF940GKZ 6775463 ENCODE Processing Pipeline 322f3f574a126800de6b85e7d7631f94 https://www.encodeproject.org/files/ENCFF097WEC/@@download/ENCFF097WEC.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF758YNV bed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 2 ENCFF127DWU, ENCFF290EGQ, ENCFF940GKZ 5900512 ENCODE Processing Pipeline ca0652e00c4645dd6c4d0798080dab6c https://www.encodeproject.org/files/ENCFF758YNV/@@download/ENCFF758YNV.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF989DMQ bigBed narrowPeak peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF097WEC 13351735 ENCODE Processing Pipeline 4bdb188a8cc681aecf3fdfec894c6d7d https://www.encodeproject.org/files/ENCFF989DMQ/@@download/ENCFF989DMQ.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF229XLK bigBed narrowPeak optimal idr thresholded peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF070SOX 792956 ENCODE Processing Pipeline b09e13c00a051ac9777d37749592512e https://www.encodeproject.org/files/ENCFF229XLK/@@download/ENCFF229XLK.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF013PBU bed narrowPeak conservative idr thresholded peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF097WEC, ENCFF419RSJ, ENCFF758YNV, ENCFF919MOX 363592 ENCODE Processing Pipeline 1553a710bfa67ca0e1dd06818a2a2b47 https://www.encodeproject.org/files/ENCFF013PBU/@@download/ENCFF013PBU.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF012HPV bigBed narrowPeak conservative idr thresholded peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF013PBU 754252 ENCODE Processing Pipeline 005f577663d2792df91f64b4779bab56 https://www.encodeproject.org/files/ENCFF012HPV/@@download/ENCFF012HPV.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF070SOX bed narrowPeak optimal idr thresholded peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF097WEC, ENCFF419RSJ, ENCFF758YNV, ENCFF919MOX 389087 ENCODE Processing Pipeline 68fb55ca044b0b63e2826cc780bce97f https://www.encodeproject.org/files/ENCFF070SOX/@@download/ENCFF070SOX.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF773EXP bed narrowPeak conservative idr thresholded peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF273ZDS, ENCFF389NMB, ENCFF838ABE 308453 ENCODE Processing Pipeline 5a747a760a5777ccaa80f3becbd61f2c https://www.encodeproject.org/files/ENCFF773EXP/@@download/ENCFF773EXP.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF788LSH bed narrowPeak optimal idr thresholded peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF273ZDS, ENCFF389NMB, ENCFF838ABE 324597 ENCODE Processing Pipeline 63ff827b2e1cbb2c9e897d6d4273086c https://www.encodeproject.org/files/ENCFF788LSH/@@download/ENCFF788LSH.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF741OJZ bigBed narrowPeak conservative idr thresholded peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF773EXP 541265 ENCODE Processing Pipeline bb9e413975b4070784dfa9cda53f9387 https://www.encodeproject.org/files/ENCFF741OJZ/@@download/ENCFF741OJZ.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF298WZV bigBed narrowPeak optimal idr thresholded peaks ENCSR860UHK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens CBFB-human ENCAB725LFJ DNA False 2016-06-13 ENCODE 1, 2 ENCFF788LSH 562614 ENCODE Processing Pipeline 920d8806b19a39ba983d7ee87e4be850 https://www.encodeproject.org/files/ENCFF298WZV/@@download/ENCFF298WZV.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF000OEW bigBed broadPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZA 147213 Richard Myers, HAIB bcf3aa422c5814c731b9b557509e5560 https://www.encodeproject.org/files/ENCFF000OEW/@@download/ENCFF000OEW.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OEX bigBed broadPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZB 142887 Richard Myers, HAIB 53fcfe92ca87c781d38b550a8965508a https://www.encodeproject.org/files/ENCFF000OEX/@@download/ENCFF000OEX.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OEY bam alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OFK 1037265261 Richard Myers, HAIB 2f9e9cf357db38a89a9b9792d1d42c10 https://www.encodeproject.org/files/ENCFF000OEY/@@download/ENCFF000OEY.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OEZ bam alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OFM 1110983058 Richard Myers, HAIB cfa9f1725478c7b5d11c7dd6c83730f5 https://www.encodeproject.org/files/ENCFF000OEZ/@@download/ENCFF000OEZ.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OFA bigWig raw signal ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 37539587 Richard Myers, HAIB c67310cd43e0b50fbc3c011c5c598a59 https://www.encodeproject.org/files/ENCFF000OFA/@@download/ENCFF000OFA.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OFB bigWig raw signal ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 38985726 Richard Myers, HAIB b78a1a3a2e838c58c3edc6e24a465944 https://www.encodeproject.org/files/ENCFF000OFB/@@download/ENCFF000OFB.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OFK fastq reads ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1737543499 Richard Myers, HAIB f4201e5af47210bd109495e6b9bc6320 https://www.encodeproject.org/files/ENCFF000OFK/@@download/ENCFF000OFK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODJ/ released inconsistent control read length, control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OFM fastq reads ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 2380957280 Richard Myers, HAIB 604cb1d648c1be31128954f60cb467e8 https://www.encodeproject.org/files/ENCFF000OFM/@@download/ENCFF000OFM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODG/ released inconsistent control read length, control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001TZA bed broadPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 58183 Richard Myers, HAIB abddb0f0d7cd46adb9fbc08b4d31f8d1 https://www.encodeproject.org/files/ENCFF001TZA/@@download/ENCFF001TZA.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TZB bed broadPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 65764 Richard Myers, HAIB 1e842c2f75c0452b3c5193e857ad04b1 https://www.encodeproject.org/files/ENCFF001TZB/@@download/ENCFF001TZB.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CHW bed narrowPeak optimal idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 184095 ENCODE Consortium Analysis Working Group 51328a96dd2d0fa59860316ae77b9b4b https://www.encodeproject.org/files/ENCFF002CHW/@@download/ENCFF002CHW.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF591FNK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE ENCFF002CHW 426769 ENCODE Consortium 1d105f13e89076333f94baa5a949657d https://www.encodeproject.org/files/ENCFF591FNK/@@download/ENCFF591FNK.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF497WHG bam unfiltered alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OFK, ENCFF807MUK 1943676930 ENCODE Processing Pipeline 66b2f1179b70c8e1948899db29476c66 https://www.encodeproject.org/files/ENCFF497WHG/@@download/ENCFF497WHG.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF210YHD bam alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OFK, ENCFF807MUK 626297927 ENCODE Processing Pipeline b32491c135796fb886d2bafb7b375020 https://www.encodeproject.org/files/ENCFF210YHD/@@download/ENCFF210YHD.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF263NOT bam alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OFK, ENCFF643CGH 630867459 ENCODE Processing Pipeline d11c04ad0ebf411ae606a5f1dff97188 https://www.encodeproject.org/files/ENCFF263NOT/@@download/ENCFF263NOT.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF323SHI bam unfiltered alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 25 ENCFF000OFK, ENCFF643CGH 1950206485 ENCODE Processing Pipeline be3087a894738abea84e8c4cf439d706 https://www.encodeproject.org/files/ENCFF323SHI/@@download/ENCFF323SHI.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF731ZNW bam alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OFM, ENCFF643CGH 693781453 ENCODE Processing Pipeline 8af589ba02fdb061cd605c19ae3330d5 https://www.encodeproject.org/files/ENCFF731ZNW/@@download/ENCFF731ZNW.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF187ZGJ bam alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OFM, ENCFF807MUK 690261890 ENCODE Processing Pipeline 176e0fbfda4e10e02d4d148ab203fcfe https://www.encodeproject.org/files/ENCFF187ZGJ/@@download/ENCFF187ZGJ.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF387WBW bam unfiltered alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OFM, ENCFF643CGH 2516275564 ENCODE Processing Pipeline 22b7315335add7500a5af22cea098be4 https://www.encodeproject.org/files/ENCFF387WBW/@@download/ENCFF387WBW.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF351NJK bam unfiltered alignments ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 25 ENCFF000OFM, ENCFF807MUK 2509265522 ENCODE Processing Pipeline f9b40db10c34ab533b2cd469db728728 https://www.encodeproject.org/files/ENCFF351NJK/@@download/ENCFF351NJK.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF552IHW bigWig signal p-value ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF731ZNW, ENCFF862QZT 583853353 ENCODE Processing Pipeline efcff000b83e33480fdc5aaeb6fb21c1 https://www.encodeproject.org/files/ENCFF552IHW/@@download/ENCFF552IHW.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF919XDC bigWig signal p-value ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF263NOT, ENCFF289ONG, ENCFF862QZT 539652592 ENCODE Processing Pipeline c54a57d4097dcf5e0d770635a442b133 https://www.encodeproject.org/files/ENCFF919XDC/@@download/ENCFF919XDC.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF142EZZ bigWig signal p-value ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF187ZGJ, ENCFF416BIN, ENCFF818ZLY 516542078 ENCODE Processing Pipeline 7c9c8207d4708fe0b7d5de1fc38806b2 https://www.encodeproject.org/files/ENCFF142EZZ/@@download/ENCFF142EZZ.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF889FHJ bigWig signal p-value ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF210YHD, ENCFF416BIN, ENCFF818ZLY 527520958 ENCODE Processing Pipeline 8a6fe266bb4de9f4504a64dc4bfb147b https://www.encodeproject.org/files/ENCFF889FHJ/@@download/ENCFF889FHJ.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF901YGR bigWig signal p-value ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF263NOT, ENCFF289ONG, ENCFF731ZNW, ENCFF862QZT 825163141 ENCODE Processing Pipeline b7ecf10ae9a26c2807314abdf3e9d099 https://www.encodeproject.org/files/ENCFF901YGR/@@download/ENCFF901YGR.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF547MAP bigWig fold change over control ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF731ZNW, ENCFF862QZT 395649923 ENCODE Processing Pipeline ec73e9c5b6d596508b3f3118e558772e https://www.encodeproject.org/files/ENCFF547MAP/@@download/ENCFF547MAP.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF108IRL bigWig signal p-value ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF187ZGJ, ENCFF210YHD, ENCFF416BIN, ENCFF818ZLY 662079610 ENCODE Processing Pipeline ec531e76ca6989c43e479f3a4955cb1d https://www.encodeproject.org/files/ENCFF108IRL/@@download/ENCFF108IRL.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF519SOT bigWig fold change over control ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF263NOT, ENCFF289ONG, ENCFF862QZT 390070106 ENCODE Processing Pipeline 7647d58f1b164ad1e3220703f6d3df10 https://www.encodeproject.org/files/ENCFF519SOT/@@download/ENCFF519SOT.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF685JIC bigWig fold change over control ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF187ZGJ, ENCFF416BIN, ENCFF818ZLY 396454967 ENCODE Processing Pipeline f259cd4fc6dbaa17be707d0a284567ed https://www.encodeproject.org/files/ENCFF685JIC/@@download/ENCFF685JIC.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF839SCO bigWig fold change over control ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF263NOT, ENCFF289ONG, ENCFF731ZNW, ENCFF862QZT 654593904 ENCODE Processing Pipeline e7287fe847a679093313802aa8c8f440 https://www.encodeproject.org/files/ENCFF839SCO/@@download/ENCFF839SCO.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF670YYF bigWig fold change over control ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF210YHD, ENCFF416BIN, ENCFF818ZLY 392175983 ENCODE Processing Pipeline a451e424cc2a9c6d48bf6ec80618070c https://www.encodeproject.org/files/ENCFF670YYF/@@download/ENCFF670YYF.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF128VPM bigBed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF143LWQ 11200313 ENCODE Processing Pipeline 6240b5214d1ecc95f1f6c5be1851aed6 https://www.encodeproject.org/files/ENCFF128VPM/@@download/ENCFF128VPM.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF325QYD bed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF289ONG, ENCFF731ZNW, ENCFF862QZT 4958331 ENCODE Processing Pipeline 8c709c81bb435b3d2c1544b35aef59c2 https://www.encodeproject.org/files/ENCFF325QYD/@@download/ENCFF325QYD.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF143LWQ bed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF263NOT, ENCFF289ONG, ENCFF862QZT 5314045 ENCODE Processing Pipeline a86ea2313a080cd0f567db48386cf1b4 https://www.encodeproject.org/files/ENCFF143LWQ/@@download/ENCFF143LWQ.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF801IPK bed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF263NOT, ENCFF289ONG, ENCFF731ZNW, ENCFF862QZT 6091662 ENCODE Processing Pipeline 56634b7b1e07519b5a28a84100c88877 https://www.encodeproject.org/files/ENCFF801IPK/@@download/ENCFF801IPK.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF077HTK bigBed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF325QYD 11030487 ENCODE Processing Pipeline 76f06b791cf5dd45ab20e71976c95041 https://www.encodeproject.org/files/ENCFF077HTK/@@download/ENCFF077HTK.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF662ICX bigWig fold change over control ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF187ZGJ, ENCFF210YHD, ENCFF416BIN, ENCFF818ZLY 641493499 ENCODE Processing Pipeline 5b1bcc603b0ced254bdd45f366bf0c5a https://www.encodeproject.org/files/ENCFF662ICX/@@download/ENCFF662ICX.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF709SWY bigBed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF801IPK 11324935 ENCODE Processing Pipeline 433473ad8300ff43704f3f5ad473fe02 https://www.encodeproject.org/files/ENCFF709SWY/@@download/ENCFF709SWY.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF012LEV bed narrowPeak conservative idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF143LWQ, ENCFF325QYD, ENCFF419RSJ, ENCFF801IPK 51326 ENCODE Processing Pipeline 5aa2f8e7b0a545c0772cc4596ae323f1 https://www.encodeproject.org/files/ENCFF012LEV/@@download/ENCFF012LEV.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF883EFM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF012LEV 148608 ENCODE Processing Pipeline 7e7f027d73ede4ac6b03e685bd1662ed https://www.encodeproject.org/files/ENCFF883EFM/@@download/ENCFF883EFM.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF339GTZ bed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF187ZGJ, ENCFF210YHD, ENCFF416BIN, ENCFF818ZLY 6100916 ENCODE Processing Pipeline 3cab67dfcb47113a788fc3bbbf2b37ac https://www.encodeproject.org/files/ENCFF339GTZ/@@download/ENCFF339GTZ.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF182IFE bed narrowPeak optimal idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF143LWQ, ENCFF325QYD, ENCFF419RSJ, ENCFF801IPK 55500 ENCODE Processing Pipeline ff130149520ea9b718f987e52d3e4370 https://www.encodeproject.org/files/ENCFF182IFE/@@download/ENCFF182IFE.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF227UBQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF182IFE 155358 ENCODE Processing Pipeline 3e7aa81bbf6162d90057877a136ec3c9 https://www.encodeproject.org/files/ENCFF227UBQ/@@download/ENCFF227UBQ.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF972PDN bed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF187ZGJ, ENCFF416BIN, ENCFF818ZLY 4984004 ENCODE Processing Pipeline 96eceb07f8556ee2b0b3adf000ed21c5 https://www.encodeproject.org/files/ENCFF972PDN/@@download/ENCFF972PDN.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF613VCR bed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF210YHD, ENCFF416BIN, ENCFF818ZLY 5316251 ENCODE Processing Pipeline 633f1f5876b47332344eb8962527dba3 https://www.encodeproject.org/files/ENCFF613VCR/@@download/ENCFF613VCR.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF194GQP bigBed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF613VCR 11200410 ENCODE Processing Pipeline 40de2ff0f0af3b89391da49e23ee081a https://www.encodeproject.org/files/ENCFF194GQP/@@download/ENCFF194GQP.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF320OXU bigBed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF339GTZ 11299403 ENCODE Processing Pipeline 82c6485850e5eb88fbf020d7abfedff5 https://www.encodeproject.org/files/ENCFF320OXU/@@download/ENCFF320OXU.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF721BKY bigBed narrowPeak peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF972PDN 11031195 ENCODE Processing Pipeline e3d20c5c47483044437177d42c6fa11b https://www.encodeproject.org/files/ENCFF721BKY/@@download/ENCFF721BKY.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF593FGJ bed narrowPeak conservative idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF339GTZ, ENCFF613VCR, ENCFF972PDN 51032 ENCODE Processing Pipeline e9899aee5e2765c75a27bd2c8db8cdce https://www.encodeproject.org/files/ENCFF593FGJ/@@download/ENCFF593FGJ.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF320KBS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF593FGJ 148301 ENCODE Processing Pipeline bd72b03b25d8706e97a1d89305e4f0d4 https://www.encodeproject.org/files/ENCFF320KBS/@@download/ENCFF320KBS.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF199WGD bed narrowPeak optimal idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF339GTZ, ENCFF613VCR, ENCFF972PDN 55949 ENCODE Processing Pipeline edc30706d0e012b4c150f744cbd30f3f https://www.encodeproject.org/files/ENCFF199WGD/@@download/ENCFF199WGD.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF572HLP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGE ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF199WGD 155407 ENCODE Processing Pipeline 735bc1bc4a46256f6fbddf05f742990c https://www.encodeproject.org/files/ENCFF572HLP/@@download/ENCFF572HLP.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001RUK fastq reads ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1331817680 Richard Myers, HAIB 32cd07386ea4618d9e4d928f4e59e102 SRA:SRR5331596 https://www.encodeproject.org/files/ENCFF001RUK/@@download/ENCFF001RUK.fastq.gz HiSeq 2000 /files/ENCFF001RVN/ released antibody characterized with exemption, low read depth ENCFF696VXH fastq reads ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1396047848 Richard Myers, HAIB 1d54dcc020f39b3d77625553e176b8c4 SRA:SRR5331597 https://www.encodeproject.org/files/ENCFF696VXH/@@download/ENCFF696VXH.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption, low read depth ENCFF515KNP bam unfiltered alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUK, ENCFF643CGH 1419700983 ENCODE Processing Pipeline 9afadaeb08b0391a0743b2b6cc592096 https://www.encodeproject.org/files/ENCFF515KNP/@@download/ENCFF515KNP.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF002FHN bam alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUK, ENCFF643CGH 1034444747 ENCODE Processing Pipeline 20cfda0b36f9878a3868fedf9874765f https://www.encodeproject.org/files/ENCFF002FHN/@@download/ENCFF002FHN.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF918SIT bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ 925460065 ENCODE Processing Pipeline f762e5f6106115dc78bc8910418eb056 https://www.encodeproject.org/files/ENCFF918SIT/@@download/ENCFF918SIT.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF277UWP bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 1133953291 ENCODE Processing Pipeline fd9cbf2a17dcaeb2cf369b9af4cb17c5 https://www.encodeproject.org/files/ENCFF277UWP/@@download/ENCFF277UWP.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF583JWT bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ 760598263 ENCODE Processing Pipeline 76cbcc958190332fd61b70c1ff8f3196 https://www.encodeproject.org/files/ENCFF583JWT/@@download/ENCFF583JWT.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF324FAQ bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 1169759986 ENCODE Processing Pipeline 824f5c8726c06dfcf13b4282c6301975 https://www.encodeproject.org/files/ENCFF324FAQ/@@download/ENCFF324FAQ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF699AFZ bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 712355051 ENCODE Processing Pipeline 9eb9c0fd734dea3f271b875c6582fd13 https://www.encodeproject.org/files/ENCFF699AFZ/@@download/ENCFF699AFZ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF328UEJ bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 1158267341 ENCODE Processing Pipeline 6f89c61f2a28807f751c3e4e3c3f03a5 https://www.encodeproject.org/files/ENCFF328UEJ/@@download/ENCFF328UEJ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF355XHR bam unfiltered alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUK, ENCFF807MUK 1416929475 ENCODE Processing Pipeline b540bab6bfe08a31b1f414f3bf98d8e7 https://www.encodeproject.org/files/ENCFF355XHR/@@download/ENCFF355XHR.bam hg19 released antibody characterized with exemption, low read depth ENCFF636GYT bam alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUK, ENCFF807MUK 1034920838 ENCODE Processing Pipeline 7e781bae7e942fc0379038f78f4f5373 https://www.encodeproject.org/files/ENCFF636GYT/@@download/ENCFF636GYT.bam hg19 released antibody characterized with exemption, low read depth ENCFF791ACK bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF770XGT 13369873 ENCODE Processing Pipeline e698d0ccb4f9c04165cff812b3fedb18 https://www.encodeproject.org/files/ENCFF791ACK/@@download/ENCFF791ACK.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF449ZKG bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 6242857 ENCODE Processing Pipeline f57d50dd25547d438eb2fc58621272f0 https://www.encodeproject.org/files/ENCFF449ZKG/@@download/ENCFF449ZKG.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF770XGT bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 6705971 ENCODE Processing Pipeline a77523a29d6805fc32c4923362d93d67 https://www.encodeproject.org/files/ENCFF770XGT/@@download/ENCFF770XGT.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF888BUW bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ 5969385 ENCODE Processing Pipeline 29ddfe6d51e93a5c50b47a4a97fd5512 https://www.encodeproject.org/files/ENCFF888BUW/@@download/ENCFF888BUW.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF003DZL bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF888BUW 13326393 ENCODE Processing Pipeline a5a0b2319f054b3cc95e53f2f2f431d7 https://www.encodeproject.org/files/ENCFF003DZL/@@download/ENCFF003DZL.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF524FAN bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF449ZKG 13384804 ENCODE Processing Pipeline 83b1b961bed2fa71dc702f671054929b https://www.encodeproject.org/files/ENCFF524FAN/@@download/ENCFF524FAN.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF452INW bed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF449ZKG, ENCFF770XGT, ENCFF888BUW 87475 ENCODE Processing Pipeline 452e76c6b1cde91d31a6cea314121946 https://www.encodeproject.org/files/ENCFF452INW/@@download/ENCFF452INW.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF426GSY bed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF449ZKG, ENCFF770XGT, ENCFF888BUW 123462 ENCODE Processing Pipeline f372203cf93a8bdcd16c8592f8bfcf8d https://www.encodeproject.org/files/ENCFF426GSY/@@download/ENCFF426GSY.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF846SVG bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF426GSY 278512 ENCODE Processing Pipeline 8d5ba2913fcc67fadf89a162348b978f https://www.encodeproject.org/files/ENCFF846SVG/@@download/ENCFF846SVG.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF069TOP bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF452INW 224076 ENCODE Processing Pipeline 6007617e3cbe4127c6baa3b8d19e2a2c https://www.encodeproject.org/files/ENCFF069TOP/@@download/ENCFF069TOP.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF905HXC bam unfiltered alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF643CGH, ENCFF696VXH 1497814819 ENCODE Processing Pipeline 33fc961f7c3e416e0988b328fe19c2be https://www.encodeproject.org/files/ENCFF905HXC/@@download/ENCFF905HXC.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF836NST bam alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF643CGH, ENCFF696VXH 1074173245 ENCODE Processing Pipeline c0eeef98b50ccbaf469ee7612fc1bcc0 https://www.encodeproject.org/files/ENCFF836NST/@@download/ENCFF836NST.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF307VES bam unfiltered alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF696VXH, ENCFF807MUK 1494337679 ENCODE Processing Pipeline 694212b3fb9ea94d22ac517e25bc4df7 https://www.encodeproject.org/files/ENCFF307VES/@@download/ENCFF307VES.bam hg19 released antibody characterized with exemption, low read depth ENCFF970YTT bam alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF696VXH, ENCFF807MUK 1074861134 ENCODE Processing Pipeline 5ec7a3e024110ee86259720e498b3d12 https://www.encodeproject.org/files/ENCFF970YTT/@@download/ENCFF970YTT.bam hg19 released antibody characterized with exemption, low read depth ENCFF956QNK bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF970YTT 1169317167 ENCODE Processing Pipeline 424b9f46260dca24101d7f6080b407ef https://www.encodeproject.org/files/ENCFF956QNK/@@download/ENCFF956QNK.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF331DKM bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT, ENCFF970YTT 1103172585 ENCODE Processing Pipeline 17bb19b0be12b83aefc192456bc332e2 https://www.encodeproject.org/files/ENCFF331DKM/@@download/ENCFF331DKM.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF639XEG bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF970YTT 711605941 ENCODE Processing Pipeline 9522a76905999a619465798c855d3173 https://www.encodeproject.org/files/ENCFF639XEG/@@download/ENCFF639XEG.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF884NXM bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT, ENCFF970YTT 1180282094 ENCODE Processing Pipeline 707fc3396824db3f692cb20ab510f51e https://www.encodeproject.org/files/ENCFF884NXM/@@download/ENCFF884NXM.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF235BMG bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT, ENCFF970YTT 6694225 ENCODE Processing Pipeline 8fbe67c8e544b0c77491a647e48ab12c https://www.encodeproject.org/files/ENCFF235BMG/@@download/ENCFF235BMG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF058UQC bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF545VNY 275487 ENCODE Processing Pipeline b40e4b834dae013333ef15e1c0adf333 https://www.encodeproject.org/files/ENCFF058UQC/@@download/ENCFF058UQC.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF539MNA bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT 6192680 ENCODE Processing Pipeline 929042b07cf8f9c996d1039cf9d60363 https://www.encodeproject.org/files/ENCFF539MNA/@@download/ENCFF539MNA.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF095DJV bed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF235BMG, ENCFF539MNA, ENCFF915TWO 86751 ENCODE Processing Pipeline f5abbd0ace1017af73f7970bd0533b9c https://www.encodeproject.org/files/ENCFF095DJV/@@download/ENCFF095DJV.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF550PLL bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF095DJV 222611 ENCODE Processing Pipeline e5ae3c5bd58a04e4f4b2a6f12d1fe211 https://www.encodeproject.org/files/ENCFF550PLL/@@download/ENCFF550PLL.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF545VNY bed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF235BMG, ENCFF539MNA, ENCFF915TWO 122108 ENCODE Processing Pipeline a29ad50d06ead7823ea05e7b4a848633 https://www.encodeproject.org/files/ENCFF545VNY/@@download/ENCFF545VNY.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF158MPA bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF235BMG 13355647 ENCODE Processing Pipeline 5df3289489e7aee80f1b5e5f40acc7b7 https://www.encodeproject.org/files/ENCFF158MPA/@@download/ENCFF158MPA.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF915TWO bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF970YTT 6245568 ENCODE Processing Pipeline be53c15e63e17b68db330f759e7bf3e4 https://www.encodeproject.org/files/ENCFF915TWO/@@download/ENCFF915TWO.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF492SKI bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF539MNA 13336446 ENCODE Processing Pipeline fead6907f3c5c3ffe42f1e299603da9c https://www.encodeproject.org/files/ENCFF492SKI/@@download/ENCFF492SKI.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF662EWP bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF915TWO 13376467 ENCODE Processing Pipeline e9d1cd375a4d39b91fcc8f7371c0e478 https://www.encodeproject.org/files/ENCFF662EWP/@@download/ENCFF662EWP.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF000ONK bam alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000ONR 917482142 Richard Myers, HAIB 8ab3121c0ea78a7ffe8c4a2d80ea7cb5 https://www.encodeproject.org/files/ENCFF000ONK/@@download/ENCFF000ONK.bam hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ONL bigBed broadPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBA 1428260 Richard Myers, HAIB 031595b86210ae0a5f0aa7b3cc5e12bf https://www.encodeproject.org/files/ENCFF000ONL/@@download/ENCFF000ONL.bigBed hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ONM bigBed broadPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBB 952166 Richard Myers, HAIB bb410347eca0e950eac3cf784616482d https://www.encodeproject.org/files/ENCFF000ONM/@@download/ENCFF000ONM.bigBed hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ONN bam alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OOF 2891632176 Richard Myers, HAIB 42a46879e81fb8d2414d6a680d4b228a https://www.encodeproject.org/files/ENCFF000ONN/@@download/ENCFF000ONN.bam hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ONO bigWig raw signal ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 1 47453877 Richard Myers, HAIB 5d0efb3187d5e1808c35fe0d38be2a7f https://www.encodeproject.org/files/ENCFF000ONO/@@download/ENCFF000ONO.bigWig hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000ONQ bigWig raw signal ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 1 110858628 Richard Myers, HAIB 7b8da3a60d4c81f9883b07f17aed766a https://www.encodeproject.org/files/ENCFF000ONQ/@@download/ENCFF000ONQ.bigWig hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000ONR fastq reads ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 898090026 Richard Myers, HAIB 45f22b30c27b3df7cfb9410bcc5bc905 https://www.encodeproject.org/files/ENCFF000ONR/@@download/ENCFF000ONR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000OOF fastq reads ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 3549258093 Richard Myers, HAIB 35851b582e4bbc6f2fb7ac0d4731293d https://www.encodeproject.org/files/ENCFF000OOF/@@download/ENCFF000OOF.fastq.gz HiSeq 2000 /files/ENCFF000OSP/ released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF001UBA bed broadPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 1 926307 Richard Myers, HAIB a617e93bd27850429c75bce1bd4d6c01 https://www.encodeproject.org/files/ENCFF001UBA/@@download/ENCFF001UBA.bed.gz hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UBB bed broadPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 1 574894 Richard Myers, HAIB 972e387e912e4447b384169e691558a8 https://www.encodeproject.org/files/ENCFF001UBB/@@download/ENCFF001UBB.bed.gz hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CIU bed narrowPeak optimal idr thresholded peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1097021 ENCODE Consortium Analysis Working Group 0071595b80838346905bf40e3186b251 https://www.encodeproject.org/files/ENCFF002CIU/@@download/ENCFF002CIU.bed.gz hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF121SPD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE ENCFF002CIU 2359404 ENCODE Consortium cc1f40738b5a759a69edb42efd666257 https://www.encodeproject.org/files/ENCFF121SPD/@@download/ENCFF121SPD.bigBed hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF551FQW bam alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ONR, ENCFF643CGH 547282482 ENCODE Processing Pipeline 25a22afde7902f357c3842b9d0c743a5 https://www.encodeproject.org/files/ENCFF551FQW/@@download/ENCFF551FQW.bam GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF506MWT bam unfiltered alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ONR, ENCFF643CGH 1089328301 ENCODE Processing Pipeline faee24bfe6d46fe3dea928bf3435b23e https://www.encodeproject.org/files/ENCFF506MWT/@@download/ENCFF506MWT.bam GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF397FGK bam alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOF, ENCFF643CGH 1953262346 ENCODE Processing Pipeline dcbcfc3224188cf5940609498bbeec5b https://www.encodeproject.org/files/ENCFF397FGK/@@download/ENCFF397FGK.bam GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF147FOR bam unfiltered alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOF, ENCFF643CGH 4291667330 ENCODE Processing Pipeline 4d5a2bac7d4609fd464bbcb48eb1da04 https://www.encodeproject.org/files/ENCFF147FOR/@@download/ENCFF147FOR.bam GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF736GTL bam unfiltered alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ONR, ENCFF807MUK 1086144450 ENCODE Processing Pipeline a55ed70604ce60a72ead0ea032f6597a https://www.encodeproject.org/files/ENCFF736GTL/@@download/ENCFF736GTL.bam hg19 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF639ACF bam alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ONR, ENCFF807MUK 547656106 ENCODE Processing Pipeline eb541133581614e5d103e32aff6ed2d0 https://www.encodeproject.org/files/ENCFF639ACF/@@download/ENCFF639ACF.bam hg19 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF222CWF bam unfiltered alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOF, ENCFF807MUK 4280080339 ENCODE Processing Pipeline 768ea106b32994d0afae661b703c88f0 https://www.encodeproject.org/files/ENCFF222CWF/@@download/ENCFF222CWF.bam hg19 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF483RYF bam alignments ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OOF, ENCFF807MUK 1953877467 ENCODE Processing Pipeline 8c2b9a06de05ece87b81c1adbb42bf23 https://www.encodeproject.org/files/ENCFF483RYF/@@download/ENCFF483RYF.bam hg19 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF145XHJ bigWig signal p-value ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF551FQW 488267764 ENCODE Processing Pipeline 91daa50dd4410fa7772cafed49bb74ce https://www.encodeproject.org/files/ENCFF145XHJ/@@download/ENCFF145XHJ.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF125JMK bigWig signal p-value ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF397FGK 563767255 ENCODE Processing Pipeline f634593a92b006463c365b94bb4557bf https://www.encodeproject.org/files/ENCFF125JMK/@@download/ENCFF125JMK.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF147GRN bigWig signal p-value ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF397FGK, ENCFF551FQW 547728523 ENCODE Processing Pipeline a543d16b53a81682cf74f21a53b34f1f https://www.encodeproject.org/files/ENCFF147GRN/@@download/ENCFF147GRN.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF549TOE bigWig fold change over control ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF551FQW 281306015 ENCODE Processing Pipeline 0252ae4849d40f4b2add68427f781130 https://www.encodeproject.org/files/ENCFF549TOE/@@download/ENCFF549TOE.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF493IMI bigWig fold change over control ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF397FGK 724139604 ENCODE Processing Pipeline 61815f76e19df381ce202ce5f976c698 https://www.encodeproject.org/files/ENCFF493IMI/@@download/ENCFF493IMI.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF917LAZ bed narrowPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF397FGK 5426271 ENCODE Processing Pipeline 25a26e919376e949104a8fea0209a183 https://www.encodeproject.org/files/ENCFF917LAZ/@@download/ENCFF917LAZ.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF473IZV bigWig fold change over control ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF397FGK, ENCFF551FQW 884521032 ENCODE Processing Pipeline 0dee5441f8e4265d4b6a9f7cdddfb28f https://www.encodeproject.org/files/ENCFF473IZV/@@download/ENCFF473IZV.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF528DYD bed narrowPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF551FQW 4365851 ENCODE Processing Pipeline 70b774a9691c1e5433152bb1b26d3c92 https://www.encodeproject.org/files/ENCFF528DYD/@@download/ENCFF528DYD.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF904DSP bed narrowPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF397FGK, ENCFF551FQW 5604561 ENCODE Processing Pipeline b2e441a9b2f5483917f811e972c537b4 https://www.encodeproject.org/files/ENCFF904DSP/@@download/ENCFF904DSP.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF409WWH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF991GTC 1253018 ENCODE Processing Pipeline 5233edf0f817cf6d7d426581c04ed79a https://www.encodeproject.org/files/ENCFF409WWH/@@download/ENCFF409WWH.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF536WST bigBed narrowPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF904DSP 11607084 ENCODE Processing Pipeline 1e9a6e6b2bb060f8efd517a1fe8cd07c https://www.encodeproject.org/files/ENCFF536WST/@@download/ENCFF536WST.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF842UZW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF821AQO 1522821 ENCODE Processing Pipeline 7711af1905dd552a40d20c59cf20a342 https://www.encodeproject.org/files/ENCFF842UZW/@@download/ENCFF842UZW.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF228IAW bigBed narrowPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF528DYD 8857666 ENCODE Processing Pipeline 296f621bd2af090bf66bf7155d1beb5f https://www.encodeproject.org/files/ENCFF228IAW/@@download/ENCFF228IAW.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF350CFH bigBed narrowPeak peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF917LAZ 11374081 ENCODE Processing Pipeline aec6db3a6f1746a340cb93d56b0e92eb https://www.encodeproject.org/files/ENCFF350CFH/@@download/ENCFF350CFH.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF991GTC bed narrowPeak conservative idr thresholded peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF528DYD, ENCFF904DSP, ENCFF917LAZ 700763 ENCODE Processing Pipeline 6356e07b2db067c40ffdc3bd884d3192 https://www.encodeproject.org/files/ENCFF991GTC/@@download/ENCFF991GTC.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF821AQO bed narrowPeak optimal idr thresholded peaks ENCSR000BNH ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF528DYD, ENCFF904DSP, ENCFF917LAZ 896598 ENCODE Processing Pipeline 6b8cb10006e54394256ba65597a853c4 https://www.encodeproject.org/files/ENCFF821AQO/@@download/ENCFF821AQO.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF572ILR fastq reads ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1487546557 Richard Myers, HAIB e546d8068240704042bb073ab5965521 SRA:SRR5331634 https://www.encodeproject.org/files/ENCFF572ILR/@@download/ENCFF572ILR.fastq.gz HiSeq 2000 /files/ENCFF158AFC/ released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF946YUW fastq reads ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1129854692 Richard Myers, HAIB 1243ada07163cd6c497a721430446fa6 SRA:SRR5331635 https://www.encodeproject.org/files/ENCFF946YUW/@@download/ENCFF946YUW.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF679HGX bam alignments ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF946YUW 902635311 ENCODE Processing Pipeline 60cb2508d4df87d98e8e405a956afad3 https://www.encodeproject.org/files/ENCFF679HGX/@@download/ENCFF679HGX.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF509HEN bam alignments ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 50 ENCFF572ILR, ENCFF807MUK 1241164875 ENCODE Processing Pipeline bd7a82e082076e15490a8c859c3ac549 https://www.encodeproject.org/files/ENCFF509HEN/@@download/ENCFF509HEN.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF903KIH bed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF359TIO, ENCFF509HEN, ENCFF679HGX, ENCFF991UTU 6930061 ENCODE Processing Pipeline 8ef9dc98da53c3a9dc38f185b8dbcb10 https://www.encodeproject.org/files/ENCFF903KIH/@@download/ENCFF903KIH.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF658ZSM bigWig signal p-value ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 ENCFF679HGX, ENCFF991UTU 565920269 ENCODE Processing Pipeline 2eec99721f5a6ff528e7f65963101469 https://www.encodeproject.org/files/ENCFF658ZSM/@@download/ENCFF658ZSM.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF225XDH bed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 ENCFF679HGX, ENCFF991UTU 5589494 ENCODE Processing Pipeline 76ffd2dbee137855d63fc7369ff33c6c https://www.encodeproject.org/files/ENCFF225XDH/@@download/ENCFF225XDH.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF407JBN bed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF509HEN 5965134 ENCODE Processing Pipeline 27452cd06f2a29eb47a384396a5eea1e https://www.encodeproject.org/files/ENCFF407JBN/@@download/ENCFF407JBN.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF664PAV bigWig signal p-value ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF509HEN 725069467 ENCODE Processing Pipeline 20955efa8c2eb8efa16226f15e96c33d https://www.encodeproject.org/files/ENCFF664PAV/@@download/ENCFF664PAV.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF402RDL bigWig signal p-value ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF359TIO, ENCFF509HEN, ENCFF679HGX, ENCFF991UTU 1206095024 ENCODE Processing Pipeline 48e28a1679258bb1ff6786c6afb0622f https://www.encodeproject.org/files/ENCFF402RDL/@@download/ENCFF402RDL.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF688EXM bigWig fold change over control ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF359TIO, ENCFF509HEN, ENCFF679HGX, ENCFF991UTU 1176092114 ENCODE Processing Pipeline 306c8c294fb3aa06689003aa29b92005 https://www.encodeproject.org/files/ENCFF688EXM/@@download/ENCFF688EXM.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF038QAZ bigBed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 ENCFF407JBN 13384859 ENCODE Processing Pipeline c4007d51c5d090aefbedef8c317e579b https://www.encodeproject.org/files/ENCFF038QAZ/@@download/ENCFF038QAZ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF209WNJ bigWig fold change over control ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 ENCFF679HGX, ENCFF991UTU 504883010 ENCODE Processing Pipeline c39f1d154a29bc04ceca92d2a44a6c6d https://www.encodeproject.org/files/ENCFF209WNJ/@@download/ENCFF209WNJ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF406ZCR bigBed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 ENCFF225XDH 13403759 ENCODE Processing Pipeline 2aaaf45516786cd4821e9f8a4d3426cd https://www.encodeproject.org/files/ENCFF406ZCR/@@download/ENCFF406ZCR.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF039AEC bigBed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF903KIH 13318328 ENCODE Processing Pipeline 6d76ccbd82c7977339358ae2c190a383 https://www.encodeproject.org/files/ENCFF039AEC/@@download/ENCFF039AEC.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF712MOA bigWig fold change over control ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF509HEN 580318142 ENCODE Processing Pipeline 6a65396bf3e789a2bb706446feb3d1cb https://www.encodeproject.org/files/ENCFF712MOA/@@download/ENCFF712MOA.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF032LOP bam unfiltered alignments ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 50 ENCFF572ILR, ENCFF643CGH 1662956973 ENCODE Processing Pipeline 7f00a9a78bba0016a1949942eef027c9 https://www.encodeproject.org/files/ENCFF032LOP/@@download/ENCFF032LOP.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF123EQA bam unfiltered alignments ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF946YUW 1253286706 ENCODE Processing Pipeline cd9f268dafb548d5fb261ba47fc1cfe7 https://www.encodeproject.org/files/ENCFF123EQA/@@download/ENCFF123EQA.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF007QLT bam alignments ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF946YUW 902698626 ENCODE Processing Pipeline 0c51fadab7c629225bcb73d4c1b9d609 https://www.encodeproject.org/files/ENCFF007QLT/@@download/ENCFF007QLT.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF661OJT bam alignments ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 50 ENCFF572ILR, ENCFF643CGH 1241300465 ENCODE Processing Pipeline 44e93caeb21013f860bd4d38bf2fb51a https://www.encodeproject.org/files/ENCFF661OJT/@@download/ENCFF661OJT.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF554DRV bigWig signal p-value ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 ENCFF661OJT, ENCFF985NSN 577643646 ENCODE Processing Pipeline 4d9947b25f6a988a35dc0b70fa1f6af8 https://www.encodeproject.org/files/ENCFF554DRV/@@download/ENCFF554DRV.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF417XKZ bigWig signal p-value ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 ENCFF007QLT, ENCFF370PSF 499526691 ENCODE Processing Pipeline 1decfb3a5f6981b48a9adfcc5fdc2e8c https://www.encodeproject.org/files/ENCFF417XKZ/@@download/ENCFF417XKZ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF662VRT bigWig fold change over control ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF007QLT, ENCFF370PSF, ENCFF661OJT, ENCFF985NSN 1186072284 ENCODE Processing Pipeline ceef37e8fb89493bf983871986169fbb https://www.encodeproject.org/files/ENCFF662VRT/@@download/ENCFF662VRT.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF168EOV bigBed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 ENCFF777TAV 13382765 ENCODE Processing Pipeline a543e55b7ea47f49fde95e3ebc069170 https://www.encodeproject.org/files/ENCFF168EOV/@@download/ENCFF168EOV.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF658YIM bigWig fold change over control ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 ENCFF661OJT, ENCFF985NSN 583530737 ENCODE Processing Pipeline 4d44ab22126e1714471dd8013d58e7d1 https://www.encodeproject.org/files/ENCFF658YIM/@@download/ENCFF658YIM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF994NGF bed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 ENCFF661OJT, ENCFF985NSN 5717140 ENCODE Processing Pipeline f1a78bd366ef89bb3ebb5bbc08d66f31 https://www.encodeproject.org/files/ENCFF994NGF/@@download/ENCFF994NGF.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF150OOU bigWig signal p-value ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF007QLT, ENCFF370PSF, ENCFF661OJT, ENCFF985NSN 1108271704 ENCODE Processing Pipeline 07dad2d20a7ef72b0de1c21aec5c9d04 https://www.encodeproject.org/files/ENCFF150OOU/@@download/ENCFF150OOU.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF977MOV bed narrowPeak conservative idr thresholded peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF777TAV, ENCFF782XGQ, ENCFF994NGF 253604 ENCODE Processing Pipeline a1b4e1fb75ab874cb6678ebbe8b83d53 https://www.encodeproject.org/files/ENCFF977MOV/@@download/ENCFF977MOV.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF304XON bigBed narrowPeak conservative idr thresholded peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF977MOV 664549 ENCODE Processing Pipeline eebcd74e7e13884ba03c534e35e89cb7 https://www.encodeproject.org/files/ENCFF304XON/@@download/ENCFF304XON.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF343PUR bigWig fold change over control ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 ENCFF007QLT, ENCFF370PSF 507076444 ENCODE Processing Pipeline f92b4d75d156318f1194b4bc0418aa88 https://www.encodeproject.org/files/ENCFF343PUR/@@download/ENCFF343PUR.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF777TAV bed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 ENCFF007QLT, ENCFF370PSF 5384580 ENCODE Processing Pipeline 0c58c4b2df489b1b24b19c72c6d08058 https://www.encodeproject.org/files/ENCFF777TAV/@@download/ENCFF777TAV.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF782XGQ bed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF007QLT, ENCFF370PSF, ENCFF661OJT, ENCFF985NSN 6769710 ENCODE Processing Pipeline d57597af4690c9f30bd56ad01244eb29 https://www.encodeproject.org/files/ENCFF782XGQ/@@download/ENCFF782XGQ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF039LVN bigBed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 ENCFF994NGF 13385484 ENCODE Processing Pipeline 11609765e8613e6fe9db919eb6e40724 https://www.encodeproject.org/files/ENCFF039LVN/@@download/ENCFF039LVN.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF383NRF bigBed narrowPeak peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF782XGQ 13338017 ENCODE Processing Pipeline 6c4972fe81f515dd7220ebb20c791c8d https://www.encodeproject.org/files/ENCFF383NRF/@@download/ENCFF383NRF.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF214OJW bed narrowPeak optimal idr thresholded peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF777TAV, ENCFF782XGQ, ENCFF994NGF 276432 ENCODE Processing Pipeline 3853489bcbb072f701882fce6a6c48c0 https://www.encodeproject.org/files/ENCFF214OJW/@@download/ENCFF214OJW.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF198BFX bigBed narrowPeak optimal idr thresholded peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF214OJW 712994 ENCODE Processing Pipeline 654d860f92314db55f87767036a41cf1 https://www.encodeproject.org/files/ENCFF198BFX/@@download/ENCFF198BFX.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF195UXI bam unfiltered alignments ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1 50 ENCFF572ILR, ENCFF807MUK 1654151238 ENCODE Processing Pipeline dbc50c3d1a8f79a0ee5ad9b6b9549699 https://www.encodeproject.org/files/ENCFF195UXI/@@download/ENCFF195UXI.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF529TFX bam unfiltered alignments ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF946YUW 1246497379 ENCODE Processing Pipeline b98be179dacda8ff4f5888c38f55454d https://www.encodeproject.org/files/ENCFF529TFX/@@download/ENCFF529TFX.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF151OYY bed narrowPeak conservative idr thresholded peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF225XDH, ENCFF407JBN, ENCFF903KIH 220928 ENCODE Processing Pipeline dc91a1eee935d085a6d1b75db21039b6 https://www.encodeproject.org/files/ENCFF151OYY/@@download/ENCFF151OYY.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF739PUT bed narrowPeak optimal idr thresholded peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF225XDH, ENCFF407JBN, ENCFF903KIH 240640 ENCODE Processing Pipeline 0de78ae36c8572df537336ab5bdb9f6d https://www.encodeproject.org/files/ENCFF739PUT/@@download/ENCFF739PUT.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF180MKB bigBed narrowPeak conservative idr thresholded peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF151OYY 510918 ENCODE Processing Pipeline 348dc6150bcc6b8b6bcc4d3ad91a27ca https://www.encodeproject.org/files/ENCFF180MKB/@@download/ENCFF180MKB.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF635KVN bigBed narrowPeak optimal idr thresholded peaks ENCSR016BMM ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens TAF1-human ENCAB000ALM DNA False 2016-06-30 ENCODE 1, 2 ENCFF739PUT 544769 ENCODE Processing Pipeline e96909f4c125041987f53fc4f66728c3 https://www.encodeproject.org/files/ENCFF635KVN/@@download/ENCFF635KVN.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF432PVW fastq reads ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 1 50 single-ended 985298493 Richard Myers, HAIB df12188ddfac61c326f356387724c8c8 SRA:SRR6212604 https://www.encodeproject.org/files/ENCFF432PVW/@@download/ENCFF432PVW.fastq.gz HiSeq 2000 /files/ENCFF158AFC/ released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF360HUQ fastq reads ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 1 50 single-ended 854410046 Richard Myers, HAIB d8faeacdbf011c2c9bcce28e5bee11e7 SRA:SRR6212603 https://www.encodeproject.org/files/ENCFF360HUQ/@@download/ENCFF360HUQ.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF209IUI bigWig signal p-value ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF224HMM, ENCFF991UTU 480034429 ENCODE Processing Pipeline 314ca8cf49a5100d48ef077a5a3f7abd https://www.encodeproject.org/files/ENCFF209IUI/@@download/ENCFF209IUI.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF971KQC bigWig fold change over control ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF224HMM, ENCFF991UTU 442438929 ENCODE Processing Pipeline f18db663fc252cc758ed4574634ec8d5 https://www.encodeproject.org/files/ENCFF971KQC/@@download/ENCFF971KQC.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF302NXP bigWig signal p-value ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF460ORU 455651925 ENCODE Processing Pipeline 63c785cf9c5e2727b367044983d66d16 https://www.encodeproject.org/files/ENCFF302NXP/@@download/ENCFF302NXP.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF175FEQ bigWig fold change over control ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF460ORU 342627517 ENCODE Processing Pipeline 4a896182202f8f86bf1f532d33c0add7 https://www.encodeproject.org/files/ENCFF175FEQ/@@download/ENCFF175FEQ.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF858DYE bam unfiltered alignments ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 50 ENCFF360HUQ, ENCFF643CGH 943381458 ENCODE Processing Pipeline 2a6d12a0157f0e2251e67e85da7f3fd4 https://www.encodeproject.org/files/ENCFF858DYE/@@download/ENCFF858DYE.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF002ZVX bam unfiltered alignments ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 50 ENCFF432PVW, ENCFF643CGH 1041670235 ENCODE Processing Pipeline ec4954982998de94ed0644bfa12831a1 https://www.encodeproject.org/files/ENCFF002ZVX/@@download/ENCFF002ZVX.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF943YXO bam alignments ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 50 ENCFF360HUQ, ENCFF643CGH 708919716 ENCODE Processing Pipeline 83e6ad79a1a1af8612ce88c028ad39e1 https://www.encodeproject.org/files/ENCFF943YXO/@@download/ENCFF943YXO.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF648XID bam alignments ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 50 ENCFF432PVW, ENCFF643CGH 593224117 ENCODE Processing Pipeline 15efca832fefc2dfc37a0f8c26dcb7f9 https://www.encodeproject.org/files/ENCFF648XID/@@download/ENCFF648XID.bam GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF144DIV bigWig signal p-value ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF648XID, ENCFF985NSN 431647391 ENCODE Processing Pipeline 2298fcd7ad25cd5b82c81cddf765b43e https://www.encodeproject.org/files/ENCFF144DIV/@@download/ENCFF144DIV.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF839VZH bigWig signal p-value ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF943YXO 522566264 ENCODE Processing Pipeline 7ce63da7c2ba9f25e58077b1229a37bc https://www.encodeproject.org/files/ENCFF839VZH/@@download/ENCFF839VZH.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF112DHJ bigWig signal p-value ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF648XID, ENCFF943YXO, ENCFF985NSN 844893968 ENCODE Processing Pipeline 6455521db913d421c8236f08999185a4 https://www.encodeproject.org/files/ENCFF112DHJ/@@download/ENCFF112DHJ.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF915RRJ bed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF648XID, ENCFF985NSN 4958113 ENCODE Processing Pipeline 9e35f7b045abc266ab7027c36f699436 https://www.encodeproject.org/files/ENCFF915RRJ/@@download/ENCFF915RRJ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF299LHP bigBed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF915RRJ 10998699 ENCODE Processing Pipeline 186f586c35de46ff4edd998e46be5ccc https://www.encodeproject.org/files/ENCFF299LHP/@@download/ENCFF299LHP.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF974JGA bigBed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF028HOI 11178037 ENCODE Processing Pipeline f21c6d462846cc4ffb47e8bb8752d620 https://www.encodeproject.org/files/ENCFF974JGA/@@download/ENCFF974JGA.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF754HCO bigBed narrowPeak conservative idr thresholded peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF940TMU 581569 ENCODE Processing Pipeline c67bc59d5cd81cbb88b30b2de9326c08 https://www.encodeproject.org/files/ENCFF754HCO/@@download/ENCFF754HCO.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF245GPL bigWig fold change over control ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF943YXO 442115315 ENCODE Processing Pipeline 127f1e3f618a6a11c19a9286f7f9d4f2 https://www.encodeproject.org/files/ENCFF245GPL/@@download/ENCFF245GPL.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF841CBQ bed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF648XID, ENCFF943YXO, ENCFF985NSN 5968653 ENCODE Processing Pipeline 6ab883c3c7d37c8752b8b43b036a5b8e https://www.encodeproject.org/files/ENCFF841CBQ/@@download/ENCFF841CBQ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF425XJN bigWig fold change over control ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF648XID, ENCFF985NSN 344872962 ENCODE Processing Pipeline cc0755754cae93ed8b66d4c9e5458323 https://www.encodeproject.org/files/ENCFF425XJN/@@download/ENCFF425XJN.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF028HOI bed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF943YXO 5047575 ENCODE Processing Pipeline e5399ba0ae6f08b2f0944d765eb90700 https://www.encodeproject.org/files/ENCFF028HOI/@@download/ENCFF028HOI.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF940TMU bed narrowPeak conservative idr thresholded peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF028HOI, ENCFF419RSJ, ENCFF841CBQ, ENCFF915RRJ 280910 ENCODE Processing Pipeline fa04a930780846c9b1f133edffaa240c https://www.encodeproject.org/files/ENCFF940TMU/@@download/ENCFF940TMU.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF293LRQ bed narrowPeak optimal idr thresholded peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF028HOI, ENCFF419RSJ, ENCFF841CBQ, ENCFF915RRJ 475503 ENCODE Processing Pipeline 0a0a6a47a0178cd34b4ac8bbcf369981 https://www.encodeproject.org/files/ENCFF293LRQ/@@download/ENCFF293LRQ.bed.gz GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF574PCV bigWig fold change over control ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF648XID, ENCFF943YXO, ENCFF985NSN 878627666 ENCODE Processing Pipeline 7ca9b82d34e8da4591f92f93be752f69 https://www.encodeproject.org/files/ENCFF574PCV/@@download/ENCFF574PCV.bigWig GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF873JJO bigBed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF841CBQ 11590466 ENCODE Processing Pipeline a515d040e2cf21734f2e6e79fc6044be https://www.encodeproject.org/files/ENCFF873JJO/@@download/ENCFF873JJO.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF930NJB bigBed narrowPeak optimal idr thresholded peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF293LRQ 846407 ENCODE Processing Pipeline 431229b8e18daa5d82599695be2ea36f https://www.encodeproject.org/files/ENCFF930NJB/@@download/ENCFF930NJB.bigBed GRCh38 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF743FOK bam unfiltered alignments ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 50 ENCFF360HUQ, ENCFF807MUK 938913513 ENCODE Processing Pipeline ca3145e6e25d38f7c35753692a007494 https://www.encodeproject.org/files/ENCFF743FOK/@@download/ENCFF743FOK.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF224HMM bam alignments ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 50 ENCFF360HUQ, ENCFF807MUK 708853611 ENCODE Processing Pipeline 4092f6f4e2c6f9d225d1d268b90a0897 https://www.encodeproject.org/files/ENCFF224HMM/@@download/ENCFF224HMM.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF460ORU bam alignments ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 50 ENCFF432PVW, ENCFF807MUK 593265961 ENCODE Processing Pipeline ccff9e3b168897e603a029ac5ed1aae1 https://www.encodeproject.org/files/ENCFF460ORU/@@download/ENCFF460ORU.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF067HKM bam unfiltered alignments ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 50 ENCFF432PVW, ENCFF807MUK 1037254382 ENCODE Processing Pipeline cea4ac048cce57980311227229e1f838 https://www.encodeproject.org/files/ENCFF067HKM/@@download/ENCFF067HKM.bam hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF216JDJ bed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF224HMM, ENCFF359TIO, ENCFF460ORU, ENCFF991UTU 5969434 ENCODE Processing Pipeline 0e5a643529c92c22ffd909fb5a08a7ec https://www.encodeproject.org/files/ENCFF216JDJ/@@download/ENCFF216JDJ.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF822WGO bigBed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF539QIT 11121069 ENCODE Processing Pipeline 21934f1514a9b0a08923c7e3ed59cd46 https://www.encodeproject.org/files/ENCFF822WGO/@@download/ENCFF822WGO.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF539QIT bed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 2 ENCFF224HMM, ENCFF991UTU 5006850 ENCODE Processing Pipeline 3000419cc1a9289e4a24a47454b3aee7 https://www.encodeproject.org/files/ENCFF539QIT/@@download/ENCFF539QIT.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF076ZDI bigBed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF216JDJ 11584304 ENCODE Processing Pipeline 83d0107ac7f8e632f9032da4751c9301 https://www.encodeproject.org/files/ENCFF076ZDI/@@download/ENCFF076ZDI.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF344EDE bed narrowPeak optimal idr thresholded peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF216JDJ, ENCFF539QIT, ENCFF555YAB 474546 ENCODE Processing Pipeline d3e6b822f6c76b83e10faeeac4e38d0c https://www.encodeproject.org/files/ENCFF344EDE/@@download/ENCFF344EDE.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF740DCD bigBed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF555YAB 11000712 ENCODE Processing Pipeline db72b8af732cc047764a557746d101e8 https://www.encodeproject.org/files/ENCFF740DCD/@@download/ENCFF740DCD.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF295GBJ bed narrowPeak conservative idr thresholded peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF216JDJ, ENCFF539QIT, ENCFF555YAB 280581 ENCODE Processing Pipeline bd3828d3a0086fe72bf09ae8f81cfb36 https://www.encodeproject.org/files/ENCFF295GBJ/@@download/ENCFF295GBJ.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF378LRA bigWig signal p-value ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF224HMM, ENCFF359TIO, ENCFF460ORU, ENCFF991UTU 900995961 ENCODE Processing Pipeline 9e1b93a8e2c3dd594cbc1868ef8bda4e https://www.encodeproject.org/files/ENCFF378LRA/@@download/ENCFF378LRA.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF555YAB bed narrowPeak peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1 ENCFF359TIO, ENCFF460ORU 4994489 ENCODE Processing Pipeline c37fc9bf8e4fcbe2205e5a2f3a31c539 https://www.encodeproject.org/files/ENCFF555YAB/@@download/ENCFF555YAB.bed.gz hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF746XYY bigBed narrowPeak conservative idr thresholded peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF295GBJ 581252 ENCODE Processing Pipeline 00c0db051cd82839ae458535f1a761f2 https://www.encodeproject.org/files/ENCFF746XYY/@@download/ENCFF746XYY.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF811LJC bigBed narrowPeak optimal idr thresholded peaks ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF344EDE 844192 ENCODE Processing Pipeline 0655d7d178b7e7f78e3605237a007175 https://www.encodeproject.org/files/ENCFF811LJC/@@download/ENCFF811LJC.bigBed hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF965MSA bigWig fold change over control ENCSR080XEY ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens FOXA2-human ENCAB000AGO DNA False 2016-06-30 ENCODE 1, 2 ENCFF224HMM, ENCFF359TIO, ENCFF460ORU, ENCFF991UTU 887486318 ENCODE Processing Pipeline 9ee1ee3e6740109cb45a29ab80e14978 https://www.encodeproject.org/files/ENCFF965MSA/@@download/ENCFF965MSA.bigWig hg19 released mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000PTZ bam alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000PUJ 1267407258 Richard Myers, HAIB 7a78b2ae3631d75258630e6cf7858a5e https://www.encodeproject.org/files/ENCFF000PTZ/@@download/ENCFF000PTZ.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000PUA bigBed broadPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UIO 649604 Richard Myers, HAIB 4dd258e4924e9c82d25db30361b93d4c https://www.encodeproject.org/files/ENCFF000PUA/@@download/ENCFF000PUA.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000PUB bigBed broadPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UIP 900941 Richard Myers, HAIB 8121ee60cbdee20d5b58e06b7691141d https://www.encodeproject.org/files/ENCFF000PUB/@@download/ENCFF000PUB.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000PUC bam alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000PUI 1013863140 Richard Myers, HAIB c3b97b62ed404f42fd8a3cddfe787e36 https://www.encodeproject.org/files/ENCFF000PUC/@@download/ENCFF000PUC.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000PUE bigWig raw signal ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 1 150585822 Richard Myers, HAIB 6b305e12dfa0d48a50646058adba65f0 https://www.encodeproject.org/files/ENCFF000PUE/@@download/ENCFF000PUE.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000PUF bigWig raw signal ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 1 137848623 Richard Myers, HAIB b31a24a1fc1a334f87f503e5656ab883 https://www.encodeproject.org/files/ENCFF000PUF/@@download/ENCFF000PUF.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000PUI fastq reads ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1081288830 Richard Myers, HAIB 616805fb1b199b1924ee11dc48155e8b https://www.encodeproject.org/files/ENCFF000PUI/@@download/ENCFF000PUI.fastq.gz HiSeq 2000 /files/ENCFF000PVC/ released low read depth biological replicates with identical biosample ENCFF000PUJ fastq reads ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1306465462 Richard Myers, HAIB 817e6b01150d27884f0f9c89dde36937 https://www.encodeproject.org/files/ENCFF000PUJ/@@download/ENCFF000PUJ.fastq.gz HiSeq 2000 /files/ENCFF000PVC/ released low read depth biological replicates with identical biosample ENCFF001UIO bed broadPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 1 344762 Richard Myers, HAIB 982246c02556302f2620d5208f246081 https://www.encodeproject.org/files/ENCFF001UIO/@@download/ENCFF001UIO.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF001UIP bed broadPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 1 561060 Richard Myers, HAIB e5b4ebff459229ac2fa1362ad32ac940 https://www.encodeproject.org/files/ENCFF001UIP/@@download/ENCFF001UIP.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF351FZG bam unfiltered alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUJ, ENCFF643CGH 1370378155 ENCODE Processing Pipeline 79c661b3a0fe3a4bc137d92a85003f33 https://www.encodeproject.org/files/ENCFF351FZG/@@download/ENCFF351FZG.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF794LFP bam unfiltered alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUI, ENCFF643CGH 1106004583 ENCODE Processing Pipeline cd9db0d406f9544f855449b9aa30f5d6 https://www.encodeproject.org/files/ENCFF794LFP/@@download/ENCFF794LFP.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF721MRE bam alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUJ, ENCFF643CGH 1063217439 ENCODE Processing Pipeline fc51c1b67a25cc7dee62d3c011fa66c4 https://www.encodeproject.org/files/ENCFF721MRE/@@download/ENCFF721MRE.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF668VZA bam alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUI, ENCFF643CGH 797206765 ENCODE Processing Pipeline 648bac8be70ecbcac741f47afb87f4b4 https://www.encodeproject.org/files/ENCFF668VZA/@@download/ENCFF668VZA.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF522NKK bam alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUI, ENCFF807MUK 797544118 ENCODE Processing Pipeline 1f0842f9d3befe43eb05abb8e7dd7ef7 https://www.encodeproject.org/files/ENCFF522NKK/@@download/ENCFF522NKK.bam hg19 released low read depth biological replicates with identical biosample ENCFF860HGF bam unfiltered alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUJ, ENCFF807MUK 1367149564 ENCODE Processing Pipeline b59b2b1951f5dd8f15408384ec4404b0 https://www.encodeproject.org/files/ENCFF860HGF/@@download/ENCFF860HGF.bam hg19 released low read depth biological replicates with identical biosample ENCFF052RMO bam alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUJ, ENCFF807MUK 1063295458 ENCODE Processing Pipeline 0e2586d38072797fdd4d69443c45e734 https://www.encodeproject.org/files/ENCFF052RMO/@@download/ENCFF052RMO.bam hg19 released low read depth biological replicates with identical biosample ENCFF428UAA bam unfiltered alignments ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUI, ENCFF807MUK 1104919539 ENCODE Processing Pipeline 0fba6f97cbbac84a3b7e8a0b1d48ab5d https://www.encodeproject.org/files/ENCFF428UAA/@@download/ENCFF428UAA.bam hg19 released low read depth biological replicates with identical biosample ENCFF494QRC bigWig signal p-value ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF052RMO, ENCFF880DIZ 561310035 ENCODE Processing Pipeline 46423a39408b6d55dfc833376d7215c4 https://www.encodeproject.org/files/ENCFF494QRC/@@download/ENCFF494QRC.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF074QRH bigWig fold change over control ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF052RMO, ENCFF880DIZ 412545502 ENCODE Processing Pipeline 11fe7449f8d74f17be47043004777d8b https://www.encodeproject.org/files/ENCFF074QRH/@@download/ENCFF074QRH.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF304QFS bed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF052RMO, ENCFF522NKK, ENCFF880DIZ 6809898 ENCODE Processing Pipeline 06a500b8e378f7af2bba2fb1a6882e29 https://www.encodeproject.org/files/ENCFF304QFS/@@download/ENCFF304QFS.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF292TPG bigBed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF205TFY 12763814 ENCODE Processing Pipeline 47745151b807547eea6ed509b47561fe https://www.encodeproject.org/files/ENCFF292TPG/@@download/ENCFF292TPG.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF809LXT bigBed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF154RFF 12144741 ENCODE Processing Pipeline b9330723b5b01ff950dd3ad4730a0816 https://www.encodeproject.org/files/ENCFF809LXT/@@download/ENCFF809LXT.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF648MQI bed narrowPeak conservative idr thresholded peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF154RFF, ENCFF205TFY, ENCFF304QFS 509199 ENCODE Processing Pipeline 81f479376dbd41485a557fce1f069446 https://www.encodeproject.org/files/ENCFF648MQI/@@download/ENCFF648MQI.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF205TFY bed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF052RMO, ENCFF880DIZ 6292088 ENCODE Processing Pipeline 0f455ffd056fa8375ad3a8a18bc2f9e5 https://www.encodeproject.org/files/ENCFF205TFY/@@download/ENCFF205TFY.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF727ZEG bigWig fold change over control ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF052RMO, ENCFF522NKK, ENCFF880DIZ 594478523 ENCODE Processing Pipeline 862eadce9e1d87dcd96d165178c4cd59 https://www.encodeproject.org/files/ENCFF727ZEG/@@download/ENCFF727ZEG.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF989CWG bigWig signal p-value ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF522NKK, ENCFF880DIZ 422407139 ENCODE Processing Pipeline db81fd625e245a342f5b4ef71aa8220e https://www.encodeproject.org/files/ENCFF989CWG/@@download/ENCFF989CWG.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF122JZJ bigWig signal p-value ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF052RMO, ENCFF522NKK, ENCFF880DIZ 510957942 ENCODE Processing Pipeline dec99f417eb47831762f6a963f644946 https://www.encodeproject.org/files/ENCFF122JZJ/@@download/ENCFF122JZJ.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF863IPV bigWig fold change over control ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF522NKK, ENCFF880DIZ 279687618 ENCODE Processing Pipeline 43125fadc8470246138a1db3266578b2 https://www.encodeproject.org/files/ENCFF863IPV/@@download/ENCFF863IPV.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF154RFF bed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF522NKK, ENCFF880DIZ 6253602 ENCODE Processing Pipeline bb6744858026875ff2562421bb32a47b https://www.encodeproject.org/files/ENCFF154RFF/@@download/ENCFF154RFF.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF112LTI bigBed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF304QFS 12423375 ENCODE Processing Pipeline 05185e9841e4590f34f7d0c821b3644b https://www.encodeproject.org/files/ENCFF112LTI/@@download/ENCFF112LTI.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF332IKL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF648MQI 967577 ENCODE Processing Pipeline 2f669fb41f20b2230e5ed19e9b933b0e https://www.encodeproject.org/files/ENCFF332IKL/@@download/ENCFF332IKL.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF298QJB bed narrowPeak optimal idr thresholded peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF154RFF, ENCFF205TFY, ENCFF304QFS 604130 ENCODE Processing Pipeline c5f0f633fc962eb133e299133f0e3ed8 https://www.encodeproject.org/files/ENCFF298QJB/@@download/ENCFF298QJB.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF199PDD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF298QJB 1354679 ENCODE Processing Pipeline 1687c839fadd66b8f5e8261a12e94811 https://www.encodeproject.org/files/ENCFF199PDD/@@download/ENCFF199PDD.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF497QFB bigWig signal p-value ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF668VZA, ENCFF721MRE, ENCFF895MWF 510967161 ENCODE Processing Pipeline 5f5cc7c4b51275b68de1f85b037482d2 https://www.encodeproject.org/files/ENCFF497QFB/@@download/ENCFF497QFB.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF166DXT bed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF668VZA, ENCFF721MRE, ENCFF895MWF 6810402 ENCODE Processing Pipeline d611b29c378e888706254a3b79b92b9f https://www.encodeproject.org/files/ENCFF166DXT/@@download/ENCFF166DXT.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF711BKQ bigBed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF706NTX 12762710 ENCODE Processing Pipeline e09deaf6e934fa687c4bb7b868759577 https://www.encodeproject.org/files/ENCFF711BKQ/@@download/ENCFF711BKQ.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF305FUT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF445GRG 973130 ENCODE Processing Pipeline 5dfb2bd8c8d14c0a5525126024c0dd96 https://www.encodeproject.org/files/ENCFF305FUT/@@download/ENCFF305FUT.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF612PEJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF453CCW 1355539 ENCODE Processing Pipeline f6df22ad0b468e020481484e010a0152 https://www.encodeproject.org/files/ENCFF612PEJ/@@download/ENCFF612PEJ.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF408VIT bigWig fold change over control ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF668VZA, ENCFF895MWF 277069032 ENCODE Processing Pipeline 3b0bcd75889657e2e6571c5313c00531 https://www.encodeproject.org/files/ENCFF408VIT/@@download/ENCFF408VIT.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF706NTX bed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF721MRE, ENCFF895MWF 6260900 ENCODE Processing Pipeline 6c3d4c05efd6f7c29f710ebf0a710fee https://www.encodeproject.org/files/ENCFF706NTX/@@download/ENCFF706NTX.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF213FKO bed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF668VZA, ENCFF895MWF 6255336 ENCODE Processing Pipeline 9e770d41a9bf603dd028c56075a22a34 https://www.encodeproject.org/files/ENCFF213FKO/@@download/ENCFF213FKO.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF453CCW bed narrowPeak optimal idr thresholded peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF166DXT, ENCFF213FKO, ENCFF419RSJ, ENCFF706NTX 603977 ENCODE Processing Pipeline 2799c870e0f41e4491f0d42efb2c4efc https://www.encodeproject.org/files/ENCFF453CCW/@@download/ENCFF453CCW.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF340QWF bigWig signal p-value ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF668VZA, ENCFF895MWF 427277313 ENCODE Processing Pipeline 129b7287f27b32f85be7129532ed1515 https://www.encodeproject.org/files/ENCFF340QWF/@@download/ENCFF340QWF.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF886LIS bigBed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 2 ENCFF213FKO 12145076 ENCODE Processing Pipeline 6dde46f82ede47a67d6f85ec65b4f49e https://www.encodeproject.org/files/ENCFF886LIS/@@download/ENCFF886LIS.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF044XMQ bigWig fold change over control ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF721MRE, ENCFF895MWF 410221862 ENCODE Processing Pipeline 636687b0ccdaf9bc66fbf632c3034cd7 https://www.encodeproject.org/files/ENCFF044XMQ/@@download/ENCFF044XMQ.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF689VDW bigBed narrowPeak peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF166DXT 12426496 ENCODE Processing Pipeline 2600bd37d2143adb73faaaeac462dfb8 https://www.encodeproject.org/files/ENCFF689VDW/@@download/ENCFF689VDW.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF447IAN bigWig signal p-value ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1 ENCFF721MRE, ENCFF895MWF 474035844 ENCODE Processing Pipeline 1366889a1b3caea05bbb9132cbf39fa6 https://www.encodeproject.org/files/ENCFF447IAN/@@download/ENCFF447IAN.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF771XTJ bigWig fold change over control ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF668VZA, ENCFF721MRE, ENCFF895MWF 589780084 ENCODE Processing Pipeline b142d4cefa3c41055cbd331b0d4962a8 https://www.encodeproject.org/files/ENCFF771XTJ/@@download/ENCFF771XTJ.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF445GRG bed narrowPeak conservative idr thresholded peaks ENCSR000BTL ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF166DXT, ENCFF213FKO, ENCFF419RSJ, ENCFF706NTX 512542 ENCODE Processing Pipeline 56fb07d21f5827baf5a6ad803d09f847 https://www.encodeproject.org/files/ENCFF445GRG/@@download/ENCFF445GRG.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF000PWN bigBed broadPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UJC 1270457 Richard Myers, HAIB 11fa906b2efbb795177d11991d69f831 https://www.encodeproject.org/files/ENCFF000PWN/@@download/ENCFF000PWN.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000PWO bigBed broadPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UJD 473181 Richard Myers, HAIB 422bd845e7363a78c94fedc6422bb312 https://www.encodeproject.org/files/ENCFF000PWO/@@download/ENCFF000PWO.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000PWP bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PXA 1866438744 Richard Myers, HAIB 23d62150202f52babc58f627070f4975 https://www.encodeproject.org/files/ENCFF000PWP/@@download/ENCFF000PWP.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000PWQ bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PXB 1780938257 Richard Myers, HAIB 6b1f143272cccc584fc2a52311a11c6b https://www.encodeproject.org/files/ENCFF000PWQ/@@download/ENCFF000PWQ.bam hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000PWR bigWig raw signal ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 1 63189771 Richard Myers, HAIB 162db24316758414b637f6401c442dc3 https://www.encodeproject.org/files/ENCFF000PWR/@@download/ENCFF000PWR.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF000PWS bigWig raw signal ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 1 28552306 Richard Myers, HAIB 73efb5e90fec0b896a11f358fd798ee6 https://www.encodeproject.org/files/ENCFF000PWS/@@download/ENCFF000PWS.bigWig hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF000PXA fastq reads ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1851618159 Richard Myers, HAIB 173d82c37549c7820c744561cb60f503 https://www.encodeproject.org/files/ENCFF000PXA/@@download/ENCFF000PXA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000PXB fastq reads ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1737766650 Richard Myers, HAIB 53ce87e97d51047f811c8d867c18fedf https://www.encodeproject.org/files/ENCFF000PXB/@@download/ENCFF000PXB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF001UJC bed broadPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 1 755568 Richard Myers, HAIB 0680a3e8b22b1807f9780998637981ee https://www.encodeproject.org/files/ENCFF001UJC/@@download/ENCFF001UJC.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF001UJD bed broadPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 1 244531 Richard Myers, HAIB 34e29cd979c51c24a2281844874a386f https://www.encodeproject.org/files/ENCFF001UJD/@@download/ENCFF001UJD.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF002CLQ bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 466076 ENCODE Consortium Analysis Working Group 3995b6b545fecf8ce9fe78928e2563f5 https://www.encodeproject.org/files/ENCFF002CLQ/@@download/ENCFF002CLQ.bed.gz hg19 archived inconsistent platforms, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample ENCFF163PZR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE ENCFF002CLQ 1052105 ENCODE Consortium 930e8de7f3e7435c5e241c40d5dee8e7 https://www.encodeproject.org/files/ENCFF163PZR/@@download/ENCFF163PZR.bigBed hg19 archived inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF093QMN bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXB, ENCFF643CGH 1203989147 ENCODE Processing Pipeline fa7a8809aab0c4542e79d3323b44a1e8 https://www.encodeproject.org/files/ENCFF093QMN/@@download/ENCFF093QMN.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF607PEE bam unfiltered alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXB, ENCFF643CGH 1963005705 ENCODE Processing Pipeline e1e403fabf15efc03871bd8d727fbed6 https://www.encodeproject.org/files/ENCFF607PEE/@@download/ENCFF607PEE.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF971ILL bam unfiltered alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXA, ENCFF643CGH 2053051037 ENCODE Processing Pipeline fb32eaf1ee85b038bdb1592b417817e1 https://www.encodeproject.org/files/ENCFF971ILL/@@download/ENCFF971ILL.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF289RGM bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXA, ENCFF643CGH 1316020814 ENCODE Processing Pipeline ad269b05d0a2e31f14b5d768a01ffcd8 https://www.encodeproject.org/files/ENCFF289RGM/@@download/ENCFF289RGM.bam GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF977GVI bam unfiltered alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXA, ENCFF807MUK 2050213154 ENCODE Processing Pipeline 0323365f583743bbfcc4d93e373b5192 https://www.encodeproject.org/files/ENCFF977GVI/@@download/ENCFF977GVI.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF289YVH bam unfiltered alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXB, ENCFF807MUK 1956275025 ENCODE Processing Pipeline 826a54bdb7731f3869504cbad91e83df https://www.encodeproject.org/files/ENCFF289YVH/@@download/ENCFF289YVH.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF725HAK bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXA, ENCFF807MUK 1316308524 ENCODE Processing Pipeline d246a9cf545c29e2afafc93ffaf574f7 https://www.encodeproject.org/files/ENCFF725HAK/@@download/ENCFF725HAK.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF045NWB bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXB, ENCFF807MUK 1204326321 ENCODE Processing Pipeline b714da8ce6d1dc2f3c9beb9db078b3da https://www.encodeproject.org/files/ENCFF045NWB/@@download/ENCFF045NWB.bam hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF466LDG bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF725HAK 775789555 ENCODE Processing Pipeline 1cdb8b3185f10209ed5e3b97395d3df6 https://www.encodeproject.org/files/ENCFF466LDG/@@download/ENCFF466LDG.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF125FCL bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF289RGM, ENCFF836OEO 656550195 ENCODE Processing Pipeline 1c3c96e242be13e09852b7666296e33c https://www.encodeproject.org/files/ENCFF125FCL/@@download/ENCFF125FCL.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF226YCL bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF045NWB, ENCFF522HDC 777034036 ENCODE Processing Pipeline 8432287fcec0ac14b89bb9f48ff5c6fc https://www.encodeproject.org/files/ENCFF226YCL/@@download/ENCFF226YCL.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF664AQZ bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF045NWB, ENCFF522HDC, ENCFF725HAK 812056828 ENCODE Processing Pipeline 6e53b2f2bc4e855e731a37ea7cc28054 https://www.encodeproject.org/files/ENCFF664AQZ/@@download/ENCFF664AQZ.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF985RCB bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF093QMN, ENCFF836OEO 779052459 ENCODE Processing Pipeline 5410da20c12378b86db89e1092071c6f https://www.encodeproject.org/files/ENCFF985RCB/@@download/ENCFF985RCB.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF036JHJ bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF725HAK 625262504 ENCODE Processing Pipeline 2ebd9b05b47bac0218327d5ff92b8f7f https://www.encodeproject.org/files/ENCFF036JHJ/@@download/ENCFF036JHJ.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF933FTY bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF093QMN, ENCFF289RGM, ENCFF836OEO 831929536 ENCODE Processing Pipeline 8af1123cc808938d2be47d2670ed3d8a https://www.encodeproject.org/files/ENCFF933FTY/@@download/ENCFF933FTY.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF680KQO bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF045NWB, ENCFF522HDC 589041900 ENCODE Processing Pipeline f2adf4b8202755b04379c830eb627943 https://www.encodeproject.org/files/ENCFF680KQO/@@download/ENCFF680KQO.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF630YDI bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF045NWB, ENCFF522HDC, ENCFF725HAK 986725976 ENCODE Processing Pipeline 8558a2830dba52d02856fffdf1069867 https://www.encodeproject.org/files/ENCFF630YDI/@@download/ENCFF630YDI.bigWig hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF399FJD bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF289RGM, ENCFF836OEO 627839816 ENCODE Processing Pipeline baa35eca099c60403ef00cd4dbf40f8d https://www.encodeproject.org/files/ENCFF399FJD/@@download/ENCFF399FJD.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF831QNI bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF725HAK 6882452 ENCODE Processing Pipeline b636262d4059d2227749aab51878ac9d https://www.encodeproject.org/files/ENCFF831QNI/@@download/ENCFF831QNI.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF653UJT bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF045NWB, ENCFF522HDC 6103983 ENCODE Processing Pipeline 7384bf8990c218b47cac769d4470c370 https://www.encodeproject.org/files/ENCFF653UJT/@@download/ENCFF653UJT.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF255QHM bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF093QMN, ENCFF836OEO 584813937 ENCODE Processing Pipeline ecb89dd80e4fd2e0ea68c2b5a95e3878 https://www.encodeproject.org/files/ENCFF255QHM/@@download/ENCFF255QHM.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF064WFD bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF045NWB, ENCFF522HDC, ENCFF725HAK 7028966 ENCODE Processing Pipeline 2671d55a6b2309c18e827d8b9a49f29b https://www.encodeproject.org/files/ENCFF064WFD/@@download/ENCFF064WFD.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF974LAB bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF064WFD 12944098 ENCODE Processing Pipeline c870a86c577e4bbe51648f21d6d7d3b0 https://www.encodeproject.org/files/ENCFF974LAB/@@download/ENCFF974LAB.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF561SEG bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF831QNI 12780872 ENCODE Processing Pipeline 54f17dc580a15fa855a9294d750e168d https://www.encodeproject.org/files/ENCFF561SEG/@@download/ENCFF561SEG.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF012RKG bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF653UJT 13283047 ENCODE Processing Pipeline 46c6b4166760c10b0cebb7ba4c0b68be https://www.encodeproject.org/files/ENCFF012RKG/@@download/ENCFF012RKG.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF692KUW bed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF064WFD, ENCFF653UJT, ENCFF831QNI 325281 ENCODE Processing Pipeline acb123ed11f022aff111eecf80eaa575 https://www.encodeproject.org/files/ENCFF692KUW/@@download/ENCFF692KUW.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF518DVK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF692KUW 697187 ENCODE Processing Pipeline 9f0cd44eba23f3ec5f4d6824d998d0f8 https://www.encodeproject.org/files/ENCFF518DVK/@@download/ENCFF518DVK.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF455TDM bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF064WFD, ENCFF653UJT, ENCFF831QNI 465905 ENCODE Processing Pipeline 5c2ed80d53a4008c80594b13b59766fa https://www.encodeproject.org/files/ENCFF455TDM/@@download/ENCFF455TDM.bed.gz hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF646PFR bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF093QMN, ENCFF289RGM, ENCFF836OEO 1004221305 ENCODE Processing Pipeline a04779a87c467cd4588b0300e094c5b1 https://www.encodeproject.org/files/ENCFF646PFR/@@download/ENCFF646PFR.bigWig GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF570OIT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF455TDM 910980 ENCODE Processing Pipeline 13077c69e1b05e0c696235348cfbbb35 https://www.encodeproject.org/files/ENCFF570OIT/@@download/ENCFF570OIT.bigBed hg19 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF469CQE bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF093QMN, ENCFF289RGM, ENCFF836OEO 7033869 ENCODE Processing Pipeline 9459d9e7a6ba5c6e5c9e13420d233016 https://www.encodeproject.org/files/ENCFF469CQE/@@download/ENCFF469CQE.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF388XAJ bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF469CQE 12938462 ENCODE Processing Pipeline 4b67268ae01203f82af2519ccd46f5da https://www.encodeproject.org/files/ENCFF388XAJ/@@download/ENCFF388XAJ.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF848QNF bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF289RGM, ENCFF836OEO 6843039 ENCODE Processing Pipeline c6395b38e2eb101a6a1b18372a817f7f https://www.encodeproject.org/files/ENCFF848QNF/@@download/ENCFF848QNF.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF275XNU bed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF469CQE, ENCFF725LHJ, ENCFF848QNF 325309 ENCODE Processing Pipeline 11a6b527fa4aa0a41993ef20d1def353 https://www.encodeproject.org/files/ENCFF275XNU/@@download/ENCFF275XNU.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF951BQB bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF469CQE, ENCFF725LHJ, ENCFF848QNF 466486 ENCODE Processing Pipeline a7402798ec5e5c167abce02eb04f525f https://www.encodeproject.org/files/ENCFF951BQB/@@download/ENCFF951BQB.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF940AFO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF951BQB 910672 ENCODE Processing Pipeline 8787a45a0b9f13337e3e7ca08626cd1d https://www.encodeproject.org/files/ENCFF940AFO/@@download/ENCFF940AFO.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF725LHJ bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF093QMN, ENCFF836OEO 6076313 ENCODE Processing Pipeline 9330733615eb556207191e4d69257d4f https://www.encodeproject.org/files/ENCFF725LHJ/@@download/ENCFF725LHJ.bed.gz GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF219LDI bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF848QNF 12767291 ENCODE Processing Pipeline 1648f8f5a96cdde2f7cbe1bf00d39d02 https://www.encodeproject.org/files/ENCFF219LDI/@@download/ENCFF219LDI.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF045ELV bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF725LHJ 13297206 ENCODE Processing Pipeline b1e487a3214167506b49cd333613cb51 https://www.encodeproject.org/files/ENCFF045ELV/@@download/ENCFF045ELV.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF188YLF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF275XNU 697966 ENCODE Processing Pipeline 890527a1e35b44fc24e2939ecc8dcf4e https://www.encodeproject.org/files/ENCFF188YLF/@@download/ENCFF188YLF.bigBed GRCh38 released inconsistent platforms, borderline replicate concordance, low read length biological replicates with identical biosample ENCFF000RHL bam alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RHW 668262815 Richard Myers, HAIB 511387d10fc63f03e3db967e2c7818d1 https://www.encodeproject.org/files/ENCFF000RHL/@@download/ENCFF000RHL.bam hg19 archived low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000RHN bam alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RHV 450542994 Richard Myers, HAIB bb2bdd9b3393a515b94ed10c6574e316 https://www.encodeproject.org/files/ENCFF000RHN/@@download/ENCFF000RHN.bam hg19 archived low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000RHP bigWig raw signal ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 9217161 Richard Myers, HAIB d5fd59a626fd0de5776abf09966bf643 https://www.encodeproject.org/files/ENCFF000RHP/@@download/ENCFF000RHP.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000RHQ bigWig raw signal ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 1341581 Richard Myers, HAIB 063bbf782bd8333e2191ddf940ff7fff https://www.encodeproject.org/files/ENCFF000RHQ/@@download/ENCFF000RHQ.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000RHV fastq reads ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 463880254 Richard Myers, HAIB 5184ed8cfe911f46c4dd602c3b7cea61 https://www.encodeproject.org/files/ENCFF000RHV/@@download/ENCFF000RHV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RJV/ released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000RHW fastq reads ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 696414432 Richard Myers, HAIB 209050cd9b62328b4a68b693a9df15cb https://www.encodeproject.org/files/ENCFF000RHW/@@download/ENCFF000RHW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RJV/ released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF920NFF bam unfiltered alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RHW, ENCFF643CGH 906808948 ENCODE Processing Pipeline f33cfff7bfea3f0209bf6ef77e82b681 https://www.encodeproject.org/files/ENCFF920NFF/@@download/ENCFF920NFF.bam GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF406KPS bam alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RHW, ENCFF643CGH 521550417 ENCODE Processing Pipeline 138b386531fbf8b699af48fd9d5e88e0 https://www.encodeproject.org/files/ENCFF406KPS/@@download/ENCFF406KPS.bam GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF072PMA bam unfiltered alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RHV, ENCFF643CGH 678862397 ENCODE Processing Pipeline e181dcb81ef369cc811b3ada8b385c51 https://www.encodeproject.org/files/ENCFF072PMA/@@download/ENCFF072PMA.bam GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF414YAT bam alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RHV, ENCFF643CGH 400147039 ENCODE Processing Pipeline ec722298268282a803fbe84bdf2edc47 https://www.encodeproject.org/files/ENCFF414YAT/@@download/ENCFF414YAT.bam GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF514PYC bam unfiltered alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RHW, ENCFF807MUK 902838599 ENCODE Processing Pipeline 74535ed7f5f7d88af7c19d7cbda8bf34 https://www.encodeproject.org/files/ENCFF514PYC/@@download/ENCFF514PYC.bam hg19 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF983NQT bam unfiltered alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RHV, ENCFF807MUK 674054731 ENCODE Processing Pipeline cf3c46d471fb2ee64c0aa85aa2c5a660 https://www.encodeproject.org/files/ENCFF983NQT/@@download/ENCFF983NQT.bam hg19 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF002HVX bam alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RHW, ENCFF807MUK 521818077 ENCODE Processing Pipeline 6177641e703611bd8195b2f5e8e830ab https://www.encodeproject.org/files/ENCFF002HVX/@@download/ENCFF002HVX.bam hg19 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF698QEQ bam alignments ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RHV, ENCFF807MUK 400358556 ENCODE Processing Pipeline 33dd9d51c697bfe6c01be02b0c899a33 https://www.encodeproject.org/files/ENCFF698QEQ/@@download/ENCFF698QEQ.bam hg19 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF520JQI bigWig signal p-value ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF406KPS, ENCFF503VFG 421089780 ENCODE Processing Pipeline 624eba91a2a7f056a8cba5b9343fff20 https://www.encodeproject.org/files/ENCFF520JQI/@@download/ENCFF520JQI.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF677MYP bigWig signal p-value ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF414YAT, ENCFF503VFG 504564981 ENCODE Processing Pipeline 03e50e5a7a987e18a4ff67a9aaa8c214 https://www.encodeproject.org/files/ENCFF677MYP/@@download/ENCFF677MYP.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF227SMZ bigWig fold change over control ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF406KPS, ENCFF503VFG 271044195 ENCODE Processing Pipeline c963f8112481ce68562864d830eddbca https://www.encodeproject.org/files/ENCFF227SMZ/@@download/ENCFF227SMZ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF793JZQ bigWig signal p-value ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF406KPS, ENCFF414YAT, ENCFF503VFG 605509510 ENCODE Processing Pipeline 07ed21407850cb11513b4b1675890b29 https://www.encodeproject.org/files/ENCFF793JZQ/@@download/ENCFF793JZQ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF691RKW bigWig fold change over control ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF414YAT, ENCFF503VFG 269926718 ENCODE Processing Pipeline 6cfae0434c76e2da4ea71b201438bd79 https://www.encodeproject.org/files/ENCFF691RKW/@@download/ENCFF691RKW.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF023DPZ bigWig fold change over control ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF406KPS, ENCFF414YAT, ENCFF503VFG 468617754 ENCODE Processing Pipeline 08ad5299f2eec0f41617401c1e541f7f https://www.encodeproject.org/files/ENCFF023DPZ/@@download/ENCFF023DPZ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF435ATR bed narrowPeak peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF414YAT, ENCFF503VFG 3668775 ENCODE Processing Pipeline 89d71c9daae18865de0c05f414959038 https://www.encodeproject.org/files/ENCFF435ATR/@@download/ENCFF435ATR.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF758EWB bed narrowPeak peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF406KPS, ENCFF503VFG 4121226 ENCODE Processing Pipeline 8a7ef0f92c2fa3c1c3ad0c13d5bbe00a https://www.encodeproject.org/files/ENCFF758EWB/@@download/ENCFF758EWB.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF634YAH bed narrowPeak peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF406KPS, ENCFF414YAT, ENCFF503VFG 4453094 ENCODE Processing Pipeline c94efb6cd5b150df606f31f09208e923 https://www.encodeproject.org/files/ENCFF634YAH/@@download/ENCFF634YAH.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF030WMT bigBed narrowPeak peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF758EWB 10405832 ENCODE Processing Pipeline 7a955a047d13b3c60170d4261f111acd https://www.encodeproject.org/files/ENCFF030WMT/@@download/ENCFF030WMT.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF508TUP bigBed narrowPeak peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF435ATR 8140294 ENCODE Processing Pipeline 0114ee09ffbbfb714fd757d562eb2c53 https://www.encodeproject.org/files/ENCFF508TUP/@@download/ENCFF508TUP.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF433NIE bed narrowPeak optimal idr thresholded peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF435ATR, ENCFF634YAH, ENCFF758EWB 72498 ENCODE Processing Pipeline fdb3e4cdbf57d192f28e621aadf462fb https://www.encodeproject.org/files/ENCFF433NIE/@@download/ENCFF433NIE.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF723ESM bed narrowPeak conservative idr thresholded peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF435ATR, ENCFF634YAH, ENCFF758EWB 28005 ENCODE Processing Pipeline 3d668a2b94957c7bd8385becfe9a9033 https://www.encodeproject.org/files/ENCFF723ESM/@@download/ENCFF723ESM.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF746ICH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF723ESM 95390 ENCODE Processing Pipeline 16a2ec7155a0f6bbcfeaaf1d6d8b908e https://www.encodeproject.org/files/ENCFF746ICH/@@download/ENCFF746ICH.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF656FJO bigBed narrowPeak peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF634YAH 10989086 ENCODE Processing Pipeline 561b18ba42ee39c7cec70b6f127bc1ce https://www.encodeproject.org/files/ENCFF656FJO/@@download/ENCFF656FJO.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF725NRZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLL ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF433NIE 181129 ENCODE Processing Pipeline 2da4c81f922c427721b2164af539e81b https://www.encodeproject.org/files/ENCFF725NRZ/@@download/ENCFF725NRZ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000QAH bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QAQ 466328611 Richard Myers, HAIB 020e910936b56863f515acbda2f87fda https://www.encodeproject.org/files/ENCFF000QAH/@@download/ENCFF000QAH.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QAI bigBed broadPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJZ 423722 Richard Myers, HAIB bf49644be3d57182dd1ae7661925829b https://www.encodeproject.org/files/ENCFF000QAI/@@download/ENCFF000QAI.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QAJ bigBed broadPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKA 434312 Richard Myers, HAIB 68278717a52e845e0dc221166d569d5b https://www.encodeproject.org/files/ENCFF000QAJ/@@download/ENCFF000QAJ.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QAK bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QAV 717277101 Richard Myers, HAIB ed059f9d80a3e2b893bfd5bcddde74f5 https://www.encodeproject.org/files/ENCFF000QAK/@@download/ENCFF000QAK.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QAM bigWig raw signal ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 13046844 Richard Myers, HAIB d2aa330a4f0d2601c8ca4004fe88fb1b https://www.encodeproject.org/files/ENCFF000QAM/@@download/ENCFF000QAM.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QAO bigWig raw signal ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 28268488 Richard Myers, HAIB d6e4a38d48b13f2e91d8dd0ce0723000 https://www.encodeproject.org/files/ENCFF000QAO/@@download/ENCFF000QAO.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QAQ fastq reads ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 467330636 Richard Myers, HAIB 5ae5c846ee52c3cc15fbab7444ebe6ff https://www.encodeproject.org/files/ENCFF000QAQ/@@download/ENCFF000QAQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000QAV fastq reads ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 786381143 Richard Myers, HAIB 46ab0ad46878a180cfd0c571e4afd7a0 https://www.encodeproject.org/files/ENCFF000QAV/@@download/ENCFF000QAV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF001UJZ bed broadPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 204699 Richard Myers, HAIB 0cb8237b6fb91cc17841d9c5bedd989f https://www.encodeproject.org/files/ENCFF001UJZ/@@download/ENCFF001UJZ.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF001UKA bed broadPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 245856 Richard Myers, HAIB afa750ef05c8e8ec1aa7e1a43c5af754 https://www.encodeproject.org/files/ENCFF001UKA/@@download/ENCFF001UKA.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF002CLZ bed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 290707 ENCODE Consortium Analysis Working Group e81f2714fb61f80af419bc5e45682868 https://www.encodeproject.org/files/ENCFF002CLZ/@@download/ENCFF002CLZ.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF612ERP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE ENCFF002CLZ 582996 ENCODE Consortium 5afaa5b21f1a9a388198443399f9f1ed https://www.encodeproject.org/files/ENCFF612ERP/@@download/ENCFF612ERP.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF351CRO bam unfiltered alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAQ, ENCFF643CGH 597085098 ENCODE Processing Pipeline c1122d659fcf4f013a953b93a8348c17 https://www.encodeproject.org/files/ENCFF351CRO/@@download/ENCFF351CRO.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF902IUF bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAQ, ENCFF643CGH 303854787 ENCODE Processing Pipeline 0b7d97e48aed00e6f4753a3cfdf40906 https://www.encodeproject.org/files/ENCFF902IUF/@@download/ENCFF902IUF.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF603XOJ bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAV, ENCFF643CGH 233791591 ENCODE Processing Pipeline c2640c58a8cf7ace101536ea8da8f1c7 https://www.encodeproject.org/files/ENCFF603XOJ/@@download/ENCFF603XOJ.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF073NRB bam unfiltered alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAV, ENCFF643CGH 882019825 ENCODE Processing Pipeline 8abf72005e30dd3c67bcfe55984b76c9 https://www.encodeproject.org/files/ENCFF073NRB/@@download/ENCFF073NRB.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF100PUI bam unfiltered alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAQ, ENCFF807MUK 596186911 ENCODE Processing Pipeline 118e048f9405cd4e076c2ce30bd6f254 https://www.encodeproject.org/files/ENCFF100PUI/@@download/ENCFF100PUI.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF538JCZ bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAQ, ENCFF807MUK 304054813 ENCODE Processing Pipeline 7525eba97ed590f1de5640cb687d7a12 https://www.encodeproject.org/files/ENCFF538JCZ/@@download/ENCFF538JCZ.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF633ZKV bam unfiltered alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAV, ENCFF807MUK 881245326 ENCODE Processing Pipeline cb44604dd05588cf62993d837c1bf08e https://www.encodeproject.org/files/ENCFF633ZKV/@@download/ENCFF633ZKV.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF175EOK bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAV, ENCFF807MUK 233968251 ENCODE Processing Pipeline aeb8475817d5c22fd20e0b14e59a6cdd https://www.encodeproject.org/files/ENCFF175EOK/@@download/ENCFF175EOK.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF174ZDJ bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF902IUF 171945906 ENCODE Processing Pipeline c753d22f627449f8e5228333c5cda158 https://www.encodeproject.org/files/ENCFF174ZDJ/@@download/ENCFF174ZDJ.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF999FGE bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF902IUF 130670411 ENCODE Processing Pipeline 119e7d0c95d88f999500b1975e5c192e https://www.encodeproject.org/files/ENCFF999FGE/@@download/ENCFF999FGE.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF908PGZ bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF603XOJ, ENCFF772PJM, ENCFF902IUF 213398081 ENCODE Processing Pipeline 1a0aa0d36d7dd0fd3ed4572e8c604505 https://www.encodeproject.org/files/ENCFF908PGZ/@@download/ENCFF908PGZ.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF455RYT bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF603XOJ, ENCFF772PJM 180241985 ENCODE Processing Pipeline 5e86af15e17c2639736ee4a99362adf7 https://www.encodeproject.org/files/ENCFF455RYT/@@download/ENCFF455RYT.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF883TBT bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF603XOJ, ENCFF772PJM 99777156 ENCODE Processing Pipeline 55c657562805a2fd5d72267a86331c4a https://www.encodeproject.org/files/ENCFF883TBT/@@download/ENCFF883TBT.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF781AWX bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF603XOJ, ENCFF772PJM, ENCFF902IUF 4583450 ENCODE Processing Pipeline 2b4e0cbe56a01e79132a5d60ffa468fd https://www.encodeproject.org/files/ENCFF781AWX/@@download/ENCFF781AWX.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF940QSW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF554UPA 426468 ENCODE Processing Pipeline 2f7cee61c36c0bb0492e94c1f13c6c4b https://www.encodeproject.org/files/ENCFF940QSW/@@download/ENCFF940QSW.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF124HAC bed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF210BNW, ENCFF419RSJ, ENCFF507LZF, ENCFF781AWX 261370 ENCODE Processing Pipeline 02eada5e9e0de75b0ff67b7d443fead1 https://www.encodeproject.org/files/ENCFF124HAC/@@download/ENCFF124HAC.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF025QZU bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF603XOJ, ENCFF772PJM, ENCFF902IUF 209106168 ENCODE Processing Pipeline 091d27dfc4e0aa87fce4eef627553317 https://www.encodeproject.org/files/ENCFF025QZU/@@download/ENCFF025QZU.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF507LZF bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF902IUF 2539837 ENCODE Processing Pipeline 6321a82df6d44d9c955c6489ac010538 https://www.encodeproject.org/files/ENCFF507LZF/@@download/ENCFF507LZF.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF210BNW bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF603XOJ, ENCFF772PJM 3427898 ENCODE Processing Pipeline e6208db8813379fbb61864602f00cb73 https://www.encodeproject.org/files/ENCFF210BNW/@@download/ENCFF210BNW.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF087NMZ bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF507LZF 5130893 ENCODE Processing Pipeline 2b921bb91e37001557340ca1140d7049 https://www.encodeproject.org/files/ENCFF087NMZ/@@download/ENCFF087NMZ.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF634BLI bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF210BNW 7655795 ENCODE Processing Pipeline 517652c08a2ec060475fefe3b088d3fc https://www.encodeproject.org/files/ENCFF634BLI/@@download/ENCFF634BLI.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF611XXI bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF781AWX 10170809 ENCODE Processing Pipeline bce7f00f9ce0622dab35ff5e5935af47 https://www.encodeproject.org/files/ENCFF611XXI/@@download/ENCFF611XXI.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF554UPA bed narrowPeak conservative idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF210BNW, ENCFF419RSJ, ENCFF507LZF, ENCFF781AWX 192917 ENCODE Processing Pipeline 7680f41509e7f77365503fb5992ddfc0 https://www.encodeproject.org/files/ENCFF554UPA/@@download/ENCFF554UPA.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF155CBK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF124HAC 527540 ENCODE Processing Pipeline d5ff1e57829ea1e5da07e258c1b3f56f https://www.encodeproject.org/files/ENCFF155CBK/@@download/ENCFF155CBK.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample poor library complexity, control low read depth, severe bottlenecking, insufficient read depth ENCFF000PED bam alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PEQ 1367210412 Richard Myers, HAIB 30f7fe368df380a6fb04c1b5d0f702c4 https://www.encodeproject.org/files/ENCFF000PED/@@download/ENCFF000PED.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PEE bam alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PEM 724935183 Richard Myers, HAIB 7ee73f4267e65e34fd9fe98ebaaebee4 https://www.encodeproject.org/files/ENCFF000PEE/@@download/ENCFF000PEE.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PEF bigBed broadPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UEY 304242 Richard Myers, HAIB 9d0ff3e57896f98345659ca3195770c5 https://www.encodeproject.org/files/ENCFF000PEF/@@download/ENCFF000PEF.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PEG bigBed broadPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UEZ 342065 Richard Myers, HAIB 74f868d135e3ef5eaaa11f77ea3eb656 https://www.encodeproject.org/files/ENCFF000PEG/@@download/ENCFF000PEG.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PEI bigWig raw signal ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 10146085 Richard Myers, HAIB c8682256478f9786bce0922004f2d7bb https://www.encodeproject.org/files/ENCFF000PEI/@@download/ENCFF000PEI.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PEJ bigWig raw signal ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 10746156 Richard Myers, HAIB 42cfbd9517bea0288fcd42ad99eb2173 https://www.encodeproject.org/files/ENCFF000PEJ/@@download/ENCFF000PEJ.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PEM fastq reads ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 697822000 Richard Myers, HAIB b94471233d3c7af5ff9a8b67a188a718 https://www.encodeproject.org/files/ENCFF000PEM/@@download/ENCFF000PEM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PFD/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PEQ fastq reads ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1250853408 Richard Myers, HAIB c0b47c0a80929440a070a6eb4563c281 https://www.encodeproject.org/files/ENCFF000PEQ/@@download/ENCFF000PEQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PFD/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF001UEY bed broadPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 156365 Richard Myers, HAIB 86423063f47291e026bb7f82c45da6db https://www.encodeproject.org/files/ENCFF001UEY/@@download/ENCFF001UEY.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UEZ bed broadPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 194910 Richard Myers, HAIB 8663a8240ca9951563dca20a68794cae https://www.encodeproject.org/files/ENCFF001UEZ/@@download/ENCFF001UEZ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CJY bed narrowPeak optimal idr thresholded peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 207254 ENCODE Consortium Analysis Working Group 14614b562eba5f555233926b8a0d4db7 https://www.encodeproject.org/files/ENCFF002CJY/@@download/ENCFF002CJY.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF361PFF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE ENCFF002CJY 398062 ENCODE Consortium 2edb248c1bae31814920444aa4fe4f5e https://www.encodeproject.org/files/ENCFF361PFF/@@download/ENCFF361PFF.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF754IAO bam alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PEM, ENCFF643CGH 521927877 ENCODE Processing Pipeline 56811148b6a3928fc3a97f7b12132cc2 https://www.encodeproject.org/files/ENCFF754IAO/@@download/ENCFF754IAO.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF776JIL bam unfiltered alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PEM, ENCFF643CGH 899608462 ENCODE Processing Pipeline 4649c24bfaae2eef0311ddca7d643216 https://www.encodeproject.org/files/ENCFF776JIL/@@download/ENCFF776JIL.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF513DVS bam unfiltered alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEQ, ENCFF643CGH 1454991395 ENCODE Processing Pipeline d4ca722fca8c023f659741d123b51ac0 https://www.encodeproject.org/files/ENCFF513DVS/@@download/ENCFF513DVS.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF355WAL bam alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEQ, ENCFF643CGH 460086995 ENCODE Processing Pipeline cf5aade4337ccd52d4fb38fc3311a281 https://www.encodeproject.org/files/ENCFF355WAL/@@download/ENCFF355WAL.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF490CSD bam unfiltered alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PEM, ENCFF807MUK 896438649 ENCODE Processing Pipeline 70cbd5337d3c51839215f49bf57bf1f3 https://www.encodeproject.org/files/ENCFF490CSD/@@download/ENCFF490CSD.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF742LFF bam alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PEM, ENCFF807MUK 521460178 ENCODE Processing Pipeline 1c172268dbb400b25a706fe1e09141dc https://www.encodeproject.org/files/ENCFF742LFF/@@download/ENCFF742LFF.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF771VTL bam unfiltered alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEQ, ENCFF807MUK 1451538292 ENCODE Processing Pipeline c2f3031aca02c4272c3a312fdd383aa3 https://www.encodeproject.org/files/ENCFF771VTL/@@download/ENCFF771VTL.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF647PGL bam alignments ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEQ, ENCFF807MUK 460341992 ENCODE Processing Pipeline aa54304f99bdfb2e662585a16cfa9c9e https://www.encodeproject.org/files/ENCFF647PGL/@@download/ENCFF647PGL.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF302PZA bigWig signal p-value ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF355WAL 398728494 ENCODE Processing Pipeline bce743b49e5f8c5f200f2b7952293463 https://www.encodeproject.org/files/ENCFF302PZA/@@download/ENCFF302PZA.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF810PGS bigWig signal p-value ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF202PGY, ENCFF754IAO 341565141 ENCODE Processing Pipeline b4b2866c9b75d451034ec90ad913f715 https://www.encodeproject.org/files/ENCFF810PGS/@@download/ENCFF810PGS.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF352JFB bigWig signal p-value ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF202PGY, ENCFF355WAL, ENCFF754IAO 428017361 ENCODE Processing Pipeline 04f2c63e63d0d57ba4639c2feae807fc https://www.encodeproject.org/files/ENCFF352JFB/@@download/ENCFF352JFB.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF023MRQ bigWig fold change over control ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF355WAL 199360449 ENCODE Processing Pipeline 8377f392f4f734375030d7a102956051 https://www.encodeproject.org/files/ENCFF023MRQ/@@download/ENCFF023MRQ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF435NBI bigWig fold change over control ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF202PGY, ENCFF754IAO 274126814 ENCODE Processing Pipeline a619c29a36211cd0414ab2df98075005 https://www.encodeproject.org/files/ENCFF435NBI/@@download/ENCFF435NBI.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF089QUB bigWig fold change over control ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF202PGY, ENCFF355WAL, ENCFF754IAO 425014541 ENCODE Processing Pipeline 5851d75f5d6f23b37318a925399e8bc2 https://www.encodeproject.org/files/ENCFF089QUB/@@download/ENCFF089QUB.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF262UVQ bigBed narrowPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF553EXE 7173892 ENCODE Processing Pipeline 6d48cf73fcba18313c88c83780b262f6 https://www.encodeproject.org/files/ENCFF262UVQ/@@download/ENCFF262UVQ.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF228MRQ bed narrowPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF202PGY, ENCFF754IAO 4255853 ENCODE Processing Pipeline 082e5fc4ba9ea2d1c718ceafa3d3fbcc https://www.encodeproject.org/files/ENCFF228MRQ/@@download/ENCFF228MRQ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF835GKN bigBed narrowPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF228MRQ 10543443 ENCODE Processing Pipeline f106f95a685b80187017a8180b0a3b35 https://www.encodeproject.org/files/ENCFF835GKN/@@download/ENCFF835GKN.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF553EXE bed narrowPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF355WAL 3352201 ENCODE Processing Pipeline 75174471e8b15d252811f5083aa79bb1 https://www.encodeproject.org/files/ENCFF553EXE/@@download/ENCFF553EXE.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF086TZQ bed narrowPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF202PGY, ENCFF355WAL, ENCFF754IAO 4692643 ENCODE Processing Pipeline 8f7227c5efb835e7ef5eafe4810e2719 https://www.encodeproject.org/files/ENCFF086TZQ/@@download/ENCFF086TZQ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF619KDE bed narrowPeak conservative idr thresholded peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF086TZQ, ENCFF228MRQ, ENCFF419RSJ, ENCFF553EXE 126918 ENCODE Processing Pipeline 0e6f9e89560b13fe651ae71cf0eebe18 https://www.encodeproject.org/files/ENCFF619KDE/@@download/ENCFF619KDE.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF208NUB bed narrowPeak optimal idr thresholded peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF086TZQ, ENCFF228MRQ, ENCFF419RSJ, ENCFF553EXE 198282 ENCODE Processing Pipeline 3a0823a118dde65ca89700b16c8ff92a https://www.encodeproject.org/files/ENCFF208NUB/@@download/ENCFF208NUB.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF922NZF bigBed narrowPeak peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF086TZQ 11045142 ENCODE Processing Pipeline 5ff8f28bb8d5cb0ecda896464b521259 https://www.encodeproject.org/files/ENCFF922NZF/@@download/ENCFF922NZF.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF789FRX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF208NUB 383984 ENCODE Processing Pipeline d998134e467af269dbcc641262503d36 https://www.encodeproject.org/files/ENCFF789FRX/@@download/ENCFF789FRX.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF386TYK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMN ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF619KDE 286970 ENCODE Processing Pipeline 07dcd6e2e20bbd01b22396ac5fcc04d6 https://www.encodeproject.org/files/ENCFF386TYK/@@download/ENCFF386TYK.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000NJN bam alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NKG 1756087630 Richard Myers, HAIB 60c98e132c7ca02402917622b6721fe3 https://www.encodeproject.org/files/ENCFF000NJN/@@download/ENCFF000NJN.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NJO bam alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NKB 1725538252 Richard Myers, HAIB f50db72090bfff5fd585de86fbafec14 https://www.encodeproject.org/files/ENCFF000NJO/@@download/ENCFF000NJO.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NJP bigBed broadPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TUF 295001 Richard Myers, HAIB 4439a403eba486a13210855e438f5db7 https://www.encodeproject.org/files/ENCFF000NJP/@@download/ENCFF000NJP.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NJQ bigBed broadPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TUG 227285 Richard Myers, HAIB 09cb6171ea439cba8e0a4f16ebd49af2 https://www.encodeproject.org/files/ENCFF000NJQ/@@download/ENCFF000NJQ.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NJR bigWig raw signal ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 1 8521124 Richard Myers, HAIB 3fe8a2c70865bc61c1bb16a891eebcda https://www.encodeproject.org/files/ENCFF000NJR/@@download/ENCFF000NJR.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NJT bigWig raw signal ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 1 9316410 Richard Myers, HAIB 67f16863776d4a1c51531181268793a0 https://www.encodeproject.org/files/ENCFF000NJT/@@download/ENCFF000NJT.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NKB fastq reads ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1652316950 Richard Myers, HAIB 5508e17a73e7765fce6261cfcc20b5dd https://www.encodeproject.org/files/ENCFF000NKB/@@download/ENCFF000NKB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF000NKG fastq reads ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1726523121 Richard Myers, HAIB bcbed91534768ecff21971c6719d05ec https://www.encodeproject.org/files/ENCFF000NKG/@@download/ENCFF000NKG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF001TUF bed broadPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 1 127739 Richard Myers, HAIB 0a4ea8ae6db74d987f9563e431ed7455 https://www.encodeproject.org/files/ENCFF001TUF/@@download/ENCFF001TUF.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF001TUG bed broadPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 1 89431 Richard Myers, HAIB ba8d968000674e0dff1adfbbd559c116 https://www.encodeproject.org/files/ENCFF001TUG/@@download/ENCFF001TUG.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF002CGG bed narrowPeak optimal idr thresholded peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 182974 ENCODE Consortium Analysis Working Group 35e7864c26166b091a0d73cec1ae8595 https://www.encodeproject.org/files/ENCFF002CGG/@@download/ENCFF002CGG.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF129KBY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE ENCFF002CGG 552956 ENCODE Consortium ccdbe8c27553e4810b5f75a1f0c80c70 https://www.encodeproject.org/files/ENCFF129KBY/@@download/ENCFF129KBY.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF617FVJ bam unfiltered alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NKG, ENCFF643CGH 1927060570 ENCODE Processing Pipeline cbebff040f2416ae275cce902ae4ebeb https://www.encodeproject.org/files/ENCFF617FVJ/@@download/ENCFF617FVJ.bam GRCh38 released low read length biological replicates with identical biosample ENCFF090UNH bam unfiltered alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NKB, ENCFF643CGH 1879835959 ENCODE Processing Pipeline 2315494b0a9eaff2ae28b454aba7840d https://www.encodeproject.org/files/ENCFF090UNH/@@download/ENCFF090UNH.bam GRCh38 released low read length biological replicates with identical biosample ENCFF774ZQG bam alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NKB, ENCFF643CGH 1095549613 ENCODE Processing Pipeline 86d2ca6a2a586ab99cb3726a9fcabfa7 https://www.encodeproject.org/files/ENCFF774ZQG/@@download/ENCFF774ZQG.bam GRCh38 released low read length biological replicates with identical biosample ENCFF637ZXE bam alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NKG, ENCFF643CGH 1168817433 ENCODE Processing Pipeline 783d70c576a8f1e349abe69371f6c75b https://www.encodeproject.org/files/ENCFF637ZXE/@@download/ENCFF637ZXE.bam GRCh38 released low read length biological replicates with identical biosample ENCFF217FGA bam unfiltered alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NKG, ENCFF807MUK 1917623254 ENCODE Processing Pipeline f5f202a249f9adc2a93147fa3fa150c5 https://www.encodeproject.org/files/ENCFF217FGA/@@download/ENCFF217FGA.bam hg19 released low read length biological replicates with identical biosample ENCFF226UHN bam alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NKG, ENCFF807MUK 1169023823 ENCODE Processing Pipeline 75063bf2175de890b9953b28c408b2cb https://www.encodeproject.org/files/ENCFF226UHN/@@download/ENCFF226UHN.bam hg19 released low read length biological replicates with identical biosample ENCFF687PCL bam unfiltered alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NKB, ENCFF807MUK 1872801904 ENCODE Processing Pipeline 71fcce0211d7fb67f4f4f786d1da589a https://www.encodeproject.org/files/ENCFF687PCL/@@download/ENCFF687PCL.bam hg19 released low read length biological replicates with identical biosample ENCFF613UOL bam alignments ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NKB, ENCFF807MUK 1095754081 ENCODE Processing Pipeline f4cc302dfb6a37af54800f984c6a83da https://www.encodeproject.org/files/ENCFF613UOL/@@download/ENCFF613UOL.bam hg19 released low read length biological replicates with identical biosample ENCFF688IJB bigWig signal p-value ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 ENCFF637ZXE, ENCFF656HEF 700733540 ENCODE Processing Pipeline 3e9039b83739a20dad2ac6314b763671 https://www.encodeproject.org/files/ENCFF688IJB/@@download/ENCFF688IJB.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF468OYP bigWig signal p-value ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF774ZQG 619180823 ENCODE Processing Pipeline 83ef2213d23dd33c405c8040e4f11582 https://www.encodeproject.org/files/ENCFF468OYP/@@download/ENCFF468OYP.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF010LTG bigWig signal p-value ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF637ZXE, ENCFF656HEF, ENCFF774ZQG 824650295 ENCODE Processing Pipeline 2dcb525068d416603f40b9318bc755f2 https://www.encodeproject.org/files/ENCFF010LTG/@@download/ENCFF010LTG.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF372OSA bigWig fold change over control ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 ENCFF637ZXE, ENCFF656HEF 557000296 ENCODE Processing Pipeline 6c1fbcd9a2a44fb4bc1d5d4a2d6a2d82 https://www.encodeproject.org/files/ENCFF372OSA/@@download/ENCFF372OSA.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF157GKA bigWig fold change over control ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF774ZQG 580449229 ENCODE Processing Pipeline c100ed82bb48fc70e3b2b607392f6d2f https://www.encodeproject.org/files/ENCFF157GKA/@@download/ENCFF157GKA.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF295LJY bigWig fold change over control ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF637ZXE, ENCFF656HEF, ENCFF774ZQG 919630515 ENCODE Processing Pipeline 27b0597dbfc8bb671920e969ca09f07b https://www.encodeproject.org/files/ENCFF295LJY/@@download/ENCFF295LJY.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF576OOX bed narrowPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 ENCFF637ZXE, ENCFF656HEF 5621393 ENCODE Processing Pipeline 2ced19f44576f730784669137afdc792 https://www.encodeproject.org/files/ENCFF576OOX/@@download/ENCFF576OOX.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF865UNN bed narrowPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF637ZXE, ENCFF656HEF, ENCFF774ZQG 6793331 ENCODE Processing Pipeline b31e7139f1035e8b1d5493a0e501e267 https://www.encodeproject.org/files/ENCFF865UNN/@@download/ENCFF865UNN.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF117CBR bed narrowPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF774ZQG 6184704 ENCODE Processing Pipeline 4f3232d0f8d93e2ec6de9e5e20c1a304 https://www.encodeproject.org/files/ENCFF117CBR/@@download/ENCFF117CBR.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF660DEL bigBed narrowPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 2 ENCFF117CBR 13191553 ENCODE Processing Pipeline a0eb94239da48d4e44ef562ce090cb0d https://www.encodeproject.org/files/ENCFF660DEL/@@download/ENCFF660DEL.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF853OHB bigBed narrowPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF865UNN 13392783 ENCODE Processing Pipeline fe13a73074c8fd6b18ffbfec0cf61104 https://www.encodeproject.org/files/ENCFF853OHB/@@download/ENCFF853OHB.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF192LJQ bed narrowPeak conservative idr thresholded peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF117CBR, ENCFF419RSJ, ENCFF576OOX, ENCFF865UNN 170502 ENCODE Processing Pipeline 3beaeeba9aa397fb2e97e78d4186652b https://www.encodeproject.org/files/ENCFF192LJQ/@@download/ENCFF192LJQ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF809OVX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF593ZJA 475994 ENCODE Processing Pipeline d2b80b57ad20ea7b7d23ba1f27cc2167 https://www.encodeproject.org/files/ENCFF809OVX/@@download/ENCFF809OVX.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF559PPT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF192LJQ 417670 ENCODE Processing Pipeline 3615a8f4a64ade82664a291ac1bf6684 https://www.encodeproject.org/files/ENCFF559PPT/@@download/ENCFF559PPT.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF529IGW bigBed narrowPeak peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1 ENCFF576OOX 13391267 ENCODE Processing Pipeline 9118bfd66009fa684a973ecb2233b6b1 https://www.encodeproject.org/files/ENCFF529IGW/@@download/ENCFF529IGW.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF593ZJA bed narrowPeak optimal idr thresholded peaks ENCSR000BPZ ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ZBTB33-human ENCAB000AML DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF117CBR, ENCFF419RSJ, ENCFF576OOX, ENCFF865UNN 203825 ENCODE Processing Pipeline 10f21f77a3432a96779ca2f0bf1b4123 https://www.encodeproject.org/files/ENCFF593ZJA/@@download/ENCFF593ZJA.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF454EYI fastq reads ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 1 50 single-ended 1376902784 Richard Myers, HAIB d1ff1485eb48deb9f783ca24bf473aea SRA:SRR5331226 https://www.encodeproject.org/files/ENCFF454EYI/@@download/ENCFF454EYI.fastq.gz HiSeq 2000 /files/ENCFF536LRX/ released borderline replicate concordance, low read depth ENCFF232WOY fastq reads ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 1 50 single-ended 1637161467 Richard Myers, HAIB 407f64cfd22a776e0c230f373c2e27fe SRA:SRR5331227 https://www.encodeproject.org/files/ENCFF232WOY/@@download/ENCFF232WOY.fastq.gz HiSeq 2000 /files/ENCFF913JVQ/ released borderline replicate concordance, low read depth ENCFF107VJA bam alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 50 ENCFF232WOY, ENCFF807MUK 1310208680 ENCODE Processing Pipeline 25779f740041eb74083d794af4963c63 https://www.encodeproject.org/files/ENCFF107VJA/@@download/ENCFF107VJA.bam hg19 released borderline replicate concordance, low read depth ENCFF708IYO bam alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 50 ENCFF454EYI, ENCFF807MUK 1165039842 ENCODE Processing Pipeline 1933f2cc439827f690a6bc477d4b6cbf https://www.encodeproject.org/files/ENCFF708IYO/@@download/ENCFF708IYO.bam hg19 released borderline replicate concordance, low read depth ENCFF877DYM bam unfiltered alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 50 ENCFF454EYI, ENCFF643CGH 1503195194 ENCODE Processing Pipeline 6495391c3d1c9c47a3f8477728f8ca19 https://www.encodeproject.org/files/ENCFF877DYM/@@download/ENCFF877DYM.bam GRCh38 released borderline replicate concordance, low read depth ENCFF468FPM bam unfiltered alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 50 ENCFF232WOY, ENCFF643CGH 1758259023 ENCODE Processing Pipeline 5c72be1533bf4f12afb0197841c10fb6 https://www.encodeproject.org/files/ENCFF468FPM/@@download/ENCFF468FPM.bam GRCh38 released borderline replicate concordance, low read depth ENCFF719XQY bam alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 50 ENCFF454EYI, ENCFF643CGH 1164666225 ENCODE Processing Pipeline 0ee35c3100317ca2d4f4748598942809 https://www.encodeproject.org/files/ENCFF719XQY/@@download/ENCFF719XQY.bam GRCh38 released borderline replicate concordance, low read depth ENCFF544DDY bam alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 50 ENCFF232WOY, ENCFF643CGH 1309680764 ENCODE Processing Pipeline 006db9dee42877afdf16dce0c20a5efc https://www.encodeproject.org/files/ENCFF544DDY/@@download/ENCFF544DDY.bam GRCh38 released borderline replicate concordance, low read depth ENCFF660KID bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF162ZOO, ENCFF544DDY 713062287 ENCODE Processing Pipeline 646c92d7ced7c03f98fa8450add1e5a6 https://www.encodeproject.org/files/ENCFF660KID/@@download/ENCFF660KID.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF630SVO bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF719XQY, ENCFF968UFH 671202614 ENCODE Processing Pipeline 13ec3fc56f0b0e2c836cb8560204f0ef https://www.encodeproject.org/files/ENCFF630SVO/@@download/ENCFF630SVO.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF838LIQ bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF162ZOO, ENCFF544DDY, ENCFF719XQY, ENCFF968UFH 1277192286 ENCODE Processing Pipeline 47118af05c49be50cffb73b92a19b895 https://www.encodeproject.org/files/ENCFF838LIQ/@@download/ENCFF838LIQ.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF418YSU bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF162ZOO, ENCFF544DDY 596529877 ENCODE Processing Pipeline 9976ff88988dccd597a70424655ab239 https://www.encodeproject.org/files/ENCFF418YSU/@@download/ENCFF418YSU.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF219VGB bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF719XQY, ENCFF968UFH 550379277 ENCODE Processing Pipeline fa82f6e5070b42f2e649e7286cb8b658 https://www.encodeproject.org/files/ENCFF219VGB/@@download/ENCFF219VGB.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF657DIW bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF162ZOO, ENCFF544DDY, ENCFF719XQY, ENCFF968UFH 1209509430 ENCODE Processing Pipeline 1b4728345f0b03c1f513ac47d409cb98 https://www.encodeproject.org/files/ENCFF657DIW/@@download/ENCFF657DIW.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF718ZLW bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF719XQY, ENCFF968UFH 5768360 ENCODE Processing Pipeline f1f68f95d037e8c649e5ad40f57950a8 https://www.encodeproject.org/files/ENCFF718ZLW/@@download/ENCFF718ZLW.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF243IIV bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF718ZLW 13166722 ENCODE Processing Pipeline 0189c8528767f2fc61a2f1fc1591a651 https://www.encodeproject.org/files/ENCFF243IIV/@@download/ENCFF243IIV.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF070FHF bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF515RUZ 13076381 ENCODE Processing Pipeline 52e6abc6aa0fb9d6affb7ba5d1842c3b https://www.encodeproject.org/files/ENCFF070FHF/@@download/ENCFF070FHF.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF105RJJ bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF162ZOO, ENCFF544DDY, ENCFF719XQY, ENCFF968UFH 7003878 ENCODE Processing Pipeline dce07d13585a7349b2ed2cb6584240cc https://www.encodeproject.org/files/ENCFF105RJJ/@@download/ENCFF105RJJ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF515RUZ bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF162ZOO, ENCFF544DDY 6431040 ENCODE Processing Pipeline 0c755a6f2bb9135aa0a3421567c13e9c https://www.encodeproject.org/files/ENCFF515RUZ/@@download/ENCFF515RUZ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF290BTM bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF105RJJ 13238850 ENCODE Processing Pipeline fd59222eea71e6ce1a4bb98c515e013f https://www.encodeproject.org/files/ENCFF290BTM/@@download/ENCFF290BTM.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF402SQA bigBed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF666MKU 349005 ENCODE Processing Pipeline 02ede845629758f3e3c42ed8955903de https://www.encodeproject.org/files/ENCFF402SQA/@@download/ENCFF402SQA.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF666MKU bed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF105RJJ, ENCFF419RSJ, ENCFF515RUZ, ENCFF718ZLW 165150 ENCODE Processing Pipeline dfec03e4332932d52d1345a1eec18895 https://www.encodeproject.org/files/ENCFF666MKU/@@download/ENCFF666MKU.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF309AID bigBed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF741CLJ 655348 ENCODE Processing Pipeline cda00ad0694c70f66bdd406bafa3a0d2 https://www.encodeproject.org/files/ENCFF309AID/@@download/ENCFF309AID.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF741CLJ bed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF105RJJ, ENCFF419RSJ, ENCFF515RUZ, ENCFF718ZLW 303753 ENCODE Processing Pipeline fd614180ded8d33a00c702f5fc83e723 https://www.encodeproject.org/files/ENCFF741CLJ/@@download/ENCFF741CLJ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF789KSW bam unfiltered alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 50 ENCFF232WOY, ENCFF807MUK 1752580791 ENCODE Processing Pipeline 5a00ddc82303eaa60cd1e64f123e8547 https://www.encodeproject.org/files/ENCFF789KSW/@@download/ENCFF789KSW.bam hg19 released borderline replicate concordance, low read depth ENCFF452MYV bam unfiltered alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 50 ENCFF454EYI, ENCFF807MUK 1500118592 ENCODE Processing Pipeline 6fe022223da7e40e465ba6485026db63 https://www.encodeproject.org/files/ENCFF452MYV/@@download/ENCFF452MYV.bam hg19 released borderline replicate concordance, low read depth ENCFF821GMK bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF107VJA, ENCFF444TNY 764802479 ENCODE Processing Pipeline fe98432f49be40f5964de182914aa08a https://www.encodeproject.org/files/ENCFF821GMK/@@download/ENCFF821GMK.bigWig hg19 released borderline replicate concordance, low read depth mismatched status ENCFF844TQX bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF107VJA, ENCFF444TNY 6439920 ENCODE Processing Pipeline 282e4782f8494d85976bcf5d26aef0a7 https://www.encodeproject.org/files/ENCFF844TQX/@@download/ENCFF844TQX.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF258FWL bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF107VJA, ENCFF444TNY 594205650 ENCODE Processing Pipeline 2e640b56540a58fb594973cc7560589b https://www.encodeproject.org/files/ENCFF258FWL/@@download/ENCFF258FWL.bigWig hg19 released borderline replicate concordance, low read depth mismatched status ENCFF570BQM bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF082GBO, ENCFF107VJA, ENCFF444TNY, ENCFF708IYO 1400223074 ENCODE Processing Pipeline 1b9fc624c8753508c4fc350c49a6342b https://www.encodeproject.org/files/ENCFF570BQM/@@download/ENCFF570BQM.bigWig hg19 released borderline replicate concordance, low read depth ENCFF820ZTK bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF082GBO, ENCFF708IYO 5560359 ENCODE Processing Pipeline f8f01706849c4eee56860e0693bd4143 https://www.encodeproject.org/files/ENCFF820ZTK/@@download/ENCFF820ZTK.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF576LFG bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF082GBO, ENCFF107VJA, ENCFF444TNY, ENCFF708IYO 6999284 ENCODE Processing Pipeline 24ec94b58a385ffd60d08cb75a51c5b3 https://www.encodeproject.org/files/ENCFF576LFG/@@download/ENCFF576LFG.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF093TWU bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF844TQX 13056797 ENCODE Processing Pipeline e1476f78228f5335e4359f21f6e76b99 https://www.encodeproject.org/files/ENCFF093TWU/@@download/ENCFF093TWU.bigBed hg19 released borderline replicate concordance, low read depth ENCFF234PWC bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF082GBO, ENCFF708IYO 552460120 ENCODE Processing Pipeline cde38b2ca6b9d2db90117479592cff78 https://www.encodeproject.org/files/ENCFF234PWC/@@download/ENCFF234PWC.bigWig hg19 released borderline replicate concordance, low read depth mismatched status ENCFF513CNT bed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF576LFG, ENCFF820ZTK, ENCFF844TQX 165635 ENCODE Processing Pipeline 3db56811c1a96845e566ea81b37416ed https://www.encodeproject.org/files/ENCFF513CNT/@@download/ENCFF513CNT.bed.gz hg19 released borderline replicate concordance, low read depth mismatched status ENCFF359ZYF bigBed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF513CNT 349026 ENCODE Processing Pipeline bac2a5aabc40e036f30cb844a7756f42 https://www.encodeproject.org/files/ENCFF359ZYF/@@download/ENCFF359ZYF.bigBed hg19 released borderline replicate concordance, low read depth mismatched status ENCFF883CBQ bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF082GBO, ENCFF708IYO 626586590 ENCODE Processing Pipeline e1cf843392550497cf9dff7b972be8d6 https://www.encodeproject.org/files/ENCFF883CBQ/@@download/ENCFF883CBQ.bigWig hg19 released borderline replicate concordance, low read depth mismatched status ENCFF857HEZ bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF082GBO, ENCFF107VJA, ENCFF444TNY, ENCFF708IYO 1232371252 ENCODE Processing Pipeline 86ca61ac680c47c1f2cddeee0a5fcb0d https://www.encodeproject.org/files/ENCFF857HEZ/@@download/ENCFF857HEZ.bigWig hg19 released borderline replicate concordance, low read depth ENCFF281BEC bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF820ZTK 13096803 ENCODE Processing Pipeline f4d1527486ca9cea512644bb4cf8c0f4 https://www.encodeproject.org/files/ENCFF281BEC/@@download/ENCFF281BEC.bigBed hg19 released borderline replicate concordance, low read depth mismatched status ENCFF993ILX bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF576LFG 13234410 ENCODE Processing Pipeline 87d018cb32106bd08e459482a7ebf390 https://www.encodeproject.org/files/ENCFF993ILX/@@download/ENCFF993ILX.bigBed hg19 released borderline replicate concordance, low read depth ENCFF972LPT bed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF576LFG, ENCFF820ZTK, ENCFF844TQX 305539 ENCODE Processing Pipeline 1563fb6abad7b6e01e1a4b592835b343 https://www.encodeproject.org/files/ENCFF972LPT/@@download/ENCFF972LPT.bed.gz hg19 released borderline replicate concordance, low read depth mismatched status ENCFF578SVX bigBed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF972LPT 657998 ENCODE Processing Pipeline 2008e277d1642e83eaa1c6d01d55be17 https://www.encodeproject.org/files/ENCFF578SVX/@@download/ENCFF578SVX.bigBed hg19 released borderline replicate concordance, low read depth mismatched status ENCFF153EWU fastq reads ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 1 50 single-ended 1291127519 Richard Myers, HAIB b10bacd3eb94615bf9f342791f9cb364 SRA:SRR5338746 https://www.encodeproject.org/files/ENCFF153EWU/@@download/ENCFF153EWU.fastq.gz HiSeq 2000 /files/ENCFF820XYY/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF204ZXN fastq reads ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 1 50 single-ended 1244503897 Richard Myers, HAIB e3e8f50ca2dc999a2fd633a4696288ce SRA:SRR5338745 https://www.encodeproject.org/files/ENCFF204ZXN/@@download/ENCFF204ZXN.fastq.gz HiSeq 2000 /files/ENCFF002BGD/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF457VAD bam alignments ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 50 ENCFF153EWU, ENCFF807MUK 1059431046 ENCODE Processing Pipeline d228787f818823eabc76a8bf2cd9f2a4 https://www.encodeproject.org/files/ENCFF457VAD/@@download/ENCFF457VAD.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF901MQU bam alignments ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 50 ENCFF204ZXN, ENCFF807MUK 973262674 ENCODE Processing Pipeline fd1fcbcdad6c90d52bbd82e93231a4b6 https://www.encodeproject.org/files/ENCFF901MQU/@@download/ENCFF901MQU.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF838PDS bigWig signal p-value ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF419TYN, ENCFF457VAD, ENCFF901MQU, ENCFF925QJE 743943269 ENCODE Processing Pipeline a218c2c944880b7eed61819d31e466e9 https://www.encodeproject.org/files/ENCFF838PDS/@@download/ENCFF838PDS.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF803QZF bigWig fold change over control ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF419TYN, ENCFF457VAD, ENCFF901MQU, ENCFF925QJE 854910328 ENCODE Processing Pipeline 20c118a8e1dc06f9adbefec5529d452b https://www.encodeproject.org/files/ENCFF803QZF/@@download/ENCFF803QZF.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF472KYA bigWig signal p-value ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 ENCFF457VAD, ENCFF925QJE 487952852 ENCODE Processing Pipeline 4e7ea39e0218e2650ce7e6667568c4f0 https://www.encodeproject.org/files/ENCFF472KYA/@@download/ENCFF472KYA.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF519DTT bigWig signal p-value ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 ENCFF419TYN, ENCFF901MQU 436095038 ENCODE Processing Pipeline 9e07fea625dd0cc94d62256e4306ffaf https://www.encodeproject.org/files/ENCFF519DTT/@@download/ENCFF519DTT.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF554QBP bigWig fold change over control ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 ENCFF419TYN, ENCFF901MQU 364676648 ENCODE Processing Pipeline 6fa58ecd7a17e11febe54ab6594265fc https://www.encodeproject.org/files/ENCFF554QBP/@@download/ENCFF554QBP.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF137OKC bed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 ENCFF419TYN, ENCFF901MQU 5351871 ENCODE Processing Pipeline d1abd021e471634b526d8eec0cf160df https://www.encodeproject.org/files/ENCFF137OKC/@@download/ENCFF137OKC.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF457RQE bed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF419TYN, ENCFF457VAD, ENCFF901MQU, ENCFF925QJE 6358690 ENCODE Processing Pipeline b734252be3fbc3723a655be96a5d105f https://www.encodeproject.org/files/ENCFF457RQE/@@download/ENCFF457RQE.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF245CJT bigBed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 ENCFF048TGI 11019483 ENCODE Processing Pipeline 06613bc3c5ae77dddf229b9607a0b12d https://www.encodeproject.org/files/ENCFF245CJT/@@download/ENCFF245CJT.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF048TGI bed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 ENCFF457VAD, ENCFF925QJE 5117975 ENCODE Processing Pipeline bdacf9514d2b0baf47632a772a4cbbfa https://www.encodeproject.org/files/ENCFF048TGI/@@download/ENCFF048TGI.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF340HJN bigBed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 ENCFF137OKC 11051773 ENCODE Processing Pipeline 1fb3bab16859c8bace87b9e000d00286 https://www.encodeproject.org/files/ENCFF340HJN/@@download/ENCFF340HJN.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF213CEZ bigWig fold change over control ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 ENCFF457VAD, ENCFF925QJE 435763502 ENCODE Processing Pipeline c333a59820e81557eec02063fa7b57a6 https://www.encodeproject.org/files/ENCFF213CEZ/@@download/ENCFF213CEZ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF673ARM bigBed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF457RQE 13601722 ENCODE Processing Pipeline 59c9a0c6e7be6e65d24d2e173885c91d https://www.encodeproject.org/files/ENCFF673ARM/@@download/ENCFF673ARM.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF760LLP bam unfiltered alignments ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 50 ENCFF204ZXN, ENCFF643CGH 1325838187 ENCODE Processing Pipeline e5d4c3f58207e64f719bfb6ee5aa03cf https://www.encodeproject.org/files/ENCFF760LLP/@@download/ENCFF760LLP.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF861DPR bam unfiltered alignments ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 50 ENCFF153EWU, ENCFF643CGH 1384439907 ENCODE Processing Pipeline c96b4ed2685bbe592d5cdbdc64ee188c https://www.encodeproject.org/files/ENCFF861DPR/@@download/ENCFF861DPR.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF523HQR bam alignments ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 50 ENCFF204ZXN, ENCFF643CGH 973036120 ENCODE Processing Pipeline aa5f9318401f9d3bf50050f023288463 https://www.encodeproject.org/files/ENCFF523HQR/@@download/ENCFF523HQR.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF604ODF bam alignments ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 50 ENCFF153EWU, ENCFF643CGH 1059410205 ENCODE Processing Pipeline b1f51fd4f28b3c826293da86ed014e69 https://www.encodeproject.org/files/ENCFF604ODF/@@download/ENCFF604ODF.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF476IUK bigWig signal p-value ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 ENCFF604ODF, ENCFF715ECN 445135619 ENCODE Processing Pipeline 8162e00455d35e229797193980030755 https://www.encodeproject.org/files/ENCFF476IUK/@@download/ENCFF476IUK.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF418COA bigWig signal p-value ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 ENCFF113QYJ, ENCFF523HQR 382422093 ENCODE Processing Pipeline 3c6787b39c9ab1434af1d213828dbca3 https://www.encodeproject.org/files/ENCFF418COA/@@download/ENCFF418COA.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF141LNU bigWig signal p-value ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF113QYJ, ENCFF523HQR, ENCFF604ODF, ENCFF715ECN 918386121 ENCODE Processing Pipeline 9bf053962bee4d5b1bf71e39ab87dc4b https://www.encodeproject.org/files/ENCFF141LNU/@@download/ENCFF141LNU.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF412RLI bigWig fold change over control ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 ENCFF113QYJ, ENCFF523HQR 366425215 ENCODE Processing Pipeline f6663228ca45047e6792bc6e508d108d https://www.encodeproject.org/files/ENCFF412RLI/@@download/ENCFF412RLI.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF378BPO bigWig fold change over control ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 ENCFF604ODF, ENCFF715ECN 427082037 ENCODE Processing Pipeline d199abaf973d9864c9215807cf5aa774 https://www.encodeproject.org/files/ENCFF378BPO/@@download/ENCFF378BPO.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF614GXY bigWig fold change over control ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF113QYJ, ENCFF523HQR, ENCFF604ODF, ENCFF715ECN 853082997 ENCODE Processing Pipeline 38ed6a4e220cef27a3314f61dbe8be7f https://www.encodeproject.org/files/ENCFF614GXY/@@download/ENCFF614GXY.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF312UYU bigBed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF497SGD 13586715 ENCODE Processing Pipeline 25510f2076479b1784b38cd96fbca256 https://www.encodeproject.org/files/ENCFF312UYU/@@download/ENCFF312UYU.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF553LKY bed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 ENCFF113QYJ, ENCFF523HQR 5095584 ENCODE Processing Pipeline a934605f716f0208c86fa3b17651d8ef https://www.encodeproject.org/files/ENCFF553LKY/@@download/ENCFF553LKY.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF527LAX bigBed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 2 ENCFF553LKY 10859196 ENCODE Processing Pipeline 33b3b9db81efd4ed1e4f0cb854412739 https://www.encodeproject.org/files/ENCFF527LAX/@@download/ENCFF527LAX.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF497SGD bed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF113QYJ, ENCFF523HQR, ENCFF604ODF, ENCFF715ECN 6153676 ENCODE Processing Pipeline 169a34dfeaf37add1b99135135fbbf31 https://www.encodeproject.org/files/ENCFF497SGD/@@download/ENCFF497SGD.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF795UHX bed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 ENCFF604ODF, ENCFF715ECN 4911427 ENCODE Processing Pipeline 13231d9aae8f371d947a084cedea543e https://www.encodeproject.org/files/ENCFF795UHX/@@download/ENCFF795UHX.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF852MHW bed narrowPeak conservative idr thresholded peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF497SGD, ENCFF553LKY, ENCFF795UHX 253178 ENCODE Processing Pipeline 22ab6d7729d433c7a4f050fb64732969 https://www.encodeproject.org/files/ENCFF852MHW/@@download/ENCFF852MHW.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF055GBS bigBed narrowPeak conservative idr thresholded peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF852MHW 512140 ENCODE Processing Pipeline 7938e7ddbdc59f1dea6e8d8bb5f3800d https://www.encodeproject.org/files/ENCFF055GBS/@@download/ENCFF055GBS.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF753JZI bigBed narrowPeak optimal idr thresholded peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF928MIN 616736 ENCODE Processing Pipeline 998b452231daec7b7cc3f78be470035b https://www.encodeproject.org/files/ENCFF753JZI/@@download/ENCFF753JZI.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF227WVB bigBed narrowPeak peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1 ENCFF795UHX 10902138 ENCODE Processing Pipeline 09ea231d9e769c54a919a20e9c473b1a https://www.encodeproject.org/files/ENCFF227WVB/@@download/ENCFF227WVB.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF928MIN bed narrowPeak optimal idr thresholded peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF497SGD, ENCFF553LKY, ENCFF795UHX 327415 ENCODE Processing Pipeline 76b7072d3b602e80d79cc494981d5780 https://www.encodeproject.org/files/ENCFF928MIN/@@download/ENCFF928MIN.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF255JSE bed narrowPeak conservative idr thresholded peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF001TDO, ENCFF048TGI, ENCFF137OKC, ENCFF457RQE 228651 ENCODE Processing Pipeline a24b09d259b62354ac8cfc1921d74e60 https://www.encodeproject.org/files/ENCFF255JSE/@@download/ENCFF255JSE.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF428XZH bed narrowPeak optimal idr thresholded peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF001TDO, ENCFF048TGI, ENCFF137OKC, ENCFF457RQE 294047 ENCODE Processing Pipeline e491a3131d2ab3ff3d4fb2e3cb009822 https://www.encodeproject.org/files/ENCFF428XZH/@@download/ENCFF428XZH.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF629HJV bigBed narrowPeak optimal idr thresholded peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF428XZH 562806 ENCODE Processing Pipeline 18821f6ab15ca85803ff68458c4e04fe https://www.encodeproject.org/files/ENCFF629HJV/@@download/ENCFF629HJV.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF124NLL bigBed narrowPeak conservative idr thresholded peaks ENCSR444LIN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-08-10 ENCODE 1, 2 ENCFF255JSE 474963 ENCODE Processing Pipeline 6d2ec16938b37d2cd19df6ea0f38aac1 https://www.encodeproject.org/files/ENCFF124NLL/@@download/ENCFF124NLL.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF040XLF fastq reads ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 1 50 single-ended 1625724795 Richard Myers, HAIB 9426b610617a37280ab893405384fd8b https://www.encodeproject.org/files/ENCFF040XLF/@@download/ENCFF040XLF.fastq.gz HiSeq 2000 /files/ENCFF381LXJ/ released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF300NGT fastq reads ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 1 50 single-ended 1249794411 Richard Myers, HAIB 35f4e124e1c906be2c7098bce1eb2b0d SRA:SRR5331329 https://www.encodeproject.org/files/ENCFF300NGT/@@download/ENCFF300NGT.fastq.gz HiSeq 2000 /files/ENCFF752XCV/ released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF742ATC bam alignments ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 50 ENCFF040XLF, ENCFF807MUK 1280192595 ENCODE Processing Pipeline 24690e671e00a0aedade454c7a4f4a6a https://www.encodeproject.org/files/ENCFF742ATC/@@download/ENCFF742ATC.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF629SZV bam alignments ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 50 ENCFF300NGT, ENCFF807MUK 759028555 ENCODE Processing Pipeline ddc715907acfed09a1f86ead24a9a447 https://www.encodeproject.org/files/ENCFF629SZV/@@download/ENCFF629SZV.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF949MUR bigWig signal p-value ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 ENCFF423QHQ, ENCFF629SZV 583261571 ENCODE Processing Pipeline 2daaa582476e04f32fe887c4bd6f5e46 https://www.encodeproject.org/files/ENCFF949MUR/@@download/ENCFF949MUR.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF471CFX bigWig fold change over control ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 ENCFF742ATC, ENCFF853BBD 612795167 ENCODE Processing Pipeline 481675e5d5f4d89f6c447bb29a63d1dc https://www.encodeproject.org/files/ENCFF471CFX/@@download/ENCFF471CFX.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF329KUH bigWig fold change over control ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF423QHQ, ENCFF629SZV, ENCFF742ATC, ENCFF853BBD 1160173706 ENCODE Processing Pipeline f198fd670cf42ecfbeebfd0f1f7893b3 https://www.encodeproject.org/files/ENCFF329KUH/@@download/ENCFF329KUH.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF224PZN bed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF423QHQ, ENCFF629SZV, ENCFF742ATC, ENCFF853BBD 6319612 ENCODE Processing Pipeline e7ca76926aa69f029ebbd4836033ad0b https://www.encodeproject.org/files/ENCFF224PZN/@@download/ENCFF224PZN.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF334ZAY bigBed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF224PZN 11442034 ENCODE Processing Pipeline c67942e792139bb2bd77e52001bdd264 https://www.encodeproject.org/files/ENCFF334ZAY/@@download/ENCFF334ZAY.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF627DPA bed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 ENCFF742ATC, ENCFF853BBD 5535207 ENCODE Processing Pipeline e4cf89185ac34a2b95c92cdd4cb684b4 https://www.encodeproject.org/files/ENCFF627DPA/@@download/ENCFF627DPA.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF321JQC bed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 ENCFF423QHQ, ENCFF629SZV 5150689 ENCODE Processing Pipeline 0ff9e0014613f93f25fa441629d6bad6 https://www.encodeproject.org/files/ENCFF321JQC/@@download/ENCFF321JQC.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF934TPA bigBed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 ENCFF627DPA 11233604 ENCODE Processing Pipeline 05fc5a781a7bbdb63710220e6a19b7c2 https://www.encodeproject.org/files/ENCFF934TPA/@@download/ENCFF934TPA.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF793HHN bigWig fold change over control ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 ENCFF423QHQ, ENCFF629SZV 431477233 ENCODE Processing Pipeline 3cf4edf415087bfecbc975784118c416 https://www.encodeproject.org/files/ENCFF793HHN/@@download/ENCFF793HHN.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF307YSA bigBed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 ENCFF321JQC 11248994 ENCODE Processing Pipeline ba8653833ddac82686c82fe189f079ef https://www.encodeproject.org/files/ENCFF307YSA/@@download/ENCFF307YSA.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF609JQR bigWig signal p-value ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 ENCFF742ATC, ENCFF853BBD 729467454 ENCODE Processing Pipeline e0a32cc9d0febaa0e8c3133f8d35411a https://www.encodeproject.org/files/ENCFF609JQR/@@download/ENCFF609JQR.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF080VXX bigWig signal p-value ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF423QHQ, ENCFF629SZV, ENCFF742ATC, ENCFF853BBD 1362427088 ENCODE Processing Pipeline 2e64fd076d7d2042f27ddd60987d8f92 https://www.encodeproject.org/files/ENCFF080VXX/@@download/ENCFF080VXX.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF063HUM bam unfiltered alignments ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 50 ENCFF300NGT, ENCFF643CGH 1247054582 ENCODE Processing Pipeline df15f15558f07303394b3df9c5fde8cd https://www.encodeproject.org/files/ENCFF063HUM/@@download/ENCFF063HUM.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF657TOU bam unfiltered alignments ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 50 ENCFF040XLF, ENCFF643CGH 1745392068 ENCODE Processing Pipeline 26cd0b76aad08fdc7f10a3f5e45bde26 https://www.encodeproject.org/files/ENCFF657TOU/@@download/ENCFF657TOU.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF619YHC bam alignments ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 50 ENCFF300NGT, ENCFF643CGH 758680069 ENCODE Processing Pipeline 7010f0101a3076217e4e775d7a9a1d8a https://www.encodeproject.org/files/ENCFF619YHC/@@download/ENCFF619YHC.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF952VBJ bam alignments ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 50 ENCFF040XLF, ENCFF643CGH 1279802556 ENCODE Processing Pipeline b42fd64b2e060f8415271628d38b1401 https://www.encodeproject.org/files/ENCFF952VBJ/@@download/ENCFF952VBJ.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF909WJC bigWig fold change over control ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 ENCFF018PFX, ENCFF619YHC 447386039 ENCODE Processing Pipeline b3e82fd602f2683c5a01855c0782ba6c https://www.encodeproject.org/files/ENCFF909WJC/@@download/ENCFF909WJC.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF057HOC bigWig signal p-value ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 ENCFF667XXT, ENCFF952VBJ 807975147 ENCODE Processing Pipeline 6043cffc48b7aee4d0559780e8759e63 https://www.encodeproject.org/files/ENCFF057HOC/@@download/ENCFF057HOC.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF331LBS bigWig signal p-value ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 ENCFF018PFX, ENCFF619YHC 582753137 ENCODE Processing Pipeline 47189ff541aac65a2e5ba1286410f941 https://www.encodeproject.org/files/ENCFF331LBS/@@download/ENCFF331LBS.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF710HGC bigWig fold change over control ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 ENCFF667XXT, ENCFF952VBJ 612400612 ENCODE Processing Pipeline 247627fae7118ae24df8b9257a88197b https://www.encodeproject.org/files/ENCFF710HGC/@@download/ENCFF710HGC.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF381AYN bigWig signal p-value ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF018PFX, ENCFF619YHC, ENCFF667XXT, ENCFF952VBJ 1256313729 ENCODE Processing Pipeline 555825d9124a7b033a91066132120dde https://www.encodeproject.org/files/ENCFF381AYN/@@download/ENCFF381AYN.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF636YCB bigWig fold change over control ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF018PFX, ENCFF619YHC, ENCFF667XXT, ENCFF952VBJ 1159195093 ENCODE Processing Pipeline dc07bdcf103f879da95ed0df5ea67800 https://www.encodeproject.org/files/ENCFF636YCB/@@download/ENCFF636YCB.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF661VPD bed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF018PFX, ENCFF619YHC, ENCFF667XXT, ENCFF952VBJ 6165490 ENCODE Processing Pipeline 7c0d67d1388806f4ef308a1b62af1c45 https://www.encodeproject.org/files/ENCFF661VPD/@@download/ENCFF661VPD.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF921CNG bigBed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 ENCFF295GZL 11170645 ENCODE Processing Pipeline bebc048c9df7ef6f072bc3b49998b018 https://www.encodeproject.org/files/ENCFF921CNG/@@download/ENCFF921CNG.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF249NHN bigBed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF661VPD 11457248 ENCODE Processing Pipeline ebf1867014759ffe36de9bf887077b9e https://www.encodeproject.org/files/ENCFF249NHN/@@download/ENCFF249NHN.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF295GZL bed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1 ENCFF667XXT, ENCFF952VBJ 5313158 ENCODE Processing Pipeline 51edad55a2893da3734aae3193aa46e0 https://www.encodeproject.org/files/ENCFF295GZL/@@download/ENCFF295GZL.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF346PVR bed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 ENCFF018PFX, ENCFF619YHC 4902270 ENCODE Processing Pipeline 6d4b802d47b10d42421f64d5ce65212c https://www.encodeproject.org/files/ENCFF346PVR/@@download/ENCFF346PVR.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF159GJQ bigBed narrowPeak conservative idr thresholded peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF373WRI 127673 ENCODE Processing Pipeline a7214317fbed766feee13b150411815c https://www.encodeproject.org/files/ENCFF159GJQ/@@download/ENCFF159GJQ.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF823UNN bigBed narrowPeak optimal idr thresholded peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF496RVC 140286 ENCODE Processing Pipeline 780498a743d3f3a0dece4dfe6d1a20e0 https://www.encodeproject.org/files/ENCFF823UNN/@@download/ENCFF823UNN.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF496RVC bed narrowPeak optimal idr thresholded peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF295GZL, ENCFF346PVR, ENCFF419RSJ, ENCFF661VPD 48145 ENCODE Processing Pipeline af14a06da83a21f4a90a8ece8732f8ef https://www.encodeproject.org/files/ENCFF496RVC/@@download/ENCFF496RVC.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF373WRI bed narrowPeak conservative idr thresholded peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF295GZL, ENCFF346PVR, ENCFF419RSJ, ENCFF661VPD 39103 ENCODE Processing Pipeline de71db5de4ed75eb278c61f738fbdf10 https://www.encodeproject.org/files/ENCFF373WRI/@@download/ENCFF373WRI.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF774JQL bigBed narrowPeak peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 2 ENCFF346PVR 11136491 ENCODE Processing Pipeline b92e0f00fd45ab5d33f75bac71e83f5a https://www.encodeproject.org/files/ENCFF774JQL/@@download/ENCFF774JQL.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF007CUQ bigBed narrowPeak optimal idr thresholded peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF126PJF 131177 ENCODE Processing Pipeline 603d22e6d0b05fcaf0905bf3872abcd6 https://www.encodeproject.org/files/ENCFF007CUQ/@@download/ENCFF007CUQ.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF903FEF bigBed narrowPeak conservative idr thresholded peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF134TUC 96871 ENCODE Processing Pipeline 3309907e6752e741fbc2eaa2bba5a489 https://www.encodeproject.org/files/ENCFF903FEF/@@download/ENCFF903FEF.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF126PJF bed narrowPeak optimal idr thresholded peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF001TDO, ENCFF224PZN, ENCFF321JQC, ENCFF627DPA 42359 ENCODE Processing Pipeline 1cbb892e070ba237950c699124a9f18a https://www.encodeproject.org/files/ENCFF126PJF/@@download/ENCFF126PJF.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF134TUC bed narrowPeak conservative idr thresholded peaks ENCSR155VDK ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-04-25 ENCODE 1, 2 ENCFF001TDO, ENCFF224PZN, ENCFF321JQC, ENCFF627DPA 34013 ENCODE Processing Pipeline 56dcf8f2ad8fea021dee459e11bd9489 https://www.encodeproject.org/files/ENCFF134TUC/@@download/ENCFF134TUC.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, low read depth, moderate library complexity missing unfiltered alignments ENCFF193ROJ fastq reads ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 1 50 single-ended 1202152198 Richard Myers, HAIB e567ea15f567f5ec692f484000ef31b9 SRA:SRR5338979 https://www.encodeproject.org/files/ENCFF193ROJ/@@download/ENCFF193ROJ.fastq.gz HiSeq 2000 /files/ENCFF654JMO/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF163SRP fastq reads ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 1 50 single-ended 1587778011 Richard Myers, HAIB 97e80f67116433f1134124b0dc5901ef SRA:SRR5338978 https://www.encodeproject.org/files/ENCFF163SRP/@@download/ENCFF163SRP.fastq.gz HiSeq 2000 /files/ENCFF876NBT/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF170OKS bam alignments ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 50 ENCFF193ROJ, ENCFF807MUK 981766307 ENCODE Processing Pipeline 385cc7c1135d98edc161dce0c455042b https://www.encodeproject.org/files/ENCFF170OKS/@@download/ENCFF170OKS.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF764QOG bam alignments ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 50 ENCFF163SRP, ENCFF807MUK 1243310762 ENCODE Processing Pipeline 0d4dc63dcbc55967421626a20ce73cad https://www.encodeproject.org/files/ENCFF764QOG/@@download/ENCFF764QOG.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF201HCI bigWig signal p-value ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 ENCFF764QOG, ENCFF929OSU, ENCFF994YBV 989797023 ENCODE Processing Pipeline cc1f08c7ed9acd52465203ec544be416 https://www.encodeproject.org/files/ENCFF201HCI/@@download/ENCFF201HCI.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF164QZJ bigWig signal p-value ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 ENCFF170OKS, ENCFF929OSU, ENCFF994YBV 845242860 ENCODE Processing Pipeline 93d15ab130b3a5369c69365b448e9917 https://www.encodeproject.org/files/ENCFF164QZJ/@@download/ENCFF164QZJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF272PMU bigWig signal p-value ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF170OKS, ENCFF764QOG, ENCFF929OSU, ENCFF994YBV 1083614524 ENCODE Processing Pipeline 5e9d7d963a40e2819b7d2d596cc6cf9a https://www.encodeproject.org/files/ENCFF272PMU/@@download/ENCFF272PMU.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF213XUO bigWig fold change over control ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 ENCFF764QOG, ENCFF929OSU, ENCFF994YBV 790032227 ENCODE Processing Pipeline 22d217d3307c3fcc00b93b2fbb98b82f https://www.encodeproject.org/files/ENCFF213XUO/@@download/ENCFF213XUO.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF077XSE bigWig fold change over control ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 ENCFF170OKS, ENCFF929OSU, ENCFF994YBV 532069530 ENCODE Processing Pipeline 42e18eb26acea3e1c28c10b5abea5a9b https://www.encodeproject.org/files/ENCFF077XSE/@@download/ENCFF077XSE.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF208YII bigWig fold change over control ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF170OKS, ENCFF764QOG, ENCFF929OSU, ENCFF994YBV 1104576926 ENCODE Processing Pipeline 7f66757fa02847dce9d98012b62a5fc1 https://www.encodeproject.org/files/ENCFF208YII/@@download/ENCFF208YII.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF535NWA bed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 ENCFF764QOG, ENCFF929OSU, ENCFF994YBV 6324922 ENCODE Processing Pipeline 242eabd415c97eb62fbf4e139d9cbeb4 https://www.encodeproject.org/files/ENCFF535NWA/@@download/ENCFF535NWA.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF571MRI bed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 ENCFF170OKS, ENCFF929OSU, ENCFF994YBV 5938296 ENCODE Processing Pipeline 32e9b0c07560c1b1b9594be5438e31ae https://www.encodeproject.org/files/ENCFF571MRI/@@download/ENCFF571MRI.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF899MNG bed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF170OKS, ENCFF764QOG, ENCFF929OSU, ENCFF994YBV 6820228 ENCODE Processing Pipeline 4a3e000bb900b128775f929b93fe7019 https://www.encodeproject.org/files/ENCFF899MNG/@@download/ENCFF899MNG.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF796VTS bigBed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 ENCFF535NWA 13499828 ENCODE Processing Pipeline c78aefcff78c4e383bbda67d22db8701 https://www.encodeproject.org/files/ENCFF796VTS/@@download/ENCFF796VTS.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF740UKL bigBed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF899MNG 13485555 ENCODE Processing Pipeline a0e3f44dfa8830b6eee2db086deef7a2 https://www.encodeproject.org/files/ENCFF740UKL/@@download/ENCFF740UKL.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF745MWQ bigBed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 ENCFF571MRI 13509551 ENCODE Processing Pipeline 405c8a4f974474503ced02148be2df42 https://www.encodeproject.org/files/ENCFF745MWQ/@@download/ENCFF745MWQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF940PJL bam unfiltered alignments ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 50 ENCFF163SRP, ENCFF643CGH 1687447658 ENCODE Processing Pipeline 4baa3fb66ed0f2d973292ba29a59bf75 https://www.encodeproject.org/files/ENCFF940PJL/@@download/ENCFF940PJL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF877MJO bam unfiltered alignments ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 50 ENCFF193ROJ, ENCFF643CGH 1315485948 ENCODE Processing Pipeline f39c626bbe4a9285fffe781e68ade2c3 https://www.encodeproject.org/files/ENCFF877MJO/@@download/ENCFF877MJO.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF580GYQ bam alignments ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 50 ENCFF193ROJ, ENCFF643CGH 981640803 ENCODE Processing Pipeline 623cee7b4b178da1243a5c5d283d19d2 https://www.encodeproject.org/files/ENCFF580GYQ/@@download/ENCFF580GYQ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF171MMW bam alignments ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 50 ENCFF163SRP, ENCFF643CGH 1243002574 ENCODE Processing Pipeline c93b65d8c6b257c7b48cd309bb92fcaf https://www.encodeproject.org/files/ENCFF171MMW/@@download/ENCFF171MMW.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF260TZA bigWig signal p-value ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 ENCFF171MMW, ENCFF506QEL, ENCFF894EOG 1029274728 ENCODE Processing Pipeline 8c512cfe94ec4e80d6bd1e311d66a241 https://www.encodeproject.org/files/ENCFF260TZA/@@download/ENCFF260TZA.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF648GPD bigWig signal p-value ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 ENCFF506QEL, ENCFF580GYQ, ENCFF894EOG 868255724 ENCODE Processing Pipeline 93dfb4b47eed73194d42fdde9866a5ec https://www.encodeproject.org/files/ENCFF648GPD/@@download/ENCFF648GPD.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF554VBI bigWig signal p-value ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF171MMW, ENCFF506QEL, ENCFF580GYQ, ENCFF894EOG 1184564618 ENCODE Processing Pipeline 4b0ecf5bc1b22d47d06ad63ec9703bc8 https://www.encodeproject.org/files/ENCFF554VBI/@@download/ENCFF554VBI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF560KEF bigWig fold change over control ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 ENCFF171MMW, ENCFF506QEL, ENCFF894EOG 796513543 ENCODE Processing Pipeline 4e82a136fb97b7f15e6943aa6151e95e https://www.encodeproject.org/files/ENCFF560KEF/@@download/ENCFF560KEF.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF441EYT bigWig fold change over control ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 ENCFF506QEL, ENCFF580GYQ, ENCFF894EOG 556329903 ENCODE Processing Pipeline dc512dbb9613df613acf936ae06343fb https://www.encodeproject.org/files/ENCFF441EYT/@@download/ENCFF441EYT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF832BFI bigWig fold change over control ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF171MMW, ENCFF506QEL, ENCFF580GYQ, ENCFF894EOG 1102306453 ENCODE Processing Pipeline 634fa2ec07eff31393c99ea41db52f58 https://www.encodeproject.org/files/ENCFF832BFI/@@download/ENCFF832BFI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF687MRB bed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 ENCFF171MMW, ENCFF506QEL, ENCFF894EOG 6145455 ENCODE Processing Pipeline f04dbc17fe1296502a1704403e6c75c2 https://www.encodeproject.org/files/ENCFF687MRB/@@download/ENCFF687MRB.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF163FRZ bed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF171MMW, ENCFF506QEL, ENCFF580GYQ, ENCFF894EOG 6679200 ENCODE Processing Pipeline 268bec653bb9acf578df5a6f78151b77 https://www.encodeproject.org/files/ENCFF163FRZ/@@download/ENCFF163FRZ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF824FOH bigBed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1 ENCFF687MRB 13523462 ENCODE Processing Pipeline a77245670da3427dacb2bf703c98927f https://www.encodeproject.org/files/ENCFF824FOH/@@download/ENCFF824FOH.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF703KHN bigBed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF163FRZ 13525487 ENCODE Processing Pipeline 019d2c3842efd245806f13026fd8edb5 https://www.encodeproject.org/files/ENCFF703KHN/@@download/ENCFF703KHN.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF410WZD bed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 ENCFF506QEL, ENCFF580GYQ, ENCFF894EOG 5750998 ENCODE Processing Pipeline 71c7cadb9175b6a33d8bae3b8763e39c https://www.encodeproject.org/files/ENCFF410WZD/@@download/ENCFF410WZD.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF604LYK bigBed narrowPeak peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 2 ENCFF410WZD 11326862 ENCODE Processing Pipeline 5ed3cfacd316adc1a9cf3039cf87349e https://www.encodeproject.org/files/ENCFF604LYK/@@download/ENCFF604LYK.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF811HRZ bigBed narrowPeak optimal idr thresholded peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF097OXR 570015 ENCODE Processing Pipeline ca0a0584e37f09cad4422df69dc8f45d https://www.encodeproject.org/files/ENCFF811HRZ/@@download/ENCFF811HRZ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF097OXR bed narrowPeak optimal idr thresholded peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF163FRZ, ENCFF410WZD, ENCFF419RSJ, ENCFF687MRB 252924 ENCODE Processing Pipeline 082119cf2951b65a3aeb50b6014a2127 https://www.encodeproject.org/files/ENCFF097OXR/@@download/ENCFF097OXR.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF464IZM bed narrowPeak conservative idr thresholded peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF163FRZ, ENCFF410WZD, ENCFF419RSJ, ENCFF687MRB 193179 ENCODE Processing Pipeline d1c0a4627cf812a7978c059bde91b4aa https://www.encodeproject.org/files/ENCFF464IZM/@@download/ENCFF464IZM.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF617SCD bigBed narrowPeak conservative idr thresholded peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF464IZM 388756 ENCODE Processing Pipeline 11b240df70406d0bdd069fb5e533286d https://www.encodeproject.org/files/ENCFF617SCD/@@download/ENCFF617SCD.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF081YHC bed narrowPeak conservative idr thresholded peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF535NWA, ENCFF571MRI, ENCFF899MNG 164605 ENCODE Processing Pipeline 2765e9fa2f7fb384759382a55004d396 https://www.encodeproject.org/files/ENCFF081YHC/@@download/ENCFF081YHC.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF859RYN bigBed narrowPeak optimal idr thresholded peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF210DMP 414843 ENCODE Processing Pipeline 4645010561e75d032e689263e04a1e2c https://www.encodeproject.org/files/ENCFF859RYN/@@download/ENCFF859RYN.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF777QYH bigBed narrowPeak conservative idr thresholded peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF081YHC 348270 ENCODE Processing Pipeline 8fe3170d390c5ec69d1b3060e177ece3 https://www.encodeproject.org/files/ENCFF777QYH/@@download/ENCFF777QYH.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF210DMP bed narrowPeak optimal idr thresholded peaks ENCSR590CNM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens GATA4-human ENCAB000BPU DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF535NWA, ENCFF571MRI, ENCFF899MNG 213321 ENCODE Processing Pipeline 475820ca8d28d4a631ba7c8abc2cfa52 https://www.encodeproject.org/files/ENCFF210DMP/@@download/ENCFF210DMP.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF338QMC fastq reads ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 1 50 single-ended 1692816862 Richard Myers, HAIB 0926dec6f316252f767f556182878610 SRA:SRR5339594 https://www.encodeproject.org/files/ENCFF338QMC/@@download/ENCFF338QMC.fastq.gz HiSeq 2000 /files/ENCFF381LXJ/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF323JYW fastq reads ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 1 50 single-ended 1311682725 Richard Myers, HAIB 125bba5efa1d6eb328090b451286d95a SRA:SRR5339595 https://www.encodeproject.org/files/ENCFF323JYW/@@download/ENCFF323JYW.fastq.gz HiSeq 2000 /files/ENCFF752XCV/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF728PLX bam alignments ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 50 ENCFF323JYW, ENCFF807MUK 1085353508 ENCODE Processing Pipeline dcb128edd2f7fef282c7dd32b9aeabd4 https://www.encodeproject.org/files/ENCFF728PLX/@@download/ENCFF728PLX.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF360HZC bam alignments ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 50 ENCFF338QMC, ENCFF807MUK 1380961502 ENCODE Processing Pipeline 3d77b5e6ad9ace25a1f5b90b6518a89e https://www.encodeproject.org/files/ENCFF360HZC/@@download/ENCFF360HZC.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF841YSI bigWig signal p-value ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 ENCFF360HZC, ENCFF853BBD 745933226 ENCODE Processing Pipeline 607fb28f3c83e729806e212a19857ec8 https://www.encodeproject.org/files/ENCFF841YSI/@@download/ENCFF841YSI.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF705MGB bigWig signal p-value ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF360HZC, ENCFF423QHQ, ENCFF728PLX, ENCFF853BBD 1397036893 ENCODE Processing Pipeline fe6b017f860beb7fd34678eafb2daffe https://www.encodeproject.org/files/ENCFF705MGB/@@download/ENCFF705MGB.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF848IKC bigWig fold change over control ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 ENCFF360HZC, ENCFF853BBD 617766958 ENCODE Processing Pipeline 7ab0477547e0dd1735f5b5860f759c37 https://www.encodeproject.org/files/ENCFF848IKC/@@download/ENCFF848IKC.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF936YPZ bigBed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 ENCFF663NEE 13207837 ENCODE Processing Pipeline 82aa505275ba26833a14fbd2a6b99eae https://www.encodeproject.org/files/ENCFF936YPZ/@@download/ENCFF936YPZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF930TQF bigWig fold change over control ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF360HZC, ENCFF423QHQ, ENCFF728PLX, ENCFF853BBD 1312503988 ENCODE Processing Pipeline a4b91980ea5e7882d7c3bc8f97f040c5 https://www.encodeproject.org/files/ENCFF930TQF/@@download/ENCFF930TQF.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF278HXD bigBed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 ENCFF055PQZ 11302131 ENCODE Processing Pipeline 6e6b8944567df73787f3b61b27185f11 https://www.encodeproject.org/files/ENCFF278HXD/@@download/ENCFF278HXD.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF372YPM bigBed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF550XLN 13382288 ENCODE Processing Pipeline 648828eca201f1043077e1358abb3df7 https://www.encodeproject.org/files/ENCFF372YPM/@@download/ENCFF372YPM.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF764UVK bigWig fold change over control ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 ENCFF423QHQ, ENCFF728PLX 530750992 ENCODE Processing Pipeline 6ee5e1b1177b9172556225535e8ededf https://www.encodeproject.org/files/ENCFF764UVK/@@download/ENCFF764UVK.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF055PQZ bed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 ENCFF360HZC, ENCFF853BBD 5883152 ENCODE Processing Pipeline f8d5515a78518aeadbe36d0619397008 https://www.encodeproject.org/files/ENCFF055PQZ/@@download/ENCFF055PQZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF522YJN bigWig signal p-value ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 ENCFF423QHQ, ENCFF728PLX 720933039 ENCODE Processing Pipeline 4f3ddc8992f869321f8ea983b096b787 https://www.encodeproject.org/files/ENCFF522YJN/@@download/ENCFF522YJN.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF663NEE bed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 ENCFF423QHQ, ENCFF728PLX 6098875 ENCODE Processing Pipeline fe497ba7bd418d9567736e0ba2d93435 https://www.encodeproject.org/files/ENCFF663NEE/@@download/ENCFF663NEE.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF550XLN bed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF360HZC, ENCFF423QHQ, ENCFF728PLX, ENCFF853BBD 7018079 ENCODE Processing Pipeline 09367fe7c36c0f196360ad26e43ca8f1 https://www.encodeproject.org/files/ENCFF550XLN/@@download/ENCFF550XLN.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF338QKW bam unfiltered alignments ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 50 ENCFF323JYW, ENCFF643CGH 1423360311 ENCODE Processing Pipeline af5b179d0e106ca7924f7168459e5b72 https://www.encodeproject.org/files/ENCFF338QKW/@@download/ENCFF338QKW.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF440ASH bam unfiltered alignments ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 50 ENCFF338QMC, ENCFF643CGH 1815844682 ENCODE Processing Pipeline fbb3f9a893134b645642c58470d55899 https://www.encodeproject.org/files/ENCFF440ASH/@@download/ENCFF440ASH.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF188KZY bam alignments ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 50 ENCFF323JYW, ENCFF643CGH 1085042868 ENCODE Processing Pipeline c9e9a90f1a12e8a3d22f4ec96d050ae3 https://www.encodeproject.org/files/ENCFF188KZY/@@download/ENCFF188KZY.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF733CGU bam alignments ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 50 ENCFF338QMC, ENCFF643CGH 1380741053 ENCODE Processing Pipeline 1206ed8a6469f2a238483c21e49d992e https://www.encodeproject.org/files/ENCFF733CGU/@@download/ENCFF733CGU.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF338DWL bigWig signal p-value ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 ENCFF667XXT, ENCFF733CGU 783396915 ENCODE Processing Pipeline 04cc239a74ac5b8ddf182345795f6932 https://www.encodeproject.org/files/ENCFF338DWL/@@download/ENCFF338DWL.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF279VON bigWig signal p-value ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 ENCFF018PFX, ENCFF188KZY 671314777 ENCODE Processing Pipeline 028bc4d9926e7b3a57ea640a641fdfa7 https://www.encodeproject.org/files/ENCFF279VON/@@download/ENCFF279VON.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF893GZL bigWig signal p-value ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF018PFX, ENCFF188KZY, ENCFF667XXT, ENCFF733CGU 1312475859 ENCODE Processing Pipeline f68ed1e16c12966c87954b26eb5c560a https://www.encodeproject.org/files/ENCFF893GZL/@@download/ENCFF893GZL.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF840PGX bigWig fold change over control ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 ENCFF018PFX, ENCFF188KZY 515373551 ENCODE Processing Pipeline c29711b2de8dbf35f60fee1d9ad713d4 https://www.encodeproject.org/files/ENCFF840PGX/@@download/ENCFF840PGX.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF049LNQ bigWig fold change over control ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 ENCFF667XXT, ENCFF733CGU 669501406 ENCODE Processing Pipeline ba9a5a12673b2c287b7ea41c3d0797bf https://www.encodeproject.org/files/ENCFF049LNQ/@@download/ENCFF049LNQ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF201IMK bigWig fold change over control ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF018PFX, ENCFF188KZY, ENCFF667XXT, ENCFF733CGU 1265630690 ENCODE Processing Pipeline 8727f88482d764e2d553fd30a274c0a0 https://www.encodeproject.org/files/ENCFF201IMK/@@download/ENCFF201IMK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF462GSP bed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 ENCFF018PFX, ENCFF188KZY 5935315 ENCODE Processing Pipeline a35003ec39b231d82b9466f9b22be971 https://www.encodeproject.org/files/ENCFF462GSP/@@download/ENCFF462GSP.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF774DGU bed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF018PFX, ENCFF188KZY, ENCFF667XXT, ENCFF733CGU 6912143 ENCODE Processing Pipeline 03cd1923ccf41b1f69ab9ae9d73f4c3f https://www.encodeproject.org/files/ENCFF774DGU/@@download/ENCFF774DGU.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF818HEX bigBed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1 ENCFF462GSP 13204477 ENCODE Processing Pipeline 75433c18764d58d9d4f0a2bc2305125d https://www.encodeproject.org/files/ENCFF818HEX/@@download/ENCFF818HEX.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF235EXR bigBed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 ENCFF514YYG 11268444 ENCODE Processing Pipeline 13565ede28864b20aac592b5c8699998 https://www.encodeproject.org/files/ENCFF235EXR/@@download/ENCFF235EXR.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF514YYG bed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 2 ENCFF667XXT, ENCFF733CGU 5644817 ENCODE Processing Pipeline cca14cf79a6de0bed8b8053340dda318 https://www.encodeproject.org/files/ENCFF514YYG/@@download/ENCFF514YYG.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF521AXS bigBed narrowPeak peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF774DGU 13398247 ENCODE Processing Pipeline a6634ecb99ebe317970b1822c9e3096a https://www.encodeproject.org/files/ENCFF521AXS/@@download/ENCFF521AXS.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF307NNJ bigBed narrowPeak optimal idr thresholded peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF464QAL 411672 ENCODE Processing Pipeline 2e895d8f986314878075650ffc82702e https://www.encodeproject.org/files/ENCFF307NNJ/@@download/ENCFF307NNJ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF464QAL bed narrowPeak optimal idr thresholded peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF462GSP, ENCFF514YYG, ENCFF774DGU 205241 ENCODE Processing Pipeline 1dc750a0565891fdea24c456805bb8cc https://www.encodeproject.org/files/ENCFF464QAL/@@download/ENCFF464QAL.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF282PDD bigBed narrowPeak conservative idr thresholded peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF002VCK 285229 ENCODE Processing Pipeline e21d8c385558705770bba3ea9fbef42f https://www.encodeproject.org/files/ENCFF282PDD/@@download/ENCFF282PDD.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF002VCK bed narrowPeak conservative idr thresholded peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF462GSP, ENCFF514YYG, ENCFF774DGU 120282 ENCODE Processing Pipeline 1813f2f43ccda56ee127de3cbbb1ae62 https://www.encodeproject.org/files/ENCFF002VCK/@@download/ENCFF002VCK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF568LSV bed narrowPeak conservative idr thresholded peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF001TDO, ENCFF055PQZ, ENCFF550XLN, ENCFF663NEE 106127 ENCODE Processing Pipeline ed840930946f22d3f7138f6af0e98a2e https://www.encodeproject.org/files/ENCFF568LSV/@@download/ENCFF568LSV.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF909DWL bigBed narrowPeak conservative idr thresholded peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF568LSV 215323 ENCODE Processing Pipeline b4376a5b505998c3a3d3b1e19eab8bc4 https://www.encodeproject.org/files/ENCFF909DWL/@@download/ENCFF909DWL.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF040WYZ bigBed narrowPeak optimal idr thresholded peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF474AYD 364854 ENCODE Processing Pipeline 12f6c577e40b7bd7f6cd9662272ac98e https://www.encodeproject.org/files/ENCFF040WYZ/@@download/ENCFF040WYZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF474AYD bed narrowPeak optimal idr thresholded peaks ENCSR940MHE ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-08-10 ENCODE 1, 2 ENCFF001TDO, ENCFF055PQZ, ENCFF550XLN, ENCFF663NEE 173942 ENCODE Processing Pipeline fdf7e1b69b888cb6b0a2bf175391d18b https://www.encodeproject.org/files/ENCFF474AYD/@@download/ENCFF474AYD.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF000PIV bam alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PJJ 1267768251 Richard Myers, HAIB 01a13a04b37384512d2f2c4fd1661eec https://www.encodeproject.org/files/ENCFF000PIV/@@download/ENCFF000PIV.bam hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PIW bam alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PJD 911508637 Richard Myers, HAIB 7e58373ae4b5ba63e53657a075cbd9be https://www.encodeproject.org/files/ENCFF000PIW/@@download/ENCFF000PIW.bam hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PIY bigBed broadPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UGC 983531 Richard Myers, HAIB a834652b3f4951aa89e13005e311a9c1 https://www.encodeproject.org/files/ENCFF000PIY/@@download/ENCFF000PIY.bigBed hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PIZ bigBed broadPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UGD 275865 Richard Myers, HAIB a24b49a120baff1e7c783bc8d8bb2ca5 https://www.encodeproject.org/files/ENCFF000PIZ/@@download/ENCFF000PIZ.bigBed hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PJA bigWig raw signal ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 42998682 Richard Myers, HAIB 447cb9be56a8b2aa912a72fc813d3e7e https://www.encodeproject.org/files/ENCFF000PJA/@@download/ENCFF000PJA.bigWig hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PJB bigWig raw signal ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 16660596 Richard Myers, HAIB eeed49943c7f7e0232c5938559d60ce3 https://www.encodeproject.org/files/ENCFF000PJB/@@download/ENCFF000PJB.bigWig hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000PJD fastq reads ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 842610025 Richard Myers, HAIB d12be8163d12ace75c2f99a170cb51ff https://www.encodeproject.org/files/ENCFF000PJD/@@download/ENCFF000PJD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000PJJ fastq reads ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1248096714 Richard Myers, HAIB 1fba0d4468a5a8ed07851fd49ac7c11a https://www.encodeproject.org/files/ENCFF000PJJ/@@download/ENCFF000PJJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF001UGC bed broadPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 515234 Richard Myers, HAIB ffb41574d7a8932f29774d4172754568 https://www.encodeproject.org/files/ENCFF001UGC/@@download/ENCFF001UGC.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UGD bed broadPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 118058 Richard Myers, HAIB f01026be2b8394133bcc0690d336a6a9 https://www.encodeproject.org/files/ENCFF001UGD/@@download/ENCFF001UGD.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CKM bed narrowPeak optimal idr thresholded peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 448406 ENCODE Consortium Analysis Working Group 5ddcd742a555f8e2d7f1e61636550a9e https://www.encodeproject.org/files/ENCFF002CKM/@@download/ENCFF002CKM.bed.gz hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF349TNQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE ENCFF002CKM 1023426 ENCODE Consortium 844fc3469a4348cf5c4e001dd1f680d8 https://www.encodeproject.org/files/ENCFF349TNQ/@@download/ENCFF349TNQ.bigBed hg19 archived low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF940PJP bam unfiltered alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJD, ENCFF643CGH 1065312478 ENCODE Processing Pipeline ac3b3f84e088faffb939ec39361febfb https://www.encodeproject.org/files/ENCFF940PJP/@@download/ENCFF940PJP.bam GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF188GPG bam alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJD, ENCFF643CGH 514810980 ENCODE Processing Pipeline 55fca4a0e1247ece0b7456fab57fc2f2 https://www.encodeproject.org/files/ENCFF188GPG/@@download/ENCFF188GPG.bam GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF242RQW bam unfiltered alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJJ, ENCFF643CGH 1572732381 ENCODE Processing Pipeline c4ddfc2ab9bf4c2c573650eba4338227 https://www.encodeproject.org/files/ENCFF242RQW/@@download/ENCFF242RQW.bam GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF030DWK bam alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJJ, ENCFF643CGH 839594124 ENCODE Processing Pipeline 250a4614c5f1328c235f4075acafe40f https://www.encodeproject.org/files/ENCFF030DWK/@@download/ENCFF030DWK.bam GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF317TRQ bam unfiltered alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJJ, ENCFF807MUK 1568583723 ENCODE Processing Pipeline a1e0a286143463350562b3581729ddaf https://www.encodeproject.org/files/ENCFF317TRQ/@@download/ENCFF317TRQ.bam hg19 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF288PPP bam unfiltered alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJD, ENCFF807MUK 1061898427 ENCODE Processing Pipeline 0c9bb491562598b4275486912b19bb5e https://www.encodeproject.org/files/ENCFF288PPP/@@download/ENCFF288PPP.bam hg19 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF349ECU bam alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PJD, ENCFF807MUK 514903547 ENCODE Processing Pipeline f59f88313625d05453727022600099ae https://www.encodeproject.org/files/ENCFF349ECU/@@download/ENCFF349ECU.bam hg19 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF266XYT bam alignments ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PJJ, ENCFF807MUK 840004673 ENCODE Processing Pipeline 28246eeb3d58d40c137fd48104d6557d https://www.encodeproject.org/files/ENCFF266XYT/@@download/ENCFF266XYT.bam hg19 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF327OJH bigWig signal p-value ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF030DWK, ENCFF285LVE 416395456 ENCODE Processing Pipeline 761dbde793752e4d0dded804258751ba https://www.encodeproject.org/files/ENCFF327OJH/@@download/ENCFF327OJH.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF954OYS bigWig signal p-value ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF188GPG, ENCFF285LVE 400694150 ENCODE Processing Pipeline 91b0b6dc90e20f9ba550335b712253eb https://www.encodeproject.org/files/ENCFF954OYS/@@download/ENCFF954OYS.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF518SPY bigWig signal p-value ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF030DWK, ENCFF188GPG, ENCFF285LVE 578669662 ENCODE Processing Pipeline 6edd2c9f2a4f5dc3a79b75c745169280 https://www.encodeproject.org/files/ENCFF518SPY/@@download/ENCFF518SPY.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF858XQF bigWig fold change over control ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF030DWK, ENCFF285LVE 404614330 ENCODE Processing Pipeline f0a48db5a7a5b2576d8b87b7e2ec8fd6 https://www.encodeproject.org/files/ENCFF858XQF/@@download/ENCFF858XQF.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF097JHU bigWig fold change over control ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF188GPG, ENCFF285LVE 289490863 ENCODE Processing Pipeline 446b1420bb0ad8ba8d50866a85bdea29 https://www.encodeproject.org/files/ENCFF097JHU/@@download/ENCFF097JHU.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF792BDE bigWig fold change over control ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF030DWK, ENCFF188GPG, ENCFF285LVE 596002103 ENCODE Processing Pipeline 337acf8dff5747bbf770b1f7863db7ee https://www.encodeproject.org/files/ENCFF792BDE/@@download/ENCFF792BDE.bigWig GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF233LRK bed narrowPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF030DWK, ENCFF285LVE 5696177 ENCODE Processing Pipeline 5853a48e23bd8bf0924bd895ba261e0d https://www.encodeproject.org/files/ENCFF233LRK/@@download/ENCFF233LRK.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF066KKC bed narrowPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF188GPG, ENCFF285LVE 4241488 ENCODE Processing Pipeline a18228529461b3acd956a930f9ddd0b2 https://www.encodeproject.org/files/ENCFF066KKC/@@download/ENCFF066KKC.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF528RCQ bed narrowPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF030DWK, ENCFF188GPG, ENCFF285LVE 5949388 ENCODE Processing Pipeline aa47f618caf7446c5e80f994c243c043 https://www.encodeproject.org/files/ENCFF528RCQ/@@download/ENCFF528RCQ.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF560PXD bigBed narrowPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF233LRK 12995375 ENCODE Processing Pipeline 959a37544a2de4efae0c99d0f142a25e https://www.encodeproject.org/files/ENCFF560PXD/@@download/ENCFF560PXD.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF728ZKG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF176NJZ 541368 ENCODE Processing Pipeline 5380c6485154da52ed50b38c2fa3e3f0 https://www.encodeproject.org/files/ENCFF728ZKG/@@download/ENCFF728ZKG.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF429TMG bigBed narrowPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF066KKC 10141183 ENCODE Processing Pipeline b29a7591822e3896d993bf5678d94257 https://www.encodeproject.org/files/ENCFF429TMG/@@download/ENCFF429TMG.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF297MWK bigBed narrowPeak peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF528RCQ 13197536 ENCODE Processing Pipeline a4d49b94fe29a5d234ed053c4959ccac https://www.encodeproject.org/files/ENCFF297MWK/@@download/ENCFF297MWK.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF589GSN bed narrowPeak optimal idr thresholded peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF066KKC, ENCFF233LRK, ENCFF419RSJ, ENCFF528RCQ 467355 ENCODE Processing Pipeline c38af404556a17b40eeeeb8d334fe452 https://www.encodeproject.org/files/ENCFF589GSN/@@download/ENCFF589GSN.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF295EFP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF589GSN 910866 ENCODE Processing Pipeline ac7db7b37d9ede366b9f8795a66f13d6 https://www.encodeproject.org/files/ENCFF295EFP/@@download/ENCFF295EFP.bigBed GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF176NJZ bed narrowPeak conservative idr thresholded peaks ENCSR000BMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF066KKC, ENCFF233LRK, ENCFF419RSJ, ENCFF528RCQ 307158 ENCODE Processing Pipeline 4ca1d5d3f19bfa8ef7ccffe34b4529e8 https://www.encodeproject.org/files/ENCFF176NJZ/@@download/ENCFF176NJZ.bed.gz GRCh38 released low read depth, borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000RIM bam alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RIX 1044617300 Richard Myers, HAIB b67cc6bb2f38a3d63b57b29a682d3bd2 https://www.encodeproject.org/files/ENCFF000RIM/@@download/ENCFF000RIM.bam hg19 archived low read length biological replicates with identical biosample ENCFF000RIN bigBed broadPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001URL 751708 Richard Myers, HAIB 4dce85a0b5dee600af461acd55ed9d23 https://www.encodeproject.org/files/ENCFF000RIN/@@download/ENCFF000RIN.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000RIO bigBed broadPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001URM 1212192 Richard Myers, HAIB aab087d56c958c40aa8ed00f231bf647 https://www.encodeproject.org/files/ENCFF000RIO/@@download/ENCFF000RIO.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000RIP bam alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RIY 1074252141 Richard Myers, HAIB f6ee5e2f488844e24b1911b9d42478e0 https://www.encodeproject.org/files/ENCFF000RIP/@@download/ENCFF000RIP.bam hg19 archived low read length biological replicates with identical biosample ENCFF000RIQ bigWig raw signal ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 1 22346932 Richard Myers, HAIB 88ca3abf6ff84baf6319665d59180b82 https://www.encodeproject.org/files/ENCFF000RIQ/@@download/ENCFF000RIQ.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000RIS bigWig raw signal ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 1 36468681 Richard Myers, HAIB bab3d7b3c1863789cb6bb10d02296728 https://www.encodeproject.org/files/ENCFF000RIS/@@download/ENCFF000RIS.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000RIX fastq reads ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 951456733 Richard Myers, HAIB 8fbdaf8268e4c4ca89ef18689e2e381f https://www.encodeproject.org/files/ENCFF000RIX/@@download/ENCFF000RIX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RJV/ released low read length biological replicates with identical biosample ENCFF000RIY fastq reads ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 975582332 Richard Myers, HAIB a5bdb58fd1795b4015547de6289ebaab https://www.encodeproject.org/files/ENCFF000RIY/@@download/ENCFF000RIY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RJV/ released low read length biological replicates with identical biosample ENCFF001URL bed broadPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 1 454088 Richard Myers, HAIB 14da5b8ee61869bff9c8b2770639382a https://www.encodeproject.org/files/ENCFF001URL/@@download/ENCFF001URL.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF001URM bed broadPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 1 850443 Richard Myers, HAIB d9f69e5cbf5cacf5d4697f860385f48e https://www.encodeproject.org/files/ENCFF001URM/@@download/ENCFF001URM.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF002CNY bed narrowPeak optimal idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 712565 ENCODE Consortium Analysis Working Group 7e078e18057c41e9e2ed711465c152ab https://www.encodeproject.org/files/ENCFF002CNY/@@download/ENCFF002CNY.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF825MWK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE ENCFF002CNY 1412972 ENCODE Consortium d510ed5e8991032f066a2d25553b0828 https://www.encodeproject.org/files/ENCFF825MWK/@@download/ENCFF825MWK.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF478IDH bam unfiltered alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIX, ENCFF643CGH 1266945198 ENCODE Processing Pipeline 5f66c181e311d2a71d2825e48785ba64 https://www.encodeproject.org/files/ENCFF478IDH/@@download/ENCFF478IDH.bam GRCh38 released low read length biological replicates with identical biosample ENCFF458VET bam alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIY, ENCFF643CGH 831890910 ENCODE Processing Pipeline 0be1aa7120b784c406ba2d107cb9fcf3 https://www.encodeproject.org/files/ENCFF458VET/@@download/ENCFF458VET.bam GRCh38 released low read length biological replicates with identical biosample ENCFF600KCK bam alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIX, ENCFF643CGH 850094559 ENCODE Processing Pipeline 2af7b828958802631ccc099ba5360c2d https://www.encodeproject.org/files/ENCFF600KCK/@@download/ENCFF600KCK.bam GRCh38 released low read length biological replicates with identical biosample ENCFF676KGX bam unfiltered alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIY, ENCFF643CGH 1294110114 ENCODE Processing Pipeline 4ec3381c63b064e9691ce51318f07974 https://www.encodeproject.org/files/ENCFF676KGX/@@download/ENCFF676KGX.bam GRCh38 released low read length biological replicates with identical biosample ENCFF874VLY bam alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIX, ENCFF807MUK 850508700 ENCODE Processing Pipeline 47b75eca26ceec6851596e66983c85d3 https://www.encodeproject.org/files/ENCFF874VLY/@@download/ENCFF874VLY.bam hg19 released low read length biological replicates with identical biosample ENCFF838RLT bam unfiltered alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIX, ENCFF807MUK 1260897148 ENCODE Processing Pipeline 7ea4d04193180e91e853b4396e4d82eb https://www.encodeproject.org/files/ENCFF838RLT/@@download/ENCFF838RLT.bam hg19 released low read length biological replicates with identical biosample ENCFF357MBD bam unfiltered alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIY, ENCFF807MUK 1288164982 ENCODE Processing Pipeline 83a945785b1b0962e8a3873f84334fc1 https://www.encodeproject.org/files/ENCFF357MBD/@@download/ENCFF357MBD.bam hg19 released low read length biological replicates with identical biosample ENCFF963XWS bam alignments ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIY, ENCFF807MUK 832326223 ENCODE Processing Pipeline c4d6cfef39eaacd4e20e595d401cb911 https://www.encodeproject.org/files/ENCFF963XWS/@@download/ENCFF963XWS.bam hg19 released low read length biological replicates with identical biosample ENCFF428FHN bigWig signal p-value ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF503VFG, ENCFF600KCK 475963308 ENCODE Processing Pipeline 8a4f4631f0e9f93fafaf9d8d801951ee https://www.encodeproject.org/files/ENCFF428FHN/@@download/ENCFF428FHN.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF683BAB bigWig signal p-value ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF458VET, ENCFF503VFG 469407649 ENCODE Processing Pipeline 05a09537ebf0b731c19e4f4cf002fdc4 https://www.encodeproject.org/files/ENCFF683BAB/@@download/ENCFF683BAB.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF436ORW bigBed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF704HRH 11227037 ENCODE Processing Pipeline 553673a27b08a40860399eb81557bfeb https://www.encodeproject.org/files/ENCFF436ORW/@@download/ENCFF436ORW.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF633JVE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF574HSR 1567025 ENCODE Processing Pipeline bc432b681927eb4a982d24a596efcdaa https://www.encodeproject.org/files/ENCFF633JVE/@@download/ENCFF633JVE.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF520UBR bigWig signal p-value ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF458VET, ENCFF503VFG, ENCFF600KCK 592049900 ENCODE Processing Pipeline 8be1762ebc15d027cf2a6f59f3ab8f90 https://www.encodeproject.org/files/ENCFF520UBR/@@download/ENCFF520UBR.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF489HTM bigWig fold change over control ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF503VFG, ENCFF600KCK 431347819 ENCODE Processing Pipeline 34da1a2652aba1bcff963613b4ff7a22 https://www.encodeproject.org/files/ENCFF489HTM/@@download/ENCFF489HTM.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF818HAL bed narrowPeak conservative idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF218ZNM, ENCFF419RSJ, ENCFF500NNZ, ENCFF704HRH 657040 ENCODE Processing Pipeline 0c30b032823ac9babafd69a380c3e7f8 https://www.encodeproject.org/files/ENCFF818HAL/@@download/ENCFF818HAL.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF574HSR bed narrowPeak optimal idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF218ZNM, ENCFF419RSJ, ENCFF500NNZ, ENCFF704HRH 782192 ENCODE Processing Pipeline 846361e5886758970f6b959f035e7b44 https://www.encodeproject.org/files/ENCFF574HSR/@@download/ENCFF574HSR.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF179AGA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF818HAL 1108766 ENCODE Processing Pipeline 3eff8de4435ad2c92be25cd5da1a3a69 https://www.encodeproject.org/files/ENCFF179AGA/@@download/ENCFF179AGA.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF218ZNM bed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF458VET, ENCFF503VFG, ENCFF600KCK 6337963 ENCODE Processing Pipeline f3ec1db4ea0bb6cc270156c2507c2ffb https://www.encodeproject.org/files/ENCFF218ZNM/@@download/ENCFF218ZNM.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF519FOD bigWig fold change over control ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF458VET, ENCFF503VFG 427108499 ENCODE Processing Pipeline 2292205f2e97efdd54ade460edf4564a https://www.encodeproject.org/files/ENCFF519FOD/@@download/ENCFF519FOD.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF313EMB bigWig fold change over control ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF458VET, ENCFF503VFG, ENCFF600KCK 715340602 ENCODE Processing Pipeline 38f68c430b90af410c3ab12049bd42c8 https://www.encodeproject.org/files/ENCFF313EMB/@@download/ENCFF313EMB.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF704HRH bed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF503VFG, ENCFF600KCK 5413146 ENCODE Processing Pipeline 3a7f4e204aef2ccc2f7472d311edcde3 https://www.encodeproject.org/files/ENCFF704HRH/@@download/ENCFF704HRH.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF500NNZ bed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF458VET, ENCFF503VFG 5719944 ENCODE Processing Pipeline 93ca10a34daf0c37f592c1bdbe00a080 https://www.encodeproject.org/files/ENCFF500NNZ/@@download/ENCFF500NNZ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF752DFZ bigBed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF500NNZ 11276490 ENCODE Processing Pipeline 8e3a34c561f2d7022c45009842e83c6b https://www.encodeproject.org/files/ENCFF752DFZ/@@download/ENCFF752DFZ.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF303MXT bigBed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF218ZNM 13674167 ENCODE Processing Pipeline 22c56dfde31ac431c169800b952c7003 https://www.encodeproject.org/files/ENCFF303MXT/@@download/ENCFF303MXT.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF568SLD bigWig signal p-value ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF874VLY, ENCFF960JYT 539033476 ENCODE Processing Pipeline e0a088e4d473fe0cac6c7c2e4899c721 https://www.encodeproject.org/files/ENCFF568SLD/@@download/ENCFF568SLD.bigWig hg19 released low read length biological replicates with identical biosample ENCFF034FMY bigWig fold change over control ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF874VLY, ENCFF960JYT 434508420 ENCODE Processing Pipeline 2fd192fbea47dbf6ebe866fdde3645d7 https://www.encodeproject.org/files/ENCFF034FMY/@@download/ENCFF034FMY.bigWig hg19 released low read length biological replicates with identical biosample ENCFF997EFA bigWig signal p-value ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF960JYT, ENCFF963XWS 512474591 ENCODE Processing Pipeline 7b215a1173f82c482f5c0192499d6d18 https://www.encodeproject.org/files/ENCFF997EFA/@@download/ENCFF997EFA.bigWig hg19 released low read length biological replicates with identical biosample ENCFF575FPD bigWig signal p-value ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF874VLY, ENCFF960JYT, ENCFF963XWS 594874355 ENCODE Processing Pipeline 6eaa1f4653824e1621c9f02521d8b167 https://www.encodeproject.org/files/ENCFF575FPD/@@download/ENCFF575FPD.bigWig hg19 released low read length biological replicates with identical biosample ENCFF467NXU bigWig fold change over control ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF960JYT, ENCFF963XWS 427047156 ENCODE Processing Pipeline fc3aa9a877fbb1f540afee5f94fbd00e https://www.encodeproject.org/files/ENCFF467NXU/@@download/ENCFF467NXU.bigWig hg19 released low read length biological replicates with identical biosample ENCFF129RJN bigWig fold change over control ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF874VLY, ENCFF960JYT, ENCFF963XWS 719430707 ENCODE Processing Pipeline 9ad759e10b900909ee30c5dba4262a97 https://www.encodeproject.org/files/ENCFF129RJN/@@download/ENCFF129RJN.bigWig hg19 released low read length biological replicates with identical biosample ENCFF591LXN bed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF960JYT, ENCFF963XWS 5623587 ENCODE Processing Pipeline 21ce3cd93a859b9e3293d43edeb3b786 https://www.encodeproject.org/files/ENCFF591LXN/@@download/ENCFF591LXN.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF370FVF bed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF874VLY, ENCFF960JYT, ENCFF963XWS 6338785 ENCODE Processing Pipeline fbfa2dd309bc60232b8eb44093632d97 https://www.encodeproject.org/files/ENCFF370FVF/@@download/ENCFF370FVF.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF132WBC bed narrowPeak conservative idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF368ICR, ENCFF370FVF, ENCFF591LXN 657729 ENCODE Processing Pipeline ac635d6009e20b583137b2f68a5d4fce https://www.encodeproject.org/files/ENCFF132WBC/@@download/ENCFF132WBC.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF039NPQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF132WBC 1109842 ENCODE Processing Pipeline 988b6b2ff06b4c05e043a7be53323169 https://www.encodeproject.org/files/ENCFF039NPQ/@@download/ENCFF039NPQ.bigBed hg19 released low read length biological replicates with identical biosample ENCFF368ICR bed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF874VLY, ENCFF960JYT 5309367 ENCODE Processing Pipeline e7d2fb2df81ccb4cb6419371607adb70 https://www.encodeproject.org/files/ENCFF368ICR/@@download/ENCFF368ICR.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF239GRY bigBed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF368ICR 11096064 ENCODE Processing Pipeline 04ce0130298cdc9b5fc1aa8ff4d8678a https://www.encodeproject.org/files/ENCFF239GRY/@@download/ENCFF239GRY.bigBed hg19 released low read length biological replicates with identical biosample ENCFF058XAD bed narrowPeak optimal idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF368ICR, ENCFF370FVF, ENCFF591LXN 775431 ENCODE Processing Pipeline 0698eb75edf612f795a48307b318d11f https://www.encodeproject.org/files/ENCFF058XAD/@@download/ENCFF058XAD.bed.gz hg19 released low read length biological replicates with identical biosample ENCFF387EZX bigBed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF591LXN 11156219 ENCODE Processing Pipeline 89828290ab73df61b712343f47856f6e https://www.encodeproject.org/files/ENCFF387EZX/@@download/ENCFF387EZX.bigBed hg19 released low read length biological replicates with identical biosample ENCFF130WJK bigBed narrowPeak peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF370FVF 13672201 ENCODE Processing Pipeline 157e2e469f1bcd9d346b71ae5eab16b7 https://www.encodeproject.org/files/ENCFF130WJK/@@download/ENCFF130WJK.bigBed hg19 released low read length biological replicates with identical biosample ENCFF627NWT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMX ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide GATA3-human ENCAB000AGY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF058XAD 1553349 ENCODE Processing Pipeline fe1ef77b489b5223528f594b9c6d07d3 https://www.encodeproject.org/files/ENCFF627NWT/@@download/ENCFF627NWT.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000OTC bam alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OTO 703867849 Richard Myers, HAIB c61d83700ac2f5e8d56ccc2125c11eca https://www.encodeproject.org/files/ENCFF000OTC/@@download/ENCFF000OTC.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OTD bigBed broadPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCI 137581 Richard Myers, HAIB 206b5b8c125e51fa83618250afb13eb9 https://www.encodeproject.org/files/ENCFF000OTD/@@download/ENCFF000OTD.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OTE bigBed broadPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCJ 121250 Richard Myers, HAIB 7d127c22bc6bac91bfa87754fb3e041d https://www.encodeproject.org/files/ENCFF000OTE/@@download/ENCFF000OTE.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OTF bam alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OTR 799904419 Richard Myers, HAIB 5f6bee8dc88615c13f237dc74fd66b9a https://www.encodeproject.org/files/ENCFF000OTF/@@download/ENCFF000OTF.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OTH bigWig raw signal ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 3343504 Richard Myers, HAIB 62ce5511eafb2037560ad057080afd46 https://www.encodeproject.org/files/ENCFF000OTH/@@download/ENCFF000OTH.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OTI bigWig raw signal ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 4131423 Richard Myers, HAIB da4be0aa3c935a426eb777fa45d78ceb https://www.encodeproject.org/files/ENCFF000OTI/@@download/ENCFF000OTI.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OTO fastq reads ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 658029629 Richard Myers, HAIB a6dbb7d86237603417779c2bc20f66b5 https://www.encodeproject.org/files/ENCFF000OTO/@@download/ENCFF000OTO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OTR fastq reads ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 887703055 Richard Myers, HAIB c605430d1949920e9f47eefeb6af17ab https://www.encodeproject.org/files/ENCFF000OTR/@@download/ENCFF000OTR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UCI bed broadPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 48058 Richard Myers, HAIB 31f2d3cefa7db6d2d71222e601eff638 https://www.encodeproject.org/files/ENCFF001UCI/@@download/ENCFF001UCI.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UCJ bed broadPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 35574 Richard Myers, HAIB 164dbf1adb9dfb0c58ad110de5a70a1e https://www.encodeproject.org/files/ENCFF001UCJ/@@download/ENCFF001UCJ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CJJ bed narrowPeak optimal idr thresholded peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 74149 ENCODE Consortium Analysis Working Group bcd6754c04414593085c871e04823a05 https://www.encodeproject.org/files/ENCFF002CJJ/@@download/ENCFF002CJJ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF736VCS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE ENCFF002CJJ 192237 ENCODE Consortium 11d113ce6888a1198e19f79ea0831541 https://www.encodeproject.org/files/ENCFF736VCS/@@download/ENCFF736VCS.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF105GPY bam unfiltered alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTO, ENCFF643CGH 858715265 ENCODE Processing Pipeline 7e1944c06d4c6eee692a52c05b97661a https://www.encodeproject.org/files/ENCFF105GPY/@@download/ENCFF105GPY.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF892YBG bam alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTO, ENCFF643CGH 518254704 ENCODE Processing Pipeline e8e32d6de18fa7d81dfafb828780c675 https://www.encodeproject.org/files/ENCFF892YBG/@@download/ENCFF892YBG.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF488UYN bam unfiltered alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTR, ENCFF643CGH 1125902631 ENCODE Processing Pipeline d3cf9431106aadad8ba9869024a391a0 https://www.encodeproject.org/files/ENCFF488UYN/@@download/ENCFF488UYN.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF588EKB bam alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTR, ENCFF643CGH 600799946 ENCODE Processing Pipeline e2233178b7eafeda1bf7c9e73d7847a5 https://www.encodeproject.org/files/ENCFF588EKB/@@download/ENCFF588EKB.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF444WHJ bam unfiltered alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTO, ENCFF807MUK 855847604 ENCODE Processing Pipeline 131ff6bbb363cf5a5a21d6920769512b https://www.encodeproject.org/files/ENCFF444WHJ/@@download/ENCFF444WHJ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF503ZQQ bam alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTO, ENCFF807MUK 518679431 ENCODE Processing Pipeline 0d2a773496914faa4113d3cb9b66b3cd https://www.encodeproject.org/files/ENCFF503ZQQ/@@download/ENCFF503ZQQ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF862EPZ bam unfiltered alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTR, ENCFF807MUK 1121745348 ENCODE Processing Pipeline add597fff47cf54c6cf84ace53ad52fb https://www.encodeproject.org/files/ENCFF862EPZ/@@download/ENCFF862EPZ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF184JSZ bam alignments ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTR, ENCFF807MUK 601153343 ENCODE Processing Pipeline a5abdfa13c65f62179f0317a93ebd2f4 https://www.encodeproject.org/files/ENCFF184JSZ/@@download/ENCFF184JSZ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF321ACV bigWig signal p-value ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF892YBG 334828172 ENCODE Processing Pipeline f8f31a7793f482fe44b00789fc9a807a https://www.encodeproject.org/files/ENCFF321ACV/@@download/ENCFF321ACV.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF481FYX bigWig signal p-value ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF588EKB 354762479 ENCODE Processing Pipeline 1de687eceaac6965a7c0f75a6c448622 https://www.encodeproject.org/files/ENCFF481FYX/@@download/ENCFF481FYX.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF787UNR bigWig signal p-value ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF588EKB, ENCFF892YBG 506592635 ENCODE Processing Pipeline aeee33c5cae65f6a9e0e0a47a2037f68 https://www.encodeproject.org/files/ENCFF787UNR/@@download/ENCFF787UNR.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF737SHB bigWig fold change over control ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF892YBG 248981643 ENCODE Processing Pipeline a4d4b9327d4ea27d79c42d493781d1de https://www.encodeproject.org/files/ENCFF737SHB/@@download/ENCFF737SHB.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF665USC bigWig fold change over control ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF588EKB, ENCFF892YBG 478767953 ENCODE Processing Pipeline de3daa734d94fc0822b07f478274375f https://www.encodeproject.org/files/ENCFF665USC/@@download/ENCFF665USC.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF028IYH bigWig fold change over control ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF588EKB 294201697 ENCODE Processing Pipeline 1167e974e11e64078d82523291694808 https://www.encodeproject.org/files/ENCFF028IYH/@@download/ENCFF028IYH.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF422HXW bigBed narrowPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF584FLP 10904992 ENCODE Processing Pipeline 1069d599f9adde9c524ecce66bc3b912 https://www.encodeproject.org/files/ENCFF422HXW/@@download/ENCFF422HXW.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF463CUD bed narrowPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF892YBG 3748451 ENCODE Processing Pipeline b38544b2bf5119974975ce145f4d0a1f https://www.encodeproject.org/files/ENCFF463CUD/@@download/ENCFF463CUD.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF226NUI bed narrowPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF588EKB 3546383 ENCODE Processing Pipeline 2be5c1221849e3bb40d06c7b3af0fd4b https://www.encodeproject.org/files/ENCFF226NUI/@@download/ENCFF226NUI.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF584FLP bed narrowPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF588EKB, ENCFF892YBG 4095493 ENCODE Processing Pipeline f9f68c7a9f60c0c75ce0621c5622ed9a https://www.encodeproject.org/files/ENCFF584FLP/@@download/ENCFF584FLP.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF822PXT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF510ZPK 131435 ENCODE Processing Pipeline 27d6175ad86951afbcdf42472b316678 https://www.encodeproject.org/files/ENCFF822PXT/@@download/ENCFF822PXT.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF799LSD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF644BNN 139707 ENCODE Processing Pipeline de86961dbe94824982f49010cb7c9a01 https://www.encodeproject.org/files/ENCFF799LSD/@@download/ENCFF799LSD.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF197KGY bigBed narrowPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF463CUD 8167782 ENCODE Processing Pipeline 98fa0de826c22c1b7e0d1a72fd04fcbc https://www.encodeproject.org/files/ENCFF197KGY/@@download/ENCFF197KGY.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF644BNN bed narrowPeak optimal idr thresholded peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF226NUI, ENCFF419RSJ, ENCFF463CUD, ENCFF584FLP 58211 ENCODE Processing Pipeline ef33160da1dbc7d345f7eb36065717f9 https://www.encodeproject.org/files/ENCFF644BNN/@@download/ENCFF644BNN.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF123ZIY bigBed narrowPeak peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF226NUI 7820688 ENCODE Processing Pipeline dc90b8de9f0050e4ba3f091bc62c5bdf https://www.encodeproject.org/files/ENCFF123ZIY/@@download/ENCFF123ZIY.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF510ZPK bed narrowPeak conservative idr thresholded peaks ENCSR000BIQ ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF226NUI, ENCFF419RSJ, ENCFF463CUD, ENCFF584FLP 51759 ENCODE Processing Pipeline 2cb47143b4196f2cd9eb0ba7d067b4bb https://www.encodeproject.org/files/ENCFF510ZPK/@@download/ENCFF510ZPK.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PZZ bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QAL 765319059 Richard Myers, HAIB ddbd54812e5794dd62ef758618e09655 https://www.encodeproject.org/files/ENCFF000PZZ/@@download/ENCFF000PZZ.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QAA bigBed broadPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJX 254343 Richard Myers, HAIB 1cc8f51d4a8523fe7081203f0e901ee0 https://www.encodeproject.org/files/ENCFF000QAA/@@download/ENCFF000QAA.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QAB bigBed broadPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJY 226367 Richard Myers, HAIB 172d412d09e5e88ea05bb67090d76a88 https://www.encodeproject.org/files/ENCFF000QAB/@@download/ENCFF000QAB.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QAC bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QAN 933796196 Richard Myers, HAIB 208677645a984da9a2786a5047116511 https://www.encodeproject.org/files/ENCFF000QAC/@@download/ENCFF000QAC.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QAE bigWig raw signal ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 13856974 Richard Myers, HAIB c3f1ec2ea509ea10a26ace4aa4aa5326 https://www.encodeproject.org/files/ENCFF000QAE/@@download/ENCFF000QAE.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QAF bigWig raw signal ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 16661535 Richard Myers, HAIB 16cf0813795ad87258524073682a6c95 https://www.encodeproject.org/files/ENCFF000QAF/@@download/ENCFF000QAF.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QAL fastq reads ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 789376608 Richard Myers, HAIB 2448e426990efd4fe723bbd0c6f02a0a https://www.encodeproject.org/files/ENCFF000QAL/@@download/ENCFF000QAL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QAN fastq reads ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 883394294 Richard Myers, HAIB 77acbd427d49930a5c9e77fa6e0c16d2 https://www.encodeproject.org/files/ENCFF000QAN/@@download/ENCFF000QAN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF001UJX bed broadPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 142787 Richard Myers, HAIB 50ce1e7b3fd0ea77c64d6b39ab4a5436 https://www.encodeproject.org/files/ENCFF001UJX/@@download/ENCFF001UJX.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF001UJY bed broadPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 108358 Richard Myers, HAIB 3cdcf7db6de37033de07a16ab10b5f3b https://www.encodeproject.org/files/ENCFF001UJY/@@download/ENCFF001UJY.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CLY bed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 224220 ENCODE Consortium Analysis Working Group 542fee5cc2b0c4d57b8021a3254e21f6 https://www.encodeproject.org/files/ENCFF002CLY/@@download/ENCFF002CLY.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF478IQC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE ENCFF002CLY 482965 ENCODE Consortium b84359348997a144666fa8a2ea38ec9e https://www.encodeproject.org/files/ENCFF478IQC/@@download/ENCFF478IQC.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF805FJI bam unfiltered alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAN, ENCFF643CGH 1121167385 ENCODE Processing Pipeline 8699417a2c9f8f70b3658eec61eacf8d https://www.encodeproject.org/files/ENCFF805FJI/@@download/ENCFF805FJI.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF492NUF bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAN, ENCFF643CGH 509906295 ENCODE Processing Pipeline 7655c43c866a6fe655cb897434d78fca https://www.encodeproject.org/files/ENCFF492NUF/@@download/ENCFF492NUF.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF658FMT bam unfiltered alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAL, ENCFF643CGH 997483250 ENCODE Processing Pipeline 389a119ecd82e34c7eb68a624a4ae74a https://www.encodeproject.org/files/ENCFF658FMT/@@download/ENCFF658FMT.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF561ILM bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAL, ENCFF643CGH 425489056 ENCODE Processing Pipeline 45ef8500ed3bd5cfd374344dd5a33457 https://www.encodeproject.org/files/ENCFF561ILM/@@download/ENCFF561ILM.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF788KZO bam unfiltered alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAL, ENCFF807MUK 995805098 ENCODE Processing Pipeline 3228dd9ebd28433c645623b25995f74a https://www.encodeproject.org/files/ENCFF788KZO/@@download/ENCFF788KZO.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF757JWB bam unfiltered alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAN, ENCFF807MUK 1117129368 ENCODE Processing Pipeline 499e43658c65d3078c60d2389e0197ed https://www.encodeproject.org/files/ENCFF757JWB/@@download/ENCFF757JWB.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF846HET bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAL, ENCFF807MUK 425775732 ENCODE Processing Pipeline b4f46eb04e7a9c6d84feca0d2c80b88f https://www.encodeproject.org/files/ENCFF846HET/@@download/ENCFF846HET.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF670JGI bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAN, ENCFF807MUK 510329046 ENCODE Processing Pipeline c87cb41a41094e133dd0b0b1003606e2 https://www.encodeproject.org/files/ENCFF670JGI/@@download/ENCFF670JGI.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF818UTO bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF561ILM, ENCFF772PJM 212540029 ENCODE Processing Pipeline 49eff6cf6e3dd3ee537ed422d5bf5071 https://www.encodeproject.org/files/ENCFF818UTO/@@download/ENCFF818UTO.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF957ZYR bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF492NUF, ENCFF772PJM 213449561 ENCODE Processing Pipeline c140f71d42e8e336afc21d48b84641e8 https://www.encodeproject.org/files/ENCFF957ZYR/@@download/ENCFF957ZYR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF115YDK bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF561ILM, ENCFF772PJM 178031545 ENCODE Processing Pipeline 52431defaac31a23241606672efb395b https://www.encodeproject.org/files/ENCFF115YDK/@@download/ENCFF115YDK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF922VNF bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF492NUF, ENCFF561ILM, ENCFF772PJM 205486527 ENCODE Processing Pipeline 72bc11fffce7e891152d7f78dcaf24de https://www.encodeproject.org/files/ENCFF922VNF/@@download/ENCFF922VNF.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF656XBC bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF492NUF, ENCFF772PJM 208728098 ENCODE Processing Pipeline d71fa2db10ac6268153cfbceac43c3a2 https://www.encodeproject.org/files/ENCFF656XBC/@@download/ENCFF656XBC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF331ETG bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF492NUF, ENCFF561ILM, ENCFF772PJM 349867052 ENCODE Processing Pipeline a6ed471b6c016e713f3f15135b9b8535 https://www.encodeproject.org/files/ENCFF331ETG/@@download/ENCFF331ETG.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF207LLP bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF492NUF, ENCFF772PJM 494144 ENCODE Processing Pipeline c321c718396e5d2467e8c181b356c426 https://www.encodeproject.org/files/ENCFF207LLP/@@download/ENCFF207LLP.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF794OXE bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF352JPL 10430711 ENCODE Processing Pipeline 0c68e40cf9fb3ce97249955c9a352a73 https://www.encodeproject.org/files/ENCFF794OXE/@@download/ENCFF794OXE.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF323IRR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF503LMD 222180 ENCODE Processing Pipeline 1f62c5cc2168b8e96c8fa66d355fd750 https://www.encodeproject.org/files/ENCFF323IRR/@@download/ENCFF323IRR.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF352JPL bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF492NUF, ENCFF561ILM, ENCFF772PJM 4491619 ENCODE Processing Pipeline 175287546de0fdd307d11f0842a13d9f https://www.encodeproject.org/files/ENCFF352JPL/@@download/ENCFF352JPL.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF087MFG bed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF207LLP, ENCFF267ADF, ENCFF352JPL, ENCFF419RSJ 133901 ENCODE Processing Pipeline 275db6953ea2392131ba3492abb1019d https://www.encodeproject.org/files/ENCFF087MFG/@@download/ENCFF087MFG.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF140HWC bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF267ADF 9624527 ENCODE Processing Pipeline a85e266088b8e0a62bcc8842e48e0bdf https://www.encodeproject.org/files/ENCFF140HWC/@@download/ENCFF140HWC.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF267ADF bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF561ILM, ENCFF772PJM 3912102 ENCODE Processing Pipeline 0f6f72bcf3c57674363b47f59e42154d https://www.encodeproject.org/files/ENCFF267ADF/@@download/ENCFF267ADF.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF578CYI bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF207LLP 1066596 ENCODE Processing Pipeline 714ac22445f1eecd4a9766a52df85d09 https://www.encodeproject.org/files/ENCFF578CYI/@@download/ENCFF578CYI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF503LMD bed narrowPeak conservative idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF207LLP, ENCFF267ADF, ENCFF352JPL, ENCFF419RSJ 102798 ENCODE Processing Pipeline 4add319a620d323eea8eab45d5b272e0 https://www.encodeproject.org/files/ENCFF503LMD/@@download/ENCFF503LMD.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF050JOS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF087MFG 263599 ENCODE Processing Pipeline 5b4d98642d65dd0966f71003f6142a27 https://www.encodeproject.org/files/ENCFF050JOS/@@download/ENCFF050JOS.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF918QWX fastq reads ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 1 ENCFF471FTR 2175416884 Richard Myers, HAIB 5c1924a7d66b31c2f8f504639e140e60 SRA:SRR6213971 https://www.encodeproject.org/files/ENCFF918QWX/@@download/ENCFF918QWX.fastq.gz HiSeq 2000 /files/ENCFF502QEU/ released antibody characterized with exemption ENCFF471FTR fastq reads ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 1 76 paired-ended 2 ENCFF918QWX 2272776798 Richard Myers, HAIB ea1622f57c8e90f5286885fa82677cf2 SRA:SRR6213971 https://www.encodeproject.org/files/ENCFF471FTR/@@download/ENCFF471FTR.fastq.gz HiSeq 2000 /files/ENCFF495BLX/ released antibody characterized with exemption ENCFF526TYR bam unfiltered alignments ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF471FTR, ENCFF643CGH, ENCFF918QWX 5302401228 ENCODE Processing Pipeline 1dfdd9254e29c7a881b9420c39331ea6 https://www.encodeproject.org/files/ENCFF526TYR/@@download/ENCFF526TYR.bam GRCh38 released antibody characterized with exemption ENCFF359AXT bam unfiltered alignments ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF471FTR, ENCFF807MUK, ENCFF918QWX 5279618935 ENCODE Processing Pipeline a56294427c216264cbdb450f72691408 https://www.encodeproject.org/files/ENCFF359AXT/@@download/ENCFF359AXT.bam hg19 released antibody characterized with exemption ENCFF765ZZI bam alignments ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF471FTR, ENCFF643CGH, ENCFF918QWX 3463742759 ENCODE Processing Pipeline 33a031f9e4fc24960f20622adbd23a14 https://www.encodeproject.org/files/ENCFF765ZZI/@@download/ENCFF765ZZI.bam GRCh38 released antibody characterized with exemption ENCFF698NVU bam alignments ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 76 ENCFF471FTR, ENCFF807MUK, ENCFF918QWX 3461342070 ENCODE Processing Pipeline 4c3cd832d6ed2fc6d26c0adf2a2dfd45 https://www.encodeproject.org/files/ENCFF698NVU/@@download/ENCFF698NVU.bam hg19 released antibody characterized with exemption ENCFF021CMC bigWig signal p-value ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF194FBM, ENCFF765ZZI 1367708550 ENCODE Processing Pipeline b0bd05c9864284ac7f089a5abd2dd692 https://www.encodeproject.org/files/ENCFF021CMC/@@download/ENCFF021CMC.bigWig GRCh38 released antibody characterized with exemption ENCFF249ABO bigWig fold change over control ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF194FBM, ENCFF765ZZI 1181036526 ENCODE Processing Pipeline c84a6723d1d7498e346527189f261a31 https://www.encodeproject.org/files/ENCFF249ABO/@@download/ENCFF249ABO.bigWig GRCh38 released antibody characterized with exemption ENCFF629UPV bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF419RSJ, ENCFF809RZH 537062 ENCODE Processing Pipeline c6af5bea9055cb38d8fdcec2bf82e4e3 https://www.encodeproject.org/files/ENCFF629UPV/@@download/ENCFF629UPV.bed.gz GRCh38 released antibody characterized with exemption ENCFF147KAV bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF629UPV 1116019 ENCODE Processing Pipeline f86f1390a53091ee32a50e956a63db6e https://www.encodeproject.org/files/ENCFF147KAV/@@download/ENCFF147KAV.bigBed GRCh38 released antibody characterized with exemption ENCFF809RZH bed narrowPeak peaks ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF194FBM, ENCFF765ZZI 6159023 ENCODE Processing Pipeline 7eeebef2e06bfbbdf351b0d567088613 https://www.encodeproject.org/files/ENCFF809RZH/@@download/ENCFF809RZH.bed.gz GRCh38 released antibody characterized with exemption ENCFF644GIR bigBed narrowPeak peaks ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF809RZH 11999198 ENCODE Processing Pipeline 1341805ad9cc120c9bd4f68896496426 https://www.encodeproject.org/files/ENCFF644GIR/@@download/ENCFF644GIR.bigBed GRCh38 released antibody characterized with exemption ENCFF397KNS bigWig signal p-value ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF401GWQ, ENCFF698NVU 1353708854 ENCODE Processing Pipeline a87a79d21edb96ba24a231ee257fc94a https://www.encodeproject.org/files/ENCFF397KNS/@@download/ENCFF397KNS.bigWig hg19 released antibody characterized with exemption ENCFF868DFG bed narrowPeak peaks ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF401GWQ, ENCFF698NVU 6107575 ENCODE Processing Pipeline e9fda8f51dade07b143e938bdc7092b6 https://www.encodeproject.org/files/ENCFF868DFG/@@download/ENCFF868DFG.bed.gz hg19 released antibody characterized with exemption ENCFF475AUK bigBed narrowPeak peaks ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF868DFG 11938718 ENCODE Processing Pipeline 2e848e63ac5b16ee71a98e1f73b227c4 https://www.encodeproject.org/files/ENCFF475AUK/@@download/ENCFF475AUK.bigBed hg19 released antibody characterized with exemption ENCFF560XSC bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF001TDO, ENCFF868DFG 518557 ENCODE Processing Pipeline a12494447d35a24ac6962408dcf368aa https://www.encodeproject.org/files/ENCFF560XSC/@@download/ENCFF560XSC.bed.gz hg19 released antibody characterized with exemption ENCFF460SOG bigWig fold change over control ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF401GWQ, ENCFF698NVU 1189207514 ENCODE Processing Pipeline 925c6f2d9471d6cc3408f823a97cffd1 https://www.encodeproject.org/files/ENCFF460SOG/@@download/ENCFF460SOG.bigWig hg19 released antibody characterized with exemption ENCFF396XYX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR714JRB ChIP-seq UBERON:0000945 stomach tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2016-11-09 ENCODE 1 ENCFF560XSC 899700 ENCODE Processing Pipeline d9ef458a1b73c20e541bb9054df0d8f6 https://www.encodeproject.org/files/ENCFF396XYX/@@download/ENCFF396XYX.bigBed hg19 released antibody characterized with exemption ENCFF234UHU fastq reads ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF775BKO 1599681713 Richard Myers, HAIB 4d58db1a738d40ea22fc5ba743164c5c https://www.encodeproject.org/files/ENCFF234UHU/@@download/ENCFF234UHU.fastq.gz HiSeq 2000 /files/ENCFF155YWF/ released antibody characterized with exemption experiment not submitted to GEO ENCFF775BKO fastq reads ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF234UHU 1630489208 Richard Myers, HAIB f7ad4921ecf507727efe65d5f0098d4a https://www.encodeproject.org/files/ENCFF775BKO/@@download/ENCFF775BKO.fastq.gz HiSeq 2000 /files/ENCFF227FJX/ released antibody characterized with exemption experiment not submitted to GEO ENCFF982QPR bam unfiltered alignments ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF234UHU, ENCFF775BKO, ENCFF807MUK 3654834510 ENCODE Processing Pipeline 185d35cf7662c96908ace2cd6d659252 https://www.encodeproject.org/files/ENCFF982QPR/@@download/ENCFF982QPR.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF137FXR bam unfiltered alignments ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF234UHU, ENCFF643CGH, ENCFF775BKO 3662113023 ENCODE Processing Pipeline 8f647e5310a3a392ab6a6207ca66b721 https://www.encodeproject.org/files/ENCFF137FXR/@@download/ENCFF137FXR.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF519CKE bam alignments ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF234UHU, ENCFF643CGH, ENCFF775BKO 2505125822 ENCODE Processing Pipeline 5588efbf3d55b258634d98eb3c0b4898 https://www.encodeproject.org/files/ENCFF519CKE/@@download/ENCFF519CKE.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF075WIK bam alignments ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF234UHU, ENCFF775BKO, ENCFF807MUK 2505185642 ENCODE Processing Pipeline dacbc4989dd8856e4e2a8765bbffa424 https://www.encodeproject.org/files/ENCFF075WIK/@@download/ENCFF075WIK.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF961JZX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF438LQP 1973914 ENCODE Processing Pipeline e04505f93a1a9b3c899b6722cc5c0c42 https://www.encodeproject.org/files/ENCFF961JZX/@@download/ENCFF961JZX.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF438LQP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF003CMQ, ENCFF419RSJ 1070350 ENCODE Processing Pipeline 29e855020bd96f2f11a167be3d88d960 https://www.encodeproject.org/files/ENCFF438LQP/@@download/ENCFF438LQP.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF003CMQ bed narrowPeak peaks ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF369ZJF, ENCFF519CKE 6844858 ENCODE Processing Pipeline 81272b5a6ee1723f423048a71a13f2ec https://www.encodeproject.org/files/ENCFF003CMQ/@@download/ENCFF003CMQ.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF568CZP bigWig fold change over control ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF369ZJF, ENCFF519CKE 709179063 ENCODE Processing Pipeline daefa661e4f677732b62a4e7841cea6e https://www.encodeproject.org/files/ENCFF568CZP/@@download/ENCFF568CZP.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF689GZX bigWig signal p-value ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF369ZJF, ENCFF519CKE 859250422 ENCODE Processing Pipeline ccd2adfb4a07727354de5525c7021fe8 https://www.encodeproject.org/files/ENCFF689GZX/@@download/ENCFF689GZX.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF452IHE bigBed narrowPeak peaks ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF003CMQ 13277035 ENCODE Processing Pipeline 071ae174a43a372a78ebf7d176182907 https://www.encodeproject.org/files/ENCFF452IHE/@@download/ENCFF452IHE.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF882RNS bigBed narrowPeak peaks ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF308TCJ 13323796 ENCODE Processing Pipeline 57c794b609ff98efae386d7b7d20422a https://www.encodeproject.org/files/ENCFF882RNS/@@download/ENCFF882RNS.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF571OTQ bigWig signal p-value ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF075WIK, ENCFF218RTJ 931167708 ENCODE Processing Pipeline 4b4e9fcbc847f9c356a90ad1e402600b https://www.encodeproject.org/files/ENCFF571OTQ/@@download/ENCFF571OTQ.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF642XTK bigWig fold change over control ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF075WIK, ENCFF218RTJ 708858451 ENCODE Processing Pipeline 91e22ea0548768b5233b6670e7c75eab https://www.encodeproject.org/files/ENCFF642XTK/@@download/ENCFF642XTK.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF308TCJ bed narrowPeak peaks ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF075WIK, ENCFF218RTJ 6890739 ENCODE Processing Pipeline 55baeeb2b2d6dc0454d14a11ec243f6b https://www.encodeproject.org/files/ENCFF308TCJ/@@download/ENCFF308TCJ.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF813WZT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF717PMK 1995250 ENCODE Processing Pipeline 51c2f1f7cf9ee5c8609466ce9c5722ae https://www.encodeproject.org/files/ENCFF813WZT/@@download/ENCFF813WZT.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF717PMK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR916JAC ChIP-seq UBERON:0004550 gastroesophageal sphincter tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF308TCJ 1084233 ENCODE Processing Pipeline c2d29faa050048ec9a3137568efe31a4 https://www.encodeproject.org/files/ENCFF717PMK/@@download/ENCFF717PMK.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF658DDY fastq reads ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1267697832 Richard Myers, HAIB a6e4fc9ca18eebbfc392a708b69c380d SRA:SRR5339187 https://www.encodeproject.org/files/ENCFF658DDY/@@download/ENCFF658DDY.fastq.gz HiSeq 2000 /files/ENCFF876NBT/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF162GLI fastq reads ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1375458539 Richard Myers, HAIB 75cd7c14984124d1c4e95dc286414569 SRA:SRR5339188 https://www.encodeproject.org/files/ENCFF162GLI/@@download/ENCFF162GLI.fastq.gz HiSeq 2000 /files/ENCFF737ELZ/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF262QTI bam alignments ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF162GLI, ENCFF807MUK 1101901833 ENCODE Processing Pipeline 4aa5e53470067523250ffdeb35bd6318 https://www.encodeproject.org/files/ENCFF262QTI/@@download/ENCFF262QTI.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF396PIB bam alignments ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF658DDY, ENCFF807MUK 937152709 ENCODE Processing Pipeline 83e2f8d1849bff512a2af490aa1b7468 https://www.encodeproject.org/files/ENCFF396PIB/@@download/ENCFF396PIB.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF140SDM bigWig signal p-value ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF396PIB, ENCFF969DYI, ENCFF994YBV 818558768 ENCODE Processing Pipeline a566263e8a9881da7aa8879d9491c1ee https://www.encodeproject.org/files/ENCFF140SDM/@@download/ENCFF140SDM.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF452NOL bigWig signal p-value ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF262QTI, ENCFF969DYI, ENCFF994YBV 912120555 ENCODE Processing Pipeline eff7b6cccc9ac8d5bb44efb4a0889063 https://www.encodeproject.org/files/ENCFF452NOL/@@download/ENCFF452NOL.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF135UGH bigWig signal p-value ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF262QTI, ENCFF396PIB, ENCFF969DYI, ENCFF994YBV 952388845 ENCODE Processing Pipeline c512f821f347b30376698ac74a418cf3 https://www.encodeproject.org/files/ENCFF135UGH/@@download/ENCFF135UGH.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF937TIJ bigWig fold change over control ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF262QTI, ENCFF969DYI, ENCFF994YBV 783606676 ENCODE Processing Pipeline e1d1795ca9a6144ac6cce1eeae08b6fc https://www.encodeproject.org/files/ENCFF937TIJ/@@download/ENCFF937TIJ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF126ZPO bigWig fold change over control ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF396PIB, ENCFF969DYI, ENCFF994YBV 586584794 ENCODE Processing Pipeline 5312ad7f4f07fd8fa274db1ae876d36e https://www.encodeproject.org/files/ENCFF126ZPO/@@download/ENCFF126ZPO.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF574GHX bigWig fold change over control ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF262QTI, ENCFF396PIB, ENCFF969DYI, ENCFF994YBV 1043838235 ENCODE Processing Pipeline bd4a82334508c889442c25818854cfbd https://www.encodeproject.org/files/ENCFF574GHX/@@download/ENCFF574GHX.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF199LZX bed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF262QTI, ENCFF396PIB, ENCFF969DYI, ENCFF994YBV 6736859 ENCODE Processing Pipeline 0c17ccb8df844061baa4623755040e52 https://www.encodeproject.org/files/ENCFF199LZX/@@download/ENCFF199LZX.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF903URX bigBed narrowPeak optimal idr thresholded peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF076NCP 789314 ENCODE Processing Pipeline 85a19607570b96c15f049465c5cd8053 https://www.encodeproject.org/files/ENCFF903URX/@@download/ENCFF903URX.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF291ZSM bed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF396PIB, ENCFF969DYI, ENCFF994YBV 6122907 ENCODE Processing Pipeline 4b3f68225b59ddacfb95ce76fb8e4636 https://www.encodeproject.org/files/ENCFF291ZSM/@@download/ENCFF291ZSM.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF705ZZH bed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF262QTI, ENCFF969DYI, ENCFF994YBV 6223511 ENCODE Processing Pipeline fc123f5bffe8fbbc2c9c80ad0bb2496f https://www.encodeproject.org/files/ENCFF705ZZH/@@download/ENCFF705ZZH.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF568JZL bigBed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF291ZSM 13221629 ENCODE Processing Pipeline 6eb6a2bf16e3b3d73ee2cc5a782d0958 https://www.encodeproject.org/files/ENCFF568JZL/@@download/ENCFF568JZL.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF980KNF bigBed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF199LZX 13419851 ENCODE Processing Pipeline 4d89657090144e2090b8e53cd4d767fd https://www.encodeproject.org/files/ENCFF980KNF/@@download/ENCFF980KNF.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF816PYF bed narrowPeak conservative idr thresholded peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF199LZX, ENCFF291ZSM, ENCFF705ZZH 321208 ENCODE Processing Pipeline 16d62f6dabefd61fbdba64822e95f093 https://www.encodeproject.org/files/ENCFF816PYF/@@download/ENCFF816PYF.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF980ROA bigBed narrowPeak conservative idr thresholded peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF816PYF 712062 ENCODE Processing Pipeline 2cd402c8ebc24b62b07d200f663e0b24 https://www.encodeproject.org/files/ENCFF980ROA/@@download/ENCFF980ROA.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF076NCP bed narrowPeak optimal idr thresholded peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF199LZX, ENCFF291ZSM, ENCFF705ZZH 369919 ENCODE Processing Pipeline 8261a6ff14619464c051031f34bd7e49 https://www.encodeproject.org/files/ENCFF076NCP/@@download/ENCFF076NCP.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF547KNT bigBed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF705ZZH 13451145 ENCODE Processing Pipeline 341bf0cd5feb3fa806ba5d0a39627f2f https://www.encodeproject.org/files/ENCFF547KNT/@@download/ENCFF547KNT.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF889NFY bam unfiltered alignments ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 50 ENCFF162GLI, ENCFF643CGH 1513039546 ENCODE Processing Pipeline aa98dbc02b4afee0956effc150429c86 https://www.encodeproject.org/files/ENCFF889NFY/@@download/ENCFF889NFY.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF914XSR bam alignments ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 50 ENCFF162GLI, ENCFF643CGH 1101700934 ENCODE Processing Pipeline 0c53905205ecf3be47bc41f40f0c8c4d https://www.encodeproject.org/files/ENCFF914XSR/@@download/ENCFF914XSR.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF549NZM bam unfiltered alignments ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF658DDY 1352856829 ENCODE Processing Pipeline f383a348cb1158a85644ea5383400d7d https://www.encodeproject.org/files/ENCFF549NZM/@@download/ENCFF549NZM.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF970XFN bam alignments ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF658DDY 936723023 ENCODE Processing Pipeline 7da6c0a793cee1ab387f89d1e0fa491e https://www.encodeproject.org/files/ENCFF970XFN/@@download/ENCFF970XFN.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF347FWQ bigWig signal p-value ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF372RRO, ENCFF894EOG, ENCFF970XFN 924666690 ENCODE Processing Pipeline 44000f529bb1a7d299022daeefeb32b0 https://www.encodeproject.org/files/ENCFF347FWQ/@@download/ENCFF347FWQ.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF051GYW bigWig signal p-value ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF372RRO, ENCFF894EOG, ENCFF914XSR 981124544 ENCODE Processing Pipeline c10dc98131d10c1e965708d834f13f81 https://www.encodeproject.org/files/ENCFF051GYW/@@download/ENCFF051GYW.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF880ODS bigWig signal p-value ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF372RRO, ENCFF894EOG, ENCFF914XSR, ENCFF970XFN 1044762069 ENCODE Processing Pipeline bb717b5afdae659c8096c308b575783a https://www.encodeproject.org/files/ENCFF880ODS/@@download/ENCFF880ODS.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF171DAD bigWig fold change over control ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF372RRO, ENCFF894EOG, ENCFF970XFN 584888854 ENCODE Processing Pipeline 9f6c65a26db8d979644938f4d6860228 https://www.encodeproject.org/files/ENCFF171DAD/@@download/ENCFF171DAD.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF040IVU bigWig fold change over control ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF372RRO, ENCFF894EOG, ENCFF914XSR 784574949 ENCODE Processing Pipeline 12f022468e63f61720d98932aef61ba9 https://www.encodeproject.org/files/ENCFF040IVU/@@download/ENCFF040IVU.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF744PPC bigWig fold change over control ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF372RRO, ENCFF894EOG, ENCFF914XSR, ENCFF970XFN 1041641505 ENCODE Processing Pipeline af283e50df1907a4bbc9ec0c0b07a9ab https://www.encodeproject.org/files/ENCFF744PPC/@@download/ENCFF744PPC.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF126MEE bed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF372RRO, ENCFF894EOG, ENCFF914XSR 6200531 ENCODE Processing Pipeline c7f6cfc45fa2c6121ed252706ffd7b05 https://www.encodeproject.org/files/ENCFF126MEE/@@download/ENCFF126MEE.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF988PXY bed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF372RRO, ENCFF894EOG, ENCFF970XFN 5956915 ENCODE Processing Pipeline bfaf01393b8414943946644b9a03ec83 https://www.encodeproject.org/files/ENCFF988PXY/@@download/ENCFF988PXY.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF151PGJ bed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF372RRO, ENCFF894EOG, ENCFF914XSR, ENCFF970XFN 6585496 ENCODE Processing Pipeline 09b769d22e0937039de4abc6f4702f04 https://www.encodeproject.org/files/ENCFF151PGJ/@@download/ENCFF151PGJ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF641PYI bigBed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1 ENCFF988PXY 13200466 ENCODE Processing Pipeline 205a4005bbb83a941de7d8c8ec2410fd https://www.encodeproject.org/files/ENCFF641PYI/@@download/ENCFF641PYI.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF012HGG bigBed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 2 ENCFF126MEE 13459643 ENCODE Processing Pipeline f8cc6cb92c25026daa18aa18a40df3e4 https://www.encodeproject.org/files/ENCFF012HGG/@@download/ENCFF012HGG.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF380IQS bed narrowPeak conservative idr thresholded peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF126MEE, ENCFF151PGJ, ENCFF419RSJ, ENCFF988PXY 319076 ENCODE Processing Pipeline 2a7e55e5e6dda2cb0988f8d368313366 https://www.encodeproject.org/files/ENCFF380IQS/@@download/ENCFF380IQS.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF373KMF bigBed narrowPeak conservative idr thresholded peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF380IQS 708781 ENCODE Processing Pipeline bc2de1315422e510470577f26c31402a https://www.encodeproject.org/files/ENCFF373KMF/@@download/ENCFF373KMF.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF443EBO bigBed narrowPeak peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF151PGJ 13406671 ENCODE Processing Pipeline 979c900ce299a80108a5ac6676f38205 https://www.encodeproject.org/files/ENCFF443EBO/@@download/ENCFF443EBO.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF710CRT bed narrowPeak optimal idr thresholded peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF126MEE, ENCFF151PGJ, ENCFF419RSJ, ENCFF988PXY 364208 ENCODE Processing Pipeline 4a19df60a477c71ed93a0f834ba1db20 https://www.encodeproject.org/files/ENCFF710CRT/@@download/ENCFF710CRT.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF833NQF bigBed narrowPeak optimal idr thresholded peaks ENCSR714YZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ETV4-human ENCAB174PPL DNA False 2016-06-13 ENCODE 1, 2 ENCFF710CRT 783253 ENCODE Processing Pipeline 1fdb3c8848eecc8d50871553d1ca25ca https://www.encodeproject.org/files/ENCFF833NQF/@@download/ENCFF833NQF.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF943IGO fastq reads ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF283GGY 1600582243 Richard Myers, HAIB fa5d7054e7a0ab2dc8a39a6da17632b4 SRA:SRR6213392 https://www.encodeproject.org/files/ENCFF943IGO/@@download/ENCFF943IGO.fastq.gz HiSeq 2000 /files/ENCFF015QBJ/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF283GGY fastq reads ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF943IGO 1685011665 Richard Myers, HAIB 6997343c361b29442c0efbd0daf292b0 SRA:SRR6213392 https://www.encodeproject.org/files/ENCFF283GGY/@@download/ENCFF283GGY.fastq.gz HiSeq 2000 /files/ENCFF062WKC/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF545ZJY bam unfiltered alignments ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF283GGY, ENCFF643CGH, ENCFF943IGO 3981507513 ENCODE Processing Pipeline a85f9a85ab449c1d585e92e3359d914d https://www.encodeproject.org/files/ENCFF545ZJY/@@download/ENCFF545ZJY.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF575GUT bam unfiltered alignments ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF283GGY, ENCFF807MUK, ENCFF943IGO 3973270093 ENCODE Processing Pipeline c6e7e3522693039f96c5ba7ac3a42351 https://www.encodeproject.org/files/ENCFF575GUT/@@download/ENCFF575GUT.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF181CGW bam alignments ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF283GGY, ENCFF643CGH, ENCFF943IGO 2653087494 ENCODE Processing Pipeline 2c547df8008032db2934855f38a7e677 https://www.encodeproject.org/files/ENCFF181CGW/@@download/ENCFF181CGW.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF257LFE bam alignments ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF283GGY, ENCFF807MUK, ENCFF943IGO 2651755399 ENCODE Processing Pipeline f4a140f62e0acd9c75548bf48f26be63 https://www.encodeproject.org/files/ENCFF257LFE/@@download/ENCFF257LFE.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF441IFJ bigWig signal p-value ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF181CGW 1098748234 ENCODE Processing Pipeline ab776dda366e7c175149c13b33d5aedb https://www.encodeproject.org/files/ENCFF441IFJ/@@download/ENCFF441IFJ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF757KZD bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF777YLJ 2741 ENCODE Processing Pipeline 09e4b30a37143d8fd262e59af04c3aa5 https://www.encodeproject.org/files/ENCFF757KZD/@@download/ENCFF757KZD.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF381CZQ bigWig fold change over control ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF181CGW 879207023 ENCODE Processing Pipeline fb1586c171f70b2ec631367fbb665d11 https://www.encodeproject.org/files/ENCFF381CZQ/@@download/ENCFF381CZQ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF777YLJ bed narrowPeak peaks ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF181CGW 6792434 ENCODE Processing Pipeline b2cd0adc9b69d217e6d47eeb881e2dae https://www.encodeproject.org/files/ENCFF777YLJ/@@download/ENCFF777YLJ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF756SCW bigBed narrowPeak peaks ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF777YLJ 10842533 ENCODE Processing Pipeline 46a3138c0c89a7be43d29f3fa3bcf803 https://www.encodeproject.org/files/ENCFF756SCW/@@download/ENCFF756SCW.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF068SUB bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF757KZD 62859 ENCODE Processing Pipeline 45b28b09755576ca52f95eb31a2c316d https://www.encodeproject.org/files/ENCFF068SUB/@@download/ENCFF068SUB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF826OPR bigWig signal p-value ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF257LFE 946372227 ENCODE Processing Pipeline 625a2aff6e3498236bddb8fb611afd4a https://www.encodeproject.org/files/ENCFF826OPR/@@download/ENCFF826OPR.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF364KDX bigWig fold change over control ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF257LFE 868796199 ENCODE Processing Pipeline 0d74bd1ec389e76e945d863ce707c261 https://www.encodeproject.org/files/ENCFF364KDX/@@download/ENCFF364KDX.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF874MIZ bed narrowPeak peaks ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF257LFE 6608434 ENCODE Processing Pipeline bd356fdc391777a77a1c5fe4fb3c377a https://www.encodeproject.org/files/ENCFF874MIZ/@@download/ENCFF874MIZ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF359IIT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF079ZWQ 58150 ENCODE Processing Pipeline 0d46bf402469a6083aab2536f63f169a https://www.encodeproject.org/files/ENCFF359IIT/@@download/ENCFF359IIT.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF079ZWQ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF874MIZ 4301 ENCODE Processing Pipeline d0f6bc35721329835a17624eacc9a845 https://www.encodeproject.org/files/ENCFF079ZWQ/@@download/ENCFF079ZWQ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF089JPG bigBed narrowPeak peaks ENCSR346DKN ChIP-seq UBERON:0008367 breast epithelium tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF874MIZ 10629625 ENCODE Processing Pipeline 73338ee81116212d2bf4a3880f603b24 https://www.encodeproject.org/files/ENCFF089JPG/@@download/ENCFF089JPG.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF117VHU fastq reads ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF450ZWT 3202545122 Richard Myers, HAIB 015a4efc4db10b0bbd26a841f30a1732 SRA:SRR6212605 https://www.encodeproject.org/files/ENCFF117VHU/@@download/ENCFF117VHU.fastq.gz HiSeq 2000 /files/ENCFF869CER/ released antibody characterized with exemption ENCFF450ZWT fastq reads ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF117VHU 3126449765 Richard Myers, HAIB b2065b40aedea8c3dd5447a99e04a781 SRA:SRR6212605 https://www.encodeproject.org/files/ENCFF450ZWT/@@download/ENCFF450ZWT.fastq.gz HiSeq 2000 /files/ENCFF354FAR/ released antibody characterized with exemption ENCFF455FPI bam unfiltered alignments ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF117VHU, ENCFF450ZWT, ENCFF807MUK 7209921902 ENCODE Processing Pipeline 1fa06b0c6cf6ecd6910c7c0d9652c29b https://www.encodeproject.org/files/ENCFF455FPI/@@download/ENCFF455FPI.bam hg19 released antibody characterized with exemption ENCFF944EAM bam alignments ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF117VHU, ENCFF450ZWT, ENCFF807MUK 5123136393 ENCODE Processing Pipeline ec3a928ba0d789571bbefe08d113c1ae https://www.encodeproject.org/files/ENCFF944EAM/@@download/ENCFF944EAM.bam hg19 released antibody characterized with exemption ENCFF774SQL bam unfiltered alignments ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF117VHU, ENCFF450ZWT, ENCFF643CGH 7236813543 ENCODE Processing Pipeline fba19491e6e1557fb9d88a4ef3cea6fb https://www.encodeproject.org/files/ENCFF774SQL/@@download/ENCFF774SQL.bam GRCh38 released antibody characterized with exemption ENCFF527JNQ bam alignments ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF117VHU, ENCFF450ZWT, ENCFF643CGH 5127145120 ENCODE Processing Pipeline 8d097cf69c6bb61ec4b9feb38b760dac https://www.encodeproject.org/files/ENCFF527JNQ/@@download/ENCFF527JNQ.bam GRCh38 released antibody characterized with exemption ENCFF954BJF bigWig signal p-value ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF527JNQ 1040704298 ENCODE Processing Pipeline 853cbb55bdba586fcb151ac92fbaa9ef https://www.encodeproject.org/files/ENCFF954BJF/@@download/ENCFF954BJF.bigWig GRCh38 released antibody characterized with exemption ENCFF270XQD bigBed narrowPeak peaks ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF322MFZ 11673649 ENCODE Processing Pipeline 41857834fabc60ceb40e824e9f3bef0e https://www.encodeproject.org/files/ENCFF270XQD/@@download/ENCFF270XQD.bigBed GRCh38 released antibody characterized with exemption ENCFF732IFW bigWig fold change over control ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF527JNQ 1428652477 ENCODE Processing Pipeline 042181687313cfb3c2d73a5a5b20fd1a https://www.encodeproject.org/files/ENCFF732IFW/@@download/ENCFF732IFW.bigWig GRCh38 released antibody characterized with exemption ENCFF833NHM bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF322MFZ, ENCFF419RSJ 521945 ENCODE Processing Pipeline c50b4ab588444d6637ad1abf78a61cda https://www.encodeproject.org/files/ENCFF833NHM/@@download/ENCFF833NHM.bed.gz GRCh38 released antibody characterized with exemption ENCFF322MFZ bed narrowPeak peaks ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF527JNQ 6340074 ENCODE Processing Pipeline 47d210664219a958449c6eb7ad8968cd https://www.encodeproject.org/files/ENCFF322MFZ/@@download/ENCFF322MFZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF875AYT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF833NHM 1049877 ENCODE Processing Pipeline b74a878dc42b37939b8a5fae4a44d854 https://www.encodeproject.org/files/ENCFF875AYT/@@download/ENCFF875AYT.bigBed GRCh38 released antibody characterized with exemption ENCFF654LHA bigWig signal p-value ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF944EAM 1042873173 ENCODE Processing Pipeline c1352e7ca4f57b4867084cf0e3ccad8d https://www.encodeproject.org/files/ENCFF654LHA/@@download/ENCFF654LHA.bigWig hg19 released antibody characterized with exemption ENCFF961TYR bigBed narrowPeak peaks ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF839MBM 11662114 ENCODE Processing Pipeline 306ba5a026bef040c56aaee9bb7f504d https://www.encodeproject.org/files/ENCFF961TYR/@@download/ENCFF961TYR.bigBed hg19 released antibody characterized with exemption ENCFF145NMU bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF839MBM 525798 ENCODE Processing Pipeline 845e81d2a936657d8b097db601b16978 https://www.encodeproject.org/files/ENCFF145NMU/@@download/ENCFF145NMU.bed.gz hg19 released antibody characterized with exemption ENCFF447ICW bigWig fold change over control ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF944EAM 1427662056 ENCODE Processing Pipeline 8f1c224316b5c7ec81efb59de9dab95c https://www.encodeproject.org/files/ENCFF447ICW/@@download/ENCFF447ICW.bigWig hg19 released antibody characterized with exemption ENCFF839MBM bed narrowPeak peaks ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF944EAM 6340677 ENCODE Processing Pipeline 7d50f66aa8886055b0e47d6c02d2352c https://www.encodeproject.org/files/ENCFF839MBM/@@download/ENCFF839MBM.bed.gz hg19 released antibody characterized with exemption ENCFF765JAG bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000MMZ ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF145NMU 1051832 ENCODE Processing Pipeline e9fe0fb514118eb6e9de6789a84a39df https://www.encodeproject.org/files/ENCFF765JAG/@@download/ENCFF765JAG.bigBed hg19 released antibody characterized with exemption ENCFF716BNN fastq reads ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF892KYV 1950682864 Richard Myers, HAIB 199d5c2caaa389de0136ce3cb2ef5d7f SRA:SRR6213886 https://www.encodeproject.org/files/ENCFF716BNN/@@download/ENCFF716BNN.fastq.gz HiSeq 2000 /files/ENCFF766JFK/ released antibody characterized with exemption ENCFF892KYV fastq reads ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF716BNN 2036557538 Richard Myers, HAIB d1a4fe0548b3377bab419e3c5c2b5bc6 SRA:SRR6213886 https://www.encodeproject.org/files/ENCFF892KYV/@@download/ENCFF892KYV.fastq.gz HiSeq 2000 /files/ENCFF826BIL/ released antibody characterized with exemption ENCFF475UFK bam unfiltered alignments ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF716BNN, ENCFF807MUK, ENCFF892KYV 4499251081 ENCODE Processing Pipeline 149defe8fb6293e59e4451b943d63789 https://www.encodeproject.org/files/ENCFF475UFK/@@download/ENCFF475UFK.bam hg19 released antibody characterized with exemption ENCFF478WHQ bam unfiltered alignments ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF716BNN, ENCFF892KYV 4508282768 ENCODE Processing Pipeline b2370a3913bab266135d755c9887fe0d https://www.encodeproject.org/files/ENCFF478WHQ/@@download/ENCFF478WHQ.bam GRCh38 released antibody characterized with exemption ENCFF122EVJ bam alignments ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF716BNN, ENCFF807MUK, ENCFF892KYV 3382490138 ENCODE Processing Pipeline 195facb12cad8d62d358c7dd38a1a954 https://www.encodeproject.org/files/ENCFF122EVJ/@@download/ENCFF122EVJ.bam hg19 released antibody characterized with exemption ENCFF591PEY bam alignments ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF716BNN, ENCFF892KYV 3380982404 ENCODE Processing Pipeline e54f99b7f0181a8beb711fdce652d96d https://www.encodeproject.org/files/ENCFF591PEY/@@download/ENCFF591PEY.bam GRCh38 released antibody characterized with exemption ENCFF043JOO bigWig signal p-value ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF122EVJ 1441856888 ENCODE Processing Pipeline ae9178eee2d707ac0d67f9d353f16f00 https://www.encodeproject.org/files/ENCFF043JOO/@@download/ENCFF043JOO.bigWig hg19 released antibody characterized with exemption ENCFF034ZXB bigWig fold change over control ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF122EVJ 1082403217 ENCODE Processing Pipeline 278ce3d644c29d3808cc9a71429ce153 https://www.encodeproject.org/files/ENCFF034ZXB/@@download/ENCFF034ZXB.bigWig hg19 released antibody characterized with exemption ENCFF495YBQ bed narrowPeak peaks ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF122EVJ 7049771 ENCODE Processing Pipeline 78e7fe8188e0d8b580593a3f90966bac https://www.encodeproject.org/files/ENCFF495YBQ/@@download/ENCFF495YBQ.bed.gz hg19 released antibody characterized with exemption ENCFF981JOH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF495YBQ 1307797 ENCODE Processing Pipeline c8aba6a7f303d12ac3c0138d74fd713f https://www.encodeproject.org/files/ENCFF981JOH/@@download/ENCFF981JOH.bed.gz hg19 released antibody characterized with exemption ENCFF144YVH bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF981JOH 2806480 ENCODE Processing Pipeline 142d3c1ee7fe3c62d35d44580cca5f5e https://www.encodeproject.org/files/ENCFF144YVH/@@download/ENCFF144YVH.bigBed hg19 released antibody characterized with exemption ENCFF754LRY bigBed narrowPeak peaks ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF495YBQ 13055052 ENCODE Processing Pipeline 5139999b3d4b5f9784b35bdb4d900e25 https://www.encodeproject.org/files/ENCFF754LRY/@@download/ENCFF754LRY.bigBed hg19 released antibody characterized with exemption ENCFF469CEQ bigWig fold change over control ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF591PEY 1071199754 ENCODE Processing Pipeline f4fa76e018afcc418823ec88a41164ab https://www.encodeproject.org/files/ENCFF469CEQ/@@download/ENCFF469CEQ.bigWig GRCh38 released antibody characterized with exemption ENCFF875AJZ bigWig signal p-value ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF591PEY 1182899803 ENCODE Processing Pipeline 3d08920568d0e702375deb5f4ab081a4 https://www.encodeproject.org/files/ENCFF875AJZ/@@download/ENCFF875AJZ.bigWig GRCh38 released antibody characterized with exemption ENCFF049JNK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF835VBA 1326532 ENCODE Processing Pipeline 09ca0ca6ab7f0d67a6858b4a55a5ec54 https://www.encodeproject.org/files/ENCFF049JNK/@@download/ENCFF049JNK.bed.gz GRCh38 released antibody characterized with exemption ENCFF038JBQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF049JNK 2834877 ENCODE Processing Pipeline 18dd033f9c2424ae27dff9addfd5af58 https://www.encodeproject.org/files/ENCFF038JBQ/@@download/ENCFF038JBQ.bigBed GRCh38 released antibody characterized with exemption ENCFF835VBA bed narrowPeak peaks ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF591PEY 7096026 ENCODE Processing Pipeline 508134f853429ef3b9d59800ad8e420e https://www.encodeproject.org/files/ENCFF835VBA/@@download/ENCFF835VBA.bed.gz GRCh38 released antibody characterized with exemption ENCFF186FFW bigBed narrowPeak peaks ENCSR580XUK ChIP-seq UBERON:0001323 tibial nerve tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF835VBA 13112600 ENCODE Processing Pipeline 5b7e656255a08090ab0534f7638308c8 https://www.encodeproject.org/files/ENCFF186FFW/@@download/ENCFF186FFW.bigBed GRCh38 released antibody characterized with exemption ENCFF131MJT fastq reads ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 1 50 single-ended 2458979500 Richard Myers, HAIB 0b050d0c479329eda18ab63b73b723c8 SRA:SRR5339428 https://www.encodeproject.org/files/ENCFF131MJT/@@download/ENCFF131MJT.fastq.gz HiSeq 2000 /files/ENCFF963TEZ/ released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF291CUA fastq reads ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 1 50 single-ended 890094923 Richard Myers, HAIB 6ea2b47512fe74dd2924f3e77c144564 SRA:SRR5339429 https://www.encodeproject.org/files/ENCFF291CUA/@@download/ENCFF291CUA.fastq.gz HiSeq 2000 /files/ENCFF564XPO/ released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF028MMF bam alignments ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 50 ENCFF291CUA, ENCFF643CGH 771027834 ENCODE Processing Pipeline 0bbebbfd6dd72afabe71b4e618187aad https://www.encodeproject.org/files/ENCFF028MMF/@@download/ENCFF028MMF.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF103FSR bam unfiltered alignments ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 50 ENCFF291CUA, ENCFF807MUK 985529197 ENCODE Processing Pipeline cda9564ad36ea8aa83f193485fff8d7e https://www.encodeproject.org/files/ENCFF103FSR/@@download/ENCFF103FSR.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF491KWW bam unfiltered alignments ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 50 ENCFF131MJT, ENCFF643CGH 2576717786 ENCODE Processing Pipeline e81ca68f69f9b1fc8f726045e08555cb https://www.encodeproject.org/files/ENCFF491KWW/@@download/ENCFF491KWW.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF953GGK bam unfiltered alignments ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 50 ENCFF291CUA, ENCFF643CGH 987480254 ENCODE Processing Pipeline 58a740525fc53b9476ddff11c3f53a7f https://www.encodeproject.org/files/ENCFF953GGK/@@download/ENCFF953GGK.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF432VHJ bam unfiltered alignments ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 50 ENCFF131MJT, ENCFF807MUK 2571549508 ENCODE Processing Pipeline fb06720ad9ab796b66ebbec0a8b81124 https://www.encodeproject.org/files/ENCFF432VHJ/@@download/ENCFF432VHJ.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF506GHT bam alignments ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 50 ENCFF291CUA, ENCFF807MUK 771021370 ENCODE Processing Pipeline fb2dc92d7405155a7a8dd9bc7878e2ed https://www.encodeproject.org/files/ENCFF506GHT/@@download/ENCFF506GHT.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF198OIE bam alignments ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 50 ENCFF131MJT, ENCFF643CGH 1940925224 ENCODE Processing Pipeline ec0eeeaa308c4d4089d8e99fe0ceb57d https://www.encodeproject.org/files/ENCFF198OIE/@@download/ENCFF198OIE.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF242CKK bam alignments ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 50 ENCFF131MJT, ENCFF807MUK 1940787352 ENCODE Processing Pipeline 9eb844526b9b7a4b64b29e9a124374ea https://www.encodeproject.org/files/ENCFF242CKK/@@download/ENCFF242CKK.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF533SID bed narrowPeak conservative idr thresholded peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF001TDO, ENCFF151FHL, ENCFF664WRF, ENCFF764LKV 672951 ENCODE Processing Pipeline 11c71025245479a0d34ea820314815cc https://www.encodeproject.org/files/ENCFF533SID/@@download/ENCFF533SID.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF151FHL bed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF242CKK, ENCFF506GHT, ENCFF829HKP, ENCFF876ZSM 7025694 ENCODE Processing Pipeline 0293b98eb8f7c1e8ce1e95ea21e21043 https://www.encodeproject.org/files/ENCFF151FHL/@@download/ENCFF151FHL.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF559UKB bigBed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 ENCFF764LKV 11120530 ENCODE Processing Pipeline 08e21c167e87d8245553f03228aab57d https://www.encodeproject.org/files/ENCFF559UKB/@@download/ENCFF559UKB.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF583SRK bigWig fold change over control ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 ENCFF506GHT, ENCFF829HKP 357877284 ENCODE Processing Pipeline dd87b5e6dc394500f7d17e0b180c2136 https://www.encodeproject.org/files/ENCFF583SRK/@@download/ENCFF583SRK.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF854UZZ bigWig fold change over control ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF242CKK, ENCFF506GHT, ENCFF829HKP, ENCFF876ZSM 1183149414 ENCODE Processing Pipeline c63166b3963c55e36e7e30f415e0fe44 https://www.encodeproject.org/files/ENCFF854UZZ/@@download/ENCFF854UZZ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF664WRF bed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 ENCFF242CKK, ENCFF829HKP, ENCFF876ZSM 6681557 ENCODE Processing Pipeline b6d6cc854cc2453c88911a79acc86452 https://www.encodeproject.org/files/ENCFF664WRF/@@download/ENCFF664WRF.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF206KBF bigBed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 ENCFF664WRF 13294504 ENCODE Processing Pipeline ce50072af237d9d0c4c5ec0deb162828 https://www.encodeproject.org/files/ENCFF206KBF/@@download/ENCFF206KBF.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF609YIG bigBed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF151FHL 13491352 ENCODE Processing Pipeline d55f01fc21897a63c88bd0660d196a80 https://www.encodeproject.org/files/ENCFF609YIG/@@download/ENCFF609YIG.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF628OTI bigWig signal p-value ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 ENCFF506GHT, ENCFF829HKP 509380674 ENCODE Processing Pipeline 1adb1f12023589c4049c227d94b2b140 https://www.encodeproject.org/files/ENCFF628OTI/@@download/ENCFF628OTI.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF902QFZ bigWig signal p-value ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF242CKK, ENCFF506GHT, ENCFF829HKP, ENCFF876ZSM 929195950 ENCODE Processing Pipeline af31232464bb3b4d54d1680c49220272 https://www.encodeproject.org/files/ENCFF902QFZ/@@download/ENCFF902QFZ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF688OMX bigWig fold change over control ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 ENCFF242CKK, ENCFF829HKP, ENCFF876ZSM 944763294 ENCODE Processing Pipeline af6bb8b9d1a10c8758392ad4413ac0b0 https://www.encodeproject.org/files/ENCFF688OMX/@@download/ENCFF688OMX.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF764LKV bed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 ENCFF506GHT, ENCFF829HKP 5339710 ENCODE Processing Pipeline 2f06292ed2403141ca58fc1cea1a60e5 https://www.encodeproject.org/files/ENCFF764LKV/@@download/ENCFF764LKV.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF897LDZ bigBed narrowPeak conservative idr thresholded peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF533SID 1137629 ENCODE Processing Pipeline 6f2fbfb9d1b090525bfcb44ab9b794a7 https://www.encodeproject.org/files/ENCFF897LDZ/@@download/ENCFF897LDZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF318BMP bigBed narrowPeak optimal idr thresholded peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF501XJA 1442495 ENCODE Processing Pipeline 011ee2a83231c2fd04c0a70e6c6e8483 https://www.encodeproject.org/files/ENCFF318BMP/@@download/ENCFF318BMP.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF938VSN bigWig signal p-value ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 ENCFF242CKK, ENCFF829HKP, ENCFF876ZSM 947032746 ENCODE Processing Pipeline 132e568fe60621c75cb5c3e0bb78b96e https://www.encodeproject.org/files/ENCFF938VSN/@@download/ENCFF938VSN.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF501XJA bed narrowPeak optimal idr thresholded peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF001TDO, ENCFF151FHL, ENCFF664WRF, ENCFF764LKV 907481 ENCODE Processing Pipeline f4b607f284f03be176612d624cb7a16b https://www.encodeproject.org/files/ENCFF501XJA/@@download/ENCFF501XJA.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF597WXC bigWig signal p-value ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 ENCFF028MMF, ENCFF389HKQ 467344526 ENCODE Processing Pipeline 3ab4036252a82e5f485b2630072c6c35 https://www.encodeproject.org/files/ENCFF597WXC/@@download/ENCFF597WXC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF812CSA bigWig signal p-value ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 ENCFF198OIE, ENCFF389HKQ, ENCFF802YSD 946792457 ENCODE Processing Pipeline 75cb1758021008a0e56a393039684fc1 https://www.encodeproject.org/files/ENCFF812CSA/@@download/ENCFF812CSA.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF630XHQ bigWig signal p-value ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF028MMF, ENCFF198OIE, ENCFF389HKQ, ENCFF802YSD 911228323 ENCODE Processing Pipeline 667b8a63308c7df1b5d2f16b07453999 https://www.encodeproject.org/files/ENCFF630XHQ/@@download/ENCFF630XHQ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF143WTJ bigWig fold change over control ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 ENCFF198OIE, ENCFF389HKQ, ENCFF802YSD 944897985 ENCODE Processing Pipeline d5a00a5cbdee1a89e91f380894c593d3 https://www.encodeproject.org/files/ENCFF143WTJ/@@download/ENCFF143WTJ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF581ZOP bigWig fold change over control ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 ENCFF028MMF, ENCFF389HKQ 365006749 ENCODE Processing Pipeline b4af8ee9e4f1962660eb4c7fe5df45d5 https://www.encodeproject.org/files/ENCFF581ZOP/@@download/ENCFF581ZOP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF573DQZ bigWig fold change over control ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF028MMF, ENCFF198OIE, ENCFF389HKQ, ENCFF802YSD 1182658911 ENCODE Processing Pipeline 64e70923b1ba0416fdfa7357848f7d45 https://www.encodeproject.org/files/ENCFF573DQZ/@@download/ENCFF573DQZ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF567VCA bed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 ENCFF028MMF, ENCFF389HKQ 5289345 ENCODE Processing Pipeline f9b98367c7690814af53bde91c7a8cbf https://www.encodeproject.org/files/ENCFF567VCA/@@download/ENCFF567VCA.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF119CLS bed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 ENCFF198OIE, ENCFF389HKQ, ENCFF802YSD 6702105 ENCODE Processing Pipeline fc5555d68a912f48b0afc02ed8ce283d https://www.encodeproject.org/files/ENCFF119CLS/@@download/ENCFF119CLS.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF301KIQ bed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF028MMF, ENCFF198OIE, ENCFF389HKQ, ENCFF802YSD 6993984 ENCODE Processing Pipeline 0194faddf7afd359561169c4bf8684a1 https://www.encodeproject.org/files/ENCFF301KIQ/@@download/ENCFF301KIQ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF634UPK bigBed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1 ENCFF567VCA 11136659 ENCODE Processing Pipeline 4e7244012bb2a3dcff652c3c02d49952 https://www.encodeproject.org/files/ENCFF634UPK/@@download/ENCFF634UPK.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF790DED bigBed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 2 ENCFF119CLS 13434503 ENCODE Processing Pipeline cc18641dc08134c3fa8c99e5c3a43e24 https://www.encodeproject.org/files/ENCFF790DED/@@download/ENCFF790DED.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF700RVF bigBed narrowPeak peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF301KIQ 13509681 ENCODE Processing Pipeline 249ff18ae83baaa733b6f74c04318857 https://www.encodeproject.org/files/ENCFF700RVF/@@download/ENCFF700RVF.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF139ARB bigBed narrowPeak conservative idr thresholded peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF244SJK 1146158 ENCODE Processing Pipeline e7e0a8d22f1845ede625f02d4f761118 https://www.encodeproject.org/files/ENCFF139ARB/@@download/ENCFF139ARB.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF244SJK bed narrowPeak conservative idr thresholded peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF119CLS, ENCFF301KIQ, ENCFF419RSJ, ENCFF567VCA 677670 ENCODE Processing Pipeline 05c48ac3714e109167cce6d849a1d7bc https://www.encodeproject.org/files/ENCFF244SJK/@@download/ENCFF244SJK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF482JUI bed narrowPeak optimal idr thresholded peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF119CLS, ENCFF301KIQ, ENCFF419RSJ, ENCFF567VCA 922646 ENCODE Processing Pipeline 328e2c3f9628b614851e34be8e4b3b9c https://www.encodeproject.org/files/ENCFF482JUI/@@download/ENCFF482JUI.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF452DTN bigBed narrowPeak optimal idr thresholded peaks ENCSR839SFJ ChIP-seq CL:0000103 bipolar neuron in vitro differentiated cells adult male 53 year Homo sapiens doxycycline hyclate SMARCA4-human ENCAB000AEO DNA False 2016-11-02 ENCODE 1, 2 ENCFF482JUI 1464480 ENCODE Processing Pipeline 108c1b0748a21d51ab9c96012a70332b https://www.encodeproject.org/files/ENCFF452DTN/@@download/ENCFF452DTN.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF000NZP bam alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OAD 824327593 Richard Myers, HAIB 48a26cfaef9f38fd5058ddf2235c673d https://www.encodeproject.org/files/ENCFF000NZP/@@download/ENCFF000NZP.bam hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000NZR bam alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OAF 890020471 Richard Myers, HAIB 703340fad3b63649b18aaa7ee634a12b https://www.encodeproject.org/files/ENCFF000NZR/@@download/ENCFF000NZR.bam hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000NZT bigBed broadPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TYC 443294 Richard Myers, HAIB 6a487d38accf6f54f1a9162adbbc198d https://www.encodeproject.org/files/ENCFF000NZT/@@download/ENCFF000NZT.bigBed hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000NZU bigBed broadPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TYD 744558 Richard Myers, HAIB 8b718e0a80eaaa094f4da67dbb93cad0 https://www.encodeproject.org/files/ENCFF000NZU/@@download/ENCFF000NZU.bigBed hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000NZV bigWig raw signal ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 1 18401340 Richard Myers, HAIB 18a4bb4f46338181723315902643638a https://www.encodeproject.org/files/ENCFF000NZV/@@download/ENCFF000NZV.bigWig hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000NZW bigWig raw signal ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 1 23253234 Richard Myers, HAIB 019aebdbc34b09317dc76c8b823be0c8 https://www.encodeproject.org/files/ENCFF000NZW/@@download/ENCFF000NZW.bigWig hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000OAD fastq reads ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 977701731 Richard Myers, HAIB 3b033aa9f3910e33ba5b5e9cf985c7ae https://www.encodeproject.org/files/ENCFF000OAD/@@download/ENCFF000OAD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF000OAF fastq reads ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1045848220 Richard Myers, HAIB bfeb84734180538588142463cf6536c4 https://www.encodeproject.org/files/ENCFF000OAF/@@download/ENCFF000OAF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCS/ released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF001TYC bed broadPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 1 230920 Richard Myers, HAIB 40736db437a314562c2cb7278c353445 https://www.encodeproject.org/files/ENCFF001TYC/@@download/ENCFF001TYC.bed.gz hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF001TYD bed broadPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 1 407474 Richard Myers, HAIB 7af331059b42fcb8a71e94cdde2fdf1b https://www.encodeproject.org/files/ENCFF001TYD/@@download/ENCFF001TYD.bed.gz hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF002CHL bed narrowPeak optimal idr thresholded peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 256644 ENCODE Consortium Analysis Working Group 74d56b36de93116ca951da4d1b0fc189 https://www.encodeproject.org/files/ENCFF002CHL/@@download/ENCFF002CHL.bed.gz hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF182VLG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE ENCFF002CHL 705763 ENCODE Consortium e8698ddd04c50196d3212af89c67a737 https://www.encodeproject.org/files/ENCFF182VLG/@@download/ENCFF182VLG.bigBed hg19 archived moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF304FLU bam unfiltered alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OAD, ENCFF807MUK 1215889607 ENCODE Processing Pipeline 3a7da11dfa627d9d5a986b0de2e9ab9d https://www.encodeproject.org/files/ENCFF304FLU/@@download/ENCFF304FLU.bam hg19 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF975ADV bam alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OAD, ENCFF807MUK 560822826 ENCODE Processing Pipeline 4cd1cb59446830b972144f30c1b6a646 https://www.encodeproject.org/files/ENCFF975ADV/@@download/ENCFF975ADV.bam hg19 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF995SFW bam unfiltered alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OAF, ENCFF807MUK 1324854751 ENCODE Processing Pipeline 01d2a648ef5b64517b254988479db54e https://www.encodeproject.org/files/ENCFF995SFW/@@download/ENCFF995SFW.bam hg19 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF183DZU bam alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OAF, ENCFF807MUK 666963521 ENCODE Processing Pipeline 2025825749236bed4a08edd407832e2e https://www.encodeproject.org/files/ENCFF183DZU/@@download/ENCFF183DZU.bam hg19 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF558OGS bam unfiltered alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OAD, ENCFF643CGH 1219134745 ENCODE Processing Pipeline 8a00f25dc82199917c8563c6a8b79b99 https://www.encodeproject.org/files/ENCFF558OGS/@@download/ENCFF558OGS.bam GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF389MHG bam unfiltered alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OAF, ENCFF643CGH 1328410851 ENCODE Processing Pipeline f9a543998aa01a5b793702afa38c57c7 https://www.encodeproject.org/files/ENCFF389MHG/@@download/ENCFF389MHG.bam GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF791EPM bam alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OAD, ENCFF643CGH 565801917 ENCODE Processing Pipeline f51a56a7b622c6d25b4a277b6820da99 https://www.encodeproject.org/files/ENCFF791EPM/@@download/ENCFF791EPM.bam GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF845MYC bam alignments ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OAF, ENCFF643CGH 668203511 ENCODE Processing Pipeline 141168d9fac65acd3bce40b23283d1de https://www.encodeproject.org/files/ENCFF845MYC/@@download/ENCFF845MYC.bam GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF152BKY bigWig fold change over control ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF562HPN, ENCFF845MYC 349198728 ENCODE Processing Pipeline cb9e648393a8e4cc12e2d14504c6d133 https://www.encodeproject.org/files/ENCFF152BKY/@@download/ENCFF152BKY.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF889RYR bed narrowPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF100EIH, ENCFF562HPN, ENCFF791EPM 4204745 ENCODE Processing Pipeline 11d261f703f14bbe7c34db9443958ed6 https://www.encodeproject.org/files/ENCFF889RYR/@@download/ENCFF889RYR.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF671AVF bigWig signal p-value ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF100EIH, ENCFF562HPN, ENCFF791EPM 534391643 ENCODE Processing Pipeline 3b54348fda6dea7ca2e4b668ac187fc6 https://www.encodeproject.org/files/ENCFF671AVF/@@download/ENCFF671AVF.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF531XMY bigWig signal p-value ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100EIH, ENCFF562HPN, ENCFF791EPM, ENCFF845MYC 802666691 ENCODE Processing Pipeline 4e1c59501bac627df1fdc426c06d29f2 https://www.encodeproject.org/files/ENCFF531XMY/@@download/ENCFF531XMY.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF845ROK bigWig fold change over control ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF100EIH, ENCFF562HPN, ENCFF791EPM 294731890 ENCODE Processing Pipeline 60003a86c6fc812ccc28e2e2dcd5e131 https://www.encodeproject.org/files/ENCFF845ROK/@@download/ENCFF845ROK.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF349FQI bed narrowPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF562HPN, ENCFF845MYC 4769330 ENCODE Processing Pipeline 3eed8d776f318cf7287353397732b077 https://www.encodeproject.org/files/ENCFF349FQI/@@download/ENCFF349FQI.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF535BIH bigWig fold change over control ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100EIH, ENCFF562HPN, ENCFF791EPM, ENCFF845MYC 549618056 ENCODE Processing Pipeline c2a024884b27c0308b2687fc0093941c https://www.encodeproject.org/files/ENCFF535BIH/@@download/ENCFF535BIH.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF923PSA bigWig signal p-value ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF562HPN, ENCFF845MYC 539049556 ENCODE Processing Pipeline 64f71af360e740da35f08904dca2d526 https://www.encodeproject.org/files/ENCFF923PSA/@@download/ENCFF923PSA.bigWig GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF067LQX bed narrowPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100EIH, ENCFF562HPN, ENCFF791EPM, ENCFF845MYC 5159518 ENCODE Processing Pipeline 3b4f3dfff54782a1eaa15e8fbae1670d https://www.encodeproject.org/files/ENCFF067LQX/@@download/ENCFF067LQX.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF784OKU bigBed narrowPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF889RYR 10549707 ENCODE Processing Pipeline d2247550dcfd9e804b8f91590325b124 https://www.encodeproject.org/files/ENCFF784OKU/@@download/ENCFF784OKU.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF926LHG bed narrowPeak optimal idr thresholded peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067LQX, ENCFF349FQI, ENCFF419RSJ, ENCFF889RYR 212397 ENCODE Processing Pipeline 75ec5e416d30c6b0cc55ca9abd1dd655 https://www.encodeproject.org/files/ENCFF926LHG/@@download/ENCFF926LHG.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF887BST bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF926LHG 378657 ENCODE Processing Pipeline e36db0b0be6894e8c96dd57e8514c089 https://www.encodeproject.org/files/ENCFF887BST/@@download/ENCFF887BST.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF636MTC bigBed narrowPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF349FQI 10898258 ENCODE Processing Pipeline c1d26f1b6c8543717cafcff0c2bc16f8 https://www.encodeproject.org/files/ENCFF636MTC/@@download/ENCFF636MTC.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF905NDT bigBed narrowPeak peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067LQX 11245939 ENCODE Processing Pipeline 8ef0f5d864c3ed63af22f199bcf004bf https://www.encodeproject.org/files/ENCFF905NDT/@@download/ENCFF905NDT.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF003INQ bed narrowPeak conservative idr thresholded peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067LQX, ENCFF349FQI, ENCFF419RSJ, ENCFF889RYR 56357 ENCODE Processing Pipeline a7c9856d3d0425f174eef23ffd32929b https://www.encodeproject.org/files/ENCFF003INQ/@@download/ENCFF003INQ.bed.gz GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF440TQU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGR ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PBX3-human ENCAB000AJU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF003INQ 139631 ENCODE Processing Pipeline 1aad31bae4c2a2df681a2493a205c0d7 https://www.encodeproject.org/files/ENCFF440TQU/@@download/ENCFF440TQU.bigBed GRCh38 released moderate library complexity, control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient replicate concordance ENCFF950XSB fastq reads ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF419ZMU 2103184523 Richard Myers, HAIB bb7c3b068fc907d21590aa211547abaf https://www.encodeproject.org/files/ENCFF950XSB/@@download/ENCFF950XSB.fastq.gz HiSeq 2000 /files/ENCFF453QHY/ released antibody characterized with exemption experiment not submitted to GEO ENCFF419ZMU fastq reads ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF950XSB 2140006154 Richard Myers, HAIB 0e27ed29b40814c02e9d9e35404a429d https://www.encodeproject.org/files/ENCFF419ZMU/@@download/ENCFF419ZMU.fastq.gz HiSeq 2000 /files/ENCFF287ZTK/ released antibody characterized with exemption experiment not submitted to GEO ENCFF379HZY bam unfiltered alignments ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF419ZMU, ENCFF807MUK, ENCFF950XSB 4800815910 ENCODE Processing Pipeline 0aa5fc256c5bafe63e8c75aa19313cb2 https://www.encodeproject.org/files/ENCFF379HZY/@@download/ENCFF379HZY.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF403XAG bam alignments ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF419ZMU, ENCFF807MUK, ENCFF950XSB 3381817408 ENCODE Processing Pipeline 2456f0f750f49f0c7ce501aa65be82c5 https://www.encodeproject.org/files/ENCFF403XAG/@@download/ENCFF403XAG.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF399APN bam unfiltered alignments ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF419ZMU, ENCFF643CGH, ENCFF950XSB 4813027967 ENCODE Processing Pipeline f50f7c391981479249031c35a02bcae5 https://www.encodeproject.org/files/ENCFF399APN/@@download/ENCFF399APN.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF972HFX bam alignments ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF419ZMU, ENCFF643CGH, ENCFF950XSB 3380617791 ENCODE Processing Pipeline 676ad5c7600fa10e4ccc887ebe383949 https://www.encodeproject.org/files/ENCFF972HFX/@@download/ENCFF972HFX.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF978IWR bigBed narrowPeak peaks ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF746HAO 13379062 ENCODE Processing Pipeline f01f1856ac9c8d4ad1536ef50a16da50 https://www.encodeproject.org/files/ENCFF978IWR/@@download/ENCFF978IWR.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF068MCQ bigWig fold change over control ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF916QVZ, ENCFF972HFX 918639215 ENCODE Processing Pipeline 9c7f6a4669fdbdbe3b718472614747b5 https://www.encodeproject.org/files/ENCFF068MCQ/@@download/ENCFF068MCQ.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF095IET bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF746HAO 1057380 ENCODE Processing Pipeline 5bafdf9dadbd96249659a13b43c900b8 https://www.encodeproject.org/files/ENCFF095IET/@@download/ENCFF095IET.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF294FNN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF095IET 1940730 ENCODE Processing Pipeline b86c797ebfbc2d30e7ce431dc1ec4921 https://www.encodeproject.org/files/ENCFF294FNN/@@download/ENCFF294FNN.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF746HAO bed narrowPeak peaks ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF916QVZ, ENCFF972HFX 6882290 ENCODE Processing Pipeline a4e2030f1ef6480f73704f7809c6cf9c https://www.encodeproject.org/files/ENCFF746HAO/@@download/ENCFF746HAO.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF523QMX bigWig signal p-value ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF916QVZ, ENCFF972HFX 996576343 ENCODE Processing Pipeline 8cc9e6ffd40e26b05cb2cda9a9146116 https://www.encodeproject.org/files/ENCFF523QMX/@@download/ENCFF523QMX.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF691VMG bigWig fold change over control ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF403XAG, ENCFF629CIH 895936803 ENCODE Processing Pipeline dc2c2c3fbbc54f84cdf2bfc90bd71d6e https://www.encodeproject.org/files/ENCFF691VMG/@@download/ENCFF691VMG.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF074LXY bed narrowPeak peaks ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF403XAG, ENCFF629CIH 6926235 ENCODE Processing Pipeline a1c88cf606d45f6889b2dbea34c55ca8 https://www.encodeproject.org/files/ENCFF074LXY/@@download/ENCFF074LXY.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF914HYV bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF074LXY 1072565 ENCODE Processing Pipeline d0f9fe4154277822b3d6abeeb7aa23c7 https://www.encodeproject.org/files/ENCFF914HYV/@@download/ENCFF914HYV.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF582HYQ bigWig signal p-value ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF403XAG, ENCFF629CIH 975031058 ENCODE Processing Pipeline a8eca177d066a316a7bc6f25ad3fcd2b https://www.encodeproject.org/files/ENCFF582HYQ/@@download/ENCFF582HYQ.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF942TCY bigBed narrowPeak peaks ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF074LXY 13429564 ENCODE Processing Pipeline d5e9218a083d32ccc2077198b272caff https://www.encodeproject.org/files/ENCFF942TCY/@@download/ENCFF942TCY.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF839BEN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR633OEO ChIP-seq UBERON:0001159 sigmoid colon tissue adult female 51 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF914HYV 1964212 ENCODE Processing Pipeline 4f6277563973a8f15acea054f33de3da https://www.encodeproject.org/files/ENCFF839BEN/@@download/ENCFF839BEN.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF000PHQ bam alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PHY 430939954 Richard Myers, HAIB a7f3344984b3a6e5376092b31e65644d https://www.encodeproject.org/files/ENCFF000PHQ/@@download/ENCFF000PHQ.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PHR bigBed broadPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFU 999905 Richard Myers, HAIB e32f2070fbe9e7eaa47efd8242885ac7 https://www.encodeproject.org/files/ENCFF000PHR/@@download/ENCFF000PHR.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PHS bigBed broadPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFV 1006287 Richard Myers, HAIB bfecbdbfee10b314ef1421f2f930fc72 https://www.encodeproject.org/files/ENCFF000PHS/@@download/ENCFF000PHS.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PHT bam alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PIB 949591768 Richard Myers, HAIB 4e3dda1ce2cbb49afedbd125db92b5cb https://www.encodeproject.org/files/ENCFF000PHT/@@download/ENCFF000PHT.bam hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PHV bigWig raw signal ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 1 40525881 Richard Myers, HAIB f6bc595d246e620698177e90e81ef535 https://www.encodeproject.org/files/ENCFF000PHV/@@download/ENCFF000PHV.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PHW bigWig raw signal ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 1 22583769 Richard Myers, HAIB e89ca53658e665961ec2db1672bdfdfe https://www.encodeproject.org/files/ENCFF000PHW/@@download/ENCFF000PHW.bigWig hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PHY fastq reads ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 367132933 Richard Myers, HAIB 1c80fcc916728f51f089c44d2c3b53cc https://www.encodeproject.org/files/ENCFF000PHY/@@download/ENCFF000PHY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PIB fastq reads ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 613157825 Richard Myers, HAIB ce8f4f19bcafbe863bf47877f0eec291 https://www.encodeproject.org/files/ENCFF000PIB/@@download/ENCFF000PIB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF001UFU bed broadPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 1 686038 Richard Myers, HAIB d5aed681fb4cbb6ff0cddc57bfa46c21 https://www.encodeproject.org/files/ENCFF001UFU/@@download/ENCFF001UFU.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UFV bed broadPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 1 698260 Richard Myers, HAIB 9d2077a42fa7b4b48b52c13985b4cbe6 https://www.encodeproject.org/files/ENCFF001UFV/@@download/ENCFF001UFV.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CKI bed narrowPeak optimal idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1006721 ENCODE Consortium Analysis Working Group 435af70b9e131037c1925fb19659d220 https://www.encodeproject.org/files/ENCFF002CKI/@@download/ENCFF002CKI.bed.gz hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF044DIF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE ENCFF002CKI 2358724 ENCODE Consortium 79a2d6d88fb37e601059f13e117d3bb8 https://www.encodeproject.org/files/ENCFF044DIF/@@download/ENCFF044DIF.bigBed hg19 archived control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF782PBE bam unfiltered alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHY, ENCFF643CGH 502341382 ENCODE Processing Pipeline 8dc19253e5dca35d234a2113870e8288 https://www.encodeproject.org/files/ENCFF782PBE/@@download/ENCFF782PBE.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF332SRJ bam alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHY, ENCFF643CGH 323539184 ENCODE Processing Pipeline 1cae7a37ca9ff7a26c0c5835c1bda9c6 https://www.encodeproject.org/files/ENCFF332SRJ/@@download/ENCFF332SRJ.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF401YVR bam alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIB, ENCFF643CGH 528614038 ENCODE Processing Pipeline 5d0b8377cad4fc8793ff3e9e4627e437 https://www.encodeproject.org/files/ENCFF401YVR/@@download/ENCFF401YVR.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF247XZI bam unfiltered alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIB, ENCFF643CGH 851096792 ENCODE Processing Pipeline 79691c0a24cd8bb9e6f64e7ef8c2c53b https://www.encodeproject.org/files/ENCFF247XZI/@@download/ENCFF247XZI.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF566DDF bam unfiltered alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHY, ENCFF807MUK 501433418 ENCODE Processing Pipeline d550698e3c2a4e7e98a7ac3ad0a4b804 https://www.encodeproject.org/files/ENCFF566DDF/@@download/ENCFF566DDF.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF793JQM bam alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHY, ENCFF807MUK 323760310 ENCODE Processing Pipeline 6de5fe187e6b49fff81f4d43b94fc6f4 https://www.encodeproject.org/files/ENCFF793JQM/@@download/ENCFF793JQM.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF144CKE bam unfiltered alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIB, ENCFF807MUK 848757471 ENCODE Processing Pipeline 9cb79a5825a4392a7106aa68fb535d0d https://www.encodeproject.org/files/ENCFF144CKE/@@download/ENCFF144CKE.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF587IJL bam alignments ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIB, ENCFF807MUK 528808734 ENCODE Processing Pipeline d7f3da992071c0e9027568acc7abaf94 https://www.encodeproject.org/files/ENCFF587IJL/@@download/ENCFF587IJL.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF818SCE bigWig signal p-value ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401YVR 562177193 ENCODE Processing Pipeline 1299dac91f90457a64d0c356366cc4ea https://www.encodeproject.org/files/ENCFF818SCE/@@download/ENCFF818SCE.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF260LDC bigWig signal p-value ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF332SRJ 529449951 ENCODE Processing Pipeline a3568416c9ba64b52e04a5b0960212ee https://www.encodeproject.org/files/ENCFF260LDC/@@download/ENCFF260LDC.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF169QGE bigWig signal p-value ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF332SRJ, ENCFF401YVR 680116390 ENCODE Processing Pipeline 39eca1270b2deaccb3ded916eb26f8ab https://www.encodeproject.org/files/ENCFF169QGE/@@download/ENCFF169QGE.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF912HGV bigWig fold change over control ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401YVR 425291893 ENCODE Processing Pipeline c101c87f3c85d16811d06ee53f91ba50 https://www.encodeproject.org/files/ENCFF912HGV/@@download/ENCFF912HGV.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF968SFY bigBed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF249LIC 10929964 ENCODE Processing Pipeline 064058b8d2b840eddffe99a839d170b3 https://www.encodeproject.org/files/ENCFF968SFY/@@download/ENCFF968SFY.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF623UTX bigBed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF465GHM 9550864 ENCODE Processing Pipeline 67ad73d4f8bfdc656220027cc7fdaed0 https://www.encodeproject.org/files/ENCFF623UTX/@@download/ENCFF623UTX.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF465GHM bed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF332SRJ 4541294 ENCODE Processing Pipeline b06791650b9bf53e27717c4e15138494 https://www.encodeproject.org/files/ENCFF465GHM/@@download/ENCFF465GHM.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF648VIL bed narrowPeak conservative idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249LIC, ENCFF286HDS, ENCFF419RSJ, ENCFF465GHM 696650 ENCODE Processing Pipeline aee9e0c4a7d0575402c949f4b5cfb7d7 https://www.encodeproject.org/files/ENCFF648VIL/@@download/ENCFF648VIL.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF152BOT bed narrowPeak optimal idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF249LIC, ENCFF286HDS, ENCFF419RSJ, ENCFF465GHM 844355 ENCODE Processing Pipeline 1faa3c11f60f906af93089660d86ec97 https://www.encodeproject.org/files/ENCFF152BOT/@@download/ENCFF152BOT.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF701JGZ bigWig fold change over control ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF332SRJ 271357260 ENCODE Processing Pipeline 67bf83ae550a4366fb0019688d9bebd5 https://www.encodeproject.org/files/ENCFF701JGZ/@@download/ENCFF701JGZ.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF286HDS bed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF332SRJ, ENCFF401YVR 6068627 ENCODE Processing Pipeline 8f4780d813b3bbd42c41b212b54313a9 https://www.encodeproject.org/files/ENCFF286HDS/@@download/ENCFF286HDS.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF163CFH bigWig fold change over control ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF332SRJ, ENCFF401YVR 582103939 ENCODE Processing Pipeline 68d48ac66cdcacba3ff5c3dce252fe54 https://www.encodeproject.org/files/ENCFF163CFH/@@download/ENCFF163CFH.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF249LIC bed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401YVR 5027153 ENCODE Processing Pipeline 3a0912775249b83b032e5de9e4ef4884 https://www.encodeproject.org/files/ENCFF249LIC/@@download/ENCFF249LIC.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF682LEK bigBed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF286HDS 11639120 ENCODE Processing Pipeline 558bb9eff900cc58d34c812d6bb4a1c3 https://www.encodeproject.org/files/ENCFF682LEK/@@download/ENCFF682LEK.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF752MBL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF648VIL 1191019 ENCODE Processing Pipeline 3d3dfaaeea31dedff25af7c0b786f847 https://www.encodeproject.org/files/ENCFF752MBL/@@download/ENCFF752MBL.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF156AXP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF152BOT 1723916 ENCODE Processing Pipeline 06f8edf40501b82f0e0721effaae9096 https://www.encodeproject.org/files/ENCFF156AXP/@@download/ENCFF156AXP.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF198ORM bigWig signal p-value ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF346RZT, ENCFF587IJL 579053001 ENCODE Processing Pipeline db2a50eb1f189a7e3bf483bc0787cbb9 https://www.encodeproject.org/files/ENCFF198ORM/@@download/ENCFF198ORM.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF472OBT bigWig fold change over control ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF346RZT, ENCFF587IJL 422737206 ENCODE Processing Pipeline 899dfce8b92d38069a36c914cd66f266 https://www.encodeproject.org/files/ENCFF472OBT/@@download/ENCFF472OBT.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF496RWW bigWig signal p-value ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF793JQM 572638538 ENCODE Processing Pipeline 1c28b8b09a40d571f3cc6d95d9754025 https://www.encodeproject.org/files/ENCFF496RWW/@@download/ENCFF496RWW.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF658RGX bigWig signal p-value ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF346RZT, ENCFF587IJL, ENCFF793JQM 675364869 ENCODE Processing Pipeline 198fae3935dc2667b1042f1f3366ba8c https://www.encodeproject.org/files/ENCFF658RGX/@@download/ENCFF658RGX.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF665ZDL bigWig fold change over control ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF793JQM 268619791 ENCODE Processing Pipeline e96e9ba172096b4f03448aea182900ab https://www.encodeproject.org/files/ENCFF665ZDL/@@download/ENCFF665ZDL.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF251GTF bed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF346RZT, ENCFF793JQM 4431043 ENCODE Processing Pipeline e3de3a2947ccf509e7c2778d2a69d2b3 https://www.encodeproject.org/files/ENCFF251GTF/@@download/ENCFF251GTF.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF871KVO bigWig fold change over control ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF346RZT, ENCFF587IJL, ENCFF793JQM 582662326 ENCODE Processing Pipeline a09d977f123f2f456221e8116f1079b4 https://www.encodeproject.org/files/ENCFF871KVO/@@download/ENCFF871KVO.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF997MQT bed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF346RZT, ENCFF587IJL 5132126 ENCODE Processing Pipeline 5ca2e6d07e1b6f5a6600f2c6724c35d7 https://www.encodeproject.org/files/ENCFF997MQT/@@download/ENCFF997MQT.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF596END bed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF346RZT, ENCFF587IJL, ENCFF793JQM 6074566 ENCODE Processing Pipeline 2d09d658b540a3920b30da668126dcad https://www.encodeproject.org/files/ENCFF596END/@@download/ENCFF596END.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF160OSA bigBed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF997MQT 11061605 ENCODE Processing Pipeline 69c42eef65daea0ca583d72dbedcc517 https://www.encodeproject.org/files/ENCFF160OSA/@@download/ENCFF160OSA.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF966HBD bigBed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF251GTF 9379843 ENCODE Processing Pipeline 478aa501412780e72524bd9867ee75ab https://www.encodeproject.org/files/ENCFF966HBD/@@download/ENCFF966HBD.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF958SRR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF236SQL 1500402 ENCODE Processing Pipeline 45d91b542f865ad93b2af9c5aff84071 https://www.encodeproject.org/files/ENCFF958SRR/@@download/ENCFF958SRR.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF841ZHE bigBed narrowPeak peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF596END 11646061 ENCODE Processing Pipeline f034ac5f1aef57b93446b4b706ccc4d8 https://www.encodeproject.org/files/ENCFF841ZHE/@@download/ENCFF841ZHE.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF236SQL bed narrowPeak conservative idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF251GTF, ENCFF596END, ENCFF997MQT 698820 ENCODE Processing Pipeline d19f3e569ecd6ac593f910cc6ddce3d5 https://www.encodeproject.org/files/ENCFF236SQL/@@download/ENCFF236SQL.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF978IWS bed narrowPeak optimal idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF251GTF, ENCFF596END, ENCFF997MQT 846246 ENCODE Processing Pipeline 7762c6c6fa31a9c99ee27eedaac3b89f https://www.encodeproject.org/files/ENCFF978IWS/@@download/ENCFF978IWS.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF719GSZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA1-human ENCAB000AGM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF978IWS 1731884 ENCODE Processing Pipeline 3838558d6e47ceba60ed7b723a362bcf https://www.encodeproject.org/files/ENCFF719GSZ/@@download/ENCFF719GSZ.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read depth ENCFF000PRN bam alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PSA 1041789117 Richard Myers, HAIB f8436fb20d3e88928b1e080c9194244a https://www.encodeproject.org/files/ENCFF000PRN/@@download/ENCFF000PRN.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PRO bigBed broadPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UHY 607782 Richard Myers, HAIB fa46ca8bb9c94ff0561ebbbcd633ffc7 https://www.encodeproject.org/files/ENCFF000PRO/@@download/ENCFF000PRO.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PRP bigBed broadPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UHZ 984623 Richard Myers, HAIB 47f8244d220999ebaa77cc01ad7bd7a9 https://www.encodeproject.org/files/ENCFF000PRP/@@download/ENCFF000PRP.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PRR bam alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PSH 1465001918 Richard Myers, HAIB b3b7793ca90ea27fb1e393394c101f60 https://www.encodeproject.org/files/ENCFF000PRR/@@download/ENCFF000PRR.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PRS bigWig raw signal ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 13627076 Richard Myers, HAIB c1a99375d8ea4d4b42d6fe3d4601e600 https://www.encodeproject.org/files/ENCFF000PRS/@@download/ENCFF000PRS.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PRT bigWig raw signal ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 59404635 Richard Myers, HAIB 884cb558dc2a2987c0d2a3eb666f57ce https://www.encodeproject.org/files/ENCFF000PRT/@@download/ENCFF000PRT.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000PSA fastq reads ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1615513199 Richard Myers, HAIB 9a40f3eedbbfe35b39b8e68de0885499 https://www.encodeproject.org/files/ENCFF000PSA/@@download/ENCFF000PSA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POC/ released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PSH fastq reads ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 2076369288 Richard Myers, HAIB 512cb159153af83dd17a9f6d9d330050 https://www.encodeproject.org/files/ENCFF000PSH/@@download/ENCFF000PSH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POH/ released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UHY bed broadPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 319152 Richard Myers, HAIB cc7985356581dbaa9b69a955d5c72c1b https://www.encodeproject.org/files/ENCFF001UHY/@@download/ENCFF001UHY.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UHZ bed broadPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 621872 Richard Myers, HAIB 6e353961de2ae63e7c7ccc39a8e423b6 https://www.encodeproject.org/files/ENCFF001UHZ/@@download/ENCFF001UHZ.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CLH bed narrowPeak optimal idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 472354 ENCODE Consortium Analysis Working Group 4f5fc00411508310c161a6b2e77695e1 https://www.encodeproject.org/files/ENCFF002CLH/@@download/ENCFF002CLH.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF533STT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE ENCFF002CLH 1084238 ENCODE Consortium b631c2843be23d904d6b7fc0d446f6b6 https://www.encodeproject.org/files/ENCFF533STT/@@download/ENCFF533STT.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF582CJF bam alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PSA, ENCFF643CGH 637033775 ENCODE Processing Pipeline 6cc90749c353d7f1acb6057538d21dd0 https://www.encodeproject.org/files/ENCFF582CJF/@@download/ENCFF582CJF.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF985USW bam unfiltered alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PSA, ENCFF643CGH 1911908952 ENCODE Processing Pipeline 01adbe85dad7457f9b8ba23f8eb1e81e https://www.encodeproject.org/files/ENCFF985USW/@@download/ENCFF985USW.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF270TGL bam alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSH, ENCFF643CGH 999909157 ENCODE Processing Pipeline cb69288d1a08efbb52fb3cd6ac030688 https://www.encodeproject.org/files/ENCFF270TGL/@@download/ENCFF270TGL.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF298ULD bam unfiltered alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSH, ENCFF643CGH 2467662683 ENCODE Processing Pipeline 52dee8f83311c9368a0aeb0dc78ddc6f https://www.encodeproject.org/files/ENCFF298ULD/@@download/ENCFF298ULD.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF958DBW bam unfiltered alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PSA, ENCFF807MUK 1905259467 ENCODE Processing Pipeline 1aaed7164683b32e77db1c1b38b66628 https://www.encodeproject.org/files/ENCFF958DBW/@@download/ENCFF958DBW.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF523DNB bam alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PSA, ENCFF807MUK 637421868 ENCODE Processing Pipeline 2ba89bbb1d33a379d3215ce447b0e3f2 https://www.encodeproject.org/files/ENCFF523DNB/@@download/ENCFF523DNB.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF592BVT bam unfiltered alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSH, ENCFF807MUK 2460260248 ENCODE Processing Pipeline e1346e72f0f2214f50e36183fc65ce3c https://www.encodeproject.org/files/ENCFF592BVT/@@download/ENCFF592BVT.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF871ASR bam alignments ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSH, ENCFF807MUK 1000467222 ENCODE Processing Pipeline ea9c79fe7a767ae317f4c8d10472980b https://www.encodeproject.org/files/ENCFF871ASR/@@download/ENCFF871ASR.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF463GXU bigWig fold change over control ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF472OOV, ENCFF523DNB 322399026 ENCODE Processing Pipeline f61b4840e74c191ddc9582f40112f097 https://www.encodeproject.org/files/ENCFF463GXU/@@download/ENCFF463GXU.bigWig hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF287PVJ bigWig signal p-value ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF472OOV, ENCFF871ASR 527440712 ENCODE Processing Pipeline 1d24677da536c4f2e025a50b138ebae9 https://www.encodeproject.org/files/ENCFF287PVJ/@@download/ENCFF287PVJ.bigWig hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF316GUJ bed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF472OOV, ENCFF523DNB 4140152 ENCODE Processing Pipeline 61ce2d1eaafd5cd80daec838734efe7b https://www.encodeproject.org/files/ENCFF316GUJ/@@download/ENCFF316GUJ.bed.gz hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF308DEQ bed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF472OOV, ENCFF871ASR 5107914 ENCODE Processing Pipeline 49a9703abf533e94633ee660cd406419 https://www.encodeproject.org/files/ENCFF308DEQ/@@download/ENCFF308DEQ.bed.gz hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF817BLC bigBed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF308DEQ 11196773 ENCODE Processing Pipeline 2b417e0e6ca8e2e035717e48da3f186e https://www.encodeproject.org/files/ENCFF817BLC/@@download/ENCFF817BLC.bigBed hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF684BLN bed narrowPeak optimal idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF308DEQ, ENCFF316GUJ, ENCFF805TIZ 400681 ENCODE Processing Pipeline 3899b7d76e13cf4087901a7fac9fddb1 https://www.encodeproject.org/files/ENCFF684BLN/@@download/ENCFF684BLN.bed.gz hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF313QVT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF684BLN 783862 ENCODE Processing Pipeline c43918ea7042f6431c97accef9f94835 https://www.encodeproject.org/files/ENCFF313QVT/@@download/ENCFF313QVT.bigBed hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF424NZM bigWig fold change over control ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334MOO, ENCFF472OOV, ENCFF871ASR 467116802 ENCODE Processing Pipeline ff6ff26c38de3ee9560dafe15cd37642 https://www.encodeproject.org/files/ENCFF424NZM/@@download/ENCFF424NZM.bigWig hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF253PSX bigWig signal p-value ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF193YIO, ENCFF582CJF, ENCFF943DZB 502346219 ENCODE Processing Pipeline a92b2bd2fe7d217a676cfd68d6958694 https://www.encodeproject.org/files/ENCFF253PSX/@@download/ENCFF253PSX.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF169BHA bigWig signal p-value ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF270TGL, ENCFF943DZB 599210640 ENCODE Processing Pipeline c1b811aa698cb0766303b8f03b503e15 https://www.encodeproject.org/files/ENCFF169BHA/@@download/ENCFF169BHA.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF586WRZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF914IFQ 777398 ENCODE Processing Pipeline b1f5d9b811abc235528e3ba104c4a2a3 https://www.encodeproject.org/files/ENCFF586WRZ/@@download/ENCFF586WRZ.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF697UHP bigWig signal p-value ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF334MOO, ENCFF472OOV, ENCFF523DNB 534602242 ENCODE Processing Pipeline be83b0560212d678d048501425d52930 https://www.encodeproject.org/files/ENCFF697UHP/@@download/ENCFF697UHP.bigWig hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF023XNI bigWig signal p-value ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF472OOV, ENCFF523DNB, ENCFF871ASR 613222944 ENCODE Processing Pipeline e28fae5017881771f8cefc7eb7d947c4 https://www.encodeproject.org/files/ENCFF023XNI/@@download/ENCFF023XNI.bigWig hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF462BPN bigWig fold change over control ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF472OOV, ENCFF523DNB, ENCFF871ASR 667859208 ENCODE Processing Pipeline c14b44ee6ea23f1c529e479bf86f12a1 https://www.encodeproject.org/files/ENCFF462BPN/@@download/ENCFF462BPN.bigWig hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF805TIZ bed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334MOO, ENCFF472OOV, ENCFF523DNB, ENCFF871ASR 5374404 ENCODE Processing Pipeline 6089dde32b4bedf175c22fa3f08d9aae https://www.encodeproject.org/files/ENCFF805TIZ/@@download/ENCFF805TIZ.bed.gz hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF962DEO bed narrowPeak conservative idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF308DEQ, ENCFF316GUJ, ENCFF805TIZ 316813 ENCODE Processing Pipeline e9c1d0bbabca6e4ae1108c4d7221e3b8 https://www.encodeproject.org/files/ENCFF962DEO/@@download/ENCFF962DEO.bed.gz hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF704AGF bigBed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF316GUJ 8729141 ENCODE Processing Pipeline 433212b588cfd87add1fc9ec706b6cc4 https://www.encodeproject.org/files/ENCFF704AGF/@@download/ENCFF704AGF.bigBed hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF171RTW bigBed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF805TIZ 11532088 ENCODE Processing Pipeline e4ddb239bf0a1fad021d11f41af7aeaf https://www.encodeproject.org/files/ENCFF171RTW/@@download/ENCFF171RTW.bigBed hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF842SEA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF962DEO 662988 ENCODE Processing Pipeline b7c745859bf972ae07c6952cf270693f https://www.encodeproject.org/files/ENCFF842SEA/@@download/ENCFF842SEA.bigBed hg19 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF609GMC bed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF193YIO, ENCFF582CJF, ENCFF943DZB 4134608 ENCODE Processing Pipeline 4ee596125ffccbc75e59de3232ba6f90 https://www.encodeproject.org/files/ENCFF609GMC/@@download/ENCFF609GMC.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF770HZA bed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF270TGL, ENCFF943DZB 5104473 ENCODE Processing Pipeline cb48efd63aae2f930e554483b1899f20 https://www.encodeproject.org/files/ENCFF770HZA/@@download/ENCFF770HZA.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF924RJY bigWig fold change over control ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193YIO, ENCFF270TGL, ENCFF582CJF, ENCFF943DZB 667266738 ENCODE Processing Pipeline b5477c3ed61c94b7993d414a34fc3335 https://www.encodeproject.org/files/ENCFF924RJY/@@download/ENCFF924RJY.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF089NTQ bed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193YIO, ENCFF270TGL, ENCFF582CJF, ENCFF943DZB 5373153 ENCODE Processing Pipeline b460aeb92d91a31448ab3cf7f5960f99 https://www.encodeproject.org/files/ENCFF089NTQ/@@download/ENCFF089NTQ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF176UJQ bigBed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF770HZA 11196045 ENCODE Processing Pipeline 8c7361aa7c3248d337bdb3103b404630 https://www.encodeproject.org/files/ENCFF176UJQ/@@download/ENCFF176UJQ.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF895AOF bed narrowPeak conservative idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089NTQ, ENCFF419RSJ, ENCFF609GMC, ENCFF770HZA 316541 ENCODE Processing Pipeline 63cdd381b0e7843d8b8211630af1be29 https://www.encodeproject.org/files/ENCFF895AOF/@@download/ENCFF895AOF.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF873NAK bigWig fold change over control ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF193YIO, ENCFF582CJF, ENCFF943DZB 321238685 ENCODE Processing Pipeline 6160bb3882c676651328f009067047b3 https://www.encodeproject.org/files/ENCFF873NAK/@@download/ENCFF873NAK.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF530LZD bigWig signal p-value ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193YIO, ENCFF270TGL, ENCFF582CJF, ENCFF943DZB 611798547 ENCODE Processing Pipeline 4fe994a1e207b06fd536b467b43ce4e4 https://www.encodeproject.org/files/ENCFF530LZD/@@download/ENCFF530LZD.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF065RRR bigWig fold change over control ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193YIO, ENCFF270TGL, ENCFF943DZB 466918968 ENCODE Processing Pipeline 97c4e082118865b308e08df2839fd46d https://www.encodeproject.org/files/ENCFF065RRR/@@download/ENCFF065RRR.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF021GCG bigBed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF609GMC 8725530 ENCODE Processing Pipeline 667a5138ac8cf285cf36e6f78ceea21d https://www.encodeproject.org/files/ENCFF021GCG/@@download/ENCFF021GCG.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF633YRX bigBed narrowPeak peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089NTQ 11533049 ENCODE Processing Pipeline e7881182e5fecab74d15f20b8d6dbf43 https://www.encodeproject.org/files/ENCFF633YRX/@@download/ENCFF633YRX.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF498RHX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF895AOF 663504 ENCODE Processing Pipeline 7e3f3d6ed064cd06ec41da21a8b1a804 https://www.encodeproject.org/files/ENCFF498RHX/@@download/ENCFF498RHX.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF914IFQ bed narrowPeak optimal idr thresholded peaks ENCSR000BGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089NTQ, ENCFF419RSJ, ENCFF609GMC, ENCFF770HZA 395864 ENCODE Processing Pipeline 17a74daeb420617d9eecadc51715cc37 https://www.encodeproject.org/files/ENCFF914IFQ/@@download/ENCFF914IFQ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OZT bam alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000PAI 1464010375 Richard Myers, HAIB c4931758f516c1d8467a647b5067f3ae https://www.encodeproject.org/files/ENCFF000OZT/@@download/ENCFF000OZT.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000OZW bigBed broadPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UDY 328050 Richard Myers, HAIB b7f60840f8e73cad78cd2050c9a67ca1 https://www.encodeproject.org/files/ENCFF000OZW/@@download/ENCFF000OZW.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000OZX bigBed broadPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UDZ 378540 Richard Myers, HAIB 78a7dab9b30f4d9901c381bcd5bc07d8 https://www.encodeproject.org/files/ENCFF000OZX/@@download/ENCFF000OZX.bigBed hg19 archived low read depth biological replicates with identical biosample ENCFF000OZY bam alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000PAH 1472011638 Richard Myers, HAIB 3378bf46acff8c498b390b16c81de994 https://www.encodeproject.org/files/ENCFF000OZY/@@download/ENCFF000OZY.bam hg19 archived low read depth biological replicates with identical biosample ENCFF000PAA bigWig raw signal ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 220724631 Richard Myers, HAIB 90236b81fcb15d7829dceb11d4ec7ed2 https://www.encodeproject.org/files/ENCFF000PAA/@@download/ENCFF000PAA.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000PAB bigWig raw signal ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 238020385 Richard Myers, HAIB 5b4f9eae96f4cd627fc951a12361f8d1 https://www.encodeproject.org/files/ENCFF000PAB/@@download/ENCFF000PAB.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF000PAH fastq reads ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1516420945 Richard Myers, HAIB 5fc5d40c03149f8ffd58188bf4ebe669 https://www.encodeproject.org/files/ENCFF000PAH/@@download/ENCFF000PAH.fastq.gz HiSeq 2000 /files/ENCFF000PBY/ released low read depth biological replicates with identical biosample ENCFF000PAI fastq reads ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1534455515 Richard Myers, HAIB 67761c9f1cfbee9042f7e8ab71e4e3b4 https://www.encodeproject.org/files/ENCFF000PAI/@@download/ENCFF000PAI.fastq.gz HiSeq 2000 /files/ENCFF000PBW/ released low read depth biological replicates with identical biosample ENCFF001UDY bed broadPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 161923 Richard Myers, HAIB f51811624309dee9545a48bec0b6c649 https://www.encodeproject.org/files/ENCFF001UDY/@@download/ENCFF001UDY.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF001UDZ bed broadPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 198999 Richard Myers, HAIB 984de86e2efb88e3e5012eeaa60eaccf https://www.encodeproject.org/files/ENCFF001UDZ/@@download/ENCFF001UDZ.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample ENCFF726DLQ bam alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PAH, ENCFF643CGH 1222561961 ENCODE Processing Pipeline ca974efe65fb3fd50536aef49685ea0c https://www.encodeproject.org/files/ENCFF726DLQ/@@download/ENCFF726DLQ.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF219BXD bam unfiltered alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PAH, ENCFF643CGH 1583175841 ENCODE Processing Pipeline 40471de0d2b683623fcc07cf19859c2c https://www.encodeproject.org/files/ENCFF219BXD/@@download/ENCFF219BXD.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF087HBR bam unfiltered alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PAI, ENCFF807MUK 1562292031 ENCODE Processing Pipeline 000b850ba66c48e531dae49365b9ef99 https://www.encodeproject.org/files/ENCFF087HBR/@@download/ENCFF087HBR.bam hg19 released low read depth biological replicates with identical biosample ENCFF560UTZ bam unfiltered alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PAH, ENCFF807MUK 1580922937 ENCODE Processing Pipeline 970aa951d3236d41f2d9168090b17845 https://www.encodeproject.org/files/ENCFF560UTZ/@@download/ENCFF560UTZ.bam hg19 released low read depth biological replicates with identical biosample ENCFF242DVM bam alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PAI, ENCFF807MUK 1079615364 ENCODE Processing Pipeline c56c95a6ddeabb8e566494a6108bdc05 https://www.encodeproject.org/files/ENCFF242DVM/@@download/ENCFF242DVM.bam hg19 released low read depth biological replicates with identical biosample ENCFF904LDR bam alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PAH, ENCFF807MUK 1222220289 ENCODE Processing Pipeline 7107162899eb1d927088c7ceace97fbe https://www.encodeproject.org/files/ENCFF904LDR/@@download/ENCFF904LDR.bam hg19 released low read depth biological replicates with identical biosample ENCFF374UIA bam unfiltered alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PAI, ENCFF643CGH 1564295327 ENCODE Processing Pipeline 82408c82e379f98417def4f3b11873a9 https://www.encodeproject.org/files/ENCFF374UIA/@@download/ENCFF374UIA.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF073LHY bam alignments ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PAI, ENCFF643CGH 1079969044 ENCODE Processing Pipeline 4ca6d97330c25354564bfa5f6e995fac https://www.encodeproject.org/files/ENCFF073LHY/@@download/ENCFF073LHY.bam GRCh38 released low read depth biological replicates with identical biosample ENCFF999JKB bigWig signal p-value ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF073LHY 439823741 ENCODE Processing Pipeline f13b0ac03cc4bc0ad0dc5787d4f984c9 https://www.encodeproject.org/files/ENCFF999JKB/@@download/ENCFF999JKB.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF136DCL bigWig signal p-value ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF726DLQ 565814593 ENCODE Processing Pipeline 1bd189f4f57894602ec8fa97dbfb244b https://www.encodeproject.org/files/ENCFF136DCL/@@download/ENCFF136DCL.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF193VLH bigWig signal p-value ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF073LHY, ENCFF726DLQ 886029915 ENCODE Processing Pipeline 24f84411375cfcacc10ac54c40b02b36 https://www.encodeproject.org/files/ENCFF193VLH/@@download/ENCFF193VLH.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF005TMO bigWig fold change over control ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF073LHY 420414285 ENCODE Processing Pipeline 2946ff9ac31402a9ac91d7e6c0fed36e https://www.encodeproject.org/files/ENCFF005TMO/@@download/ENCFF005TMO.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF629EVV bigWig fold change over control ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF726DLQ 477345777 ENCODE Processing Pipeline b8428fdd435655e3f3b4335e5ee3e21e https://www.encodeproject.org/files/ENCFF629EVV/@@download/ENCFF629EVV.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF415KJH bigWig fold change over control ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF073LHY, ENCFF726DLQ 913537317 ENCODE Processing Pipeline f25660929d99e671890567c412ccb0d2 https://www.encodeproject.org/files/ENCFF415KJH/@@download/ENCFF415KJH.bigWig GRCh38 released low read depth biological replicates with identical biosample ENCFF833ZRV bed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF726DLQ 5301138 ENCODE Processing Pipeline 0aeb1db6a08db0b66fb5970fe6d9028f https://www.encodeproject.org/files/ENCFF833ZRV/@@download/ENCFF833ZRV.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF021RCH bigBed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF973IDD 13059245 ENCODE Processing Pipeline 0ef36c47248a2f3e6e72e5bb0d79ffd0 https://www.encodeproject.org/files/ENCFF021RCH/@@download/ENCFF021RCH.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF987GKK bigBed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF833ZRV 10922580 ENCODE Processing Pipeline f2f986a243a311fec7a1638d7f3d5d7d https://www.encodeproject.org/files/ENCFF987GKK/@@download/ENCFF987GKK.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF488HDC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF333VCK 859601 ENCODE Processing Pipeline f311e7daec5aa0bccad3eea7ece69fe5 https://www.encodeproject.org/files/ENCFF488HDC/@@download/ENCFF488HDC.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF998KDQ bed narrowPeak optimal idr thresholded peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF833ZRV, ENCFF848GBZ, ENCFF973IDD 423275 ENCODE Processing Pipeline 74b7f5b3689916cf722046e595380c61 https://www.encodeproject.org/files/ENCFF998KDQ/@@download/ENCFF998KDQ.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF277ZOA bigBed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF848GBZ 13390118 ENCODE Processing Pipeline 2b180e4f8698248cf6b3165d57ad51dc https://www.encodeproject.org/files/ENCFF277ZOA/@@download/ENCFF277ZOA.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF258AQQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF998KDQ 913404 ENCODE Processing Pipeline 4d37edf63d56e565c4ee69b64e8b6b94 https://www.encodeproject.org/files/ENCFF258AQQ/@@download/ENCFF258AQQ.bigBed GRCh38 released low read depth biological replicates with identical biosample ENCFF333VCK bed narrowPeak conservative idr thresholded peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF833ZRV, ENCFF848GBZ, ENCFF973IDD 390371 ENCODE Processing Pipeline e9aa814badcb1197446af03199d12fd3 https://www.encodeproject.org/files/ENCFF333VCK/@@download/ENCFF333VCK.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF848GBZ bed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF073LHY, ENCFF726DLQ 6294409 ENCODE Processing Pipeline 910044dd3dd861c75f9743182eb5dc0f https://www.encodeproject.org/files/ENCFF848GBZ/@@download/ENCFF848GBZ.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF973IDD bed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF073LHY 5305060 ENCODE Processing Pipeline 1f5cfee851b08608edb1b42e4bbf944e https://www.encodeproject.org/files/ENCFF973IDD/@@download/ENCFF973IDD.bed.gz GRCh38 released low read depth biological replicates with identical biosample ENCFF395RRX bigWig signal p-value ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF242DVM, ENCFF831FMU 530772830 ENCODE Processing Pipeline f72f777d3bcdaaa4aa63f47505cdde5b https://www.encodeproject.org/files/ENCFF395RRX/@@download/ENCFF395RRX.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF383XWW bed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF622MSR, ENCFF904LDR 5301624 ENCODE Processing Pipeline f78001de2701c3d1ead6e1dfb6d25875 https://www.encodeproject.org/files/ENCFF383XWW/@@download/ENCFF383XWW.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF772HIT bed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF242DVM, ENCFF831FMU 5306321 ENCODE Processing Pipeline 2d56dc8d6dd0bc4727e57c7c1d979985 https://www.encodeproject.org/files/ENCFF772HIT/@@download/ENCFF772HIT.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF215YYW bed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF242DVM, ENCFF622MSR, ENCFF831FMU, ENCFF904LDR 6298537 ENCODE Processing Pipeline 70bee3f9011e67a871d65aad2e2e1a73 https://www.encodeproject.org/files/ENCFF215YYW/@@download/ENCFF215YYW.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF267EWE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF950JTT 858286 ENCODE Processing Pipeline 25162ac3f28c669b222ab815392e09dd https://www.encodeproject.org/files/ENCFF267EWE/@@download/ENCFF267EWE.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF043RCO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF088WYS 921872 ENCODE Processing Pipeline abcf74cea78340e5272c65b077903204 https://www.encodeproject.org/files/ENCFF043RCO/@@download/ENCFF043RCO.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF537AUT bigWig fold change over control ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF242DVM, ENCFF831FMU 429236555 ENCODE Processing Pipeline 56b4108ad6db8e5e0ac70a7395ca6345 https://www.encodeproject.org/files/ENCFF537AUT/@@download/ENCFF537AUT.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF413DFS bigWig fold change over control ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF622MSR, ENCFF904LDR 471507573 ENCODE Processing Pipeline 257359085627986b551d51659c8d2033 https://www.encodeproject.org/files/ENCFF413DFS/@@download/ENCFF413DFS.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF024PXO bigWig fold change over control ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF242DVM, ENCFF622MSR, ENCFF831FMU, ENCFF904LDR 909935909 ENCODE Processing Pipeline 439cd6617bfede12dc708abc51644fff https://www.encodeproject.org/files/ENCFF024PXO/@@download/ENCFF024PXO.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF303AHQ bigBed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF772HIT 13058506 ENCODE Processing Pipeline 87e8d140aa76ddd8a2d27c9120a989ac https://www.encodeproject.org/files/ENCFF303AHQ/@@download/ENCFF303AHQ.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF353MSD bigBed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF383XWW 10928209 ENCODE Processing Pipeline 0f4e1bf089da8e0dc96f105ef0fa3c5d https://www.encodeproject.org/files/ENCFF353MSD/@@download/ENCFF353MSD.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF656PAC bigBed narrowPeak peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF215YYW 13387251 ENCODE Processing Pipeline 1b5b8e50a229064d6507a2c2bbd6ea00 https://www.encodeproject.org/files/ENCFF656PAC/@@download/ENCFF656PAC.bigBed hg19 released low read depth biological replicates with identical biosample ENCFF580SZH bigWig signal p-value ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF622MSR, ENCFF904LDR 446298355 ENCODE Processing Pipeline 72ad3bff91ab871126519b46156edc3d https://www.encodeproject.org/files/ENCFF580SZH/@@download/ENCFF580SZH.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF209ILW bigWig signal p-value ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF242DVM, ENCFF622MSR, ENCFF831FMU, ENCFF904LDR 945654291 ENCODE Processing Pipeline 7f1f6987694db6e13457c7cf8d0e4c9c https://www.encodeproject.org/files/ENCFF209ILW/@@download/ENCFF209ILW.bigWig hg19 released low read depth biological replicates with identical biosample ENCFF950JTT bed narrowPeak conservative idr thresholded peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF215YYW, ENCFF383XWW, ENCFF772HIT 390107 ENCODE Processing Pipeline 2cbb71e35123474141876f2d96fd7e7c https://www.encodeproject.org/files/ENCFF950JTT/@@download/ENCFF950JTT.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF088WYS bed narrowPeak optimal idr thresholded peaks ENCSR000BSA ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF215YYW, ENCFF383XWW, ENCFF772HIT 429111 ENCODE Processing Pipeline 552adbf4f3cb71bf7ca90692e963e8df https://www.encodeproject.org/files/ENCFF088WYS/@@download/ENCFF088WYS.bed.gz hg19 released low read depth biological replicates with identical biosample ENCFF281EIK fastq reads ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1830816994 Richard Myers, HAIB a0bba3596cb1f01c19a60f39b810ecff SRA:SRR5331221 https://www.encodeproject.org/files/ENCFF281EIK/@@download/ENCFF281EIK.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption, low read depth ENCFF183QKB fastq reads ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1266098192 Richard Myers, HAIB 328fef045a5fb348b2404f71b276443f SRA:SRR5331220 https://www.encodeproject.org/files/ENCFF183QKB/@@download/ENCFF183QKB.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released antibody characterized with exemption, low read depth ENCFF146TUI bam unfiltered alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF281EIK, ENCFF807MUK 1901604022 ENCODE Processing Pipeline abced924799343ff1164a7bad5c0b64a https://www.encodeproject.org/files/ENCFF146TUI/@@download/ENCFF146TUI.bam hg19 released antibody characterized with exemption, low read depth ENCFF147ZCC bam unfiltered alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF183QKB, ENCFF807MUK 1329356935 ENCODE Processing Pipeline 29ec9c62f41f16085fc56bfd7ac039a2 https://www.encodeproject.org/files/ENCFF147ZCC/@@download/ENCFF147ZCC.bam hg19 released antibody characterized with exemption, low read depth ENCFF578BYK bam unfiltered alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF281EIK, ENCFF643CGH 1904971605 ENCODE Processing Pipeline e45c1df92ad7e1f3d903ded9de7f0e4f https://www.encodeproject.org/files/ENCFF578BYK/@@download/ENCFF578BYK.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF358BPA bam unfiltered alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF183QKB, ENCFF643CGH 1331506326 ENCODE Processing Pipeline c7c11a07ff46a605bfcc42f62e99f6eb https://www.encodeproject.org/files/ENCFF358BPA/@@download/ENCFF358BPA.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF115VTJ bam alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF183QKB, ENCFF807MUK 970730340 ENCODE Processing Pipeline f1128a5d9508a94affb8eee8d33bc7ac https://www.encodeproject.org/files/ENCFF115VTJ/@@download/ENCFF115VTJ.bam hg19 released antibody characterized with exemption, low read depth ENCFF363YKW bam alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF183QKB, ENCFF643CGH 970248899 ENCODE Processing Pipeline c14853318a55d2b3eb71326faad9076f https://www.encodeproject.org/files/ENCFF363YKW/@@download/ENCFF363YKW.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF131HAH bam alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF281EIK, ENCFF807MUK 1376328635 ENCODE Processing Pipeline 7be3e1f3ec3d7673c1b8a5a150cf21d8 https://www.encodeproject.org/files/ENCFF131HAH/@@download/ENCFF131HAH.bam hg19 released antibody characterized with exemption, low read depth ENCFF473NMO bam alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF281EIK, ENCFF643CGH 1375839326 ENCODE Processing Pipeline 89582cb16309704f069e342171333ee9 https://www.encodeproject.org/files/ENCFF473NMO/@@download/ENCFF473NMO.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF247NLO bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF473NMO, ENCFF709XAA 984751689 ENCODE Processing Pipeline b57b18489ba985edee6ef679521455b5 https://www.encodeproject.org/files/ENCFF247NLO/@@download/ENCFF247NLO.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF265CJN bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF363YKW, ENCFF709XAA 979793261 ENCODE Processing Pipeline 912ec8e1614fa74f99689337f3c0f588 https://www.encodeproject.org/files/ENCFF265CJN/@@download/ENCFF265CJN.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF626OOO bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF332SVJ, ENCFF363YKW, ENCFF473NMO, ENCFF709XAA 1345516850 ENCODE Processing Pipeline 791388dbb07f0836d8a3e7f50793c9d0 https://www.encodeproject.org/files/ENCFF626OOO/@@download/ENCFF626OOO.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF650VEE bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF473NMO, ENCFF709XAA 802579304 ENCODE Processing Pipeline 208c2b63f23741794eb60314298f9af5 https://www.encodeproject.org/files/ENCFF650VEE/@@download/ENCFF650VEE.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF623AMR bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF363YKW, ENCFF709XAA 642703123 ENCODE Processing Pipeline 507c672fc34ce8b99f040c6c8fbe0498 https://www.encodeproject.org/files/ENCFF623AMR/@@download/ENCFF623AMR.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF900REU bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF332SVJ, ENCFF363YKW, ENCFF473NMO, ENCFF709XAA 1098954451 ENCODE Processing Pipeline 93e5728248a3954d5df862e40c26ab93 https://www.encodeproject.org/files/ENCFF900REU/@@download/ENCFF900REU.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF294TKX bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF473NMO, ENCFF709XAA 6352302 ENCODE Processing Pipeline 851854e5e9bb7bc05487becd854a6b2c https://www.encodeproject.org/files/ENCFF294TKX/@@download/ENCFF294TKX.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF602FXU bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF332SVJ, ENCFF363YKW, ENCFF473NMO, ENCFF709XAA 6784191 ENCODE Processing Pipeline d65fbbf671a3926934d8d08cf7107f5a https://www.encodeproject.org/files/ENCFF602FXU/@@download/ENCFF602FXU.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF770PCN bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF675MHT 13207837 ENCODE Processing Pipeline 598e1de8f198050fdad052bd0bf5877a https://www.encodeproject.org/files/ENCFF770PCN/@@download/ENCFF770PCN.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF675MHT bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF363YKW, ENCFF709XAA 5863045 ENCODE Processing Pipeline 3f4ef3f530fc925a034c676165edf98c https://www.encodeproject.org/files/ENCFF675MHT/@@download/ENCFF675MHT.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF159OAX bed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF294TKX, ENCFF419RSJ, ENCFF602FXU, ENCFF675MHT 634458 ENCODE Processing Pipeline 5704bd78e270ce39640de3e4936a4be4 https://www.encodeproject.org/files/ENCFF159OAX/@@download/ENCFF159OAX.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF669JCI bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF294TKX 13536862 ENCODE Processing Pipeline 78db40a2f3561436c7d2ca0777501578 https://www.encodeproject.org/files/ENCFF669JCI/@@download/ENCFF669JCI.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF574NOK bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF602FXU 13511408 ENCODE Processing Pipeline 16ea735698646eb2c5ae6a3741c1d712 https://www.encodeproject.org/files/ENCFF574NOK/@@download/ENCFF574NOK.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF015DBZ bigBed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF159OAX 1312121 ENCODE Processing Pipeline 3420e411478ca38436165f2a926e7e2c https://www.encodeproject.org/files/ENCFF015DBZ/@@download/ENCFF015DBZ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF021XJN bed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF294TKX, ENCFF419RSJ, ENCFF602FXU, ENCFF675MHT 663445 ENCODE Processing Pipeline 2cc7dab80c84f9a442997a58288842c1 https://www.encodeproject.org/files/ENCFF021XJN/@@download/ENCFF021XJN.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF866FMO bigBed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF021XJN 1357233 ENCODE Processing Pipeline 91736d7452b7010e1af551b6d80687da https://www.encodeproject.org/files/ENCFF866FMO/@@download/ENCFF866FMO.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF186BPW bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF131HAH 1221320833 ENCODE Processing Pipeline f7bb505ae02936ce77c0be886a563f4f https://www.encodeproject.org/files/ENCFF186BPW/@@download/ENCFF186BPW.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF938RHP bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ 980576099 ENCODE Processing Pipeline 3b1375d518a0062082fc527b5e2410e1 https://www.encodeproject.org/files/ENCFF938RHP/@@download/ENCFF938RHP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF208SUL bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ 643260670 ENCODE Processing Pipeline ed0764fa50e4c698fb59aec94bb55545 https://www.encodeproject.org/files/ENCFF208SUL/@@download/ENCFF208SUL.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF968CBF bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ, ENCFF131HAH 1304623932 ENCODE Processing Pipeline e8f085e2f09212a4eaa8746a026f1790 https://www.encodeproject.org/files/ENCFF968CBF/@@download/ENCFF968CBF.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF944LXO bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF131HAH 817915990 ENCODE Processing Pipeline 60e00b18e3e0b855a52643559ba716ba https://www.encodeproject.org/files/ENCFF944LXO/@@download/ENCFF944LXO.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF026KYB bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ, ENCFF131HAH 1103679483 ENCODE Processing Pipeline 895764d5734f33a240e61f45c625c358 https://www.encodeproject.org/files/ENCFF026KYB/@@download/ENCFF026KYB.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF045SMN bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF131HAH 6212068 ENCODE Processing Pipeline 4d303f0bcffe18274deecf13520dfd59 https://www.encodeproject.org/files/ENCFF045SMN/@@download/ENCFF045SMN.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF535IGN bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF045SMN 13362640 ENCODE Processing Pipeline 7f9da50d68843e0a736cb6c6dd7c8ab8 https://www.encodeproject.org/files/ENCFF535IGN/@@download/ENCFF535IGN.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF917CTE bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF477IXW 13379195 ENCODE Processing Pipeline 436f5f45c4aff8b9959d0fb5da748bce https://www.encodeproject.org/files/ENCFF917CTE/@@download/ENCFF917CTE.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF357OAA bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ 5760292 ENCODE Processing Pipeline 57cd23fbb6807ef1926017cdddb8efac https://www.encodeproject.org/files/ENCFF357OAA/@@download/ENCFF357OAA.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF477IXW bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ, ENCFF131HAH 6680945 ENCODE Processing Pipeline f5b14472ec98f963c35d668b3636b252 https://www.encodeproject.org/files/ENCFF477IXW/@@download/ENCFF477IXW.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF744NXL bed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF045SMN, ENCFF357OAA, ENCFF477IXW 604775 ENCODE Processing Pipeline ca800c0284be134f57aaacdd0316c355 https://www.encodeproject.org/files/ENCFF744NXL/@@download/ENCFF744NXL.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF948TXN bed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF045SMN, ENCFF357OAA, ENCFF477IXW 627991 ENCODE Processing Pipeline faf8f9d6ef509ef17dd410cd21d30238 https://www.encodeproject.org/files/ENCFF948TXN/@@download/ENCFF948TXN.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF081BXU bigBed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF948TXN 1030546 ENCODE Processing Pipeline fb4d029fc0dc065266e578a0104d8b5a https://www.encodeproject.org/files/ENCFF081BXU/@@download/ENCFF081BXU.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF155WMI bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF357OAA 10911974 ENCODE Processing Pipeline 25eba44272ae8d14274a0cb5981a34c2 https://www.encodeproject.org/files/ENCFF155WMI/@@download/ENCFF155WMI.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF490TSP bigBed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF744NXL 999634 ENCODE Processing Pipeline 4e7b83661300dc056c91cf7f37f35640 https://www.encodeproject.org/files/ENCFF490TSP/@@download/ENCFF490TSP.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF000NZI bam alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NZS 690577483 Richard Myers, HAIB badfe049f18e1b3446543f7f43f50929 https://www.encodeproject.org/files/ENCFF000NZI/@@download/ENCFF000NZI.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NZJ bigBed broadPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TYA 581977 Richard Myers, HAIB d61a088aef4fd259f6960148fb650b18 https://www.encodeproject.org/files/ENCFF000NZJ/@@download/ENCFF000NZJ.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NZK bigBed broadPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TYB 1014675 Richard Myers, HAIB bad613532a0d931eaa6e7dc6e150384a https://www.encodeproject.org/files/ENCFF000NZK/@@download/ENCFF000NZK.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NZL bam alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NZX 1228881878 Richard Myers, HAIB 5802de19006c59d71540a184a06b52ac https://www.encodeproject.org/files/ENCFF000NZL/@@download/ENCFF000NZL.bam hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NZM bigWig raw signal ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 1 14355265 Richard Myers, HAIB 842ffe2b45f53654a4cf4ef3d049cd67 https://www.encodeproject.org/files/ENCFF000NZM/@@download/ENCFF000NZM.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NZN bigWig raw signal ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 1 37938613 Richard Myers, HAIB 70513f456e0c4e25ab4badc30c7443ec https://www.encodeproject.org/files/ENCFF000NZN/@@download/ENCFF000NZN.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NZS fastq reads ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1116127923 Richard Myers, HAIB f06824992b7e971a0c64711220a190cb https://www.encodeproject.org/files/ENCFF000NZS/@@download/ENCFF000NZS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCS/ released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NZX fastq reads ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1438184764 Richard Myers, HAIB b88b073fe53acccf8e67693c9c8beb65 https://www.encodeproject.org/files/ENCFF000NZX/@@download/ENCFF000NZX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF001TYA bed broadPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 1 313249 Richard Myers, HAIB 175e3d4fe8bd5c393065a13fad5adb61 https://www.encodeproject.org/files/ENCFF001TYA/@@download/ENCFF001TYA.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001TYB bed broadPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 1 571633 Richard Myers, HAIB 68e59b97368344535065ee6e9469c90b https://www.encodeproject.org/files/ENCFF001TYB/@@download/ENCFF001TYB.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CHK bed narrowPeak optimal idr thresholded peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 383139 ENCODE Consortium Analysis Working Group bc78187f95b7ecfb2d41029a2b41319d https://www.encodeproject.org/files/ENCFF002CHK/@@download/ENCFF002CHK.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF957ZYT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE ENCFF002CHK 854332 ENCODE Consortium 6df8f004671a30394a872fb7d82b2c7f https://www.encodeproject.org/files/ENCFF957ZYT/@@download/ENCFF957ZYT.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF857OQO bam unfiltered alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZS, ENCFF643CGH 1337442434 ENCODE Processing Pipeline bedeb0426d2329b280693d2cf06ce49e https://www.encodeproject.org/files/ENCFF857OQO/@@download/ENCFF857OQO.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF614SHU bam alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZS, ENCFF643CGH 477999391 ENCODE Processing Pipeline 8abd6f677c6103e06df480f379e31b18 https://www.encodeproject.org/files/ENCFF614SHU/@@download/ENCFF614SHU.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF406HIQ bam unfiltered alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZX, ENCFF643CGH 1819559868 ENCODE Processing Pipeline b0a1803e73142757ffc6413e3bc44d42 https://www.encodeproject.org/files/ENCFF406HIQ/@@download/ENCFF406HIQ.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF475VQL bam alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZX, ENCFF643CGH 935790985 ENCODE Processing Pipeline df19eeb9088288e455d4947a29b5289e https://www.encodeproject.org/files/ENCFF475VQL/@@download/ENCFF475VQL.bam GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF051KDT bam unfiltered alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZS, ENCFF807MUK 1333855214 ENCODE Processing Pipeline ed510d11bbe769f5ccb3d5540500f806 https://www.encodeproject.org/files/ENCFF051KDT/@@download/ENCFF051KDT.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF228QWW bam alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZS, ENCFF807MUK 477534235 ENCODE Processing Pipeline b14b448d35f78fa3280b5eafd27cb0ee https://www.encodeproject.org/files/ENCFF228QWW/@@download/ENCFF228QWW.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF216EUF bam alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZX, ENCFF807MUK 929244003 ENCODE Processing Pipeline 4ccb9c5ab55377e50c6467c661aef965 https://www.encodeproject.org/files/ENCFF216EUF/@@download/ENCFF216EUF.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF498EOO bam unfiltered alignments ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZX, ENCFF807MUK 1814545700 ENCODE Processing Pipeline da91f57475239afdb48ae76f1bea91b6 https://www.encodeproject.org/files/ENCFF498EOO/@@download/ENCFF498EOO.bam hg19 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF446FQC bigWig fold change over control ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF100EIH, ENCFF562HPN, ENCFF614SHU 252135596 ENCODE Processing Pipeline 5112bfeb6c7c96f87dde6744c897691f https://www.encodeproject.org/files/ENCFF446FQC/@@download/ENCFF446FQC.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF837TKO bigWig signal p-value ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF100EIH, ENCFF562HPN, ENCFF614SHU 510543387 ENCODE Processing Pipeline fa427e71891497d7e7cf94d71a6e550a https://www.encodeproject.org/files/ENCFF837TKO/@@download/ENCFF837TKO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF358KNT bigWig fold change over control ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF475VQL, ENCFF562HPN 487138939 ENCODE Processing Pipeline 78eabfc72761db984ac7f5be38382a3e https://www.encodeproject.org/files/ENCFF358KNT/@@download/ENCFF358KNT.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF889FZO bigWig signal p-value ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF475VQL, ENCFF562HPN 549442335 ENCODE Processing Pipeline e3bb1b9dfebaeabec2de738ae907af99 https://www.encodeproject.org/files/ENCFF889FZO/@@download/ENCFF889FZO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF926EPQ bigWig signal p-value ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100EIH, ENCFF475VQL, ENCFF562HPN, ENCFF614SHU 731823797 ENCODE Processing Pipeline cf054f5d9306600e807602949784ef1a https://www.encodeproject.org/files/ENCFF926EPQ/@@download/ENCFF926EPQ.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF631BGT bigBed narrowPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF322OFP 8943892 ENCODE Processing Pipeline 8cc5d98d66f11d544e2361f62d8a30e0 https://www.encodeproject.org/files/ENCFF631BGT/@@download/ENCFF631BGT.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF322OFP bed narrowPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF100EIH, ENCFF562HPN, ENCFF614SHU 3843589 ENCODE Processing Pipeline faf3ed090f1efdb117bcab54a33dde81 https://www.encodeproject.org/files/ENCFF322OFP/@@download/ENCFF322OFP.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF745IWV bed narrowPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100EIH, ENCFF475VQL, ENCFF562HPN 5623493 ENCODE Processing Pipeline 69aeee6d2cbd908e3698c93460beac56 https://www.encodeproject.org/files/ENCFF745IWV/@@download/ENCFF745IWV.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF851GCH bigWig fold change over control ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100EIH, ENCFF475VQL, ENCFF562HPN, ENCFF614SHU 635730648 ENCODE Processing Pipeline e2398aa2af3123ec6b12b721f34c7dd3 https://www.encodeproject.org/files/ENCFF851GCH/@@download/ENCFF851GCH.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF041UZM bed narrowPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100EIH, ENCFF475VQL, ENCFF562HPN, ENCFF614SHU 5797560 ENCODE Processing Pipeline cacf57dff2b18ae6e5515aa194a035df https://www.encodeproject.org/files/ENCFF041UZM/@@download/ENCFF041UZM.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF946SAG bed narrowPeak optimal idr thresholded peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041UZM, ENCFF322OFP, ENCFF419RSJ, ENCFF745IWV 384608 ENCODE Processing Pipeline 2e7c73324c812bc0506c159899d6f263 https://www.encodeproject.org/files/ENCFF946SAG/@@download/ENCFF946SAG.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF538DWL bigBed narrowPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041UZM 13236941 ENCODE Processing Pipeline 433274a71935eb3c4855adc12cf24cfa https://www.encodeproject.org/files/ENCFF538DWL/@@download/ENCFF538DWL.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF659FRU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF946SAG 682173 ENCODE Processing Pipeline 7645fd4b1c0d3da4740a3f69e6ab8aae https://www.encodeproject.org/files/ENCFF659FRU/@@download/ENCFF659FRU.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF259SNF bed narrowPeak conservative idr thresholded peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF041UZM, ENCFF322OFP, ENCFF419RSJ, ENCFF745IWV 324899 ENCODE Processing Pipeline 18a5d138409bf6b5643a5a9b788d4b45 https://www.encodeproject.org/files/ENCFF259SNF/@@download/ENCFF259SNF.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF990NTO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF259SNF 604538 ENCODE Processing Pipeline d10e6f9598b276ad6208b3c50dba354b https://www.encodeproject.org/files/ENCFF990NTO/@@download/ENCFF990NTO.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF791MAK bigBed narrowPeak peaks ENCSR000BHJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens PAX5-human ENCAB000AJT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF745IWV 13283988 ENCODE Processing Pipeline 07e4915a5970af439672ca02eb256174 https://www.encodeproject.org/files/ENCFF791MAK/@@download/ENCFF791MAK.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NXU bigBed broadPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TXQ 1167589 Richard Myers, HAIB 8c504fde2a46648368334f8ec1a18206 https://www.encodeproject.org/files/ENCFF000NXU/@@download/ENCFF000NXU.bigBed hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NXV bigBed broadPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TXR 514330 Richard Myers, HAIB e383556a449513de50ca719bbc4f0dac https://www.encodeproject.org/files/ENCFF000NXV/@@download/ENCFF000NXV.bigBed hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NXX bam alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NYH 1344274115 Richard Myers, HAIB b93c5562a0003c243b12f24931f39a0c https://www.encodeproject.org/files/ENCFF000NXX/@@download/ENCFF000NXX.bam hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NXY bam alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NYJ 1109705455 Richard Myers, HAIB c1a6a32546e91353bb6a9e8a87fe8c22 https://www.encodeproject.org/files/ENCFF000NXY/@@download/ENCFF000NXY.bam hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NXZ bigWig raw signal ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 1 49013415 Richard Myers, HAIB 97226b08836caad5ca589fc01ec1b4e9 https://www.encodeproject.org/files/ENCFF000NXZ/@@download/ENCFF000NXZ.bigWig hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NYA bigWig raw signal ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 1 22959401 Richard Myers, HAIB 4cd1c52da61578475888667af6bdaf05 https://www.encodeproject.org/files/ENCFF000NYA/@@download/ENCFF000NYA.bigWig hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NYH fastq reads ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1355323085 Richard Myers, HAIB 171808fc7101394bf88c7bcdab75afe2 https://www.encodeproject.org/files/ENCFF000NYH/@@download/ENCFF000NYH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NYJ fastq reads ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1114007550 Richard Myers, HAIB f202c66e4d37eb4d127adfb0e9a5b122 https://www.encodeproject.org/files/ENCFF000NYJ/@@download/ENCFF000NYJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TXQ bed broadPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 1 712158 Richard Myers, HAIB b78104558c7fba920533144a3277e9f7 https://www.encodeproject.org/files/ENCFF001TXQ/@@download/ENCFF001TXQ.bed.gz hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TXR bed broadPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 1 323300 Richard Myers, HAIB 9cb04a083f8ab6c7715d3ad5081eb1a0 https://www.encodeproject.org/files/ENCFF001TXR/@@download/ENCFF001TXR.bed.gz hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CHG bed narrowPeak optimal idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 608424 ENCODE Consortium Analysis Working Group b8df4bad5bad9f8745dfe10c49735213 https://www.encodeproject.org/files/ENCFF002CHG/@@download/ENCFF002CHG.bed.gz hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF987FTR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE ENCFF002CHG 1405898 ENCODE Consortium c041bf48c0fac52e24f8bc05a0c17765 https://www.encodeproject.org/files/ENCFF987FTR/@@download/ENCFF987FTR.bigBed hg19 archived moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF512SGQ bam unfiltered alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NYJ, ENCFF643CGH 1179740104 ENCODE Processing Pipeline 278a980d8c2e88c0bb188d27d4ff8b71 https://www.encodeproject.org/files/ENCFF512SGQ/@@download/ENCFF512SGQ.bam GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF261PTK bam alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NYJ, ENCFF643CGH 675205759 ENCODE Processing Pipeline 7e569bbf7a4cd3fd41c5667dabe68a4f https://www.encodeproject.org/files/ENCFF261PTK/@@download/ENCFF261PTK.bam GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF377QYQ bam unfiltered alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYH, ENCFF643CGH 1452858802 ENCODE Processing Pipeline 6ddc6a05369289bc68bf031d15098c2f https://www.encodeproject.org/files/ENCFF377QYQ/@@download/ENCFF377QYQ.bam GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF838XZA bam alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYH, ENCFF643CGH 808765999 ENCODE Processing Pipeline 28ef492d202566e22ae62ed0fa6c40b9 https://www.encodeproject.org/files/ENCFF838XZA/@@download/ENCFF838XZA.bam GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF219MMF bam unfiltered alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NYJ, ENCFF807MUK 1178403357 ENCODE Processing Pipeline c14031e60e131ecf07b24f89c51ac462 https://www.encodeproject.org/files/ENCFF219MMF/@@download/ENCFF219MMF.bam hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF617HLC bam alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NYJ, ENCFF807MUK 669300965 ENCODE Processing Pipeline c142a6b687b30b71c766bef10c1a6c71 https://www.encodeproject.org/files/ENCFF617HLC/@@download/ENCFF617HLC.bam hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF041PWP bam unfiltered alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYH, ENCFF807MUK 1450675432 ENCODE Processing Pipeline caa573f2bd0f82dff5bfc4c3a661f0f9 https://www.encodeproject.org/files/ENCFF041PWP/@@download/ENCFF041PWP.bam hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF930KIJ bam alignments ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NYH, ENCFF807MUK 802797569 ENCODE Processing Pipeline d8ee1d883fa258a566b0e474ef40b1a3 https://www.encodeproject.org/files/ENCFF930KIJ/@@download/ENCFF930KIJ.bam hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF363OIP bigWig signal p-value ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF537DAJ, ENCFF838XZA 576939838 ENCODE Processing Pipeline db24978c673c54b8135dfcd386915f63 https://www.encodeproject.org/files/ENCFF363OIP/@@download/ENCFF363OIP.bigWig GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF572LIQ bigWig fold change over control ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF537DAJ, ENCFF838XZA 459992186 ENCODE Processing Pipeline 8b0e934117e81748bc884ed66155cc79 https://www.encodeproject.org/files/ENCFF572LIQ/@@download/ENCFF572LIQ.bigWig GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF985ZWZ bigBed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF790YIS 12930877 ENCODE Processing Pipeline d13ca1bbe74bdebf6eee07486cc564fa https://www.encodeproject.org/files/ENCFF985ZWZ/@@download/ENCFF985ZWZ.bigBed GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF184AGP bigWig signal p-value ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF261PTK, ENCFF537DAJ, ENCFF838XZA 828934832 ENCODE Processing Pipeline 7d4384ce9dec77750f5a63f79daae2ab https://www.encodeproject.org/files/ENCFF184AGP/@@download/ENCFF184AGP.bigWig GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF196QMQ bed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF537DAJ, ENCFF838XZA 6831187 ENCODE Processing Pipeline f60d9827a245929fac12837869cd7726 https://www.encodeproject.org/files/ENCFF196QMQ/@@download/ENCFF196QMQ.bed.gz GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF830EBQ bed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF261PTK, ENCFF537DAJ, ENCFF838XZA 6981320 ENCODE Processing Pipeline 2325199fad8acb7dc70471c5d62521ba https://www.encodeproject.org/files/ENCFF830EBQ/@@download/ENCFF830EBQ.bed.gz GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF646JVP bed narrowPeak conservative idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF196QMQ, ENCFF419RSJ, ENCFF790YIS, ENCFF830EBQ 552690 ENCODE Processing Pipeline f325e7b649e35e6758d56fc0217ded02 https://www.encodeproject.org/files/ENCFF646JVP/@@download/ENCFF646JVP.bed.gz GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF376ITC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF646JVP 1229162 ENCODE Processing Pipeline 94949cafb55e9daf5f76c726dead63d1 https://www.encodeproject.org/files/ENCFF376ITC/@@download/ENCFF376ITC.bigBed GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF191FOS bigWig fold change over control ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF261PTK, ENCFF537DAJ 441901058 ENCODE Processing Pipeline 4c4634d3abbe0f7966bcada754b11f7c https://www.encodeproject.org/files/ENCFF191FOS/@@download/ENCFF191FOS.bigWig GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF388KAP bigWig fold change over control ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF261PTK, ENCFF537DAJ, ENCFF838XZA 721754804 ENCODE Processing Pipeline dc70e14f076ba0b5a2358cecbdb8acbf https://www.encodeproject.org/files/ENCFF388KAP/@@download/ENCFF388KAP.bigWig GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF974GZJ bigWig signal p-value ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF261PTK, ENCFF537DAJ 504167814 ENCODE Processing Pipeline 5179d344998b9ce34ca2b879583dd2d0 https://www.encodeproject.org/files/ENCFF974GZJ/@@download/ENCFF974GZJ.bigWig GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF941CTI bigBed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF196QMQ 12688845 ENCODE Processing Pipeline fe08b25892f767b1d2daf84d60bbd8e2 https://www.encodeproject.org/files/ENCFF941CTI/@@download/ENCFF941CTI.bigBed GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF819MMG bigBed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF830EBQ 12657780 ENCODE Processing Pipeline b57d3cd098fc68775412a2351bff0d4c https://www.encodeproject.org/files/ENCFF819MMG/@@download/ENCFF819MMG.bigBed GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF480WDX bed narrowPeak optimal idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF196QMQ, ENCFF419RSJ, ENCFF790YIS, ENCFF830EBQ 669412 ENCODE Processing Pipeline becbcfef50d627dc9fb4a9bbf5c8a890 https://www.encodeproject.org/files/ENCFF480WDX/@@download/ENCFF480WDX.bed.gz GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF074ZXN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF480WDX 1436563 ENCODE Processing Pipeline b7351f41395c50c3b832cd8335113565 https://www.encodeproject.org/files/ENCFF074ZXN/@@download/ENCFF074ZXN.bigBed GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF790YIS bed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF261PTK, ENCFF537DAJ 6363409 ENCODE Processing Pipeline 27cf39f20b496402c93629cb0ed10c42 https://www.encodeproject.org/files/ENCFF790YIS/@@download/ENCFF790YIS.bed.gz GRCh38 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF559GVL bigWig fold change over control ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF508HCX, ENCFF930KIJ 448013018 ENCODE Processing Pipeline d4d35a3455a086d6cc4e9828acd0d03b https://www.encodeproject.org/files/ENCFF559GVL/@@download/ENCFF559GVL.bigWig hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF676IPZ bigWig signal p-value ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF508HCX, ENCFF930KIJ 612392548 ENCODE Processing Pipeline 8f87e05574f77a855dbbade9a8605810 https://www.encodeproject.org/files/ENCFF676IPZ/@@download/ENCFF676IPZ.bigWig hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF669FMA bigWig signal p-value ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF508HCX, ENCFF617HLC 574008239 ENCODE Processing Pipeline c427cbac3d7b7d99959be5882150dad1 https://www.encodeproject.org/files/ENCFF669FMA/@@download/ENCFF669FMA.bigWig hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF197OZH bigWig signal p-value ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF508HCX, ENCFF617HLC, ENCFF930KIJ 752732983 ENCODE Processing Pipeline 86e006177477509ecdfc9194663c0752 https://www.encodeproject.org/files/ENCFF197OZH/@@download/ENCFF197OZH.bigWig hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF574ATX bigWig fold change over control ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF508HCX, ENCFF617HLC 453802498 ENCODE Processing Pipeline a443c6dcceab594abf40ae288abe5e19 https://www.encodeproject.org/files/ENCFF574ATX/@@download/ENCFF574ATX.bigWig hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF996TKN bigWig fold change over control ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF508HCX, ENCFF617HLC, ENCFF930KIJ 720805882 ENCODE Processing Pipeline 24e31600c2d1ec12ab09f6022c2fbcd3 https://www.encodeproject.org/files/ENCFF996TKN/@@download/ENCFF996TKN.bigWig hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF729EFK bed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF508HCX, ENCFF617HLC, ENCFF930KIJ 6856843 ENCODE Processing Pipeline 5a08f73adafc396d36ff42aa76addf1b https://www.encodeproject.org/files/ENCFF729EFK/@@download/ENCFF729EFK.bed.gz hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF806NEN bed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF508HCX, ENCFF617HLC 6261010 ENCODE Processing Pipeline b12b3a898aaae73f6bae267d89c05c62 https://www.encodeproject.org/files/ENCFF806NEN/@@download/ENCFF806NEN.bed.gz hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF019FNI bed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF508HCX, ENCFF930KIJ 6488664 ENCODE Processing Pipeline f4ce1c0a9218c31ee5091bc8bf3803fc https://www.encodeproject.org/files/ENCFF019FNI/@@download/ENCFF019FNI.bed.gz hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF087BVG bigBed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF729EFK 12565587 ENCODE Processing Pipeline 4709571d8ed1113d56dea248b669eca3 https://www.encodeproject.org/files/ENCFF087BVG/@@download/ENCFF087BVG.bigBed hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF598MIG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF269LZJ 1012457 ENCODE Processing Pipeline 7b1de4935c051b1bbd2bd01ecd55a50d https://www.encodeproject.org/files/ENCFF598MIG/@@download/ENCFF598MIG.bigBed hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF628QJU bed narrowPeak optimal idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF019FNI, ENCFF729EFK, ENCFF806NEN 640810 ENCODE Processing Pipeline dc9ce027a41e9f4547f9aa222c71c62c https://www.encodeproject.org/files/ENCFF628QJU/@@download/ENCFF628QJU.bed.gz hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF027YFF bigBed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1 ENCFF019FNI 12282263 ENCODE Processing Pipeline 1dc1f26e5fbc8d2c6442a5cb1da4e15a https://www.encodeproject.org/files/ENCFF027YFF/@@download/ENCFF027YFF.bigBed hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF787RNR bigBed narrowPeak peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 2 ENCFF806NEN 12901994 ENCODE Processing Pipeline e891b219ed4c73b0826c9f3ce42e6722 https://www.encodeproject.org/files/ENCFF787RNR/@@download/ENCFF787RNR.bigBed hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF269LZJ bed narrowPeak conservative idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF019FNI, ENCFF729EFK, ENCFF806NEN 534232 ENCODE Processing Pipeline 03f7a9c0cdd336f6c026fe75009d6e61 https://www.encodeproject.org/files/ENCFF269LZJ/@@download/ENCFF269LZJ.bed.gz hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF270NLN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRN ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens NFIC-human ENCAB000AJF DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF628QJU 1161707 ENCODE Processing Pipeline a280712855ecd441c5a0545fe0c8d592 https://www.encodeproject.org/files/ENCFF270NLN/@@download/ENCFF270NLN.bigBed hg19 released moderate library complexity, inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000QAX bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QBF 461040459 Richard Myers, HAIB d53c42e03c723ac540e56a5f1193a944 https://www.encodeproject.org/files/ENCFF000QAX/@@download/ENCFF000QAX.bam hg19 archived control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QAY bigBed broadPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKD 541725 Richard Myers, HAIB ed0817ec90e1f65d8144954e4f881773 https://www.encodeproject.org/files/ENCFF000QAY/@@download/ENCFF000QAY.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QAZ bigBed broadPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKE 232106 Richard Myers, HAIB 0d8d77ecebc607dc77ed6a93d70ff9bf https://www.encodeproject.org/files/ENCFF000QAZ/@@download/ENCFF000QAZ.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QBA bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QBN 1362499051 Richard Myers, HAIB f8b51958aa98d32ffda8d3011a314c8e https://www.encodeproject.org/files/ENCFF000QBA/@@download/ENCFF000QBA.bam hg19 archived control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QBB bigWig raw signal ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 13966513 Richard Myers, HAIB 2ed5d2ae3b7739cb1df738f2e836b81f https://www.encodeproject.org/files/ENCFF000QBB/@@download/ENCFF000QBB.bigWig hg19 archived control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QBE bigWig raw signal ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 16553009 Richard Myers, HAIB 07c6c923980f4df1d69bd1aafaabe99e https://www.encodeproject.org/files/ENCFF000QBE/@@download/ENCFF000QBE.bigWig hg19 archived control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QBF fastq reads ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 447759713 Richard Myers, HAIB b3ace8601ce551650564ee7d1108fb6e https://www.encodeproject.org/files/ENCFF000QBF/@@download/ENCFF000QBF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000QBN fastq reads ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1352172692 Richard Myers, HAIB c9a0a87687ad5a1b3bd8f963bfd76aaf https://www.encodeproject.org/files/ENCFF000QBN/@@download/ENCFF000QBN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001UKD bed broadPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 312252 Richard Myers, HAIB 482b6e50d699de0d87427a0233cf77c5 https://www.encodeproject.org/files/ENCFF001UKD/@@download/ENCFF001UKD.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001UKE bed broadPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 91965 Richard Myers, HAIB ac13d7762a01bf2f68690548a8da33ac https://www.encodeproject.org/files/ENCFF001UKE/@@download/ENCFF001UKE.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF002CMB bed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 128678 ENCODE Consortium Analysis Working Group fe645c91ac33d4e3222a007677d53650 https://www.encodeproject.org/files/ENCFF002CMB/@@download/ENCFF002CMB.bed.gz hg19 archived control low read depth, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF231XBJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE ENCFF002CMB 300381 ENCODE Consortium 496ca2695cb7664b36b2857e39da240e https://www.encodeproject.org/files/ENCFF231XBJ/@@download/ENCFF231XBJ.bigBed hg19 archived control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF051OWD bam unfiltered alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBF, ENCFF643CGH 548159008 ENCODE Processing Pipeline 897598389cc9b3aba7a9e2288116e403 https://www.encodeproject.org/files/ENCFF051OWD/@@download/ENCFF051OWD.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF089JIC bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBF, ENCFF643CGH 186470025 ENCODE Processing Pipeline 7c10ea44ed47bb0c47334d1c8bd75412 https://www.encodeproject.org/files/ENCFF089JIC/@@download/ENCFF089JIC.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF329KMX bam unfiltered alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBN, ENCFF643CGH 1747565830 ENCODE Processing Pipeline 022970806714d2c5304f8278a7bcce66 https://www.encodeproject.org/files/ENCFF329KMX/@@download/ENCFF329KMX.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF445ONF bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBN, ENCFF643CGH 929183097 ENCODE Processing Pipeline aea0061108efa217a4245095fc978e5e https://www.encodeproject.org/files/ENCFF445ONF/@@download/ENCFF445ONF.bam GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF522EVL bam unfiltered alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBF, ENCFF807MUK 546854667 ENCODE Processing Pipeline 1733ab6225a74082f202b1a70e8d969f https://www.encodeproject.org/files/ENCFF522EVL/@@download/ENCFF522EVL.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF223OSD bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBF, ENCFF807MUK 186675455 ENCODE Processing Pipeline 716cc41f3ddaa5e4b271843ab07be7d0 https://www.encodeproject.org/files/ENCFF223OSD/@@download/ENCFF223OSD.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF045IHR bam unfiltered alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBN, ENCFF807MUK 1741404837 ENCODE Processing Pipeline dcc2359a3136cb6eab09a2f32915f005 https://www.encodeproject.org/files/ENCFF045IHR/@@download/ENCFF045IHR.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF379XXZ bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBN, ENCFF807MUK 929699971 ENCODE Processing Pipeline 964a9d9f9ffdb00a58498f0dbcd5be60 https://www.encodeproject.org/files/ENCFF379XXZ/@@download/ENCFF379XXZ.bam hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF271TQY bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF089JIC, ENCFF913HVS 342995693 ENCODE Processing Pipeline f687b28509cbac5da346ed64eb3cbbc2 https://www.encodeproject.org/files/ENCFF271TQY/@@download/ENCFF271TQY.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF585CHH bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF445ONF, ENCFF913HVS 468601388 ENCODE Processing Pipeline a5f8f250227b47facd8cd9cfc973c785 https://www.encodeproject.org/files/ENCFF585CHH/@@download/ENCFF585CHH.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF610LSY bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089JIC, ENCFF445ONF, ENCFF913HVS 478026052 ENCODE Processing Pipeline 6d23cb97eb61a74d7616c07778678bc2 https://www.encodeproject.org/files/ENCFF610LSY/@@download/ENCFF610LSY.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF888SDP bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF089JIC, ENCFF913HVS 104124734 ENCODE Processing Pipeline 491770c5d52448c9786fe9568e3c7704 https://www.encodeproject.org/files/ENCFF888SDP/@@download/ENCFF888SDP.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF486GYP bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF445ONF, ENCFF913HVS 402274321 ENCODE Processing Pipeline 2541ca2081557f02836c6e787156dc79 https://www.encodeproject.org/files/ENCFF486GYP/@@download/ENCFF486GYP.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF661GQI bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF855WTK 10919322 ENCODE Processing Pipeline 2bb02ae73bd10c33a8cab61b807c56f2 https://www.encodeproject.org/files/ENCFF661GQI/@@download/ENCFF661GQI.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF190SJX bed narrowPeak conservative idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF549VQK, ENCFF843QGK, ENCFF855WTK 95504 ENCODE Processing Pipeline aee56f6071193cdb13457954e3c5612d https://www.encodeproject.org/files/ENCFF190SJX/@@download/ENCFF190SJX.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF855WTK bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089JIC, ENCFF445ONF, ENCFF913HVS 5089601 ENCODE Processing Pipeline 6b47f982246effb83d4ad78fc9fc45d3 https://www.encodeproject.org/files/ENCFF855WTK/@@download/ENCFF855WTK.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF797HUI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF190SJX 205738 ENCODE Processing Pipeline 53685880700ed765d8873d43d4a16d9f https://www.encodeproject.org/files/ENCFF797HUI/@@download/ENCFF797HUI.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF741IMY bed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF549VQK, ENCFF843QGK, ENCFF855WTK 165026 ENCODE Processing Pipeline 15bb764a113181237eaeb47dc5b28201 https://www.encodeproject.org/files/ENCFF741IMY/@@download/ENCFF741IMY.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF549VQK bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF089JIC, ENCFF913HVS 2721328 ENCODE Processing Pipeline a02132237098f2203b653a5f2fc3d39d https://www.encodeproject.org/files/ENCFF549VQK/@@download/ENCFF549VQK.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF574XDI bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF549VQK 6177009 ENCODE Processing Pipeline 78efa49b57336f5d5dcbc1dd2ed2e8a7 https://www.encodeproject.org/files/ENCFF574XDI/@@download/ENCFF574XDI.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF843QGK bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF445ONF, ENCFF913HVS 4381672 ENCODE Processing Pipeline c77f0375d783c86183330629b0893b20 https://www.encodeproject.org/files/ENCFF843QGK/@@download/ENCFF843QGK.bed.gz GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF333RXK bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF843QGK 10692581 ENCODE Processing Pipeline 2161b9602d88eb1ef6ffd5423f3406e5 https://www.encodeproject.org/files/ENCFF333RXK/@@download/ENCFF333RXK.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF797QCQ bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089JIC, ENCFF445ONF, ENCFF913HVS 467470049 ENCODE Processing Pipeline 04fdcd38eccea40f496387dfab2c9bc6 https://www.encodeproject.org/files/ENCFF797QCQ/@@download/ENCFF797QCQ.bigWig GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF682PLY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF741IMY 350323 ENCODE Processing Pipeline 9cbfa8f95faa970909fc2b00099d365a https://www.encodeproject.org/files/ENCFF682PLY/@@download/ENCFF682PLY.bigBed GRCh38 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF381RFT bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF223OSD, ENCFF701KUD 304981874 ENCODE Processing Pipeline 665d541fe382854b0981a48dfd2acc79 https://www.encodeproject.org/files/ENCFF381RFT/@@download/ENCFF381RFT.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF690AHJ bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF223OSD, ENCFF701KUD 104097676 ENCODE Processing Pipeline d5eb5ae7dc2eb63a94348ea3896aa227 https://www.encodeproject.org/files/ENCFF690AHJ/@@download/ENCFF690AHJ.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF665LTH bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF379XXZ, ENCFF701KUD 468896595 ENCODE Processing Pipeline 1f0e22e836011539d517d502c39924b5 https://www.encodeproject.org/files/ENCFF665LTH/@@download/ENCFF665LTH.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF584FVS bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF223OSD, ENCFF379XXZ, ENCFF701KUD 476887754 ENCODE Processing Pipeline f013f133580827516599a1b357aaa205 https://www.encodeproject.org/files/ENCFF584FVS/@@download/ENCFF584FVS.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF699LAX bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF379XXZ, ENCFF701KUD 402236508 ENCODE Processing Pipeline a0f4b4dcfbc54ec79bebb35da4e64c1d https://www.encodeproject.org/files/ENCFF699LAX/@@download/ENCFF699LAX.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF002SNM bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF223OSD, ENCFF379XXZ, ENCFF701KUD 462900642 ENCODE Processing Pipeline e33fde0d834b5b6f336af6ad8ca0506a https://www.encodeproject.org/files/ENCFF002SNM/@@download/ENCFF002SNM.bigWig hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF735NAF bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF223OSD, ENCFF701KUD 2621077 ENCODE Processing Pipeline 2a64b523b1acf836ce4e073673ed2e2c https://www.encodeproject.org/files/ENCFF735NAF/@@download/ENCFF735NAF.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF336UZW bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF379XXZ, ENCFF701KUD 4384689 ENCODE Processing Pipeline f9bf48178659d146a8e8aa48aae8e4c9 https://www.encodeproject.org/files/ENCFF336UZW/@@download/ENCFF336UZW.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF246ENE bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF223OSD, ENCFF379XXZ, ENCFF701KUD 5090337 ENCODE Processing Pipeline 75f9045a738cef7943860b97401736a8 https://www.encodeproject.org/files/ENCFF246ENE/@@download/ENCFF246ENE.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF062DAE bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF735NAF 5953970 ENCODE Processing Pipeline ab39c0e3e264c2e043609aa135eb595a https://www.encodeproject.org/files/ENCFF062DAE/@@download/ENCFF062DAE.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF897MUT bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF336UZW 10709958 ENCODE Processing Pipeline 84f45fbefa2d511cab22eec31a2fd821 https://www.encodeproject.org/files/ENCFF897MUT/@@download/ENCFF897MUT.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF189ZAI bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF246ENE 10913615 ENCODE Processing Pipeline 59566f2d1ab21c686356562c2766d938 https://www.encodeproject.org/files/ENCFF189ZAI/@@download/ENCFF189ZAI.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF809VBW bed narrowPeak conservative idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF246ENE, ENCFF336UZW, ENCFF735NAF 95577 ENCODE Processing Pipeline 5f2885e39e622a512f5b91b19171ba4d https://www.encodeproject.org/files/ENCFF809VBW/@@download/ENCFF809VBW.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF074FEW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF809VBW 205249 ENCODE Processing Pipeline 4a13b7350a70da7be3515ea1991e42cf https://www.encodeproject.org/files/ENCFF074FEW/@@download/ENCFF074FEW.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF667HLC bed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF246ENE, ENCFF336UZW, ENCFF735NAF 160465 ENCODE Processing Pipeline ee3222ea4ba9e0e28d04252bf3caeb15 https://www.encodeproject.org/files/ENCFF667HLC/@@download/ENCFF667HLC.bed.gz hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF913WUJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF667HLC 343595 ENCODE Processing Pipeline 7e1b320bde50986ab7d3721c722450e0 https://www.encodeproject.org/files/ENCFF913WUJ/@@download/ENCFF913WUJ.bigBed hg19 released control low read depth, low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000NRS bam alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NSE 1478712395 Richard Myers, HAIB 40ef1959e8fff00edfd7fae5ff4e464f https://www.encodeproject.org/files/ENCFF000NRS/@@download/ENCFF000NRS.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NRT bam alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NSG 1558188304 Richard Myers, HAIB 28a42898cb247fa44be5a54f01b3600b https://www.encodeproject.org/files/ENCFF000NRT/@@download/ENCFF000NRT.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NRU bigBed broadPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TWB 985177 Richard Myers, HAIB 4a7b14554242dfbf3dfc4d9e97bba1f8 https://www.encodeproject.org/files/ENCFF000NRU/@@download/ENCFF000NRU.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NRV bigBed broadPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TWC 581798 Richard Myers, HAIB d70b65de5d43da0234713593f0139475 https://www.encodeproject.org/files/ENCFF000NRV/@@download/ENCFF000NRV.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NRW bigWig raw signal ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 1 27511896 Richard Myers, HAIB 2ebfbdd5858399d28339db6d4e993fe7 https://www.encodeproject.org/files/ENCFF000NRW/@@download/ENCFF000NRW.bigWig hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF000NRY bigWig raw signal ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 1 22525504 Richard Myers, HAIB 00f38df47be48ace7d8f047950dbaa81 https://www.encodeproject.org/files/ENCFF000NRY/@@download/ENCFF000NRY.bigWig hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF000NSE fastq reads ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1489076519 Richard Myers, HAIB 63f4f27aec8f104430b804d34ecf73ac https://www.encodeproject.org/files/ENCFF000NSE/@@download/ENCFF000NSE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF000NSG fastq reads ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1540251647 Richard Myers, HAIB 4866c289fa70e483301e527a8cc4c768 https://www.encodeproject.org/files/ENCFF000NSG/@@download/ENCFF000NSG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODV/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF001TWB bed broadPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 1 543464 Richard Myers, HAIB 23c296db0b763b75ed21f16a9a22b78b https://www.encodeproject.org/files/ENCFF001TWB/@@download/ENCFF001TWB.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF001TWC bed broadPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 1 367570 Richard Myers, HAIB e46b31c8f63ef32e90ae45d9f5a8c13e https://www.encodeproject.org/files/ENCFF001TWC/@@download/ENCFF001TWC.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF002CGO bed narrowPeak optimal idr thresholded peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 464879 ENCODE Consortium Analysis Working Group 1c594a9c3fd87caf450bd1216464eb34 https://www.encodeproject.org/files/ENCFF002CGO/@@download/ENCFF002CGO.bed.gz hg19 archived inconsistent platforms, low read length missing derived_from, biological replicates with identical biosample ENCFF944NMB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE ENCFF002CGO 951701 ENCODE Consortium c3af6578e92ab746e599cb41cf183729 https://www.encodeproject.org/files/ENCFF944NMB/@@download/ENCFF944NMB.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF994ZHD bam alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NSG, ENCFF643CGH 1074310346 ENCODE Processing Pipeline a8fa51659f44a13ea021bf995201ae86 https://www.encodeproject.org/files/ENCFF994ZHD/@@download/ENCFF994ZHD.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF125CKC bam unfiltered alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NSG, ENCFF643CGH 1686985344 ENCODE Processing Pipeline b476b8cbc235909657c49f59c7474480 https://www.encodeproject.org/files/ENCFF125CKC/@@download/ENCFF125CKC.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF466MRK bam unfiltered alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NSE, ENCFF643CGH 1592510453 ENCODE Processing Pipeline d6dc0a5dd88c7d7b4df2f84519c3afda https://www.encodeproject.org/files/ENCFF466MRK/@@download/ENCFF466MRK.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF396BCM bam alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NSE, ENCFF643CGH 962132180 ENCODE Processing Pipeline c179a3c2c9095755766891c7c2c2f840 https://www.encodeproject.org/files/ENCFF396BCM/@@download/ENCFF396BCM.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF870CUX bam unfiltered alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NSE, ENCFF807MUK 1590614502 ENCODE Processing Pipeline 4689fd4a222f017e75b5e3ee8d488196 https://www.encodeproject.org/files/ENCFF870CUX/@@download/ENCFF870CUX.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF221PEC bam alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NSE, ENCFF807MUK 954884711 ENCODE Processing Pipeline 46c1bd399708a542e17ee816290147b5 https://www.encodeproject.org/files/ENCFF221PEC/@@download/ENCFF221PEC.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF868WFT bam unfiltered alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NSG, ENCFF807MUK 1686052430 ENCODE Processing Pipeline c0cb9e25c6b39679fc1b85f9108e5cb4 https://www.encodeproject.org/files/ENCFF868WFT/@@download/ENCFF868WFT.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF957MQC bam alignments ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NSG, ENCFF807MUK 1067644656 ENCODE Processing Pipeline 5cdfe5a785f504275beeea240bcdadb2 https://www.encodeproject.org/files/ENCFF957MQC/@@download/ENCFF957MQC.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF027TXI bigWig signal p-value ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 ENCFF396BCM, ENCFF537DAJ 551256867 ENCODE Processing Pipeline 2331377c3a329f7a2db0684ddb20aade https://www.encodeproject.org/files/ENCFF027TXI/@@download/ENCFF027TXI.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF599RJO bigWig signal p-value ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF994ZHD 598220841 ENCODE Processing Pipeline fcb80b86d9190012a125e3a0baa46818 https://www.encodeproject.org/files/ENCFF599RJO/@@download/ENCFF599RJO.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF977SLV bigWig signal p-value ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF396BCM, ENCFF537DAJ, ENCFF994ZHD 857546693 ENCODE Processing Pipeline dca475b6bb1621413473d1c8b414b9eb https://www.encodeproject.org/files/ENCFF977SLV/@@download/ENCFF977SLV.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF412GSP bigWig fold change over control ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 ENCFF396BCM, ENCFF537DAJ 519607483 ENCODE Processing Pipeline 015cf6ee1aaa861be2030ebc1df9bf30 https://www.encodeproject.org/files/ENCFF412GSP/@@download/ENCFF412GSP.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF076MKO bigWig fold change over control ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF994ZHD 616400105 ENCODE Processing Pipeline f32c0ebcbf42ef970f825d92841b362e https://www.encodeproject.org/files/ENCFF076MKO/@@download/ENCFF076MKO.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF485LWD bed narrowPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 ENCFF396BCM, ENCFF537DAJ 6230980 ENCODE Processing Pipeline 720905cff0b320a19debc940e0fa7939 https://www.encodeproject.org/files/ENCFF485LWD/@@download/ENCFF485LWD.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF262RFD bed narrowPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF396BCM, ENCFF537DAJ, ENCFF994ZHD 6860354 ENCODE Processing Pipeline cc30a15a3c0508b51cd31125d21cb18a https://www.encodeproject.org/files/ENCFF262RFD/@@download/ENCFF262RFD.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF405AYX bigBed narrowPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 ENCFF843AOW 12926320 ENCODE Processing Pipeline d4adb3962337c7e8551f80f4b371bd69 https://www.encodeproject.org/files/ENCFF405AYX/@@download/ENCFF405AYX.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF732LDY bigWig fold change over control ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF396BCM, ENCFF537DAJ, ENCFF994ZHD 897902526 ENCODE Processing Pipeline fdc7d50fa3bbda48664280330d7bb383 https://www.encodeproject.org/files/ENCFF732LDY/@@download/ENCFF732LDY.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF843AOW bed narrowPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 2 ENCFF537DAJ, ENCFF994ZHD 6536779 ENCODE Processing Pipeline 10c6e75121fa75557c741eb58a7d7614 https://www.encodeproject.org/files/ENCFF843AOW/@@download/ENCFF843AOW.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF904NHV bigBed narrowPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF262RFD 12828716 ENCODE Processing Pipeline bbe3656d6448928df9e5d3269592e82e https://www.encodeproject.org/files/ENCFF904NHV/@@download/ENCFF904NHV.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF090VQB bigBed narrowPeak peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1 ENCFF485LWD 12905973 ENCODE Processing Pipeline 6cf0fb04a3a27ed996fa3b5f8424d20b https://www.encodeproject.org/files/ENCFF090VQB/@@download/ENCFF090VQB.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF579NXQ bed narrowPeak conservative idr thresholded peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF262RFD, ENCFF419RSJ, ENCFF485LWD, ENCFF843AOW 485441 ENCODE Processing Pipeline 65e1b7946a998e561a558520c0306938 https://www.encodeproject.org/files/ENCFF579NXQ/@@download/ENCFF579NXQ.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF972UWC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF579NXQ 897629 ENCODE Processing Pipeline bba2de8e1b73ba36040937eb7f9ec179 https://www.encodeproject.org/files/ENCFF972UWC/@@download/ENCFF972UWC.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF806KKM bed narrowPeak optimal idr thresholded peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF262RFD, ENCFF419RSJ, ENCFF485LWD, ENCFF843AOW 521189 ENCODE Processing Pipeline 89b042a0e66462ee10bdabd5f2fcada2 https://www.encodeproject.org/files/ENCFF806KKM/@@download/ENCFF806KKM.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF799DFN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQK ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ATF2-human ENCAB000ASU DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF806KKM 952138 ENCODE Processing Pipeline c01817e2f85615c2ce7e8cca36dad7ed https://www.encodeproject.org/files/ENCFF799DFN/@@download/ENCFF799DFN.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QWA bam alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QWN 296756450 Richard Myers, HAIB d3e8c4d2525ac305d88c4bdf5ccbd306 https://www.encodeproject.org/files/ENCFF000QWA/@@download/ENCFF000QWA.bam hg19 archived control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000QWB bigBed broadPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UOT 253581 Richard Myers, HAIB d88e122d18a4a3330ab31a69993a699b https://www.encodeproject.org/files/ENCFF000QWB/@@download/ENCFF000QWB.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000QWC bigBed broadPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UOU 460768 Richard Myers, HAIB 0b997f0062302ea4f02aebc974cbf07c https://www.encodeproject.org/files/ENCFF000QWC/@@download/ENCFF000QWC.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000QWE bam alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QWQ 1827327964 Richard Myers, HAIB 9e482dee8bf6655bd9084caf3379207d https://www.encodeproject.org/files/ENCFF000QWE/@@download/ENCFF000QWE.bam hg19 archived control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000QWF bigWig raw signal ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 2604472 Richard Myers, HAIB b1d31dae243c6bd37aa692aa31d4bc51 https://www.encodeproject.org/files/ENCFF000QWF/@@download/ENCFF000QWF.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000QWG bigWig raw signal ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 23625810 Richard Myers, HAIB ecedc38e133f81fac8d9dfab63914d75 https://www.encodeproject.org/files/ENCFF000QWG/@@download/ENCFF000QWG.bigWig hg19 archived control low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000QWN fastq reads ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 222138222 Richard Myers, HAIB 008b677910ee2e1fe83451241bfc72d8 https://www.encodeproject.org/files/ENCFF000QWN/@@download/ENCFF000QWN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QVY/ released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF000QWQ fastq reads ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1777581289 Richard Myers, HAIB 62b86a47ba4131a7beff5a8927107a25 https://www.encodeproject.org/files/ENCFF000QWQ/@@download/ENCFF000QWQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QVY/ released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF001UOT bed broadPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 138816 Richard Myers, HAIB 928dc8711472d675150549adba56b0b8 https://www.encodeproject.org/files/ENCFF001UOT/@@download/ENCFF001UOT.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UOU bed broadPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 254388 Richard Myers, HAIB cedbf360faa0bfa79c206e505a2fc335 https://www.encodeproject.org/files/ENCFF001UOU/@@download/ENCFF001UOU.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CNG bed narrowPeak optimal idr thresholded peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 156824 ENCODE Consortium Analysis Working Group 66da916867df6e09215a4e5813b94fb9 https://www.encodeproject.org/files/ENCFF002CNG/@@download/ENCFF002CNG.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read length missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF901AOJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE ENCFF002CNG 478131 ENCODE Consortium 0b940549b5802709d40c0e58c6de47d7 https://www.encodeproject.org/files/ENCFF901AOJ/@@download/ENCFF901AOJ.bigBed hg19 archived control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF042UTA bam unfiltered alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QWN, ENCFF643CGH 313823070 ENCODE Processing Pipeline 960688ce049e572f5fe580b0764670f8 https://www.encodeproject.org/files/ENCFF042UTA/@@download/ENCFF042UTA.bam GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF662OCA bam alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QWN, ENCFF643CGH 193231696 ENCODE Processing Pipeline 666bef890e29124999d639b35ccd7e71 https://www.encodeproject.org/files/ENCFF662OCA/@@download/ENCFF662OCA.bam GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF961BAD bam unfiltered alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QWQ, ENCFF643CGH 1994356066 ENCODE Processing Pipeline 768e8eef6934310d741b699db699fedf https://www.encodeproject.org/files/ENCFF961BAD/@@download/ENCFF961BAD.bam GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF608EGH bam alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QWQ, ENCFF643CGH 1368350703 ENCODE Processing Pipeline 8030a0c0863d8565c3c0a17ea5be1420 https://www.encodeproject.org/files/ENCFF608EGH/@@download/ENCFF608EGH.bam GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF741GJT bam alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QWN, ENCFF807MUK 193322961 ENCODE Processing Pipeline 6348049b1599e5d8d7a368e0e8612e46 https://www.encodeproject.org/files/ENCFF741GJT/@@download/ENCFF741GJT.bam hg19 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF109FVN bam unfiltered alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QWN, ENCFF807MUK 313157470 ENCODE Processing Pipeline d5396aa20fd1b89499ce718af3b244ad https://www.encodeproject.org/files/ENCFF109FVN/@@download/ENCFF109FVN.bam hg19 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF085BDG bam unfiltered alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QWQ, ENCFF807MUK 1989938838 ENCODE Processing Pipeline 9ab4e84363f5d5e37aad7a57babb39ac https://www.encodeproject.org/files/ENCFF085BDG/@@download/ENCFF085BDG.bam hg19 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF697SEU bam alignments ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QWQ, ENCFF807MUK 1368908191 ENCODE Processing Pipeline 2c2a31ed1b96db0d6a7f35b31f3dd4e2 https://www.encodeproject.org/files/ENCFF697SEU/@@download/ENCFF697SEU.bam hg19 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF471CGQ bigWig signal p-value ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421EKC, ENCFF608EGH 303701973 ENCODE Processing Pipeline b089f5aa69012eb0e55eb2c248dafefa https://www.encodeproject.org/files/ENCFF471CGQ/@@download/ENCFF471CGQ.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF460MLD bigWig fold change over control ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF421EKC, ENCFF662OCA 96704824 ENCODE Processing Pipeline 042c8511cdd3712b3f897b13e8b1bf53 https://www.encodeproject.org/files/ENCFF460MLD/@@download/ENCFF460MLD.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF410HET bigWig fold change over control ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421EKC, ENCFF608EGH 482817238 ENCODE Processing Pipeline 9069034812c8e2c01883d7cc42ffd015 https://www.encodeproject.org/files/ENCFF410HET/@@download/ENCFF410HET.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF921WIP bed narrowPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF421EKC, ENCFF608EGH, ENCFF662OCA 5697247 ENCODE Processing Pipeline ed0e3572cd49bcad51ccc4f9776d74df https://www.encodeproject.org/files/ENCFF921WIP/@@download/ENCFF921WIP.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF577TJG bed narrowPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF421EKC, ENCFF662OCA 1888187 ENCODE Processing Pipeline 4252e638e8d06fa110b0fd0b48b686ed https://www.encodeproject.org/files/ENCFF577TJG/@@download/ENCFF577TJG.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF839YOZ bigWig signal p-value ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF421EKC, ENCFF662OCA 259339715 ENCODE Processing Pipeline 65a62e9c3c50158fccfb9e01749af613 https://www.encodeproject.org/files/ENCFF839YOZ/@@download/ENCFF839YOZ.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF229TWL bigWig signal p-value ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF421EKC, ENCFF608EGH, ENCFF662OCA 316755820 ENCODE Processing Pipeline 314e9e7d809e1c94d345b8d151e943f7 https://www.encodeproject.org/files/ENCFF229TWL/@@download/ENCFF229TWL.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF320AML bigBed narrowPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF921WIP 13084866 ENCODE Processing Pipeline 22b5b9a92e20e76fd158a48cd4e4bc6c https://www.encodeproject.org/files/ENCFF320AML/@@download/ENCFF320AML.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF991PHN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF213CYP 612677 ENCODE Processing Pipeline f00705dc9cea74b7df812b38232eab44 https://www.encodeproject.org/files/ENCFF991PHN/@@download/ENCFF991PHN.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF660MGV bigBed narrowPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF577TJG 3730785 ENCODE Processing Pipeline 6ad2ec15f0f7c831e27ae007d1a82737 https://www.encodeproject.org/files/ENCFF660MGV/@@download/ENCFF660MGV.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF425MFX bigBed narrowPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF172STQ 13029584 ENCODE Processing Pipeline 4ea8280dd37f090715e73bab618bcce0 https://www.encodeproject.org/files/ENCFF425MFX/@@download/ENCFF425MFX.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF937ONI bigWig fold change over control ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF421EKC, ENCFF608EGH, ENCFF662OCA 550324768 ENCODE Processing Pipeline 3ef1420e55c6e173aeaeb934b98667a4 https://www.encodeproject.org/files/ENCFF937ONI/@@download/ENCFF937ONI.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF172STQ bed narrowPeak peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421EKC, ENCFF608EGH 5492322 ENCODE Processing Pipeline 3bb7881525fd01375d7d8b349ce763c4 https://www.encodeproject.org/files/ENCFF172STQ/@@download/ENCFF172STQ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF886SMI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF735TTP 486254 ENCODE Processing Pipeline a41f899993c50d6c86cd9fcdf18e9880 https://www.encodeproject.org/files/ENCFF886SMI/@@download/ENCFF886SMI.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF735TTP bed narrowPeak conservative idr thresholded peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF172STQ, ENCFF419RSJ, ENCFF577TJG, ENCFF921WIP 208200 ENCODE Processing Pipeline ab08671a6693d093cf52d0dacebd0ef6 https://www.encodeproject.org/files/ENCFF735TTP/@@download/ENCFF735TTP.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF213CYP bed narrowPeak optimal idr thresholded peaks ENCSR000BQN ChIP-seq EFO:0005234 PFSK-1 immortalized cell line child male 22 month Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF172STQ, ENCFF419RSJ, ENCFF577TJG, ENCFF921WIP 282456 ENCODE Processing Pipeline 5c55fa6549f3b1472eeff8eacae37d9a https://www.encodeproject.org/files/ENCFF213CYP/@@download/ENCFF213CYP.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read length biological replicates with identical biosample insufficient read depth ENCFF293WGN fastq reads ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF823QEH 1682171011 Richard Myers, HAIB 3912f8277a536987e668d4dbbee58142 https://www.encodeproject.org/files/ENCFF293WGN/@@download/ENCFF293WGN.fastq.gz HiSeq 2000 /files/ENCFF847SHO/ released antibody characterized with exemption experiment not submitted to GEO ENCFF823QEH fastq reads ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF293WGN 1771440160 Richard Myers, HAIB b9c6bf34dc9cb3c41348ab5a7fabca71 https://www.encodeproject.org/files/ENCFF823QEH/@@download/ENCFF823QEH.fastq.gz HiSeq 2000 /files/ENCFF386SNG/ released antibody characterized with exemption experiment not submitted to GEO ENCFF650FQG bam unfiltered alignments ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF293WGN, ENCFF643CGH, ENCFF823QEH 3656182754 ENCODE Processing Pipeline 99af48d54c2a170a5df359c256c200b9 https://www.encodeproject.org/files/ENCFF650FQG/@@download/ENCFF650FQG.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF728OLR bam unfiltered alignments ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF293WGN, ENCFF807MUK, ENCFF823QEH 3654873698 ENCODE Processing Pipeline 73b3a826bf3c9858d49b855562d8e7f4 https://www.encodeproject.org/files/ENCFF728OLR/@@download/ENCFF728OLR.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF729YXL bam alignments ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF293WGN, ENCFF643CGH, ENCFF823QEH 2277237452 ENCODE Processing Pipeline 0e1eed2c3abe1113e3369912290b3b49 https://www.encodeproject.org/files/ENCFF729YXL/@@download/ENCFF729YXL.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF925ORI bam alignments ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF293WGN, ENCFF807MUK, ENCFF823QEH 2277542530 ENCODE Processing Pipeline 90bb2363e223ee576676dba37f37ef18 https://www.encodeproject.org/files/ENCFF925ORI/@@download/ENCFF925ORI.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF606GLW bed narrowPeak peaks ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF603BPO, ENCFF729YXL 6240780 ENCODE Processing Pipeline 579957e8a721f7391f5d2fc4b51fcaee https://www.encodeproject.org/files/ENCFF606GLW/@@download/ENCFF606GLW.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF490YTS bigBed narrowPeak peaks ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF606GLW 11541537 ENCODE Processing Pipeline 4d64e35dee06ebd0a1c049b3445809fa https://www.encodeproject.org/files/ENCFF490YTS/@@download/ENCFF490YTS.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF171TGQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF265CIX 2516455 ENCODE Processing Pipeline bfa9aca7e91305204ead18e29f2e1f87 https://www.encodeproject.org/files/ENCFF171TGQ/@@download/ENCFF171TGQ.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF192GGA bigWig signal p-value ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF603BPO, ENCFF729YXL 765165977 ENCODE Processing Pipeline 01cf576f307f373ad2ec1068597c9619 https://www.encodeproject.org/files/ENCFF192GGA/@@download/ENCFF192GGA.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF265CIX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF606GLW 1438329 ENCODE Processing Pipeline a60bf5df91d1ad9c425a251acc47ee83 https://www.encodeproject.org/files/ENCFF265CIX/@@download/ENCFF265CIX.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF233LVU bigWig fold change over control ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF603BPO, ENCFF729YXL 332488618 ENCODE Processing Pipeline 8566d4b2ee7206e4d46cdafc3eb4d286 https://www.encodeproject.org/files/ENCFF233LVU/@@download/ENCFF233LVU.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF111CUC bigBed narrowPeak peaks ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF923UEP 11603067 ENCODE Processing Pipeline bb17b083ea8a9ba42427f5664e251f63 https://www.encodeproject.org/files/ENCFF111CUC/@@download/ENCFF111CUC.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF546CLW bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF923UEP 1438552 ENCODE Processing Pipeline fdb68839ec5933ca933e19451e53a689 https://www.encodeproject.org/files/ENCFF546CLW/@@download/ENCFF546CLW.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF923UEP bed narrowPeak peaks ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF831XEP, ENCFF925ORI 6294207 ENCODE Processing Pipeline ea1d9627c056b571326eac2aabd517f0 https://www.encodeproject.org/files/ENCFF923UEP/@@download/ENCFF923UEP.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF709BZI bigWig signal p-value ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF831XEP, ENCFF925ORI 714759165 ENCODE Processing Pipeline 97506e0843f50492109f99436957c299 https://www.encodeproject.org/files/ENCFF709BZI/@@download/ENCFF709BZI.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF245MLE bigWig fold change over control ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF831XEP, ENCFF925ORI 333443980 ENCODE Processing Pipeline 225b3cce90420c7c3f738b108176cbdd https://www.encodeproject.org/files/ENCFF245MLE/@@download/ENCFF245MLE.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF974UMT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR950CUQ ChIP-seq UBERON:0002106 spleen tissue adult male 37 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF546CLW 2514379 ENCODE Processing Pipeline 326971522bbdc6a4007337d767657bfd https://www.encodeproject.org/files/ENCFF974UMT/@@download/ENCFF974UMT.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF339LBU fastq reads ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF349ISG 2003545836 Richard Myers, HAIB ba1a115160bad9b3538cdb7526d21562 SRA:SRR6214206 https://www.encodeproject.org/files/ENCFF339LBU/@@download/ENCFF339LBU.fastq.gz HiSeq 2000 /files/ENCFF215CIJ/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF349ISG fastq reads ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF339LBU 2101060853 Richard Myers, HAIB 0e4f169221e1406839148f3eb4302e17 SRA:SRR6214206 https://www.encodeproject.org/files/ENCFF349ISG/@@download/ENCFF349ISG.fastq.gz HiSeq 2000 /files/ENCFF559JAA/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF653MRG bam unfiltered alignments ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF339LBU, ENCFF349ISG, ENCFF643CGH 4901558872 ENCODE Processing Pipeline 660f142ef467060b880f6e64c16fb56f https://www.encodeproject.org/files/ENCFF653MRG/@@download/ENCFF653MRG.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF639ZPV bam unfiltered alignments ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF339LBU, ENCFF349ISG, ENCFF807MUK 4882716979 ENCODE Processing Pipeline 76a4ba5b4cea5160bbf456124a2867b3 https://www.encodeproject.org/files/ENCFF639ZPV/@@download/ENCFF639ZPV.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF031YAG bam alignments ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF339LBU, ENCFF349ISG, ENCFF807MUK 3195959043 ENCODE Processing Pipeline 37fad7cf76775120215dc007e7f7d368 https://www.encodeproject.org/files/ENCFF031YAG/@@download/ENCFF031YAG.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF210SBD bam alignments ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF339LBU, ENCFF349ISG, ENCFF643CGH 3196977121 ENCODE Processing Pipeline a47a379d500d23ce8327001c3c613841 https://www.encodeproject.org/files/ENCFF210SBD/@@download/ENCFF210SBD.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF647ASU bigWig fold change over control ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF210SBD 1176551354 ENCODE Processing Pipeline f8524985a5242b42ddb9f2846ae7dc8c https://www.encodeproject.org/files/ENCFF647ASU/@@download/ENCFF647ASU.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF945HYB bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF434OJH 45135 ENCODE Processing Pipeline b6018b274ee706b8110a19ba37e3ea29 https://www.encodeproject.org/files/ENCFF945HYB/@@download/ENCFF945HYB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF992MZM bigWig signal p-value ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF210SBD 1010442130 ENCODE Processing Pipeline 6d9e060080654a58b1c8829dbce1d415 https://www.encodeproject.org/files/ENCFF992MZM/@@download/ENCFF992MZM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF858JRL bed narrowPeak peaks ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF210SBD 5214806 ENCODE Processing Pipeline 9ce8ed3f2bd8d4a0b4f71dc03d468a36 https://www.encodeproject.org/files/ENCFF858JRL/@@download/ENCFF858JRL.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF610QOT bigBed narrowPeak peaks ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF858JRL 11449353 ENCODE Processing Pipeline 7f6caaf0e7f178d644a242ec8196d043 https://www.encodeproject.org/files/ENCFF610QOT/@@download/ENCFF610QOT.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF434OJH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF858JRL 1116 ENCODE Processing Pipeline eff37293fc7da1b818ab28dbaaced81d https://www.encodeproject.org/files/ENCFF434OJH/@@download/ENCFF434OJH.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF228ONB bigWig fold change over control ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF031YAG 1175715088 ENCODE Processing Pipeline 2e1c123c9fc4de22a38859ac0fe483a4 https://www.encodeproject.org/files/ENCFF228ONB/@@download/ENCFF228ONB.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF562NNY bigWig signal p-value ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF031YAG 1029199823 ENCODE Processing Pipeline 4887c2ba41df4c9982ae08130eb4d90f https://www.encodeproject.org/files/ENCFF562NNY/@@download/ENCFF562NNY.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF075WCP bed narrowPeak peaks ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF031YAG 5215129 ENCODE Processing Pipeline f6e0179eb4400c12766a4769cd8475fe https://www.encodeproject.org/files/ENCFF075WCP/@@download/ENCFF075WCP.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF793HCV bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF075WCP 936 ENCODE Processing Pipeline f66baaf54a9c8d4a9a7fbc712b91a5cb https://www.encodeproject.org/files/ENCFF793HCV/@@download/ENCFF793HCV.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF289CWN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF793HCV 77123 ENCODE Processing Pipeline b429de9e53556a3e16cb976367d5fff4 https://www.encodeproject.org/files/ENCFF289CWN/@@download/ENCFF289CWN.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF096WQD bigBed narrowPeak peaks ENCSR983SZL ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF075WCP 11431959 ENCODE Processing Pipeline f30b315f79bc50204938e231f56720e9 https://www.encodeproject.org/files/ENCFF096WQD/@@download/ENCFF096WQD.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF577YLD fastq reads ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF414MWJ 2226391573 Richard Myers, HAIB 7e474d394c79209ec046c6fdcce50b35 SRA:SRR6213875 https://www.encodeproject.org/files/ENCFF577YLD/@@download/ENCFF577YLD.fastq.gz HiSeq 2000 /files/ENCFF636HND/ released antibody characterized with exemption ENCFF414MWJ fastq reads ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF577YLD 2363589463 Richard Myers, HAIB 4c7e4e403ed0b0c1f818bd88a65f3a47 SRA:SRR6213875 https://www.encodeproject.org/files/ENCFF414MWJ/@@download/ENCFF414MWJ.fastq.gz HiSeq 2000 /files/ENCFF049HLF/ released antibody characterized with exemption ENCFF669YZE bam unfiltered alignments ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF414MWJ, ENCFF577YLD, ENCFF807MUK 5563070611 ENCODE Processing Pipeline ba27fe2760cb8b28649f8d0f09ea3096 https://www.encodeproject.org/files/ENCFF669YZE/@@download/ENCFF669YZE.bam hg19 released antibody characterized with exemption ENCFF752AIU bam unfiltered alignments ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF414MWJ, ENCFF577YLD, ENCFF643CGH 5588496754 ENCODE Processing Pipeline f2dbe8456f2c4e0e3a55e3188ef2c4ab https://www.encodeproject.org/files/ENCFF752AIU/@@download/ENCFF752AIU.bam GRCh38 released antibody characterized with exemption ENCFF793GQM bam alignments ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF414MWJ, ENCFF577YLD, ENCFF643CGH 4034058403 ENCODE Processing Pipeline 4749459c860ae1511e05b5b9ecbbe7ed https://www.encodeproject.org/files/ENCFF793GQM/@@download/ENCFF793GQM.bam GRCh38 released antibody characterized with exemption ENCFF585RLR bam alignments ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF414MWJ, ENCFF577YLD, ENCFF807MUK 4030434037 ENCODE Processing Pipeline 40ce4a103aef46394eac750087a01a43 https://www.encodeproject.org/files/ENCFF585RLR/@@download/ENCFF585RLR.bam hg19 released antibody characterized with exemption ENCFF471DUA bigBed narrowPeak peaks ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF784LSG 11843371 ENCODE Processing Pipeline 7ec7d31d75cf106a61f32645cdda7407 https://www.encodeproject.org/files/ENCFF471DUA/@@download/ENCFF471DUA.bigBed GRCh38 released antibody characterized with exemption ENCFF831ORZ bigWig signal p-value ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF793GQM 1260468518 ENCODE Processing Pipeline c73b1a58eb9a7260d77d878e13a43158 https://www.encodeproject.org/files/ENCFF831ORZ/@@download/ENCFF831ORZ.bigWig GRCh38 released antibody characterized with exemption ENCFF784LSG bed narrowPeak peaks ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF793GQM 5285515 ENCODE Processing Pipeline 58c69de03f703911fb9e04ef6aa411da https://www.encodeproject.org/files/ENCFF784LSG/@@download/ENCFF784LSG.bed.gz GRCh38 released antibody characterized with exemption ENCFF856BRS bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF784LSG 798 ENCODE Processing Pipeline bcb57db60365fcae2a584a9af7af3556 https://www.encodeproject.org/files/ENCFF856BRS/@@download/ENCFF856BRS.bed.gz GRCh38 released antibody characterized with exemption ENCFF642ASG bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF856BRS 16443 ENCODE Processing Pipeline 2c69f34861318ac5bb3b21ea42af45c1 https://www.encodeproject.org/files/ENCFF642ASG/@@download/ENCFF642ASG.bigBed GRCh38 released antibody characterized with exemption ENCFF137FJR bigWig fold change over control ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF793GQM 1211060140 ENCODE Processing Pipeline 2368a26a796d0779488add77a6f776ef https://www.encodeproject.org/files/ENCFF137FJR/@@download/ENCFF137FJR.bigWig GRCh38 released antibody characterized with exemption ENCFF574MRX bigWig signal p-value ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF585RLR 1258422618 ENCODE Processing Pipeline 0cd5e35447483eeb57c4e6710e82502b https://www.encodeproject.org/files/ENCFF574MRX/@@download/ENCFF574MRX.bigWig hg19 released antibody characterized with exemption ENCFF076DDS bigWig fold change over control ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF585RLR 1209907574 ENCODE Processing Pipeline 4edeef89af5c1964633133456bc6b69f https://www.encodeproject.org/files/ENCFF076DDS/@@download/ENCFF076DDS.bigWig hg19 released antibody characterized with exemption ENCFF845GGI bigBed narrowPeak peaks ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF797GOG 11816715 ENCODE Processing Pipeline 8174022c90b442734426d7aa86944126 https://www.encodeproject.org/files/ENCFF845GGI/@@download/ENCFF845GGI.bigBed hg19 released antibody characterized with exemption ENCFF408PSW bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF797GOG 982 ENCODE Processing Pipeline 39157f9344110ca446fe51e30b6ddca8 https://www.encodeproject.org/files/ENCFF408PSW/@@download/ENCFF408PSW.bed.gz hg19 released antibody characterized with exemption ENCFF625TEZ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF408PSW 16366 ENCODE Processing Pipeline ed016a89e7fb50260556ed3e400a4c3c https://www.encodeproject.org/files/ENCFF625TEZ/@@download/ENCFF625TEZ.bigBed hg19 released antibody characterized with exemption ENCFF797GOG bed narrowPeak peaks ENCSR573WYW ChIP-seq UBERON:0000945 stomach tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF585RLR 5281716 ENCODE Processing Pipeline 6aa06e44d0d1f05ae1e789f397450794 https://www.encodeproject.org/files/ENCFF797GOG/@@download/ENCFF797GOG.bed.gz hg19 released antibody characterized with exemption ENCFF837BAY fastq reads ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF258EWB 1792753856 Richard Myers, HAIB 6f8a839810501ca55a5436f980054208 SRA:SRR6214151 https://www.encodeproject.org/files/ENCFF837BAY/@@download/ENCFF837BAY.fastq.gz HiSeq 2000 /files/ENCFF005BUI/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF258EWB fastq reads ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF837BAY 1749081299 Richard Myers, HAIB 910a933fef389921b0e78b962bab045b SRA:SRR6214151 https://www.encodeproject.org/files/ENCFF258EWB/@@download/ENCFF258EWB.fastq.gz HiSeq 2000 /files/ENCFF841NYD/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF088YLM bam unfiltered alignments ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF258EWB, ENCFF643CGH, ENCFF837BAY 4267872310 ENCODE Processing Pipeline daaf3e4247a7e666cc6b0fa466eb3dba https://www.encodeproject.org/files/ENCFF088YLM/@@download/ENCFF088YLM.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF345LLY bam unfiltered alignments ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF258EWB, ENCFF807MUK, ENCFF837BAY 4247899242 ENCODE Processing Pipeline 41627e660ffcb8c04593769e7481de73 https://www.encodeproject.org/files/ENCFF345LLY/@@download/ENCFF345LLY.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF332RWH bam alignments ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF258EWB, ENCFF643CGH, ENCFF837BAY 2947752680 ENCODE Processing Pipeline da6a7f4cd16b3bf70bd41c02ba448ffd https://www.encodeproject.org/files/ENCFF332RWH/@@download/ENCFF332RWH.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF632PPF bam alignments ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF258EWB, ENCFF807MUK, ENCFF837BAY 2943973236 ENCODE Processing Pipeline 759a66ca109f7cbc572b07abd545c3d6 https://www.encodeproject.org/files/ENCFF632PPF/@@download/ENCFF632PPF.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF221GRG bigWig fold change over control ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF332RWH 1114823225 ENCODE Processing Pipeline d2f3ade0eccab1d153a68577ea6fda23 https://www.encodeproject.org/files/ENCFF221GRG/@@download/ENCFF221GRG.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF749HZJ bigBed narrowPeak peaks ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF673MXP 11571479 ENCODE Processing Pipeline 95bf3f5b3998e894da7a415ac8cd9bb0 https://www.encodeproject.org/files/ENCFF749HZJ/@@download/ENCFF749HZJ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF811FTS bigWig signal p-value ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF332RWH 1050040604 ENCODE Processing Pipeline 00e1e8c4549dafa5de3c567ba1f8d45a https://www.encodeproject.org/files/ENCFF811FTS/@@download/ENCFF811FTS.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF380WEI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF102IIP 28527 ENCODE Processing Pipeline 324f6c80d5d0bf35f12582782f0f1cb6 https://www.encodeproject.org/files/ENCFF380WEI/@@download/ENCFF380WEI.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF673MXP bed narrowPeak peaks ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF332RWH 5448563 ENCODE Processing Pipeline 916a7b54b0de5328756063cf5571ec43 https://www.encodeproject.org/files/ENCFF673MXP/@@download/ENCFF673MXP.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF102IIP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF673MXP 554 ENCODE Processing Pipeline e36f9003b99e32fd32e43c4160a53c60 https://www.encodeproject.org/files/ENCFF102IIP/@@download/ENCFF102IIP.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF442ECO bigWig signal p-value ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF632PPF 1160265613 ENCODE Processing Pipeline 2f4b2a9ea7e31a6766ec40b4bcf63d77 https://www.encodeproject.org/files/ENCFF442ECO/@@download/ENCFF442ECO.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF289TYN bigWig fold change over control ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF632PPF 1188261503 ENCODE Processing Pipeline 8330a127e188e47fd4d7972b062908d7 https://www.encodeproject.org/files/ENCFF289TYN/@@download/ENCFF289TYN.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF617XKX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF576LKG 431 ENCODE Processing Pipeline a8343f9be1f3c2da847a49b1d69b5511 https://www.encodeproject.org/files/ENCFF617XKX/@@download/ENCFF617XKX.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF709JWT bigBed narrowPeak peaks ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF576LKG 11538587 ENCODE Processing Pipeline 1ec1d35705669a05c47287b3465f364f https://www.encodeproject.org/files/ENCFF709JWT/@@download/ENCFF709JWT.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF576LKG bed narrowPeak peaks ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF632PPF 5428091 ENCODE Processing Pipeline 0b375c428c70248420bd909825e93196 https://www.encodeproject.org/files/ENCFF576LKG/@@download/ENCFF576LKG.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF467EXD bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR846TPT ChIP-seq UBERON:0010414 omental fat pad tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF617XKX 21648 ENCODE Processing Pipeline 38a0d5262da52771d7a6158e27cab5f1 https://www.encodeproject.org/files/ENCFF467EXD/@@download/ENCFF467EXD.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF000QIN bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QIU 653692019 Richard Myers, HAIB 0daf6ada5ad5e7c68aad7baa1d9ffa3b https://www.encodeproject.org/files/ENCFF000QIN/@@download/ENCFF000QIN.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QIO bigBed broadPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULS 152234 Richard Myers, HAIB 9ef58e0870c2400b33c042c3db3691e6 https://www.encodeproject.org/files/ENCFF000QIO/@@download/ENCFF000QIO.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QIP bigBed broadPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULU 171113 Richard Myers, HAIB c8ce200fbdfdd25f005dead28a7be7c6 https://www.encodeproject.org/files/ENCFF000QIP/@@download/ENCFF000QIP.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QIQ bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QIY 787131496 Richard Myers, HAIB 7ee60fd2b8f1f7477749e36532ecd239 https://www.encodeproject.org/files/ENCFF000QIQ/@@download/ENCFF000QIQ.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QIR bigWig raw signal ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 1 5740273 Richard Myers, HAIB 4c7e9588bc4363d402513ba269997929 https://www.encodeproject.org/files/ENCFF000QIR/@@download/ENCFF000QIR.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QIT bigWig raw signal ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 1 11615742 Richard Myers, HAIB ea73ba57e49e883b02a2d3a628feaeb9 https://www.encodeproject.org/files/ENCFF000QIT/@@download/ENCFF000QIT.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QIU fastq reads ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 630257150 Richard Myers, HAIB 7b932c43caf2c8923058d2c6952e4875 https://www.encodeproject.org/files/ENCFF000QIU/@@download/ENCFF000QIU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF000QIY fastq reads ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 763979674 Richard Myers, HAIB 157ca169f856e37b56aabbcb61b8c960 https://www.encodeproject.org/files/ENCFF000QIY/@@download/ENCFF000QIY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF001ULS bed broadPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 1 66359 Richard Myers, HAIB 507c6f9dcb6ee1c3db45c9de3ee24fe4 https://www.encodeproject.org/files/ENCFF001ULS/@@download/ENCFF001ULS.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF001ULU bed broadPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 1 67685 Richard Myers, HAIB a00ddf10b1437f02ac05bfd15d847a67 https://www.encodeproject.org/files/ENCFF001ULU/@@download/ENCFF001ULU.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CMU bed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 71409 ENCODE Consortium Analysis Working Group 7cfa19d276cd276596c0eca1da30d958 https://www.encodeproject.org/files/ENCFF002CMU/@@download/ENCFF002CMU.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth ENCFF147CFM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE ENCFF002CMU 205121 ENCODE Consortium e1a701a68bbb99855c37aa6c98a88614 https://www.encodeproject.org/files/ENCFF147CFM/@@download/ENCFF147CFM.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF926VYO bam unfiltered alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QIU, ENCFF643CGH 835939088 ENCODE Processing Pipeline 2604a4b2435e3f145dd652056b886363 https://www.encodeproject.org/files/ENCFF926VYO/@@download/ENCFF926VYO.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF393ZAK bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QIU, ENCFF643CGH 406772395 ENCODE Processing Pipeline 3afbfb2ad696557f226e46cd94cbd0db https://www.encodeproject.org/files/ENCFF393ZAK/@@download/ENCFF393ZAK.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF158OEK bam unfiltered alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIY, ENCFF643CGH 962747233 ENCODE Processing Pipeline 5e13b2fbc530c0f0e45ab11d7e0ea43e https://www.encodeproject.org/files/ENCFF158OEK/@@download/ENCFF158OEK.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF680COV bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIY, ENCFF643CGH 415460988 ENCODE Processing Pipeline 4d66132fa95cf021a9b565ddfda18500 https://www.encodeproject.org/files/ENCFF680COV/@@download/ENCFF680COV.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF799GRV bam unfiltered alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QIU, ENCFF807MUK 835040713 ENCODE Processing Pipeline 6d76e21a16bfe97a251fee332dec1173 https://www.encodeproject.org/files/ENCFF799GRV/@@download/ENCFF799GRV.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF132LHA bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QIU, ENCFF807MUK 407089372 ENCODE Processing Pipeline 1a0406a7db438f101e1012ad4bd69815 https://www.encodeproject.org/files/ENCFF132LHA/@@download/ENCFF132LHA.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF670GGQ bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIY, ENCFF807MUK 415811046 ENCODE Processing Pipeline 528466f7af58f8195203a0ed53c841a2 https://www.encodeproject.org/files/ENCFF670GGQ/@@download/ENCFF670GGQ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF346GCX bam unfiltered alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIY, ENCFF807MUK 959984578 ENCODE Processing Pipeline e2e7cede9bb7f5c69cb6dba41c4399b3 https://www.encodeproject.org/files/ENCFF346GCX/@@download/ENCFF346GCX.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF741CWQ bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF393ZAK, ENCFF772PJM 206747064 ENCODE Processing Pipeline 325d273d6d16af732e5929e462ba4dd0 https://www.encodeproject.org/files/ENCFF741CWQ/@@download/ENCFF741CWQ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF294WXY bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF393ZAK, ENCFF772PJM 166850950 ENCODE Processing Pipeline 7fbc65546df871c3a9c79358e07c8686 https://www.encodeproject.org/files/ENCFF294WXY/@@download/ENCFF294WXY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF455SIF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144DMD 222013 ENCODE Processing Pipeline 5e101e87acfa02901f4a65050bfa6384 https://www.encodeproject.org/files/ENCFF455SIF/@@download/ENCFF455SIF.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF861VUI bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF680COV, ENCFF772PJM 161349045 ENCODE Processing Pipeline b52725bfa343892a61c5c52dff23dd08 https://www.encodeproject.org/files/ENCFF861VUI/@@download/ENCFF861VUI.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF862ATB bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393ZAK, ENCFF680COV, ENCFF772PJM 301069886 ENCODE Processing Pipeline 52ed201c354f63eb4dfaa857ca3ff626 https://www.encodeproject.org/files/ENCFF862ATB/@@download/ENCFF862ATB.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF734MTF bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF950RJP 7626994 ENCODE Processing Pipeline f2114d1c99adf28916940046d3a5d1dc https://www.encodeproject.org/files/ENCFF734MTF/@@download/ENCFF734MTF.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF971ZIJ bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393ZAK, ENCFF680COV, ENCFF772PJM 198780751 ENCODE Processing Pipeline dcd07d2a4a7f3b86662bfa96bec97b05 https://www.encodeproject.org/files/ENCFF971ZIJ/@@download/ENCFF971ZIJ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF950RJP bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF680COV, ENCFF772PJM 3809186 ENCODE Processing Pipeline 9b71261baab03d5c895ccffc7fea547b https://www.encodeproject.org/files/ENCFF950RJP/@@download/ENCFF950RJP.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF130TPD bed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF061TOQ, ENCFF419RSJ, ENCFF510COO, ENCFF950RJP 106296 ENCODE Processing Pipeline b41833219a82f27ff1db888e32c31b17 https://www.encodeproject.org/files/ENCFF130TPD/@@download/ENCFF130TPD.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF510COO bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF393ZAK, ENCFF772PJM 4285892 ENCODE Processing Pipeline 079c679cbd2ec6d3b42623ad499f49a0 https://www.encodeproject.org/files/ENCFF510COO/@@download/ENCFF510COO.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF061TOQ bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393ZAK, ENCFF680COV, ENCFF772PJM 4777215 ENCODE Processing Pipeline bcfd6b78c9afa0aacc5f4588ede61829 https://www.encodeproject.org/files/ENCFF061TOQ/@@download/ENCFF061TOQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF691RKN bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF061TOQ 10364549 ENCODE Processing Pipeline f484bb3b8595d7973483fa804b202651 https://www.encodeproject.org/files/ENCFF691RKN/@@download/ENCFF691RKN.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF144DMD bed narrowPeak conservative idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF061TOQ, ENCFF419RSJ, ENCFF510COO, ENCFF950RJP 84767 ENCODE Processing Pipeline f8a3a674d78f788bd85453d0e28e5e90 https://www.encodeproject.org/files/ENCFF144DMD/@@download/ENCFF144DMD.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF629JMT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF130TPD 255455 ENCODE Processing Pipeline 3507b8e99888fc4d927a1c04a145a954 https://www.encodeproject.org/files/ENCFF629JMT/@@download/ENCFF629JMT.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF520LJR bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF680COV, ENCFF772PJM 200168191 ENCODE Processing Pipeline 590ec5da92220ca5e7c9ff17c94bdf9e https://www.encodeproject.org/files/ENCFF520LJR/@@download/ENCFF520LJR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF502MUI bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF510COO 9795643 ENCODE Processing Pipeline 6e5ea488d40e41a4170f6d779ff48691 https://www.encodeproject.org/files/ENCFF502MUI/@@download/ENCFF502MUI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth ENCFF988XKO fastq reads ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1750611032 Richard Myers, HAIB 121bc4ae2311d730afcfc45fa506cc9e SRA:SRR5338867 https://www.encodeproject.org/files/ENCFF988XKO/@@download/ENCFF988XKO.fastq.gz HiSeq 2000 /files/ENCFF247MLF/ released antibody characterized with exemption biological replicates with identical biosample ENCFF573BXF fastq reads ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 1 50 single-ended 2750549534 Richard Myers, HAIB 887ad2021ba480ceaf27b798403ea293 SRA:SRR5338866 https://www.encodeproject.org/files/ENCFF573BXF/@@download/ENCFF573BXF.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption biological replicates with identical biosample ENCFF254XNM bam unfiltered alignments ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF988XKO 1958716445 ENCODE Processing Pipeline b70a724807782bf71fb9751e4f651a41 https://www.encodeproject.org/files/ENCFF254XNM/@@download/ENCFF254XNM.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF499VEN bam alignments ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF988XKO 1443819584 ENCODE Processing Pipeline f300986be2d3dadda8436d7a94a06c58 https://www.encodeproject.org/files/ENCFF499VEN/@@download/ENCFF499VEN.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF272XYT bam unfiltered alignments ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 50 ENCFF573BXF, ENCFF643CGH 3019278676 ENCODE Processing Pipeline 04c67a275e4f4c148f9546f1078194f1 https://www.encodeproject.org/files/ENCFF272XYT/@@download/ENCFF272XYT.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF376QOH bam alignments ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 50 ENCFF573BXF, ENCFF643CGH 2218040920 ENCODE Processing Pipeline 7aef350aa89e0eda59662183e99f966c https://www.encodeproject.org/files/ENCFF376QOH/@@download/ENCFF376QOH.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF449MVQ bigWig signal p-value ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF259AXY, ENCFF499VEN 686007419 ENCODE Processing Pipeline 17d1b1c5c325ce3dde4f0a1cabf0791e https://www.encodeproject.org/files/ENCFF449MVQ/@@download/ENCFF449MVQ.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF158JLO bigWig signal p-value ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF259AXY, ENCFF376QOH, ENCFF610PNU 1040035146 ENCODE Processing Pipeline fe939bb6c93b4a4ebead5abf29e8f30f https://www.encodeproject.org/files/ENCFF158JLO/@@download/ENCFF158JLO.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF054PKR bigWig fold change over control ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF259AXY, ENCFF376QOH, ENCFF610PNU 1253574568 ENCODE Processing Pipeline 8b59619179b7259e41347bc00724497e https://www.encodeproject.org/files/ENCFF054PKR/@@download/ENCFF054PKR.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF875FYY bigWig signal p-value ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF259AXY, ENCFF376QOH, ENCFF499VEN, ENCFF610PNU 1511819720 ENCODE Processing Pipeline 9ef741f968a335011721bc95cc7976d4 https://www.encodeproject.org/files/ENCFF875FYY/@@download/ENCFF875FYY.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF570FMI bigWig fold change over control ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF259AXY, ENCFF499VEN 746225410 ENCODE Processing Pipeline 7fb089b89bb62ea08fef815c10efefc1 https://www.encodeproject.org/files/ENCFF570FMI/@@download/ENCFF570FMI.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF919WRR bigWig fold change over control ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF259AXY, ENCFF376QOH, ENCFF499VEN, ENCFF610PNU 1660191016 ENCODE Processing Pipeline 0d754422a638e0e8d817a7b2ede81ad0 https://www.encodeproject.org/files/ENCFF919WRR/@@download/ENCFF919WRR.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF278BOV bed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF259AXY, ENCFF376QOH, ENCFF499VEN, ENCFF610PNU 7091386 ENCODE Processing Pipeline 41713053ca961ef7e486374140e85cfe https://www.encodeproject.org/files/ENCFF278BOV/@@download/ENCFF278BOV.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF165GTT bed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF259AXY, ENCFF376QOH, ENCFF610PNU 6549868 ENCODE Processing Pipeline 1cee84719887b8330ecd449709eb2ee6 https://www.encodeproject.org/files/ENCFF165GTT/@@download/ENCFF165GTT.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF619KUC bigBed narrowPeak optimal idr thresholded peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF669BQN 1138261 ENCODE Processing Pipeline aff84722e955907d87bad65546b7d101 https://www.encodeproject.org/files/ENCFF619KUC/@@download/ENCFF619KUC.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF399LBU bigBed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF165GTT 13360532 ENCODE Processing Pipeline db1727db8b0e94a6f14a85a681c24230 https://www.encodeproject.org/files/ENCFF399LBU/@@download/ENCFF399LBU.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF653SGK bigBed narrowPeak conservative idr thresholded peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF457PHY 1024920 ENCODE Processing Pipeline cda0bb8df1d86c7f5cc3525e7e2beae2 https://www.encodeproject.org/files/ENCFF653SGK/@@download/ENCFF653SGK.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF128FYI bigBed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF278BOV 13368378 ENCODE Processing Pipeline 36438933156c84afe46e2056dc51949b https://www.encodeproject.org/files/ENCFF128FYI/@@download/ENCFF128FYI.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF669BQN bed narrowPeak optimal idr thresholded peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF165GTT, ENCFF278BOV, ENCFF419RSJ, ENCFF421FKH 607432 ENCODE Processing Pipeline bde12ac03fcd2de469136193413d0c53 https://www.encodeproject.org/files/ENCFF669BQN/@@download/ENCFF669BQN.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF421FKH bed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF259AXY, ENCFF499VEN 6076536 ENCODE Processing Pipeline 0e99f2c788e20b6378c9611a4457bd33 https://www.encodeproject.org/files/ENCFF421FKH/@@download/ENCFF421FKH.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF259QHX bigBed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF421FKH 13286056 ENCODE Processing Pipeline 1a5840e9099412d0fe16c3cb2144ac6b https://www.encodeproject.org/files/ENCFF259QHX/@@download/ENCFF259QHX.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF457PHY bed narrowPeak conservative idr thresholded peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF165GTT, ENCFF278BOV, ENCFF419RSJ, ENCFF421FKH 536450 ENCODE Processing Pipeline 63ed914edbcf26e9b4f9db02bcf3e189 https://www.encodeproject.org/files/ENCFF457PHY/@@download/ENCFF457PHY.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF080FII bam unfiltered alignments ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 50 ENCFF807MUK, ENCFF988XKO 1948279743 ENCODE Processing Pipeline 439253733ec3f0efabcb2249413f37fe https://www.encodeproject.org/files/ENCFF080FII/@@download/ENCFF080FII.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF549RWC bam alignments ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 50 ENCFF807MUK, ENCFF988XKO 1443671011 ENCODE Processing Pipeline 7b48f6771082b0e18ca54dc1d497be6e https://www.encodeproject.org/files/ENCFF549RWC/@@download/ENCFF549RWC.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF840JJL bam unfiltered alignments ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 50 ENCFF573BXF, ENCFF807MUK 3001652213 ENCODE Processing Pipeline 535f1b36d0ce0c392b6377fe053471c0 https://www.encodeproject.org/files/ENCFF840JJL/@@download/ENCFF840JJL.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF888UFX bam alignments ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 50 ENCFF573BXF, ENCFF807MUK 2217497099 ENCODE Processing Pipeline 823e831af408ef65665000346fb29e49 https://www.encodeproject.org/files/ENCFF888UFX/@@download/ENCFF888UFX.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF639XOK bigWig signal p-value ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF321UJV, ENCFF549RWC, ENCFF871NUZ, ENCFF888UFX 1492667537 ENCODE Processing Pipeline 93ca6ee0bbbd0122088ec0b73a8dfac2 https://www.encodeproject.org/files/ENCFF639XOK/@@download/ENCFF639XOK.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF254DIB bigWig signal p-value ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF549RWC, ENCFF871NUZ 710608877 ENCODE Processing Pipeline aa89e319f4ff2a86d428bc6ebb43f999 https://www.encodeproject.org/files/ENCFF254DIB/@@download/ENCFF254DIB.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF996JVA bigWig signal p-value ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF871NUZ, ENCFF888UFX 1293262536 ENCODE Processing Pipeline 006d1be33652b28681c9114b2f22adc1 https://www.encodeproject.org/files/ENCFF996JVA/@@download/ENCFF996JVA.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF836LVY bigBed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF409TGM 13303665 ENCODE Processing Pipeline d14f938cc1de765cc4b905b1eb67d13d https://www.encodeproject.org/files/ENCFF836LVY/@@download/ENCFF836LVY.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF943VCV bigBed narrowPeak conservative idr thresholded peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF046CGT 996466 ENCODE Processing Pipeline e07c406ac9c54eddc006ea17bd112944 https://www.encodeproject.org/files/ENCFF943VCV/@@download/ENCFF943VCV.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF409TGM bed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF321UJV, ENCFF549RWC, ENCFF871NUZ, ENCFF888UFX 7056004 ENCODE Processing Pipeline db38871dab608c5f8df541057aaa0622 https://www.encodeproject.org/files/ENCFF409TGM/@@download/ENCFF409TGM.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF897TYA bigWig fold change over control ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF549RWC, ENCFF871NUZ 735699112 ENCODE Processing Pipeline efe22daa95cdbafd83768f4db12304df https://www.encodeproject.org/files/ENCFF897TYA/@@download/ENCFF897TYA.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF773KEV bigWig fold change over control ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF321UJV, ENCFF549RWC, ENCFF871NUZ, ENCFF888UFX 1650045591 ENCODE Processing Pipeline f042c9ac1394923dc2a76477383da6bc https://www.encodeproject.org/files/ENCFF773KEV/@@download/ENCFF773KEV.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF371DUN bed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF871NUZ, ENCFF888UFX 6564913 ENCODE Processing Pipeline 6ca81dba4fd491968e30149457f0af5f https://www.encodeproject.org/files/ENCFF371DUN/@@download/ENCFF371DUN.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF427LXZ bigWig fold change over control ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF871NUZ, ENCFF888UFX 1265120238 ENCODE Processing Pipeline 3b53d6c6dee7217022c7b53c3d353a83 https://www.encodeproject.org/files/ENCFF427LXZ/@@download/ENCFF427LXZ.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF244GBU bigBed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF137BQM 13194535 ENCODE Processing Pipeline 7ab9c27919e9652f0eab5ed2adedb222 https://www.encodeproject.org/files/ENCFF244GBU/@@download/ENCFF244GBU.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF640QNO bigBed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF371DUN 13361138 ENCODE Processing Pipeline 355b302a5536dc0d287b4aa86bfa6cd5 https://www.encodeproject.org/files/ENCFF640QNO/@@download/ENCFF640QNO.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF612TRG bed narrowPeak optimal idr thresholded peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF137BQM, ENCFF371DUN, ENCFF409TGM 593414 ENCODE Processing Pipeline 4f8617bfcdcb64e666fd3bea1450f25e https://www.encodeproject.org/files/ENCFF612TRG/@@download/ENCFF612TRG.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF258FGR bigBed narrowPeak optimal idr thresholded peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF612TRG 1114557 ENCODE Processing Pipeline 7462b54b0225fb34ce1b482bbc57eba4 https://www.encodeproject.org/files/ENCFF258FGR/@@download/ENCFF258FGR.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF137BQM bed narrowPeak peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF549RWC, ENCFF871NUZ 6011079 ENCODE Processing Pipeline b9092bedf104651ae59cc5e1c6395e59 https://www.encodeproject.org/files/ENCFF137BQM/@@download/ENCFF137BQM.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF046CGT bed narrowPeak conservative idr thresholded peaks ENCSR521IID ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF137BQM, ENCFF371DUN, ENCFF409TGM 518694 ENCODE Processing Pipeline 87ea272f67b77a1b9e3cc46a0303d553 https://www.encodeproject.org/files/ENCFF046CGT/@@download/ENCFF046CGT.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF000NUE bam alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NUP 767215355 Richard Myers, HAIB de6102fdd7cea95ee3ffb167f20dd5f8 https://www.encodeproject.org/files/ENCFF000NUE/@@download/ENCFF000NUE.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NUF bigWig raw signal ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 1 46782844 Richard Myers, HAIB 6800d6701c8a15837dad739afc46fb42 https://www.encodeproject.org/files/ENCFF000NUF/@@download/ENCFF000NUF.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NUG bam alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NUV 1467733019 Richard Myers, HAIB d1c4960436d792ffb13c0e3ea2512930 https://www.encodeproject.org/files/ENCFF000NUG/@@download/ENCFF000NUG.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NUH bigWig raw signal ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 1 37621433 Richard Myers, HAIB 8fb63e9748bdf41924a9b1c2c75dcbbc https://www.encodeproject.org/files/ENCFF000NUH/@@download/ENCFF000NUH.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NUI bigBed broadPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TWR 1240079 Richard Myers, HAIB 80cbf5826ae8fb03e210b4315746a0c2 https://www.encodeproject.org/files/ENCFF000NUI/@@download/ENCFF000NUI.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NUJ bigBed broadPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TWT 1398547 Richard Myers, HAIB 3367ddbe03b4a01aa3738973647c3917 https://www.encodeproject.org/files/ENCFF000NUJ/@@download/ENCFF000NUJ.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NUP fastq reads ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 817324317 Richard Myers, HAIB 0d40a7dda221db39df5f700461adcce9 https://www.encodeproject.org/files/ENCFF000NUP/@@download/ENCFF000NUP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, low read depth biological replicates with identical biosample ENCFF000NUV fastq reads ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1833866718 Richard Myers, HAIB f9af8da2f2d96881d40bf376af3a4132 https://www.encodeproject.org/files/ENCFF000NUV/@@download/ENCFF000NUV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth biological replicates with identical biosample ENCFF001TWR bed broadPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 1 639770 Richard Myers, HAIB ffc9f7f1d08a6b46b7ecf325d2dde29f https://www.encodeproject.org/files/ENCFF001TWR/@@download/ENCFF001TWR.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TWT bed broadPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 1 795385 Richard Myers, HAIB d8f165e304d9b15630734e741144d970 https://www.encodeproject.org/files/ENCFF001TWT/@@download/ENCFF001TWT.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CGV bed narrowPeak optimal idr thresholded peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 709523 ENCODE Consortium Analysis Working Group 5f6fc43a9cd69bd28ade083a5de1345c https://www.encodeproject.org/files/ENCFF002CGV/@@download/ENCFF002CGV.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF752SDC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE ENCFF002CGV 1462375 ENCODE Consortium 95b641af2f21c1878502356767859911 https://www.encodeproject.org/files/ENCFF752SDC/@@download/ENCFF752SDC.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF164HPP bam unfiltered alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NUP, ENCFF643CGH 1016464040 ENCODE Processing Pipeline dd202998ee9336b9c89232ddda1e4d94 https://www.encodeproject.org/files/ENCFF164HPP/@@download/ENCFF164HPP.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF340QCB bam alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NUP, ENCFF643CGH 605403432 ENCODE Processing Pipeline a80036176a0198b54323b81a6b7a6291 https://www.encodeproject.org/files/ENCFF340QCB/@@download/ENCFF340QCB.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF648JQE bam unfiltered alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NUV, ENCFF643CGH 2219242915 ENCODE Processing Pipeline 2f714083c8999767f3ef03c3191a166c https://www.encodeproject.org/files/ENCFF648JQE/@@download/ENCFF648JQE.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF426RGL bam alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NUV, ENCFF643CGH 1063401678 ENCODE Processing Pipeline 1347ae3db03cd269565f27aee07a837f https://www.encodeproject.org/files/ENCFF426RGL/@@download/ENCFF426RGL.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF305MCD bam unfiltered alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NUV, ENCFF807MUK 2212662930 ENCODE Processing Pipeline 39319642285caa5cbace946cb8e59900 https://www.encodeproject.org/files/ENCFF305MCD/@@download/ENCFF305MCD.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF243EMB bam unfiltered alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NUP, ENCFF807MUK 1015061524 ENCODE Processing Pipeline 9ceccf039c0714807577e427672f1968 https://www.encodeproject.org/files/ENCFF243EMB/@@download/ENCFF243EMB.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF336DPP bam alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NUP, ENCFF807MUK 599972860 ENCODE Processing Pipeline de3fbd6fa17003548fd81a6525c7a16a https://www.encodeproject.org/files/ENCFF336DPP/@@download/ENCFF336DPP.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF069CYJ bam alignments ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NUV, ENCFF807MUK 1059531670 ENCODE Processing Pipeline fb9bf7af59c63d3cf24e264b3a7fad64 https://www.encodeproject.org/files/ENCFF069CYJ/@@download/ENCFF069CYJ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF113ZCS bigWig signal p-value ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF426RGL, ENCFF562HPN 452817550 ENCODE Processing Pipeline b84ae1a1a56a6b67b30a647e9bc43d81 https://www.encodeproject.org/files/ENCFF113ZCS/@@download/ENCFF113ZCS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF980LUU bigWig signal p-value ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF340QCB, ENCFF438FFV 452768594 ENCODE Processing Pipeline 7b21b5743b1bfdbc6ac52df270203f11 https://www.encodeproject.org/files/ENCFF980LUU/@@download/ENCFF980LUU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF243MXE bigWig signal p-value ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF340QCB, ENCFF426RGL, ENCFF438FFV, ENCFF562HPN 798868594 ENCODE Processing Pipeline 690690656ac8cf3df50ccbf014310519 https://www.encodeproject.org/files/ENCFF243MXE/@@download/ENCFF243MXE.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF244IRL bigWig fold change over control ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF426RGL, ENCFF562HPN 425055723 ENCODE Processing Pipeline e7fed54902e4f20b1e3e1c4d79621672 https://www.encodeproject.org/files/ENCFF244IRL/@@download/ENCFF244IRL.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF876OVA bigBed narrowPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF537FLG 11368561 ENCODE Processing Pipeline 33b4f027bd22edb61fca51c6490e592c https://www.encodeproject.org/files/ENCFF876OVA/@@download/ENCFF876OVA.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF303NPO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF210IRE 917961 ENCODE Processing Pipeline 615d514fda8e07174b310bbccbe7da2f https://www.encodeproject.org/files/ENCFF303NPO/@@download/ENCFF303NPO.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF004UMO bed narrowPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF340QCB, ENCFF438FFV 4875831 ENCODE Processing Pipeline 37fdfc466c60bbb1e60f823b42950b51 https://www.encodeproject.org/files/ENCFF004UMO/@@download/ENCFF004UMO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF809GCI bigWig fold change over control ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF340QCB, ENCFF438FFV 256386794 ENCODE Processing Pipeline 62270604a990c8c0ec76188c4baf01ed https://www.encodeproject.org/files/ENCFF809GCI/@@download/ENCFF809GCI.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF007KQM bed narrowPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF426RGL, ENCFF562HPN 4978842 ENCODE Processing Pipeline ec6d3385fe3bdce11b017a3b7daca7e9 https://www.encodeproject.org/files/ENCFF007KQM/@@download/ENCFF007KQM.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF731FFI bigBed narrowPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF007KQM 11178446 ENCODE Processing Pipeline b1b47a1988ca490c387b960116ceb3f0 https://www.encodeproject.org/files/ENCFF731FFI/@@download/ENCFF731FFI.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF107LDM bigWig fold change over control ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF340QCB, ENCFF426RGL, ENCFF438FFV, ENCFF562HPN 743337356 ENCODE Processing Pipeline b1e91d3ce500741ca50b16f8d61462ba https://www.encodeproject.org/files/ENCFF107LDM/@@download/ENCFF107LDM.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF537FLG bed narrowPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF340QCB, ENCFF426RGL, ENCFF438FFV, ENCFF562HPN 5831805 ENCODE Processing Pipeline da98fc462cc97cb34cdeeab01d24d221 https://www.encodeproject.org/files/ENCFF537FLG/@@download/ENCFF537FLG.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF874WCG bigBed narrowPeak peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF004UMO 10459895 ENCODE Processing Pipeline 1a75cfbc3db6819d28ebef0a3741762e https://www.encodeproject.org/files/ENCFF874WCG/@@download/ENCFF874WCG.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF210IRE bed narrowPeak conservative idr thresholded peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF004UMO, ENCFF007KQM, ENCFF419RSJ, ENCFF537FLG 523118 ENCODE Processing Pipeline 3e995ce721c960159c52b7b6ac6311e6 https://www.encodeproject.org/files/ENCFF210IRE/@@download/ENCFF210IRE.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF358VLN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF864NSW 1396053 ENCODE Processing Pipeline 63f9d741098980e49b1ed76759bdbb08 https://www.encodeproject.org/files/ENCFF358VLN/@@download/ENCFF358VLN.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF864NSW bed narrowPeak optimal idr thresholded peaks ENCSR000BGU ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EBF1-human ENCAB000AFX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF004UMO, ENCFF007KQM, ENCFF419RSJ, ENCFF537FLG 680984 ENCODE Processing Pipeline 5b9d91a0c2616a19e725712cbf3da5b3 https://www.encodeproject.org/files/ENCFF864NSW/@@download/ENCFF864NSW.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF000OHG bam alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OHX 857253736 Richard Myers, HAIB 9d06a8a18678d00b989c46c85d9adf4c https://www.encodeproject.org/files/ENCFF000OHG/@@download/ENCFF000OHG.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OHI bigBed broadPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZQ 360911 Richard Myers, HAIB 88aa8d04ba61ab96167a25000af1cf83 https://www.encodeproject.org/files/ENCFF000OHI/@@download/ENCFF000OHI.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OHJ bigBed broadPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZR 328906 Richard Myers, HAIB 0c5fc5db7b507d905faee8c055704b75 https://www.encodeproject.org/files/ENCFF000OHJ/@@download/ENCFF000OHJ.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OHK bam alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OHV 722791068 Richard Myers, HAIB 3f0ca6483a9925d4c13359ecdb505ad4 https://www.encodeproject.org/files/ENCFF000OHK/@@download/ENCFF000OHK.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OHL bigWig raw signal ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 12368001 Richard Myers, HAIB c6a69939a090bc7367080078bcad3bc8 https://www.encodeproject.org/files/ENCFF000OHL/@@download/ENCFF000OHL.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OHM bigWig raw signal ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 10422337 Richard Myers, HAIB 5940434134376e375279ef900e57a20f https://www.encodeproject.org/files/ENCFF000OHM/@@download/ENCFF000OHM.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OHV fastq reads ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 704105796 Richard Myers, HAIB 6b1b4cda0ca7cdc0aa0dd97ea68fbff9 https://www.encodeproject.org/files/ENCFF000OHV/@@download/ENCFF000OHV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, low read depth biological replicates with identical biosample ENCFF000OHX fastq reads ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 950797356 Richard Myers, HAIB 058d428bcac9e7124d94b50baa6bea08 https://www.encodeproject.org/files/ENCFF000OHX/@@download/ENCFF000OHX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth biological replicates with identical biosample ENCFF001TZQ bed broadPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 170495 Richard Myers, HAIB caf28f513f044baf77fb13ce7985654f https://www.encodeproject.org/files/ENCFF001TZQ/@@download/ENCFF001TZQ.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TZR bed broadPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 148037 Richard Myers, HAIB 192ea16a9b3ac2b137f57e97666809c2 https://www.encodeproject.org/files/ENCFF001TZR/@@download/ENCFF001TZR.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CID bed narrowPeak optimal idr thresholded peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 45250 ENCODE Consortium Analysis Working Group aba4f859bb9144077368e422a7f84b12 https://www.encodeproject.org/files/ENCFF002CID/@@download/ENCFF002CID.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF923EPQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE ENCFF002CID 137556 ENCODE Consortium 1fb322ff76ff08a786fa228e42abe6ba https://www.encodeproject.org/files/ENCFF923EPQ/@@download/ENCFF923EPQ.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF166QSR bam unfiltered alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OHV, ENCFF643CGH 929974444 ENCODE Processing Pipeline f88a37454bbf9c0331b6612a75624700 https://www.encodeproject.org/files/ENCFF166QSR/@@download/ENCFF166QSR.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF432KDE bam alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OHV, ENCFF643CGH 587624345 ENCODE Processing Pipeline 83353cb14ef5ed7590bb03fdf694855d https://www.encodeproject.org/files/ENCFF432KDE/@@download/ENCFF432KDE.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF772LSQ bam unfiltered alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OHX, ENCFF643CGH 1211716453 ENCODE Processing Pipeline c19c4d1681c45069a19022ae1ecb48e6 https://www.encodeproject.org/files/ENCFF772LSQ/@@download/ENCFF772LSQ.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF004PAV bam alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OHX, ENCFF643CGH 665357834 ENCODE Processing Pipeline 5bba72717136ba0787037aebd79baf51 https://www.encodeproject.org/files/ENCFF004PAV/@@download/ENCFF004PAV.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF776FZQ bam unfiltered alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OHX, ENCFF807MUK 1207851335 ENCODE Processing Pipeline 94a9e54cd2acb8bb272b318c42311e7e https://www.encodeproject.org/files/ENCFF776FZQ/@@download/ENCFF776FZQ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF963NKM bam alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OHX, ENCFF807MUK 661608896 ENCODE Processing Pipeline facc4d813825f77f913b714408132973 https://www.encodeproject.org/files/ENCFF963NKM/@@download/ENCFF963NKM.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF643YAD bam unfiltered alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OHV, ENCFF807MUK 927286303 ENCODE Processing Pipeline caad1d5e4194a699b8a95d34150ddef6 https://www.encodeproject.org/files/ENCFF643YAD/@@download/ENCFF643YAD.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF918QFL bam alignments ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OHV, ENCFF807MUK 582838291 ENCODE Processing Pipeline 67bf4eb9e268e82fad1efb8a7faf1306 https://www.encodeproject.org/files/ENCFF918QFL/@@download/ENCFF918QFL.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF998BZC bigWig signal p-value ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF004PAV, ENCFF562HPN 419685046 ENCODE Processing Pipeline 4a8eb47b0b9fbb619af36ae9d0f80214 https://www.encodeproject.org/files/ENCFF998BZC/@@download/ENCFF998BZC.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF723QNL bigWig signal p-value ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF432KDE, ENCFF438FFV 462918110 ENCODE Processing Pipeline a6110a5b91d5584ed51ba8a52bc59142 https://www.encodeproject.org/files/ENCFF723QNL/@@download/ENCFF723QNL.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF947VFN bigWig signal p-value ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF004PAV, ENCFF432KDE, ENCFF438FFV, ENCFF562HPN 829450172 ENCODE Processing Pipeline bd02f885d10bdf41c833603f0c9921ae https://www.encodeproject.org/files/ENCFF947VFN/@@download/ENCFF947VFN.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF974VXQ bigWig fold change over control ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF004PAV, ENCFF562HPN 301892186 ENCODE Processing Pipeline d0433ae3cb57a6eb32294597de73fb7f https://www.encodeproject.org/files/ENCFF974VXQ/@@download/ENCFF974VXQ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF578SJM bed narrowPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF004PAV, ENCFF562HPN 4263863 ENCODE Processing Pipeline bf911a62287e93421e8cc38e32f989dc https://www.encodeproject.org/files/ENCFF578SJM/@@download/ENCFF578SJM.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF881WWO bigWig fold change over control ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF432KDE, ENCFF438FFV 273343054 ENCODE Processing Pipeline 43b525b8b0724f996abbb0840a13cdf7 https://www.encodeproject.org/files/ENCFF881WWO/@@download/ENCFF881WWO.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF806TFL bigWig fold change over control ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF004PAV, ENCFF432KDE, ENCFF438FFV, ENCFF562HPN 660584397 ENCODE Processing Pipeline 37654ffe4880b4a2d3cfed6317ff9b5c https://www.encodeproject.org/files/ENCFF806TFL/@@download/ENCFF806TFL.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF226JMI bed narrowPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF004PAV, ENCFF432KDE, ENCFF438FFV, ENCFF562HPN 5412960 ENCODE Processing Pipeline 804833b3b0caacc2119a2724ca636ad1 https://www.encodeproject.org/files/ENCFF226JMI/@@download/ENCFF226JMI.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF447FTH bigBed narrowPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF467OPY 10427038 ENCODE Processing Pipeline 7571c725d9b137ea14adf58b48c987d0 https://www.encodeproject.org/files/ENCFF447FTH/@@download/ENCFF447FTH.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF773OQL bed narrowPeak optimal idr thresholded peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF226JMI, ENCFF419RSJ, ENCFF467OPY, ENCFF578SJM 49529 ENCODE Processing Pipeline 4d7c3c256c2860a663dfe7f237fd63f8 https://www.encodeproject.org/files/ENCFF773OQL/@@download/ENCFF773OQL.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF205WFG bigBed narrowPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF226JMI 11444570 ENCODE Processing Pipeline bb8e699fca3e8f6e24e7dff6a15673e7 https://www.encodeproject.org/files/ENCFF205WFG/@@download/ENCFF205WFG.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF526PMD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF362VQO 137892 ENCODE Processing Pipeline d57479660d9af335d6bc18d9949c3401 https://www.encodeproject.org/files/ENCFF526PMD/@@download/ENCFF526PMD.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF467OPY bed narrowPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF432KDE, ENCFF438FFV 4165986 ENCODE Processing Pipeline 02c5dcb0d2aceafc8ccfeaa643243ea0 https://www.encodeproject.org/files/ENCFF467OPY/@@download/ENCFF467OPY.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF259MRH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF773OQL 144722 ENCODE Processing Pipeline 4ddddd7cd060122e59ac0b0cfdd5dd8a https://www.encodeproject.org/files/ENCFF259MRH/@@download/ENCFF259MRH.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF323YMP bigBed narrowPeak peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF578SJM 10677637 ENCODE Processing Pipeline 03a28ed7f742b4d689331b11192c7600 https://www.encodeproject.org/files/ENCFF323YMP/@@download/ENCFF323YMP.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF362VQO bed narrowPeak conservative idr thresholded peaks ENCSR000BHC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF226JMI, ENCFF419RSJ, ENCFF467OPY, ENCFF578SJM 45318 ENCODE Processing Pipeline b4fddbeb12701b92d2c3b7cc11a047ee https://www.encodeproject.org/files/ENCFF362VQO/@@download/ENCFF362VQO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF000QKB bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 303331632 Richard Myers, HAIB e0837fec24ce66b8170987618c2f3212 https://www.encodeproject.org/files/ENCFF000QKB/@@download/ENCFF000QKB.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF000QKC bigBed broadPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UME 599837 Richard Myers, HAIB 77f3d828340eed4d06c2ca51309ca427 https://www.encodeproject.org/files/ENCFF000QKC/@@download/ENCFF000QKC.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF000QKD bigBed broadPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UMD 231287 Richard Myers, HAIB f7ff890343f10cae9ed42cc7c2eb60b8 https://www.encodeproject.org/files/ENCFF000QKD/@@download/ENCFF000QKD.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF000QKE bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 635311224 Richard Myers, HAIB b421f68480e06961bfc95efd8ec9557b https://www.encodeproject.org/files/ENCFF000QKE/@@download/ENCFF000QKE.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF000QKG bigWig raw signal ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 26670095 Richard Myers, HAIB 8c353db96c88331df83bd2c5831cd1d7 https://www.encodeproject.org/files/ENCFF000QKG/@@download/ENCFF000QKG.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF000QKH bigWig raw signal ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 4443884 Richard Myers, HAIB 7d1424ec500c2406e16aeda1a6dfa9fa https://www.encodeproject.org/files/ENCFF000QKH/@@download/ENCFF000QKH.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF000QKJ fastq reads ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 277768003 Richard Myers, HAIB 5071dc49ea385d8ffcde4c3d0e3e7e91 https://www.encodeproject.org/files/ENCFF000QKJ/@@download/ENCFF000QKJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF000QKK fastq reads ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 657890473 Richard Myers, HAIB fea12e86b688cfb06465f1c1d4d6bbd5 https://www.encodeproject.org/files/ENCFF000QKK/@@download/ENCFF000QKK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF001UMD bed broadPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 120611 Richard Myers, HAIB ef9106ed675a4543afaeaa68cad36c2a https://www.encodeproject.org/files/ENCFF001UMD/@@download/ENCFF001UMD.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF001UME bed broadPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 383870 Richard Myers, HAIB 646e15a4bc1fecc7b9e6971f6d8bfbae https://www.encodeproject.org/files/ENCFF001UME/@@download/ENCFF001UME.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF002CMW bed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 255495 ENCODE Consortium Analysis Working Group ac07a1c66425f00441835fc502af0c71 https://www.encodeproject.org/files/ENCFF002CMW/@@download/ENCFF002CMW.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF524QRO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE ENCFF002CMW 518952 ENCODE Consortium 9c1a6b186e316b1742054273f548508d https://www.encodeproject.org/files/ENCFF524QRO/@@download/ENCFF524QRO.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF543BDT bam unfiltered alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKJ, ENCFF643CGH 352412702 ENCODE Processing Pipeline 4c3d6367b9457ca5bbfaee3cdeef9c8b https://www.encodeproject.org/files/ENCFF543BDT/@@download/ENCFF543BDT.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF044TAL bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKJ, ENCFF643CGH 169814671 ENCODE Processing Pipeline c9b5f63070b8e5e1254c02bfb40d97d2 https://www.encodeproject.org/files/ENCFF044TAL/@@download/ENCFF044TAL.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF782TYI bam unfiltered alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKK, ENCFF643CGH 771561431 ENCODE Processing Pipeline a5f350707d59af5e195cd5df64342ae6 https://www.encodeproject.org/files/ENCFF782TYI/@@download/ENCFF782TYI.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF651HPM bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKK, ENCFF643CGH 270423140 ENCODE Processing Pipeline 97698697152df239505bc2c050dffd49 https://www.encodeproject.org/files/ENCFF651HPM/@@download/ENCFF651HPM.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF397WYE bam unfiltered alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKJ, ENCFF807MUK 353138347 ENCODE Processing Pipeline b75e326fd6f3640c8727cddfe26b302b https://www.encodeproject.org/files/ENCFF397WYE/@@download/ENCFF397WYE.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF374QJL bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKJ, ENCFF807MUK 166901482 ENCODE Processing Pipeline 641987233cf859928d06dd5e7306e296 https://www.encodeproject.org/files/ENCFF374QJL/@@download/ENCFF374QJL.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF985HYK bam unfiltered alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKK, ENCFF807MUK 770939603 ENCODE Processing Pipeline d2b6792e370fd3f88d9aadc90d3d9c9f https://www.encodeproject.org/files/ENCFF985HYK/@@download/ENCFF985HYK.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF974OCA bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKK, ENCFF807MUK 270634558 ENCODE Processing Pipeline ad27b4d06443569067b685bffac04e51 https://www.encodeproject.org/files/ENCFF974OCA/@@download/ENCFF974OCA.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF075WWP bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF651HPM, ENCFF772PJM 217958466 ENCODE Processing Pipeline 0599efd0f47ec55ab5449832f86b375c https://www.encodeproject.org/files/ENCFF075WWP/@@download/ENCFF075WWP.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF167RTT bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044TAL, ENCFF772PJM 154449335 ENCODE Processing Pipeline 28a511f6c969f0e46642fddaa7b76154 https://www.encodeproject.org/files/ENCFF167RTT/@@download/ENCFF167RTT.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF315PCN bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044TAL, ENCFF651HPM, ENCFF772PJM 206277255 ENCODE Processing Pipeline 798e2d6d7705e9a2785d6a21ea6bf67a https://www.encodeproject.org/files/ENCFF315PCN/@@download/ENCFF315PCN.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF654LSD bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044TAL, ENCFF651HPM, ENCFF772PJM 176061920 ENCODE Processing Pipeline ca038cfeb126a15a9a1d33988513ff2e https://www.encodeproject.org/files/ENCFF654LSD/@@download/ENCFF654LSD.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF381ZVE bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF651HPM, ENCFF772PJM 3454051 ENCODE Processing Pipeline f078899340498ea6c7478561f691dc3f https://www.encodeproject.org/files/ENCFF381ZVE/@@download/ENCFF381ZVE.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF371NVU bed narrowPeak conservative idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100YJH, ENCFF203XPP, ENCFF381ZVE, ENCFF419RSJ 79747 ENCODE Processing Pipeline 629c951b387e804bb8e8dff059b38051 https://www.encodeproject.org/files/ENCFF371NVU/@@download/ENCFF371NVU.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF160WGC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF371NVU 192553 ENCODE Processing Pipeline 3966947165825253d5f77f45f3681967 https://www.encodeproject.org/files/ENCFF160WGC/@@download/ENCFF160WGC.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF439VDJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF953BTB 518102 ENCODE Processing Pipeline e70628eaa6d699e5c06772e73636daec https://www.encodeproject.org/files/ENCFF439VDJ/@@download/ENCFF439VDJ.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF203XPP bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044TAL, ENCFF651HPM, ENCFF772PJM 4446136 ENCODE Processing Pipeline ea2672c46404418e5d6d7a259ed4b96e https://www.encodeproject.org/files/ENCFF203XPP/@@download/ENCFF203XPP.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF469QBZ bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044TAL, ENCFF772PJM 78425312 ENCODE Processing Pipeline f1953f9b61f0b23a87db45c0939e66c5 https://www.encodeproject.org/files/ENCFF469QBZ/@@download/ENCFF469QBZ.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF100YJH bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044TAL, ENCFF772PJM 1789536 ENCODE Processing Pipeline fbf283ba506834372e630238b384c39e https://www.encodeproject.org/files/ENCFF100YJH/@@download/ENCFF100YJH.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF570LZA bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF381ZVE 7632821 ENCODE Processing Pipeline 8c5083c0a7eeb26abfec2207a0c75944 https://www.encodeproject.org/files/ENCFF570LZA/@@download/ENCFF570LZA.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF924PLW bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF203XPP 9883640 ENCODE Processing Pipeline 67150ef851e08c0dbad9e602351b591b https://www.encodeproject.org/files/ENCFF924PLW/@@download/ENCFF924PLW.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF953BTB bed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100YJH, ENCFF203XPP, ENCFF381ZVE, ENCFF419RSJ 274304 ENCODE Processing Pipeline 5e0d8c3af8f5ee9de64681feb5dc4bfe https://www.encodeproject.org/files/ENCFF953BTB/@@download/ENCFF953BTB.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF674DGV bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF651HPM, ENCFF772PJM 109602790 ENCODE Processing Pipeline 0c707e906d7c2ff0156d056bbe355c5c https://www.encodeproject.org/files/ENCFF674DGV/@@download/ENCFF674DGV.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF821EZE bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100YJH 3755275 ENCODE Processing Pipeline d69bcff8a3f5d5e0e5755bb0f185ac36 https://www.encodeproject.org/files/ENCFF821EZE/@@download/ENCFF821EZE.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance, insufficient read depth ENCFF000PTR bam alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000PUD 1261831397 Richard Myers, HAIB 3ae697bf89747cc6012bc25337100747 https://www.encodeproject.org/files/ENCFF000PTR/@@download/ENCFF000PTR.bam hg19 archived low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000PTS bigBed broadPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UIM 430246 Richard Myers, HAIB 0b6736a5c26220aca5ba2a9399bd8de6 https://www.encodeproject.org/files/ENCFF000PTS/@@download/ENCFF000PTS.bigBed hg19 archived low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000PTT bigBed broadPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UIN 172838 Richard Myers, HAIB af8dce0bc83d3746644e0d308adb457c https://www.encodeproject.org/files/ENCFF000PTT/@@download/ENCFF000PTT.bigBed hg19 archived low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000PTW bam alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000PUO 2854102605 Richard Myers, HAIB 4ff9e7f88cba8b113d622703ff047edd https://www.encodeproject.org/files/ENCFF000PTW/@@download/ENCFF000PTW.bam hg19 archived low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000PTX bigWig raw signal ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 1 161257878 Richard Myers, HAIB d7966666a47fa4772b1955dfba559c96 https://www.encodeproject.org/files/ENCFF000PTX/@@download/ENCFF000PTX.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000PTY bigWig raw signal ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 1 292845720 Richard Myers, HAIB c6b21ce9a7c6608cc3be252cc4a0f508 https://www.encodeproject.org/files/ENCFF000PTY/@@download/ENCFF000PTY.bigWig hg19 archived low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF000PUD fastq reads ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1341270925 Richard Myers, HAIB 24f36725100807d93dae936c4516afc4 https://www.encodeproject.org/files/ENCFF000PUD/@@download/ENCFF000PUD.fastq.gz HiSeq 2000 /files/ENCFF000PVC/ released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000PUO fastq reads ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 2949869483 Richard Myers, HAIB 8a2b4752aa3ad78fa88f20c381096b3e https://www.encodeproject.org/files/ENCFF000PUO/@@download/ENCFF000PUO.fastq.gz HiSeq 2000 /files/ENCFF000PVC/ released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF001UIM bed broadPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 1 233961 Richard Myers, HAIB b70cd8afa1c02c07f2638d207ca890c3 https://www.encodeproject.org/files/ENCFF001UIM/@@download/ENCFF001UIM.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF001UIN bed broadPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 1 74994 Richard Myers, HAIB 032c100983c26c80f0da3b377b52a077 https://www.encodeproject.org/files/ENCFF001UIN/@@download/ENCFF001UIN.bed.gz hg19 archived low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance ENCFF027UBI bam unfiltered alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUD, ENCFF643CGH 1351598728 ENCODE Processing Pipeline d8d7600c82f61eea76f9121fa39f8465 https://www.encodeproject.org/files/ENCFF027UBI/@@download/ENCFF027UBI.bam GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF704CFG bam unfiltered alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUO, ENCFF643CGH 3083905875 ENCODE Processing Pipeline d0fff8ae1e7960c876d3490f40a5b0f6 https://www.encodeproject.org/files/ENCFF704CFG/@@download/ENCFF704CFG.bam GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF058RXV bam alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUD, ENCFF643CGH 960102167 ENCODE Processing Pipeline 59f1a0d6b8cf68a5b420058e8ee3c57d https://www.encodeproject.org/files/ENCFF058RXV/@@download/ENCFF058RXV.bam GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF372SGD bam alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUO, ENCFF643CGH 2007975392 ENCODE Processing Pipeline e738d0443104a9c32c945b61aee4c9b4 https://www.encodeproject.org/files/ENCFF372SGD/@@download/ENCFF372SGD.bam GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF321HSZ bam unfiltered alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUD, ENCFF807MUK 1348066321 ENCODE Processing Pipeline 984f394cc0584e5f0e00048b8d68e7ac https://www.encodeproject.org/files/ENCFF321HSZ/@@download/ENCFF321HSZ.bam hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF027GJA bam alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000PUD, ENCFF807MUK 960290199 ENCODE Processing Pipeline 89fd5f4b7dc18f2dceb31934b30a8aef https://www.encodeproject.org/files/ENCFF027GJA/@@download/ENCFF027GJA.bam hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF296RQD bam unfiltered alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUO, ENCFF807MUK 3071655439 ENCODE Processing Pipeline 4bb3e3b3566c8f97ce9706986d771c8e https://www.encodeproject.org/files/ENCFF296RQD/@@download/ENCFF296RQD.bam hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF656QRB bam alignments ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000PUO, ENCFF807MUK 2008057553 ENCODE Processing Pipeline 466d6fd64590e1facd80e73bd440312a https://www.encodeproject.org/files/ENCFF656QRB/@@download/ENCFF656QRB.bam hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF251TEL bigWig fold change over control ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF656QRB, ENCFF880DIZ 566000333 ENCODE Processing Pipeline 3d1b52df530b710a90d7625f2d0678bd https://www.encodeproject.org/files/ENCFF251TEL/@@download/ENCFF251TEL.bigWig hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF427PNP bed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF027GJA, ENCFF880DIZ 5377648 ENCODE Processing Pipeline 8ead2387144ed550b5e379831425b0f0 https://www.encodeproject.org/files/ENCFF427PNP/@@download/ENCFF427PNP.bed.gz hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF603MCO bed narrowPeak optimal idr thresholded peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF152FPH, ENCFF427PNP, ENCFF955CMQ 250253 ENCODE Processing Pipeline bd65a9b594a044fa6e72d0baca077e59 https://www.encodeproject.org/files/ENCFF603MCO/@@download/ENCFF603MCO.bed.gz hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF152FPH bed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF656QRB, ENCFF880DIZ 4040861 ENCODE Processing Pipeline 0cae1d7e990f72777ddc0e9fab1cd9a6 https://www.encodeproject.org/files/ENCFF152FPH/@@download/ENCFF152FPH.bed.gz hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF376FYP bigBed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF427PNP 13238191 ENCODE Processing Pipeline 8a76cfbcc2e6229430e4c31c944433b7 https://www.encodeproject.org/files/ENCFF376FYP/@@download/ENCFF376FYP.bigBed hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF478GJC bigBed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF955CMQ 11233636 ENCODE Processing Pipeline 7ae01c26df18c28fa4efaa92e0ad2c5d https://www.encodeproject.org/files/ENCFF478GJC/@@download/ENCFF478GJC.bigBed hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF975OED bigBed narrowPeak optimal idr thresholded peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF603MCO 515947 ENCODE Processing Pipeline c9c3a976e43c317a3d4a1484db2e5e4f https://www.encodeproject.org/files/ENCFF975OED/@@download/ENCFF975OED.bigBed hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF515RRQ bigWig signal p-value ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF027GJA, ENCFF880DIZ 487999195 ENCODE Processing Pipeline efd8e3f3c9506cb93dce9dcec91daa45 https://www.encodeproject.org/files/ENCFF515RRQ/@@download/ENCFF515RRQ.bigWig hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF624YMF bigWig fold change over control ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF027GJA, ENCFF880DIZ 382109758 ENCODE Processing Pipeline 2d6a5c6227d175121e85d5ab7c1436e3 https://www.encodeproject.org/files/ENCFF624YMF/@@download/ENCFF624YMF.bigWig hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF874APL bigWig fold change over control ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF027GJA, ENCFF656QRB, ENCFF880DIZ 821512370 ENCODE Processing Pipeline ce31b90dc1a989797394ccbd25e73c9e https://www.encodeproject.org/files/ENCFF874APL/@@download/ENCFF874APL.bigWig hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF473PQT bigBed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF152FPH 10769930 ENCODE Processing Pipeline 1d5804ee20afb045ef7e1cec0d570093 https://www.encodeproject.org/files/ENCFF473PQT/@@download/ENCFF473PQT.bigBed hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF633YMF bigWig signal p-value ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF027GJA, ENCFF656QRB, ENCFF880DIZ 508823325 ENCODE Processing Pipeline 5c3a36d9c6cc678ffe3e659ee4f0ddf3 https://www.encodeproject.org/files/ENCFF633YMF/@@download/ENCFF633YMF.bigWig hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF939MDW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF128UOK 248587 ENCODE Processing Pipeline c497c7820cce5a19ffb1e54d482c97d3 https://www.encodeproject.org/files/ENCFF939MDW/@@download/ENCFF939MDW.bigBed hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF472OID bigWig signal p-value ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF656QRB, ENCFF880DIZ 494952535 ENCODE Processing Pipeline 1dfa92d412f8844479f37434747d93b9 https://www.encodeproject.org/files/ENCFF472OID/@@download/ENCFF472OID.bigWig hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF955CMQ bed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF027GJA, ENCFF656QRB, ENCFF880DIZ 5556606 ENCODE Processing Pipeline 5fe02a0847524729513ae45908033a6e https://www.encodeproject.org/files/ENCFF955CMQ/@@download/ENCFF955CMQ.bed.gz hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF128UOK bed narrowPeak conservative idr thresholded peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF152FPH, ENCFF427PNP, ENCFF955CMQ 115362 ENCODE Processing Pipeline fc1dabcad93b233f94a8f7cb765f4135 https://www.encodeproject.org/files/ENCFF128UOK/@@download/ENCFF128UOK.bed.gz hg19 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF342DOS bigWig signal p-value ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF058RXV, ENCFF895MWF 455823702 ENCODE Processing Pipeline 0666ba5c53ebcee9a92ef43a0c219e83 https://www.encodeproject.org/files/ENCFF342DOS/@@download/ENCFF342DOS.bigWig GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF701VWM bigWig signal p-value ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF372SGD, ENCFF895MWF 492956483 ENCODE Processing Pipeline d3ff899bcbf99e4f50d63aaef4933104 https://www.encodeproject.org/files/ENCFF701VWM/@@download/ENCFF701VWM.bigWig GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF055CCJ bed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF372SGD, ENCFF895MWF 4016601 ENCODE Processing Pipeline 65dd783e67a5e408157dccbb15957c17 https://www.encodeproject.org/files/ENCFF055CCJ/@@download/ENCFF055CCJ.bed.gz GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF262UHE bigWig fold change over control ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF058RXV, ENCFF895MWF 389270645 ENCODE Processing Pipeline a491eeb4bc1b41a6041b5c51cb3ee7fd https://www.encodeproject.org/files/ENCFF262UHE/@@download/ENCFF262UHE.bigWig GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF739FQY bigWig fold change over control ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF372SGD, ENCFF895MWF 560460722 ENCODE Processing Pipeline 4351b7246c696f7ac73ee46a96d265e2 https://www.encodeproject.org/files/ENCFF739FQY/@@download/ENCFF739FQY.bigWig GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF900WML bigWig signal p-value ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF058RXV, ENCFF372SGD, ENCFF895MWF 505142939 ENCODE Processing Pipeline 80d1032f60ca647c2c5c21eee775f6fc https://www.encodeproject.org/files/ENCFF900WML/@@download/ENCFF900WML.bigWig GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF987PBN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF839LPE 514962 ENCODE Processing Pipeline da87943c2049503c65f93fe440795d74 https://www.encodeproject.org/files/ENCFF987PBN/@@download/ENCFF987PBN.bigBed GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF496DGW bigWig fold change over control ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF058RXV, ENCFF372SGD, ENCFF895MWF 806775024 ENCODE Processing Pipeline ba18e780b613fbcdddc2f32438522cbf https://www.encodeproject.org/files/ENCFF496DGW/@@download/ENCFF496DGW.bigWig GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF655MJA bed narrowPeak conservative idr thresholded peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF043DRH, ENCFF055CCJ, ENCFF080YLK, ENCFF419RSJ 117453 ENCODE Processing Pipeline ac9c4ab3ac9a0c6acc5627f847100fa0 https://www.encodeproject.org/files/ENCFF655MJA/@@download/ENCFF655MJA.bed.gz GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF043DRH bed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF058RXV, ENCFF895MWF 5381224 ENCODE Processing Pipeline 2cb9222770b96c9c7bac32f3bca9178b https://www.encodeproject.org/files/ENCFF043DRH/@@download/ENCFF043DRH.bed.gz GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF428IKJ bigBed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1 ENCFF043DRH 13242669 ENCODE Processing Pipeline a63a1aa7b25cea88896bb6258f40ff9d https://www.encodeproject.org/files/ENCFF428IKJ/@@download/ENCFF428IKJ.bigBed GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF181ICQ bigBed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 2 ENCFF055CCJ 10739219 ENCODE Processing Pipeline 2b8123d12525d64b8a826a3b9bf2296d https://www.encodeproject.org/files/ENCFF181ICQ/@@download/ENCFF181ICQ.bigBed GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF456YXP bigBed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF080YLK 11245087 ENCODE Processing Pipeline adde947d81e907ac31d6a14cb402d1d4 https://www.encodeproject.org/files/ENCFF456YXP/@@download/ENCFF456YXP.bigBed GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF927AZD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF655MJA 252154 ENCODE Processing Pipeline 2a4c971de83a3c5af439913080d0ed17 https://www.encodeproject.org/files/ENCFF927AZD/@@download/ENCFF927AZD.bigBed GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF839LPE bed narrowPeak optimal idr thresholded peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF043DRH, ENCFF055CCJ, ENCFF080YLK, ENCFF419RSJ 250154 ENCODE Processing Pipeline 247a050b172bb5b0394cb4e78ca69a5f https://www.encodeproject.org/files/ENCFF839LPE/@@download/ENCFF839LPE.bed.gz GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF080YLK bed narrowPeak peaks ENCSR000BTF ChIP-seq EFO:0002793 HL-60 immortalized cell line adult female 36 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF058RXV, ENCFF372SGD, ENCFF895MWF 5553311 ENCODE Processing Pipeline f3554f2cc96f7d110946adedb2820299 https://www.encodeproject.org/files/ENCFF080YLK/@@download/ENCFF080YLK.bed.gz GRCh38 released low read depth biological replicates with identical biosample insufficient replicate concordance ENCFF000QLH bam alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000QLT 1229980445 Richard Myers, HAIB 0eb5b395e1819a0a8c1a36934a5dc999 https://www.encodeproject.org/files/ENCFF000QLH/@@download/ENCFF000QLH.bam hg19 archived low read depth, mild to moderate bottlenecking ENCFF000QLI bigBed broadPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UML 983596 Richard Myers, HAIB 622a2e6b67da764483613bc099858e2c https://www.encodeproject.org/files/ENCFF000QLI/@@download/ENCFF000QLI.bigBed hg19 archived low read depth, mild to moderate bottlenecking ENCFF000QLJ bigBed broadPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UMN 1022040 Richard Myers, HAIB a2d69f406bd28e7285be22cffaa421f7 https://www.encodeproject.org/files/ENCFF000QLJ/@@download/ENCFF000QLJ.bigBed hg19 archived low read depth, mild to moderate bottlenecking ENCFF000QLK bam alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QLW 1823923002 Richard Myers, HAIB f1dbbf16bbfc244caaa19832c75fee3c https://www.encodeproject.org/files/ENCFF000QLK/@@download/ENCFF000QLK.bam hg19 archived low read depth, mild to moderate bottlenecking ENCFF000QLM bigWig raw signal ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 1 212726627 Richard Myers, HAIB 0eb9a3add62df048523cde20bab92eca https://www.encodeproject.org/files/ENCFF000QLM/@@download/ENCFF000QLM.bigWig hg19 archived low read depth, mild to moderate bottlenecking missing derived_from ENCFF000QLN bigWig raw signal ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 1 111768382 Richard Myers, HAIB ebabd699002619a7f20341c054e62d16 https://www.encodeproject.org/files/ENCFF000QLN/@@download/ENCFF000QLN.bigWig hg19 archived low read depth, mild to moderate bottlenecking missing derived_from ENCFF000QLT fastq reads ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1324143320 Richard Myers, HAIB 8a578ac4f7bff6bc953834e7a15f7daa https://www.encodeproject.org/files/ENCFF000QLT/@@download/ENCFF000QLT.fastq.gz HiSeq 2000 /files/ENCFF000QQJ/ released low read depth, mild to moderate bottlenecking ENCFF000QLW fastq reads ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1927951670 Richard Myers, HAIB 377ea32d9cd8f4ae9c2b9cae3d49df3c https://www.encodeproject.org/files/ENCFF000QLW/@@download/ENCFF000QLW.fastq.gz HiSeq 2000 /files/ENCFF000QQI/ released low read depth, mild to moderate bottlenecking ENCFF001UML bed broadPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 1 636381 Richard Myers, HAIB fa558ccebbb598dfe04b77323b7f824d https://www.encodeproject.org/files/ENCFF001UML/@@download/ENCFF001UML.bed.gz hg19 archived low read depth, mild to moderate bottlenecking missing derived_from ENCFF001UMN bed broadPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 1 639275 Richard Myers, HAIB ef2a231e111392005b60548a3e312265 https://www.encodeproject.org/files/ENCFF001UMN/@@download/ENCFF001UMN.bed.gz hg19 archived low read depth, mild to moderate bottlenecking missing derived_from ENCFF118KBU bam unfiltered alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QLT, ENCFF643CGH 1302072974 ENCODE Processing Pipeline a12040c22a1ac10687a2a732d63107dd https://www.encodeproject.org/files/ENCFF118KBU/@@download/ENCFF118KBU.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF796FNS bam unfiltered alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QLT, ENCFF807MUK 1299297146 ENCODE Processing Pipeline 2ed1bd6b7810b86026cc487588cccb71 https://www.encodeproject.org/files/ENCFF796FNS/@@download/ENCFF796FNS.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF753KJD bam unfiltered alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QLW, ENCFF643CGH 1945711944 ENCODE Processing Pipeline 6f9c2ff1563b31b4db859cd0a86dcfc1 https://www.encodeproject.org/files/ENCFF753KJD/@@download/ENCFF753KJD.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF433JUQ bam unfiltered alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QLW, ENCFF807MUK 1941018765 ENCODE Processing Pipeline 1885539778ffeac9e97fa7ca29af688c https://www.encodeproject.org/files/ENCFF433JUQ/@@download/ENCFF433JUQ.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF335UKS bam alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QLT, ENCFF807MUK 760013781 ENCODE Processing Pipeline f0d969e8f574012e6fb4afa6da702e7b https://www.encodeproject.org/files/ENCFF335UKS/@@download/ENCFF335UKS.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF049OXC bam alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000QLT, ENCFF643CGH 759570834 ENCODE Processing Pipeline 8cc6a1993806b54c68f539bcb8c0a15f https://www.encodeproject.org/files/ENCFF049OXC/@@download/ENCFF049OXC.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF959AJO bam alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QLW, ENCFF643CGH 1275941725 ENCODE Processing Pipeline 08b8ca0b6ef292c4b2645cb54fbffebc https://www.encodeproject.org/files/ENCFF959AJO/@@download/ENCFF959AJO.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF754DME bam alignments ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000QLW, ENCFF807MUK 1276541128 ENCODE Processing Pipeline 84826ea47b7d83ca8e1da1915c50ef73 https://www.encodeproject.org/files/ENCFF754DME/@@download/ENCFF754DME.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF041CAY bigWig signal p-value ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF335UKS, ENCFF479YGR, ENCFF719RCX, ENCFF754DME 929188648 ENCODE Processing Pipeline d93e0e778ca243aecca21df4f7f3afb3 https://www.encodeproject.org/files/ENCFF041CAY/@@download/ENCFF041CAY.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF298KPS bigWig signal p-value ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF479YGR, ENCFF719RCX, ENCFF754DME 785811472 ENCODE Processing Pipeline 1decd943ea3648444f30d0e483636a7d https://www.encodeproject.org/files/ENCFF298KPS/@@download/ENCFF298KPS.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF465SYN bigWig signal p-value ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF335UKS, ENCFF719RCX 461246592 ENCODE Processing Pipeline 447cbb75d888dde25906a6de46df9c5d https://www.encodeproject.org/files/ENCFF465SYN/@@download/ENCFF465SYN.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF430DVP bed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF139XSQ, ENCFF927WZT, ENCFF959AJO 5251909 ENCODE Processing Pipeline dd29ab82ef96d4b066fb6e1b987ac9af https://www.encodeproject.org/files/ENCFF430DVP/@@download/ENCFF430DVP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF942TCG bed narrowPeak optimal idr thresholded peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF430DVP, ENCFF483SPH, ENCFF889OQM 909194 ENCODE Processing Pipeline df8e06eabcef14bb91558c96f28066d6 https://www.encodeproject.org/files/ENCFF942TCG/@@download/ENCFF942TCG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF048DWM bigWig signal p-value ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF139XSQ, ENCFF927WZT, ENCFF959AJO 618699954 ENCODE Processing Pipeline 298d4eb05bf64b06f085767f561e61ce https://www.encodeproject.org/files/ENCFF048DWM/@@download/ENCFF048DWM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF417XYW bigWig fold change over control ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF139XSQ, ENCFF927WZT, ENCFF959AJO 574500239 ENCODE Processing Pipeline bdb19c9c2b0e32c306504d5d5a2be760 https://www.encodeproject.org/files/ENCFF417XYW/@@download/ENCFF417XYW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF616XOF bigBed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF664CSQ 11709754 ENCODE Processing Pipeline af28eb0617e468f43c2781e181f743d3 https://www.encodeproject.org/files/ENCFF616XOF/@@download/ENCFF616XOF.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF444IOW bed narrowPeak conservative idr thresholded peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF664CSQ, ENCFF762LDF, ENCFF768KKE 877515 ENCODE Processing Pipeline 8776eae2fba762ef78261a690b14b4e8 https://www.encodeproject.org/files/ENCFF444IOW/@@download/ENCFF444IOW.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF491LKK bigWig fold change over control ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF049OXC, ENCFF139XSQ 298023103 ENCODE Processing Pipeline 4ef4ba389abdab7884e82aa007521d22 https://www.encodeproject.org/files/ENCFF491LKK/@@download/ENCFF491LKK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF586KIH bed narrowPeak optimal idr thresholded peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF664CSQ, ENCFF762LDF, ENCFF768KKE 916340 ENCODE Processing Pipeline 5a8e504b171a26058efc3a830eef1183 https://www.encodeproject.org/files/ENCFF586KIH/@@download/ENCFF586KIH.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF324CIU bigWig signal p-value ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF049OXC, ENCFF139XSQ 400586099 ENCODE Processing Pipeline a28cd78c2e3b1355902c45a2d9e60c3c https://www.encodeproject.org/files/ENCFF324CIU/@@download/ENCFF324CIU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF707ROR bigWig fold change over control ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF335UKS, ENCFF719RCX 299468995 ENCODE Processing Pipeline 04dc031b0fb6df641ee15ab023bc6611 https://www.encodeproject.org/files/ENCFF707ROR/@@download/ENCFF707ROR.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF762LDF bed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF335UKS, ENCFF719RCX 4135581 ENCODE Processing Pipeline 4fd1ec871d2c9fd0acf45b090d6098f8 https://www.encodeproject.org/files/ENCFF762LDF/@@download/ENCFF762LDF.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF483SPH bed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF049OXC, ENCFF139XSQ 4132264 ENCODE Processing Pipeline 8713605beaae5aef9f132b26f8650e9b https://www.encodeproject.org/files/ENCFF483SPH/@@download/ENCFF483SPH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF118FLA bigWig fold change over control ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF479YGR, ENCFF719RCX, ENCFF754DME 571721859 ENCODE Processing Pipeline 6c6a05fbd0394c06a04ebb0ab7083f04 https://www.encodeproject.org/files/ENCFF118FLA/@@download/ENCFF118FLA.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF516HJR bigWig signal p-value ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF049OXC, ENCFF139XSQ, ENCFF927WZT, ENCFF959AJO 735759889 ENCODE Processing Pipeline 83deddc7ade7a2fd494dde3958f7e89a https://www.encodeproject.org/files/ENCFF516HJR/@@download/ENCFF516HJR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF812KNI bigWig fold change over control ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF335UKS, ENCFF479YGR, ENCFF719RCX, ENCFF754DME 785856135 ENCODE Processing Pipeline 53af4436ec22730655f90fcc2fb93277 https://www.encodeproject.org/files/ENCFF812KNI/@@download/ENCFF812KNI.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF400VSS bigBed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF762LDF 8218849 ENCODE Processing Pipeline 893cfa47b8d1d1a8e046441f2e6d8302 https://www.encodeproject.org/files/ENCFF400VSS/@@download/ENCFF400VSS.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF181YWG bigBed narrowPeak conservative idr thresholded peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF444IOW 1562444 ENCODE Processing Pipeline 2b9456e01c5e12958683f9ec920b4c64 https://www.encodeproject.org/files/ENCFF181YWG/@@download/ENCFF181YWG.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF991NDB bigWig fold change over control ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF049OXC, ENCFF139XSQ, ENCFF927WZT, ENCFF959AJO 781606636 ENCODE Processing Pipeline 36909a2987a7d3b5237402bc0f7f3419 https://www.encodeproject.org/files/ENCFF991NDB/@@download/ENCFF991NDB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF664CSQ bed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF335UKS, ENCFF479YGR, ENCFF719RCX, ENCFF754DME 5589493 ENCODE Processing Pipeline cc57ed24ee5f77c54dae094d7321fca1 https://www.encodeproject.org/files/ENCFF664CSQ/@@download/ENCFF664CSQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF282OIK bigBed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF768KKE 11301968 ENCODE Processing Pipeline 1481ae62c79a91b8fb2fc9251244a4d3 https://www.encodeproject.org/files/ENCFF282OIK/@@download/ENCFF282OIK.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF543URL bigBed narrowPeak optimal idr thresholded peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF586KIH 1617023 ENCODE Processing Pipeline 66be12fbcbbec98c5f12b3bdf7545714 https://www.encodeproject.org/files/ENCFF543URL/@@download/ENCFF543URL.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF889OQM bed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF049OXC, ENCFF139XSQ, ENCFF927WZT, ENCFF959AJO 5568774 ENCODE Processing Pipeline 4b86220dd0663e53c2654237d5b3c86f https://www.encodeproject.org/files/ENCFF889OQM/@@download/ENCFF889OQM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF155REN bigBed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF430DVP 11252857 ENCODE Processing Pipeline b291cf27c1ec6c5e6be72b1d4230059a https://www.encodeproject.org/files/ENCFF155REN/@@download/ENCFF155REN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF842TCJ bigBed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF889OQM 11691671 ENCODE Processing Pipeline fe64396fdc95e5f9934bed0c3ab97155 https://www.encodeproject.org/files/ENCFF842TCJ/@@download/ENCFF842TCJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF204EYH bigBed narrowPeak conservative idr thresholded peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF409MXQ 1571879 ENCODE Processing Pipeline ac48b33e56e147f3df1d1d0ba3d8396a https://www.encodeproject.org/files/ENCFF204EYH/@@download/ENCFF204EYH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF694SEI bigBed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF483SPH 8231615 ENCODE Processing Pipeline d32cad0275e0685d41d7ad95150bca3d https://www.encodeproject.org/files/ENCFF694SEI/@@download/ENCFF694SEI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF881HZW bigBed narrowPeak optimal idr thresholded peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF942TCG 1607140 ENCODE Processing Pipeline 686f8407db416638d16dec747def3fd1 https://www.encodeproject.org/files/ENCFF881HZW/@@download/ENCFF881HZW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF409MXQ bed narrowPeak conservative idr thresholded peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF430DVP, ENCFF483SPH, ENCFF889OQM 883361 ENCODE Processing Pipeline 8f0c57486d0463a460d39ffbe63d7dc8 https://www.encodeproject.org/files/ENCFF409MXQ/@@download/ENCFF409MXQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF768KKE bed narrowPeak peaks ENCSR000AHD ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF479YGR, ENCFF719RCX, ENCFF754DME 5341806 ENCODE Processing Pipeline d74ba6964064a6af20aa766c161699f4 https://www.encodeproject.org/files/ENCFF768KKE/@@download/ENCFF768KKE.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF000QIV bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 546887468 Richard Myers, HAIB f1a953d67a080ad4042eb446aab5c1c7 https://www.encodeproject.org/files/ENCFF000QIV/@@download/ENCFF000QIV.bam hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF000QIX bigBed broadPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001ULV 450165 Richard Myers, HAIB b00a1c3ecfe60a7d292c55370621857d https://www.encodeproject.org/files/ENCFF000QIX/@@download/ENCFF000QIX.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF000QIZ bigBed broadPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001ULW 179975 Richard Myers, HAIB 3032b45c8496ff5006f2eb26ee621fe8 https://www.encodeproject.org/files/ENCFF000QIZ/@@download/ENCFF000QIZ.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF000QJA bigWig raw signal ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 1 297408871 Richard Myers, HAIB 09b19ccbfbbddcaead62be5e0e390904 https://www.encodeproject.org/files/ENCFF000QJA/@@download/ENCFF000QJA.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF000QJB bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QJK 1687239678 Richard Myers, HAIB ea8f0a0159db423e13d79ada32d41d44 https://www.encodeproject.org/files/ENCFF000QJB/@@download/ENCFF000QJB.bam hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF000QJC bigWig raw signal ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 90133224 Richard Myers, HAIB 29746fb0e97345f44f73ee46ad82f884 https://www.encodeproject.org/files/ENCFF000QJC/@@download/ENCFF000QJC.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF000QJH fastq reads ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 36 single-ended 513783371 Richard Myers, HAIB fc790de64236167c774a1e5a918bfaf7 https://www.encodeproject.org/files/ENCFF000QJH/@@download/ENCFF000QJH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF001RVN/ released inconsistent control read length, borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF000QJK fastq reads ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 1 36 single-ended 1617203312 Richard Myers, HAIB 3b6f19d4bda8b74d005ba11575d306ea https://www.encodeproject.org/files/ENCFF000QJK/@@download/ENCFF000QJK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF001ULV bed broadPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 1 260642 Richard Myers, HAIB 0a69b06cf10e71e76523e2eb49d10009 https://www.encodeproject.org/files/ENCFF001ULV/@@download/ENCFF001ULV.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF001ULW bed broadPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 75553 Richard Myers, HAIB 93e116c0c7bd0deacafd7d88bfcd5f9a https://www.encodeproject.org/files/ENCFF001ULW/@@download/ENCFF001ULW.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF482NNF bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000QJH, ENCFF807MUK 395595102 ENCODE Processing Pipeline e151b5c765218c06df0a9d4c8f0fe716 https://www.encodeproject.org/files/ENCFF482NNF/@@download/ENCFF482NNF.bam hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF275STF bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QJK, ENCFF807MUK 1143339499 ENCODE Processing Pipeline b1e4b57b59b9fc230d9c59e49b4790a5 https://www.encodeproject.org/files/ENCFF275STF/@@download/ENCFF275STF.bam hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF906MHJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF858QMI 472857 ENCODE Processing Pipeline b3a7537ff806e5e9484a22de43811ec3 https://www.encodeproject.org/files/ENCFF906MHJ/@@download/ENCFF906MHJ.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF112GUK bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF275STF, ENCFF522HDC 621497794 ENCODE Processing Pipeline 484cdecdae05d5e61d09dac9ecd84a1c https://www.encodeproject.org/files/ENCFF112GUK/@@download/ENCFF112GUK.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF447SUC bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF275STF, ENCFF468ZDX, ENCFF482NNF, ENCFF522HDC 1032639188 ENCODE Processing Pipeline ef0b96796a33b6366832f825f4ac1cd1 https://www.encodeproject.org/files/ENCFF447SUC/@@download/ENCFF447SUC.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF140YDA bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF275STF, ENCFF522HDC 6352142 ENCODE Processing Pipeline 8b9ed27f9e33de801da5affaeec39691 https://www.encodeproject.org/files/ENCFF140YDA/@@download/ENCFF140YDA.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF721WZY bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF275STF, ENCFF468ZDX, ENCFF482NNF, ENCFF522HDC 6846560 ENCODE Processing Pipeline e66f5d29cd95a43e2d6f62e5a3bafe37 https://www.encodeproject.org/files/ENCFF721WZY/@@download/ENCFF721WZY.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF848EGA bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF468ZDX, ENCFF482NNF 485755478 ENCODE Processing Pipeline d83560aa1e49624aa0b6fb2e5df0ac93 https://www.encodeproject.org/files/ENCFF848EGA/@@download/ENCFF848EGA.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF034IPI bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF721WZY 13451268 ENCODE Processing Pipeline 5ee4e32e6f3d2f8b204dc1ae1ff3edf3 https://www.encodeproject.org/files/ENCFF034IPI/@@download/ENCFF034IPI.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF600QVD bed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF140YDA, ENCFF700BWV, ENCFF721WZY 135841 ENCODE Processing Pipeline 596ec4ba387fcc19d849fec109208b15 https://www.encodeproject.org/files/ENCFF600QVD/@@download/ENCFF600QVD.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF959MYV bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF600QVD 319720 ENCODE Processing Pipeline 73a9ac1ee3ae4fd7199b345989e9f32b https://www.encodeproject.org/files/ENCFF959MYV/@@download/ENCFF959MYV.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF461HUA bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF468ZDX, ENCFF482NNF 271413332 ENCODE Processing Pipeline dfe6b065a554d58ad973c53354d58ee5 https://www.encodeproject.org/files/ENCFF461HUA/@@download/ENCFF461HUA.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF597BEZ bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF275STF, ENCFF522HDC 606123769 ENCODE Processing Pipeline 497f34f45682e81b239bc2de517413ab https://www.encodeproject.org/files/ENCFF597BEZ/@@download/ENCFF597BEZ.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF679RWO bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF275STF, ENCFF468ZDX, ENCFF482NNF, ENCFF522HDC 1059502875 ENCODE Processing Pipeline 84786e12dea8c6ea359f734f914bc9a3 https://www.encodeproject.org/files/ENCFF679RWO/@@download/ENCFF679RWO.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF700BWV bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF468ZDX, ENCFF482NNF 3992676 ENCODE Processing Pipeline 9d32157d894fd70a374755130566ef07 https://www.encodeproject.org/files/ENCFF700BWV/@@download/ENCFF700BWV.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF091OTC bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF140YDA 13294518 ENCODE Processing Pipeline efe716b018c7be0427988528dc75f433 https://www.encodeproject.org/files/ENCFF091OTC/@@download/ENCFF091OTC.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF938ETZ bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF700BWV 8957433 ENCODE Processing Pipeline 6a2ff89a9067c3aee890fce57e8c4949 https://www.encodeproject.org/files/ENCFF938ETZ/@@download/ENCFF938ETZ.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF858QMI bed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF140YDA, ENCFF700BWV, ENCFF721WZY 243606 ENCODE Processing Pipeline d4d2b801157ddbdfb7166fcf31bbfb22 https://www.encodeproject.org/files/ENCFF858QMI/@@download/ENCFF858QMI.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF904CPI bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF643CGH 395471962 ENCODE Processing Pipeline 12382461a588965b5a5e4ade25dc4f13 https://www.encodeproject.org/files/ENCFF904CPI/@@download/ENCFF904CPI.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF648HIU bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF643CGH 588138482 ENCODE Processing Pipeline 4b5e07434e7abd792781f3e3a1549860 https://www.encodeproject.org/files/ENCFF648HIU/@@download/ENCFF648HIU.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF555KVE bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF643CGH 1807291659 ENCODE Processing Pipeline d29d127bba63d7baa3e3b285bc9ebac4 https://www.encodeproject.org/files/ENCFF555KVE/@@download/ENCFF555KVE.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF397ZVS bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF643CGH 1142970133 ENCODE Processing Pipeline 01b13d86d1af15d2174a91611388f0e5 https://www.encodeproject.org/files/ENCFF397ZVS/@@download/ENCFF397ZVS.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF261BMQ fastq reads ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 36 single-ended 1068924080 Richard Myers, HAIB 62b84201e70f3e0daf42e1ca37052ae7 https://www.encodeproject.org/files/ENCFF261BMQ/@@download/ENCFF261BMQ.fastq.gz HiSeq 2000 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths missing controlled_by, insufficient read depth ENCFF776LSV bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF397ZVS, ENCFF836OEO 631562337 ENCODE Processing Pipeline 74523a8f711513fcc79f0ef4de65eff5 https://www.encodeproject.org/files/ENCFF776LSV/@@download/ENCFF776LSV.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF814OOG bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF204GLJ, ENCFF904CPI 494990899 ENCODE Processing Pipeline b746dd97e7d9e0b27c66fef5632b1f1a https://www.encodeproject.org/files/ENCFF814OOG/@@download/ENCFF814OOG.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF795LAL bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF204GLJ, ENCFF397ZVS, ENCFF836OEO, ENCFF904CPI 1016937018 ENCODE Processing Pipeline 9eb518f115cae4be345080927aafcb6e https://www.encodeproject.org/files/ENCFF795LAL/@@download/ENCFF795LAL.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF726ONU bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF397ZVS, ENCFF836OEO 630788200 ENCODE Processing Pipeline d1220007ff87f9fb50b950c32b2fcd8c https://www.encodeproject.org/files/ENCFF726ONU/@@download/ENCFF726ONU.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF545YAP bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF204GLJ, ENCFF904CPI 280246823 ENCODE Processing Pipeline 483b1b70b8275a4460c65650dd96a60c https://www.encodeproject.org/files/ENCFF545YAP/@@download/ENCFF545YAP.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF168SJR bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF204GLJ, ENCFF904CPI 3902770 ENCODE Processing Pipeline 3b4795c308d9de113ba1b9b69af16b65 https://www.encodeproject.org/files/ENCFF168SJR/@@download/ENCFF168SJR.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF845IXT bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF397ZVS, ENCFF836OEO 6215754 ENCODE Processing Pipeline 3480c7f0cc1a561f4a9a8dcd0483d627 https://www.encodeproject.org/files/ENCFF845IXT/@@download/ENCFF845IXT.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF651CUK bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF204GLJ, ENCFF397ZVS, ENCFF836OEO, ENCFF904CPI 1022478338 ENCODE Processing Pipeline 94f8d9a79d14f474f900a37c25b3a235 https://www.encodeproject.org/files/ENCFF651CUK/@@download/ENCFF651CUK.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF542DYA bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF565FCD 13456246 ENCODE Processing Pipeline b9a69f3186cf77a4974ecaff051ec4d4 https://www.encodeproject.org/files/ENCFF542DYA/@@download/ENCFF542DYA.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF565FCD bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF204GLJ, ENCFF397ZVS, ENCFF836OEO, ENCFF904CPI 6718047 ENCODE Processing Pipeline 5f5e6b6f11ecd17173fef24c2bb08cfe https://www.encodeproject.org/files/ENCFF565FCD/@@download/ENCFF565FCD.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF888CBW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF996AMX 476524 ENCODE Processing Pipeline 90bd3a5d4757112b311ccc296f1b7c7d https://www.encodeproject.org/files/ENCFF888CBW/@@download/ENCFF888CBW.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF592VHW bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF168SJR 8863372 ENCODE Processing Pipeline 8fb68e43ad0cb4186674c4a2542fa53a https://www.encodeproject.org/files/ENCFF592VHW/@@download/ENCFF592VHW.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF399ERD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF528EDV 317895 ENCODE Processing Pipeline 34d165faa2f2d916b552b58ae654ced2 https://www.encodeproject.org/files/ENCFF399ERD/@@download/ENCFF399ERD.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF060UUD bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF643CGH 1807291664 ENCODE Processing Pipeline 67d0516d5ba6eb718e238da6964a1a79 https://www.encodeproject.org/files/ENCFF060UUD/@@download/ENCFF060UUD.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF592IZF bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF845IXT 13329880 ENCODE Processing Pipeline 24c25e4f016d7f2d43bdf71b6550da7f https://www.encodeproject.org/files/ENCFF592IZF/@@download/ENCFF592IZF.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF528EDV bed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF168SJR, ENCFF419RSJ, ENCFF565FCD, ENCFF845IXT 134702 ENCODE Processing Pipeline e6cf147e42dd3a8517369d47aae30b05 https://www.encodeproject.org/files/ENCFF528EDV/@@download/ENCFF528EDV.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF996AMX bed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF168SJR, ENCFF419RSJ, ENCFF565FCD, ENCFF845IXT 246030 ENCODE Processing Pipeline 360d0e8096959f20f6c52a978ed25c87 https://www.encodeproject.org/files/ENCFF996AMX/@@download/ENCFF996AMX.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF147MVP bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF261BMQ, ENCFF643CGH 1362097283 ENCODE Processing Pipeline 57f6911f9f6857f62f9f8e69b1861ea1 https://www.encodeproject.org/files/ENCFF147MVP/@@download/ENCFF147MVP.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF206YYH bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF261BMQ, ENCFF643CGH 789991107 ENCODE Processing Pipeline 1a3c8ed2582f34e8cc3ee156cdb5d5e3 https://www.encodeproject.org/files/ENCFF206YYH/@@download/ENCFF206YYH.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF793KZB bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF643CGH 1142970137 ENCODE Processing Pipeline 87e80543df35e3da7289fe2be473c8f7 https://www.encodeproject.org/files/ENCFF793KZB/@@download/ENCFF793KZB.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent platforms, moderate library complexity, low read length, mild to moderate bottlenecking missing unfiltered alignments, out of date analysis, biological replicates with identical biosample, inconsistent mapped reads lengths insufficient read depth ENCFF278AAS fastq reads ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 1 ENCFF662XQN 2630761838 Richard Myers, HAIB 9b4d6bd9c65e51f4479f3ef5a698d2a8 https://www.encodeproject.org/files/ENCFF278AAS/@@download/ENCFF278AAS.fastq.gz HiSeq 2000 /files/ENCFF267WYT/ released antibody characterized with exemption experiment not submitted to GEO ENCFF662XQN fastq reads ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 1 76 paired-ended 2 ENCFF278AAS 2746850468 Richard Myers, HAIB 4f61de4dd4fa7bea0b7499e745c78f7e https://www.encodeproject.org/files/ENCFF662XQN/@@download/ENCFF662XQN.fastq.gz HiSeq 2000 /files/ENCFF953BWE/ released antibody characterized with exemption experiment not submitted to GEO ENCFF882XMI bam alignments ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF278AAS, ENCFF662XQN, ENCFF807MUK 4322413820 ENCODE Processing Pipeline 7818b39ae0b59bb3390ddeb6c28c4d52 https://www.encodeproject.org/files/ENCFF882XMI/@@download/ENCFF882XMI.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF032MAC bam unfiltered alignments ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF278AAS, ENCFF643CGH, ENCFF662XQN 5801658803 ENCODE Processing Pipeline d1856d8ceddecefaebb454c2f2116c89 https://www.encodeproject.org/files/ENCFF032MAC/@@download/ENCFF032MAC.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF023BZT bam unfiltered alignments ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF278AAS, ENCFF662XQN, ENCFF807MUK 5797408729 ENCODE Processing Pipeline 714586466e0615609ddc9c9d72e0333e https://www.encodeproject.org/files/ENCFF023BZT/@@download/ENCFF023BZT.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF723HAH bam alignments ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 76 ENCFF278AAS, ENCFF643CGH, ENCFF662XQN 4323740572 ENCODE Processing Pipeline 9a3e1895e4c4326b724804d0847bd2be https://www.encodeproject.org/files/ENCFF723HAH/@@download/ENCFF723HAH.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF194RUS bigWig signal p-value ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF481ALK, ENCFF723HAH 881508397 ENCODE Processing Pipeline b05582c29306b70af2ab4aaace36910e https://www.encodeproject.org/files/ENCFF194RUS/@@download/ENCFF194RUS.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF487HMW bigBed narrowPeak peaks ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF937JXF 12383276 ENCODE Processing Pipeline 3700d708a2619e1a7e64e09e29b99436 https://www.encodeproject.org/files/ENCFF487HMW/@@download/ENCFF487HMW.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF748RWG bigWig fold change over control ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF481ALK, ENCFF723HAH 844428202 ENCODE Processing Pipeline e993d77a6220530894d01e6f8fde91ea https://www.encodeproject.org/files/ENCFF748RWG/@@download/ENCFF748RWG.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF937JXF bed narrowPeak peaks ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF481ALK, ENCFF723HAH 6781296 ENCODE Processing Pipeline fbe397a7a139cea49c0a5ee4c831e237 https://www.encodeproject.org/files/ENCFF937JXF/@@download/ENCFF937JXF.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF185NAU bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF419RSJ, ENCFF937JXF 1226501 ENCODE Processing Pipeline 8339e26b1f563980e521b09e7a0ab3aa https://www.encodeproject.org/files/ENCFF185NAU/@@download/ENCFF185NAU.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF255KKM bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF185NAU 2030829 ENCODE Processing Pipeline fb24094c0c023d16414f552ac2d8816f https://www.encodeproject.org/files/ENCFF255KKM/@@download/ENCFF255KKM.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF416BZK bigWig signal p-value ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF807EBL, ENCFF882XMI 875467208 ENCODE Processing Pipeline 596e5c02d06ca3d2a06d8debdbbeb27f https://www.encodeproject.org/files/ENCFF416BZK/@@download/ENCFF416BZK.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF563XUY bigWig fold change over control ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF807EBL, ENCFF882XMI 844188903 ENCODE Processing Pipeline 1d92c36f60a46ab750f3dfb7e7298c74 https://www.encodeproject.org/files/ENCFF563XUY/@@download/ENCFF563XUY.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF076OEB bed narrowPeak peaks ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF807EBL, ENCFF882XMI 7103377 ENCODE Processing Pipeline f3c6bfeb93ee4f0d076ce1d1802a13c5 https://www.encodeproject.org/files/ENCFF076OEB/@@download/ENCFF076OEB.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF431QZC bigBed narrowPeak peaks ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF076OEB 12787686 ENCODE Processing Pipeline 031d13d9ce0cf0e0a43f7f47581eba3c https://www.encodeproject.org/files/ENCFF431QZC/@@download/ENCFF431QZC.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF453UXT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF845DVI 2695468 ENCODE Processing Pipeline 54429bc95f95a10addbe6ad329906c94 https://www.encodeproject.org/files/ENCFF453UXT/@@download/ENCFF453UXT.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF845DVI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR959UQA ChIP-seq UBERON:0002106 spleen tissue adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document formaldehyde False 2017-10-31 ENCODE 1 ENCFF001TDO, ENCFF076OEB 1274074 ENCODE Processing Pipeline 0fe2b9afe5a520d240d79944b9173975 https://www.encodeproject.org/files/ENCFF845DVI/@@download/ENCFF845DVI.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF000OTK bam alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OTS 714087449 Richard Myers, HAIB 0cd5832143e8b88d62c4957056a4aa25 https://www.encodeproject.org/files/ENCFF000OTK/@@download/ENCFF000OTK.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OTL bigBed broadPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCK 516163 Richard Myers, HAIB b17e0946b6831444d7d33503d769f156 https://www.encodeproject.org/files/ENCFF000OTL/@@download/ENCFF000OTL.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OTM bigBed broadPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCL 507179 Richard Myers, HAIB fc4caad73f31a76d13331e64c246c166 https://www.encodeproject.org/files/ENCFF000OTM/@@download/ENCFF000OTM.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OTN bam alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OTW 751687723 Richard Myers, HAIB 4e9bc41baa164d5ecb156c801f21ad6d https://www.encodeproject.org/files/ENCFF000OTN/@@download/ENCFF000OTN.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000OTP bigWig raw signal ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 10810512 Richard Myers, HAIB 17b4c7af467dea946b3dd276995e8aa8 https://www.encodeproject.org/files/ENCFF000OTP/@@download/ENCFF000OTP.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OTQ bigWig raw signal ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 11024841 Richard Myers, HAIB 459a6c9c3395ff43a1e23a6130d967e4 https://www.encodeproject.org/files/ENCFF000OTQ/@@download/ENCFF000OTQ.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OTS fastq reads ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 695506308 Richard Myers, HAIB bdb0e3d8d247b0403ea2ec6af3654588 https://www.encodeproject.org/files/ENCFF000OTS/@@download/ENCFF000OTS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth biological replicates with identical biosample ENCFF000OTW fastq reads ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 798961890 Richard Myers, HAIB 563c5a3e59c4f17ce5022a96f44b81fd https://www.encodeproject.org/files/ENCFF000OTW/@@download/ENCFF000OTW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth biological replicates with identical biosample ENCFF001UCK bed broadPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 286693 Richard Myers, HAIB b69b0a6c10eb5b72d440578292de9923 https://www.encodeproject.org/files/ENCFF001UCK/@@download/ENCFF001UCK.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UCL bed broadPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 263042 Richard Myers, HAIB 46fedd7ca703a31f50b7412166da7940 https://www.encodeproject.org/files/ENCFF001UCL/@@download/ENCFF001UCL.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CJK bed narrowPeak optimal idr thresholded peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 294919 ENCODE Consortium Analysis Working Group aab140e1c863b7cec5f3f96c7cb939e2 https://www.encodeproject.org/files/ENCFF002CJK/@@download/ENCFF002CJK.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF047OMP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE ENCFF002CJK 588335 ENCODE Consortium b80dda0bf5e2d646fa934258c317c059 https://www.encodeproject.org/files/ENCFF047OMP/@@download/ENCFF047OMP.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF477CHR bam unfiltered alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTW, ENCFF643CGH 1039458544 ENCODE Processing Pipeline 784756dcd0bc162ccb58095a18955405 https://www.encodeproject.org/files/ENCFF477CHR/@@download/ENCFF477CHR.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF346XVM bam alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTW, ENCFF643CGH 630793208 ENCODE Processing Pipeline 841d80ec0aed77f6bd9a3cefbea0b40f https://www.encodeproject.org/files/ENCFF346XVM/@@download/ENCFF346XVM.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF949TUZ bam alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTS, ENCFF643CGH 602846656 ENCODE Processing Pipeline 764816c8e7cbbe195f857117bb480d97 https://www.encodeproject.org/files/ENCFF949TUZ/@@download/ENCFF949TUZ.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF979RJF bam unfiltered alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTS, ENCFF643CGH 921081888 ENCODE Processing Pipeline f832fef87a921fab2405e420215db9c1 https://www.encodeproject.org/files/ENCFF979RJF/@@download/ENCFF979RJF.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF271AEZ bam alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTS, ENCFF807MUK 603170242 ENCODE Processing Pipeline 56e941c40e60faefb4e3164e88a2bcc1 https://www.encodeproject.org/files/ENCFF271AEZ/@@download/ENCFF271AEZ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF028EPQ bam unfiltered alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OTS, ENCFF807MUK 918303029 ENCODE Processing Pipeline 92fdbc4200bb185fbe3e04884d39e923 https://www.encodeproject.org/files/ENCFF028EPQ/@@download/ENCFF028EPQ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF668ZBZ bam alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTW, ENCFF807MUK 631163376 ENCODE Processing Pipeline 0430634ff39d897af72cf845b3c04ce8 https://www.encodeproject.org/files/ENCFF668ZBZ/@@download/ENCFF668ZBZ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF295GDG bam unfiltered alignments ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OTW, ENCFF807MUK 1036196972 ENCODE Processing Pipeline fbf3a9c34be988f9e4643bbe2871a78a https://www.encodeproject.org/files/ENCFF295GDG/@@download/ENCFF295GDG.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF571TTQ bigWig signal p-value ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346XVM, ENCFF948LKH 387896097 ENCODE Processing Pipeline 95aece34db238cb51c53a61e24587b87 https://www.encodeproject.org/files/ENCFF571TTQ/@@download/ENCFF571TTQ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF804VZR bigWig signal p-value ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF949TUZ 368165050 ENCODE Processing Pipeline 60b53d516da563272998bfd3c63e6709 https://www.encodeproject.org/files/ENCFF804VZR/@@download/ENCFF804VZR.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF286DIH bigWig fold change over control ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346XVM, ENCFF948LKH 302587318 ENCODE Processing Pipeline bb145ef4d0288bc064872ed00c3f6fa5 https://www.encodeproject.org/files/ENCFF286DIH/@@download/ENCFF286DIH.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF703VUT bigWig signal p-value ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF346XVM, ENCFF948LKH, ENCFF949TUZ 529159465 ENCODE Processing Pipeline a1f49c53740723d84a6b6ad71e07dd06 https://www.encodeproject.org/files/ENCFF703VUT/@@download/ENCFF703VUT.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF861UXW bigWig fold change over control ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF949TUZ 316085380 ENCODE Processing Pipeline 8e04efc12ff6473e8980189d67ea12bc https://www.encodeproject.org/files/ENCFF861UXW/@@download/ENCFF861UXW.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF256MVQ bigWig fold change over control ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF346XVM, ENCFF948LKH, ENCFF949TUZ 527411072 ENCODE Processing Pipeline c00f4bbc95a4da19173843eabeeef31e https://www.encodeproject.org/files/ENCFF256MVQ/@@download/ENCFF256MVQ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF804LRQ bed narrowPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948LKH, ENCFF949TUZ 4780365 ENCODE Processing Pipeline 5cdf6cb0a45fdebb2f4e734ca523aa0e https://www.encodeproject.org/files/ENCFF804LRQ/@@download/ENCFF804LRQ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF695XRW bed narrowPeak conservative idr thresholded peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF539PMO, ENCFF692RHW, ENCFF804LRQ 334552 ENCODE Processing Pipeline 24b875c51468120d5d7fe7211ef0aa4c https://www.encodeproject.org/files/ENCFF695XRW/@@download/ENCFF695XRW.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF539PMO bed narrowPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF346XVM, ENCFF948LKH 4610991 ENCODE Processing Pipeline 1b475f8d5c4981c3bf9c17e004ee8bce https://www.encodeproject.org/files/ENCFF539PMO/@@download/ENCFF539PMO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF891KNU bigBed narrowPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF804LRQ 10748885 ENCODE Processing Pipeline 7fe5440334893adc05170693aca67793 https://www.encodeproject.org/files/ENCFF891KNU/@@download/ENCFF891KNU.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF133LKP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF500JFI 672902 ENCODE Processing Pipeline 8a38401cc312b1715431bc575d0fd858 https://www.encodeproject.org/files/ENCFF133LKP/@@download/ENCFF133LKP.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF659VMZ bigBed narrowPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF692RHW 13533777 ENCODE Processing Pipeline 1c38bf8b0f596cf54b000753b111339d https://www.encodeproject.org/files/ENCFF659VMZ/@@download/ENCFF659VMZ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF366UVW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF695XRW 630832 ENCODE Processing Pipeline d398b7eb0b623603649a52f2fe9b77fd https://www.encodeproject.org/files/ENCFF366UVW/@@download/ENCFF366UVW.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF692RHW bed narrowPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF346XVM, ENCFF948LKH, ENCFF949TUZ 5636270 ENCODE Processing Pipeline a49651c20459382b05c26deb22cc7aaf https://www.encodeproject.org/files/ENCFF692RHW/@@download/ENCFF692RHW.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF450TPR bigBed narrowPeak peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF539PMO 10561009 ENCODE Processing Pipeline c02941366a31b8a60840579d402a007a https://www.encodeproject.org/files/ENCFF450TPR/@@download/ENCFF450TPR.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF500JFI bed narrowPeak optimal idr thresholded peaks ENCSR000BIR ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF539PMO, ENCFF692RHW, ENCFF804LRQ 364303 ENCODE Processing Pipeline 90cc3b9e4c87a99cafe7098f1a5b1843 https://www.encodeproject.org/files/ENCFF500JFI/@@download/ENCFF500JFI.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF000PRV bam alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PSD 755619753 Richard Myers, HAIB 844702288afe2c5185e7c61c06f1d0a2 https://www.encodeproject.org/files/ENCFF000PRV/@@download/ENCFF000PRV.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PRW bam alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PSE 931709662 Richard Myers, HAIB eee78dc4cbfb70251025907c6ce96497 https://www.encodeproject.org/files/ENCFF000PRW/@@download/ENCFF000PRW.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PRX bigBed broadPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UIA 568605 Richard Myers, HAIB cfea502539895fdd1ae5753a03b8031b https://www.encodeproject.org/files/ENCFF000PRX/@@download/ENCFF000PRX.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PRY bigBed broadPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UIB 254001 Richard Myers, HAIB 6457c8cefe501b44ef1dcbf826701385 https://www.encodeproject.org/files/ENCFF000PRY/@@download/ENCFF000PRY.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PRZ bigWig raw signal ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 31209515 Richard Myers, HAIB 8f5546e8ca66d828b7f17125852966e7 https://www.encodeproject.org/files/ENCFF000PRZ/@@download/ENCFF000PRZ.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PSB bigWig raw signal ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 10371116 Richard Myers, HAIB 1fe6b839a087c469724ee8ac0f7f0dcd https://www.encodeproject.org/files/ENCFF000PSB/@@download/ENCFF000PSB.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PSD fastq reads ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 727013386 Richard Myers, HAIB 58560b4e522abd59614dec8eab397d74 https://www.encodeproject.org/files/ENCFF000PSD/@@download/ENCFF000PSD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PSE fastq reads ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 995663932 Richard Myers, HAIB 3d8732d4407c2f6f2bb2c15991c48aa5 https://www.encodeproject.org/files/ENCFF000PSE/@@download/ENCFF000PSE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UIA bed broadPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 367239 Richard Myers, HAIB e2c57f2448d3ac6c75d574f1f24813d3 https://www.encodeproject.org/files/ENCFF001UIA/@@download/ENCFF001UIA.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UIB bed broadPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 143783 Richard Myers, HAIB b91d33a13424ae87a79faa512c01f58c https://www.encodeproject.org/files/ENCFF001UIB/@@download/ENCFF001UIB.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF002CLI bed narrowPeak optimal idr thresholded peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 380028 ENCODE Consortium Analysis Working Group 15a512ff508f74ddd63211bb308b1fe5 https://www.encodeproject.org/files/ENCFF002CLI/@@download/ENCFF002CLI.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF910CML bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE ENCFF002CLI 826778 ENCODE Consortium d31ec90bc6236f48d94c81742376748f https://www.encodeproject.org/files/ENCFF910CML/@@download/ENCFF910CML.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF421OBJ bam unfiltered alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSD, ENCFF643CGH 901756564 ENCODE Processing Pipeline 558efd5054354d28269b9e97fc118a32 https://www.encodeproject.org/files/ENCFF421OBJ/@@download/ENCFF421OBJ.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF499BAH bam alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSD, ENCFF643CGH 551430997 ENCODE Processing Pipeline a56bcb060382acf7e0bac1c03ecb637d https://www.encodeproject.org/files/ENCFF499BAH/@@download/ENCFF499BAH.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF056BXB bam alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PSE, ENCFF643CGH 338465756 ENCODE Processing Pipeline cef3bbe7226380fd7ee027db02fba1c4 https://www.encodeproject.org/files/ENCFF056BXB/@@download/ENCFF056BXB.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF748ERK bam unfiltered alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PSE, ENCFF643CGH 1149366982 ENCODE Processing Pipeline 45a5b21f7fd63264b7bc89ca644c02f1 https://www.encodeproject.org/files/ENCFF748ERK/@@download/ENCFF748ERK.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF299WPU bam alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSD, ENCFF807MUK 551729673 ENCODE Processing Pipeline 2a645522ba6a6e680d718de35321d5d9 https://www.encodeproject.org/files/ENCFF299WPU/@@download/ENCFF299WPU.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF925FRM bam alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PSE, ENCFF807MUK 338725466 ENCODE Processing Pipeline 48a9fc8af9e42397be729ff011e40ed9 https://www.encodeproject.org/files/ENCFF925FRM/@@download/ENCFF925FRM.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF258DFO bam unfiltered alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSD, ENCFF807MUK 899511757 ENCODE Processing Pipeline 3e3a4b4f9a12c9a315259dd48ae6bc7a https://www.encodeproject.org/files/ENCFF258DFO/@@download/ENCFF258DFO.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF958DMR bam unfiltered alignments ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PSE, ENCFF807MUK 1147573829 ENCODE Processing Pipeline f0554fefc5ceec4a04c8e51a277b36b3 https://www.encodeproject.org/files/ENCFF958DMR/@@download/ENCFF958DMR.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF086XMQ bigWig signal p-value ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF499BAH 407536104 ENCODE Processing Pipeline b76792064108270a41a62714c5a792ce https://www.encodeproject.org/files/ENCFF086XMQ/@@download/ENCFF086XMQ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF748RLY bigWig signal p-value ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF056BXB, ENCFF285LVE 355118301 ENCODE Processing Pipeline 5aeac1c381fed7b5647275cdc1f3337f https://www.encodeproject.org/files/ENCFF748RLY/@@download/ENCFF748RLY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF775SBU bigWig signal p-value ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF056BXB, ENCFF285LVE, ENCFF499BAH 587969770 ENCODE Processing Pipeline 7d73314d72259783488ee54d57d9a87e https://www.encodeproject.org/files/ENCFF775SBU/@@download/ENCFF775SBU.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF173FYP bigWig fold change over control ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF499BAH 313402361 ENCODE Processing Pipeline 1f7c297de5f7344af58c42f0fb6200f8 https://www.encodeproject.org/files/ENCFF173FYP/@@download/ENCFF173FYP.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF872FSE bigWig fold change over control ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF056BXB, ENCFF285LVE 199721438 ENCODE Processing Pipeline 90c05442242e5d00a65cea8405c42ca6 https://www.encodeproject.org/files/ENCFF872FSE/@@download/ENCFF872FSE.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF954VXQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF042DUJ 377740 ENCODE Processing Pipeline 16e06fc8eb8a8b538ff69eaf0ce2e3a2 https://www.encodeproject.org/files/ENCFF954VXQ/@@download/ENCFF954VXQ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF947EVC bed narrowPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF056BXB, ENCFF285LVE 4856937 ENCODE Processing Pipeline 312e72fc35ddcca7942ea92a644f3ce6 https://www.encodeproject.org/files/ENCFF947EVC/@@download/ENCFF947EVC.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF955YEZ bed narrowPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF499BAH 4836034 ENCODE Processing Pipeline f86bb1b3df9b644e5d560070c760ca2e https://www.encodeproject.org/files/ENCFF955YEZ/@@download/ENCFF955YEZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF276RSI bed narrowPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF056BXB, ENCFF285LVE, ENCFF499BAH 5650380 ENCODE Processing Pipeline 6d7e9fa192c0898180e66279914948f9 https://www.encodeproject.org/files/ENCFF276RSI/@@download/ENCFF276RSI.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF176UBJ bigBed narrowPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF276RSI 13215613 ENCODE Processing Pipeline 0a580258ad15e7852d02bd8867f2cf02 https://www.encodeproject.org/files/ENCFF176UBJ/@@download/ENCFF176UBJ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF677ERZ bigWig fold change over control ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF056BXB, ENCFF285LVE, ENCFF499BAH 458016132 ENCODE Processing Pipeline b7d1126f10dd39d8c56ebb24cba28cb9 https://www.encodeproject.org/files/ENCFF677ERZ/@@download/ENCFF677ERZ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF340JMW bigBed narrowPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF947EVC 12088267 ENCODE Processing Pipeline 70c39e876d234abfd6a14fc711d165fe https://www.encodeproject.org/files/ENCFF340JMW/@@download/ENCFF340JMW.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF270TZK bigBed narrowPeak peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF955YEZ 10803200 ENCODE Processing Pipeline 56a45df05896fa5a7af222ecce3c6730 https://www.encodeproject.org/files/ENCFF270TZK/@@download/ENCFF270TZK.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF520IPU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF177YDT 843040 ENCODE Processing Pipeline 6e07ce7da2168c46c2c6199199266066 https://www.encodeproject.org/files/ENCFF520IPU/@@download/ENCFF520IPU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF042DUJ bed narrowPeak conservative idr thresholded peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF276RSI, ENCFF419RSJ, ENCFF947EVC, ENCFF955YEZ 169180 ENCODE Processing Pipeline e27d3e59130cced68f3a24907ce637b4 https://www.encodeproject.org/files/ENCFF042DUJ/@@download/ENCFF042DUJ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF177YDT bed narrowPeak optimal idr thresholded peaks ENCSR000BNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF276RSI, ENCFF419RSJ, ENCFF947EVC, ENCFF955YEZ 392410 ENCODE Processing Pipeline 2358169f2f8e6e7fb8d206a097f66e89 https://www.encodeproject.org/files/ENCFF177YDT/@@download/ENCFF177YDT.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NLP bam alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NMB 555474459 Richard Myers, HAIB fe08e84d7f283b79a18c749ac31a4fe7 https://www.encodeproject.org/files/ENCFF000NLP/@@download/ENCFF000NLP.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLQ bigBed broadPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TUR 381577 Richard Myers, HAIB 292be96bf4e4cce944f9c8262a3f4485 https://www.encodeproject.org/files/ENCFF000NLQ/@@download/ENCFF000NLQ.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLR bigBed broadPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TUS 331274 Richard Myers, HAIB bffde865038e789c60cf8a53abbc4ac4 https://www.encodeproject.org/files/ENCFF000NLR/@@download/ENCFF000NLR.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLS bam alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NMD 453476813 Richard Myers, HAIB 7d6df8fdb102d1862b018623b3ce477d https://www.encodeproject.org/files/ENCFF000NLS/@@download/ENCFF000NLS.bam hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NLV bigWig raw signal ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 11369553 Richard Myers, HAIB ba9217032ed84146770f0e5adf8effe4 https://www.encodeproject.org/files/ENCFF000NLV/@@download/ENCFF000NLV.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NLW bigWig raw signal ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 9037808 Richard Myers, HAIB e779f4e8cee946bcb313be8dbccdb9e4 https://www.encodeproject.org/files/ENCFF000NLW/@@download/ENCFF000NLW.bigWig hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NMB fastq reads ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 640852140 Richard Myers, HAIB 6e7571a8d36c1617ed48ff822fa502a0 https://www.encodeproject.org/files/ENCFF000NMB/@@download/ENCFF000NMB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NLT/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NMD fastq reads ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 653381387 Richard Myers, HAIB 9e4eebce2b5e29b7837efec608c191f2 https://www.encodeproject.org/files/ENCFF000NMD/@@download/ENCFF000NMD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NLU/ released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF001TUR bed broadPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 192081 Richard Myers, HAIB 10b2a80dfeef6ea31f305356182a93aa https://www.encodeproject.org/files/ENCFF001TUR/@@download/ENCFF001TUR.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TUS bed broadPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 158357 Richard Myers, HAIB 6dbd5be7610da73b65355b7eba2cf41b https://www.encodeproject.org/files/ENCFF001TUS/@@download/ENCFF001TUS.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CGJ bed narrowPeak optimal idr thresholded peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 392007 ENCODE Consortium Analysis Working Group 9e0bebb6315e2ad5a66bd06d78e7107e https://www.encodeproject.org/files/ENCFF002CGJ/@@download/ENCFF002CGJ.bed.gz hg19 archived low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF490IAP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE ENCFF002CGJ 923948 ENCODE Consortium 4212acfb8363743e250620985b3a198b https://www.encodeproject.org/files/ENCFF490IAP/@@download/ENCFF490IAP.bigBed hg19 archived low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF309VOE bam unfiltered alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NMD, ENCFF643CGH 827694547 ENCODE Processing Pipeline 37daa858310b27c3be190acbb81fdd1e https://www.encodeproject.org/files/ENCFF309VOE/@@download/ENCFF309VOE.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF811NLF bam alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NMD, ENCFF643CGH 438721804 ENCODE Processing Pipeline 8b85b306c5dcc86fc314b32f4158664d https://www.encodeproject.org/files/ENCFF811NLF/@@download/ENCFF811NLF.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF912ZVI bam unfiltered alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NMB, ENCFF643CGH 832419703 ENCODE Processing Pipeline 986f400102eb0137e64542f7e0c80ee0 https://www.encodeproject.org/files/ENCFF912ZVI/@@download/ENCFF912ZVI.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF880RHB bam alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NMB, ENCFF643CGH 517056020 ENCODE Processing Pipeline 4d6c6574cf2405e5cb010e6ebc0ae066 https://www.encodeproject.org/files/ENCFF880RHB/@@download/ENCFF880RHB.bam GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF491YFV bam unfiltered alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NMB, ENCFF807MUK 829970116 ENCODE Processing Pipeline cd44746d5c2fdcabaf7e8ba00dbd8eec https://www.encodeproject.org/files/ENCFF491YFV/@@download/ENCFF491YFV.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF312WJL bam alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NMB, ENCFF807MUK 517323305 ENCODE Processing Pipeline 694a08dc1f1c04c8049da9310190f32d https://www.encodeproject.org/files/ENCFF312WJL/@@download/ENCFF312WJL.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF069FGI bam unfiltered alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NMD, ENCFF807MUK 825012978 ENCODE Processing Pipeline c41d6343e135c6c90c12cf6b60587e82 https://www.encodeproject.org/files/ENCFF069FGI/@@download/ENCFF069FGI.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF122FZS bam alignments ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NMD, ENCFF807MUK 438928413 ENCODE Processing Pipeline 9443439be86652e09a02e310144e2364 https://www.encodeproject.org/files/ENCFF122FZS/@@download/ENCFF122FZS.bam hg19 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF678SNE bigWig signal p-value ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF703HXP, ENCFF811NLF, ENCFF820TDD 343182969 ENCODE Processing Pipeline bcc138ac8fe836a19d1ed4c98d4a4b7b https://www.encodeproject.org/files/ENCFF678SNE/@@download/ENCFF678SNE.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF793LJB bigWig signal p-value ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF703HXP, ENCFF820TDD, ENCFF880RHB 334049965 ENCODE Processing Pipeline 804cd6c3f651b8994fe6e1228ec1bbb5 https://www.encodeproject.org/files/ENCFF793LJB/@@download/ENCFF793LJB.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF471SOX bigWig fold change over control ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF703HXP, ENCFF820TDD, ENCFF880RHB 233892990 ENCODE Processing Pipeline 094050f0d80fe14629f9a468a4dfb0f8 https://www.encodeproject.org/files/ENCFF471SOX/@@download/ENCFF471SOX.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF897AAX bigWig signal p-value ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF703HXP, ENCFF811NLF, ENCFF820TDD, ENCFF880RHB 449007988 ENCODE Processing Pipeline 56c2863b5532773d74ba16b1a5c4bd49 https://www.encodeproject.org/files/ENCFF897AAX/@@download/ENCFF897AAX.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF169OSJ bigWig fold change over control ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF703HXP, ENCFF811NLF, ENCFF820TDD, ENCFF880RHB 417474448 ENCODE Processing Pipeline da7bc20d386cb6b2bb86e845894bde99 https://www.encodeproject.org/files/ENCFF169OSJ/@@download/ENCFF169OSJ.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF293UAL bigWig fold change over control ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF703HXP, ENCFF811NLF, ENCFF820TDD 240739362 ENCODE Processing Pipeline dddf2e032b51818f9e80bf7fcfe31b81 https://www.encodeproject.org/files/ENCFF293UAL/@@download/ENCFF293UAL.bigWig GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF545VMA bed narrowPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF703HXP, ENCFF820TDD, ENCFF880RHB 4319874 ENCODE Processing Pipeline fd3417732aea53feff665135604ed69f https://www.encodeproject.org/files/ENCFF545VMA/@@download/ENCFF545VMA.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF539XCD bed narrowPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF703HXP, ENCFF811NLF, ENCFF820TDD 4174616 ENCODE Processing Pipeline 282add0cbdb093023d3a276773dfaeec https://www.encodeproject.org/files/ENCFF539XCD/@@download/ENCFF539XCD.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF780WTZ bed narrowPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF703HXP, ENCFF811NLF, ENCFF820TDD, ENCFF880RHB 4689137 ENCODE Processing Pipeline d7d05eca6822f667a64a0ed6eaeb81e5 https://www.encodeproject.org/files/ENCFF780WTZ/@@download/ENCFF780WTZ.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF562HSJ bigBed narrowPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF539XCD 10306058 ENCODE Processing Pipeline 26310ba5d5622018c0ec341bc4d3c40d https://www.encodeproject.org/files/ENCFF562HSJ/@@download/ENCFF562HSJ.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF346UMT bigBed narrowPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF545VMA 10414544 ENCODE Processing Pipeline d0257a3d309ba2e5796b45edbe6626fc https://www.encodeproject.org/files/ENCFF346UMT/@@download/ENCFF346UMT.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF935PCI bed narrowPeak conservative idr thresholded peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF539XCD, ENCFF545VMA, ENCFF780WTZ 291835 ENCODE Processing Pipeline 9374e0365d90b71c22056a59e9d62403 https://www.encodeproject.org/files/ENCFF935PCI/@@download/ENCFF935PCI.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF310AKD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF935PCI 555604 ENCODE Processing Pipeline 0780f8f20f41a60dbd8e48128649cbb2 https://www.encodeproject.org/files/ENCFF310AKD/@@download/ENCFF310AKD.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF351WHV bigBed narrowPeak peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF780WTZ 10955132 ENCODE Processing Pipeline c754207bcb1a34c3765fe180b8155a07 https://www.encodeproject.org/files/ENCFF351WHV/@@download/ENCFF351WHV.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF076OFH bed narrowPeak optimal idr thresholded peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF539XCD, ENCFF545VMA, ENCFF780WTZ 298512 ENCODE Processing Pipeline 8cf14f99bc3ac749f6b1035b2303bed7 https://www.encodeproject.org/files/ENCFF076OFH/@@download/ENCFF076OFH.bed.gz GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF984OPX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIY ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens estradiol ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF076OFH 565320 ENCODE Processing Pipeline 2dae0363fbd7583c8cda3e3c5de6c605 https://www.encodeproject.org/files/ENCFF984OPX/@@download/ENCFF984OPX.bigBed GRCh38 released low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000PEL bam alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PEV 1153196964 Richard Myers, HAIB 18df715245bd77416dad7a1ec8effbcd https://www.encodeproject.org/files/ENCFF000PEL/@@download/ENCFF000PEL.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PEN bigBed broadPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFA 1241832 Richard Myers, HAIB aedc7bb08bebb6bb96d19b5d613f4819 https://www.encodeproject.org/files/ENCFF000PEN/@@download/ENCFF000PEN.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PEO bigBed broadPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFB 1681855 Richard Myers, HAIB 8f7cd2eddfa8a64e5a70bbff4f7e4fc2 https://www.encodeproject.org/files/ENCFF000PEO/@@download/ENCFF000PEO.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PEP bam alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PFC 1284791515 Richard Myers, HAIB 67f7179bc6f4511a6c01572ff41e15b3 https://www.encodeproject.org/files/ENCFF000PEP/@@download/ENCFF000PEP.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PER bigWig raw signal ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 52537405 Richard Myers, HAIB e2967dcf8db0dede5df275d4b0a92180 https://www.encodeproject.org/files/ENCFF000PER/@@download/ENCFF000PER.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PES bigWig raw signal ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 89321027 Richard Myers, HAIB 74534d13460f06ba90d3a3459d3e8206 https://www.encodeproject.org/files/ENCFF000PES/@@download/ENCFF000PES.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PEV fastq reads ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1611652158 Richard Myers, HAIB 1a24ba704d4fc91deb7b293ad0033f6b https://www.encodeproject.org/files/ENCFF000PEV/@@download/ENCFF000PEV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PFD/ released low read length, low read depth biological replicates with identical biosample ENCFF000PFC fastq reads ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1974985606 Richard Myers, HAIB 1f1430164e94b694c0e73e3c75c17f40 https://www.encodeproject.org/files/ENCFF000PFC/@@download/ENCFF000PFC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PFD/ released low read length, low read depth biological replicates with identical biosample ENCFF001UFA bed broadPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 596743 Richard Myers, HAIB c92bc86c9ef297a7c22e36b40fbbc1c5 https://www.encodeproject.org/files/ENCFF001UFA/@@download/ENCFF001UFA.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UFB bed broadPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 842109 Richard Myers, HAIB 9007f2859f06f0e7c4f1a2367d17b534 https://www.encodeproject.org/files/ENCFF001UFB/@@download/ENCFF001UFB.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CJZ bed narrowPeak optimal idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 540314 ENCODE Consortium Analysis Working Group b6c82f6bd9f4c1331f8fbf50a9fae549 https://www.encodeproject.org/files/ENCFF002CJZ/@@download/ENCFF002CJZ.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF573RQE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CJZ 1484023 ENCODE Consortium 137bc9c878202f8a3bca0226ca6a2b06 https://www.encodeproject.org/files/ENCFF573RQE/@@download/ENCFF573RQE.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF178WZP bam unfiltered alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEV, ENCFF643CGH 1913323412 ENCODE Processing Pipeline 48d998e114a2366fa41bce67b491f228 https://www.encodeproject.org/files/ENCFF178WZP/@@download/ENCFF178WZP.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF869FPY bam unfiltered alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFC, ENCFF643CGH 2270845934 ENCODE Processing Pipeline 45903ff6b77b896bc86b6d55194c429e https://www.encodeproject.org/files/ENCFF869FPY/@@download/ENCFF869FPY.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF436YTR bam alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEV, ENCFF643CGH 810431504 ENCODE Processing Pipeline c02ffc7e00d5852a7bdb6c29bb266370 https://www.encodeproject.org/files/ENCFF436YTR/@@download/ENCFF436YTR.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF141DVZ bam alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFC, ENCFF643CGH 867946707 ENCODE Processing Pipeline 821afb98ff8237a5131db631c8b5ff01 https://www.encodeproject.org/files/ENCFF141DVZ/@@download/ENCFF141DVZ.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF742BAZ bam unfiltered alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEV, ENCFF807MUK 1910063634 ENCODE Processing Pipeline b03734e7e1e0c58689cdfc79fd1e96e8 https://www.encodeproject.org/files/ENCFF742BAZ/@@download/ENCFF742BAZ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF452GJT bam alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEV, ENCFF807MUK 810983984 ENCODE Processing Pipeline 692d2b6bdf16f4491f5efec6888929fb https://www.encodeproject.org/files/ENCFF452GJT/@@download/ENCFF452GJT.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF800ZGL bam unfiltered alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFC, ENCFF807MUK 2268208212 ENCODE Processing Pipeline 3de37fd7c0b3562e0dad60eacf882532 https://www.encodeproject.org/files/ENCFF800ZGL/@@download/ENCFF800ZGL.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF713XOH bam alignments ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PFC, ENCFF807MUK 868558871 ENCODE Processing Pipeline c45086b93402ebb84c21c715f57e3669 https://www.encodeproject.org/files/ENCFF713XOH/@@download/ENCFF713XOH.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF723OFE bigWig signal p-value ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF436YTR 392213885 ENCODE Processing Pipeline 6234adee2fe02b7ca2a889fb8ae9ceee https://www.encodeproject.org/files/ENCFF723OFE/@@download/ENCFF723OFE.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF926QMN bigWig signal p-value ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF141DVZ, ENCFF202PGY 450083271 ENCODE Processing Pipeline 61f6b57c4df02f151cf3bc9f2e568222 https://www.encodeproject.org/files/ENCFF926QMN/@@download/ENCFF926QMN.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF251KNS bed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF141DVZ, ENCFF202PGY, ENCFF436YTR 6914708 ENCODE Processing Pipeline 134fc2d94ffd6ffdb1260a6c5902dd14 https://www.encodeproject.org/files/ENCFF251KNS/@@download/ENCFF251KNS.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF246QVY bed narrowPeak optimal idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF098VGF, ENCFF137AHY, ENCFF251KNS, ENCFF419RSJ 660195 ENCODE Processing Pipeline 60c2b35b96e4bb623a68c317359893e9 https://www.encodeproject.org/files/ENCFF246QVY/@@download/ENCFF246QVY.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF812PHN bigWig signal p-value ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF141DVZ, ENCFF202PGY, ENCFF436YTR 510265378 ENCODE Processing Pipeline d98ca546120248592b19bbddcb6da78f https://www.encodeproject.org/files/ENCFF812PHN/@@download/ENCFF812PHN.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF841KFL bigBed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF137AHY 11896443 ENCODE Processing Pipeline ab854e509af9ea79e805fa01a7820c06 https://www.encodeproject.org/files/ENCFF841KFL/@@download/ENCFF841KFL.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF636PWI bed narrowPeak conservative idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF098VGF, ENCFF137AHY, ENCFF251KNS, ENCFF419RSJ 593449 ENCODE Processing Pipeline 11bc427ee22065fcb596ec371addb205 https://www.encodeproject.org/files/ENCFF636PWI/@@download/ENCFF636PWI.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF309DHX bigWig fold change over control ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF436YTR 314498787 ENCODE Processing Pipeline ed755a6582b178bd8e3fb205477609dc https://www.encodeproject.org/files/ENCFF309DHX/@@download/ENCFF309DHX.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF285WUX bigWig fold change over control ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF141DVZ, ENCFF202PGY 288995354 ENCODE Processing Pipeline 911e7d7069f38cae22ac493cecdb40e0 https://www.encodeproject.org/files/ENCFF285WUX/@@download/ENCFF285WUX.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF144IVU bigWig fold change over control ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF141DVZ, ENCFF202PGY, ENCFF436YTR 513662390 ENCODE Processing Pipeline a02a846f452ace89709b827a6d891d34 https://www.encodeproject.org/files/ENCFF144IVU/@@download/ENCFF144IVU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF098VGF bed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF202PGY, ENCFF436YTR 6335185 ENCODE Processing Pipeline bb7a14498c3bc435902d04615ac8560e https://www.encodeproject.org/files/ENCFF098VGF/@@download/ENCFF098VGF.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF137AHY bed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF141DVZ, ENCFF202PGY 6421630 ENCODE Processing Pipeline f77a23f1d7d582a195f7edee10f341b9 https://www.encodeproject.org/files/ENCFF137AHY/@@download/ENCFF137AHY.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF309ZKY bigBed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF098VGF 12066573 ENCODE Processing Pipeline 4651892e3786f053c0833cda335f6595 https://www.encodeproject.org/files/ENCFF309ZKY/@@download/ENCFF309ZKY.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF131USR bigBed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF251KNS 11976969 ENCODE Processing Pipeline f3b1dfbb2351d3c639f86fabdcd20875 https://www.encodeproject.org/files/ENCFF131USR/@@download/ENCFF131USR.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF888SJW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF636PWI 1272825 ENCODE Processing Pipeline 01216a4297464e832e5735ad54ff81f9 https://www.encodeproject.org/files/ENCFF888SJW/@@download/ENCFF888SJW.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF017MYM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF246QVY 1387845 ENCODE Processing Pipeline d9a76e94b911611819d7c1de81a2d1cb https://www.encodeproject.org/files/ENCFF017MYM/@@download/ENCFF017MYM.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF016XGN bigWig fold change over control ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF044MEQ, ENCFF452GJT 312755489 ENCODE Processing Pipeline 1934c327347445bd8406aab37c16d04c https://www.encodeproject.org/files/ENCFF016XGN/@@download/ENCFF016XGN.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF374EGI bigWig signal p-value ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044MEQ, ENCFF713XOH 458761473 ENCODE Processing Pipeline f1ca6a5cdd4aa839d64c7d1caefef609 https://www.encodeproject.org/files/ENCFF374EGI/@@download/ENCFF374EGI.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF606SEK bigWig signal p-value ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044MEQ, ENCFF452GJT, ENCFF713XOH 512240055 ENCODE Processing Pipeline 555d3b7a857ce1651ea2a7f90a8332d4 https://www.encodeproject.org/files/ENCFF606SEK/@@download/ENCFF606SEK.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF020STC bigWig fold change over control ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044MEQ, ENCFF713XOH 288495502 ENCODE Processing Pipeline 7ee3e58d1a2ea063d676a6f5f3c0c974 https://www.encodeproject.org/files/ENCFF020STC/@@download/ENCFF020STC.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF959MZN bigWig fold change over control ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044MEQ, ENCFF452GJT, ENCFF713XOH 507126494 ENCODE Processing Pipeline 1b988796d6b1c84581850fbae34e1aa7 https://www.encodeproject.org/files/ENCFF959MZN/@@download/ENCFF959MZN.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF193MSK bed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044MEQ, ENCFF713XOH 6563800 ENCODE Processing Pipeline 7d95b8c9e2794e78e81e6e4a4954270c https://www.encodeproject.org/files/ENCFF193MSK/@@download/ENCFF193MSK.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF874QGO bed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044MEQ, ENCFF452GJT, ENCFF713XOH 7036626 ENCODE Processing Pipeline 1fe149b6a2f0e3b3ae9c0d6631bd2bb8 https://www.encodeproject.org/files/ENCFF874QGO/@@download/ENCFF874QGO.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF835EUG bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF338FAD 1297181 ENCODE Processing Pipeline 59344468875ba7dceb95e5c083aa4cfa https://www.encodeproject.org/files/ENCFF835EUG/@@download/ENCFF835EUG.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF918OBX bigWig signal p-value ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF044MEQ, ENCFF452GJT 428137431 ENCODE Processing Pipeline 405aadb79ba25292c5052cbd4124d3fa https://www.encodeproject.org/files/ENCFF918OBX/@@download/ENCFF918OBX.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF926API bigBed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF107ZNB 12280162 ENCODE Processing Pipeline 3369a7dbe1a9aeb346e7407849a5e9f6 https://www.encodeproject.org/files/ENCFF926API/@@download/ENCFF926API.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF338FAD bed narrowPeak conservative idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF107ZNB, ENCFF193MSK, ENCFF874QGO 607857 ENCODE Processing Pipeline 731ff81a0d84b189aacd76c410853c64 https://www.encodeproject.org/files/ENCFF338FAD/@@download/ENCFF338FAD.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF107ZNB bed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF044MEQ, ENCFF452GJT 6516602 ENCODE Processing Pipeline 3d124dcf08a60fb0a2030cbc4af0b7a4 https://www.encodeproject.org/files/ENCFF107ZNB/@@download/ENCFF107ZNB.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF159FMQ bigBed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193MSK 12063393 ENCODE Processing Pipeline 82ebcb87c05793782d504516ca9db7ed https://www.encodeproject.org/files/ENCFF159FMQ/@@download/ENCFF159FMQ.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF417LLT bed narrowPeak optimal idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF107ZNB, ENCFF193MSK, ENCFF874QGO 681094 ENCODE Processing Pipeline 08061d9c15cd95cc4cbd862a4cb2617b https://www.encodeproject.org/files/ENCFF417LLT/@@download/ENCFF417LLT.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF889BAR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF417LLT 1421762 ENCODE Processing Pipeline 1e6a7300f28cddf639750f0de0cc548b https://www.encodeproject.org/files/ENCFF889BAR/@@download/ENCFF889BAR.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF186HFF bigBed narrowPeak peaks ENCSR000BGO ChIP-seq EFO:0002791 HeLa-S3 immortalized cell line adult female 31 year Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF874QGO 12124085 ENCODE Processing Pipeline 0939cade2669005d59990de260d973d0 https://www.encodeproject.org/files/ENCFF186HFF/@@download/ENCFF186HFF.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF515YST fastq reads ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 1 50 single-ended 1539561612 Richard Myers, HAIB 33670742be9480e9ce99e8da7efce1c2 SRA:SRR5338965 https://www.encodeproject.org/files/ENCFF515YST/@@download/ENCFF515YST.fastq.gz HiSeq 2000 /files/ENCFF002BGB/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF644JIO fastq reads ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 1 50 single-ended 1186636132 Richard Myers, HAIB 71999396ce8452e8ed4d17f3db768d1d SRA:SRR5338964 https://www.encodeproject.org/files/ENCFF644JIO/@@download/ENCFF644JIO.fastq.gz HiSeq 2000 /files/ENCFF002BGC/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF391CGQ bam alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 50 ENCFF644JIO, ENCFF807MUK 975414658 ENCODE Processing Pipeline ed8f8fc0178028b2ef565a769a1f6f25 https://www.encodeproject.org/files/ENCFF391CGQ/@@download/ENCFF391CGQ.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF892CVA bam alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 50 ENCFF515YST, ENCFF807MUK 1202776767 ENCODE Processing Pipeline eedbe083eb9d66ae986e0c249c31b829 https://www.encodeproject.org/files/ENCFF892CVA/@@download/ENCFF892CVA.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF705SNM bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF092ACZ, ENCFF391CGQ, ENCFF839YOM, ENCFF892CVA 1032955089 ENCODE Processing Pipeline 3b96af1b3741ef84aabba2cd5604c10b https://www.encodeproject.org/files/ENCFF705SNM/@@download/ENCFF705SNM.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF217LOT bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF391CGQ, ENCFF839YOM 411464311 ENCODE Processing Pipeline 04914c008f47bedd52dfade2e9b47fe5 https://www.encodeproject.org/files/ENCFF217LOT/@@download/ENCFF217LOT.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF908OKZ bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF391CGQ, ENCFF839YOM 609117254 ENCODE Processing Pipeline 3e144f733eff1f54c48d981c7781d31b https://www.encodeproject.org/files/ENCFF908OKZ/@@download/ENCFF908OKZ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF281EQZ bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF092ACZ, ENCFF892CVA 676342354 ENCODE Processing Pipeline b46c4ab074bd1e5d099f57cbcc9e225f https://www.encodeproject.org/files/ENCFF281EQZ/@@download/ENCFF281EQZ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF736QLP bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF092ACZ, ENCFF892CVA 488867918 ENCODE Processing Pipeline 1de5e738021e6a011a2742884829af12 https://www.encodeproject.org/files/ENCFF736QLP/@@download/ENCFF736QLP.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF720CPE bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF092ACZ, ENCFF391CGQ, ENCFF839YOM, ENCFF892CVA 972242931 ENCODE Processing Pipeline 55c26f27069efb65a4e97c39b7efd69b https://www.encodeproject.org/files/ENCFF720CPE/@@download/ENCFF720CPE.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF036XUT bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF391CGQ, ENCFF839YOM 5615415 ENCODE Processing Pipeline 8ec609e5c76e3654b83a78aa48ca28df https://www.encodeproject.org/files/ENCFF036XUT/@@download/ENCFF036XUT.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF168TPC bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF036XUT 11051055 ENCODE Processing Pipeline f08aae6363fab64b6a748c4230f7f792 https://www.encodeproject.org/files/ENCFF168TPC/@@download/ENCFF168TPC.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF203RIX bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF092ACZ, ENCFF892CVA 6101217 ENCODE Processing Pipeline 2b667f7cea970efbae93119444958cfc https://www.encodeproject.org/files/ENCFF203RIX/@@download/ENCFF203RIX.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF376GWL bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF092ACZ, ENCFF391CGQ, ENCFF839YOM, ENCFF892CVA 7028925 ENCODE Processing Pipeline 6d7659075d867d6b71f53e8a00bea550 https://www.encodeproject.org/files/ENCFF376GWL/@@download/ENCFF376GWL.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments, mismatched status ENCFF905ADK bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF203RIX 13243726 ENCODE Processing Pipeline 51e2feebcca2497030ee6736362e9206 https://www.encodeproject.org/files/ENCFF905ADK/@@download/ENCFF905ADK.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF876AZW bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF376GWL 13201225 ENCODE Processing Pipeline 7fe8a2c4ad2a8a924499251184c15d7f https://www.encodeproject.org/files/ENCFF876AZW/@@download/ENCFF876AZW.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF497WWQ bam unfiltered alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 50 ENCFF643CGH, ENCFF644JIO 1300934913 ENCODE Processing Pipeline b309361282da0a7f852f2da892b3ded9 https://www.encodeproject.org/files/ENCFF497WWQ/@@download/ENCFF497WWQ.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF280MYH bam unfiltered alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 50 ENCFF515YST, ENCFF643CGH 1662701792 ENCODE Processing Pipeline e4ffb8ecbccbb5b4f644c06802533e6a https://www.encodeproject.org/files/ENCFF280MYH/@@download/ENCFF280MYH.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF011XRF bam alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 50 ENCFF643CGH, ENCFF644JIO 975007019 ENCODE Processing Pipeline 15d5e4c080f760145489bb7b69c3a5db https://www.encodeproject.org/files/ENCFF011XRF/@@download/ENCFF011XRF.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF812KIP bam alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 50 ENCFF515YST, ENCFF643CGH 1202267595 ENCODE Processing Pipeline 14f84bc03e5a78a95522f7770431b0aa https://www.encodeproject.org/files/ENCFF812KIP/@@download/ENCFF812KIP.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF472QBL bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF011XRF, ENCFF709XAA 553089199 ENCODE Processing Pipeline 20432fa59f6b5d8a62f4c43d524b60ec https://www.encodeproject.org/files/ENCFF472QBL/@@download/ENCFF472QBL.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF796KDJ bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF285EWB, ENCFF812KIP 561963349 ENCODE Processing Pipeline 6b6d2def18c139dde1a51eb3450cb268 https://www.encodeproject.org/files/ENCFF796KDJ/@@download/ENCFF796KDJ.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF198AJC bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF011XRF, ENCFF285EWB, ENCFF709XAA, ENCFF812KIP 1034774088 ENCODE Processing Pipeline e5a708fcdfed961fa742cd8983294244 https://www.encodeproject.org/files/ENCFF198AJC/@@download/ENCFF198AJC.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF410VFY bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF011XRF, ENCFF709XAA 410942731 ENCODE Processing Pipeline 2889c2aca4f5e3037e5e36d78f9c3f3c https://www.encodeproject.org/files/ENCFF410VFY/@@download/ENCFF410VFY.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF604SPG bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF285EWB, ENCFF812KIP 492106588 ENCODE Processing Pipeline 75c32d6d44e558fed10c5e2e20cc69a6 https://www.encodeproject.org/files/ENCFF604SPG/@@download/ENCFF604SPG.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF185TTH bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF011XRF, ENCFF285EWB, ENCFF709XAA, ENCFF812KIP 996114127 ENCODE Processing Pipeline 355adcc96b51329a77621556eb2ef84f https://www.encodeproject.org/files/ENCFF185TTH/@@download/ENCFF185TTH.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF157SQN bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF285EWB, ENCFF812KIP 5841730 ENCODE Processing Pipeline effa89adbba74efcd57568b3796df7c9 https://www.encodeproject.org/files/ENCFF157SQN/@@download/ENCFF157SQN.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF246VDU bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF011XRF, ENCFF709XAA 5331491 ENCODE Processing Pipeline 547153566bb601110b982ec6211d9a1b https://www.encodeproject.org/files/ENCFF246VDU/@@download/ENCFF246VDU.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF560AQD bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF011XRF, ENCFF285EWB, ENCFF709XAA, ENCFF812KIP 6903840 ENCODE Processing Pipeline e6f01f1ac4b374a039812285aca29452 https://www.encodeproject.org/files/ENCFF560AQD/@@download/ENCFF560AQD.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF324JON bigBed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF049YPY 143881 ENCODE Processing Pipeline 6982cbcd950ac3771ce574d96800acbd https://www.encodeproject.org/files/ENCFF324JON/@@download/ENCFF324JON.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF867UFX bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF157SQN 13209974 ENCODE Processing Pipeline 4e1c99a4dce6fffdbbb4bfdae064230b https://www.encodeproject.org/files/ENCFF867UFX/@@download/ENCFF867UFX.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF437PVP bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF560AQD 13205323 ENCODE Processing Pipeline 811ace92fb24a273b1b6e58b11b0c908 https://www.encodeproject.org/files/ENCFF437PVP/@@download/ENCFF437PVP.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF388VTY bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF246VDU 11007204 ENCODE Processing Pipeline 1b606e4e0f2283d4fba5af9b5a0631b1 https://www.encodeproject.org/files/ENCFF388VTY/@@download/ENCFF388VTY.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF049YPY bed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF157SQN, ENCFF246VDU, ENCFF419RSJ, ENCFF560AQD 56619 ENCODE Processing Pipeline 29a3ffe5a110a514e48acc2db47dcc5e https://www.encodeproject.org/files/ENCFF049YPY/@@download/ENCFF049YPY.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF091MQJ bed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF157SQN, ENCFF246VDU, ENCFF419RSJ, ENCFF560AQD 66220 ENCODE Processing Pipeline 5c2f1d696ec866604a2f43624f6b8839 https://www.encodeproject.org/files/ENCFF091MQJ/@@download/ENCFF091MQJ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF222JOO bigBed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF091MQJ 157175 ENCODE Processing Pipeline 69b6b2490672e867a285ffe7227f186b https://www.encodeproject.org/files/ENCFF222JOO/@@download/ENCFF222JOO.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF693TKE bed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF036XUT, ENCFF203RIX, ENCFF376GWL 47781 ENCODE Processing Pipeline 9d336ceb18616e24ae5b0a2ef5bf40f6 https://www.encodeproject.org/files/ENCFF693TKE/@@download/ENCFF693TKE.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF797TMQ bigBed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF693TKE 131458 ENCODE Processing Pipeline bc293df0984bd272cc73645505ea05fd https://www.encodeproject.org/files/ENCFF797TMQ/@@download/ENCFF797TMQ.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF820QQB bed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF036XUT, ENCFF203RIX, ENCFF376GWL 62557 ENCODE Processing Pipeline 43b076b85a81a461a35791d676746a2a https://www.encodeproject.org/files/ENCFF820QQB/@@download/ENCFF820QQB.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF243XXG bigBed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF820QQB 150387 ENCODE Processing Pipeline 45e1094dd2010a550ea64a33c2b7fbec https://www.encodeproject.org/files/ENCFF243XXG/@@download/ENCFF243XXG.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF100SGJ fastq reads ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 1 50 single-ended 1546790653 Richard Myers, HAIB 298f825295fcec7de481afb182a90441 SRA:SRR5339320 https://www.encodeproject.org/files/ENCFF100SGJ/@@download/ENCFF100SGJ.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF821MJN fastq reads ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 1 50 single-ended 1186717752 Richard Myers, HAIB 404c266467c42448ce5252f8f669b34f SRA:SRR5339319 https://www.encodeproject.org/files/ENCFF821MJN/@@download/ENCFF821MJN.fastq.gz HiSeq 2000 /files/ENCFF913JVQ/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF889JSZ bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF100SGJ, ENCFF807MUK 1270080293 ENCODE Processing Pipeline b7ba1221d69865414ce4d8a84e7e6993 https://www.encodeproject.org/files/ENCFF889JSZ/@@download/ENCFF889JSZ.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF193ALV bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF807MUK, ENCFF821MJN 935800845 ENCODE Processing Pipeline b6d267b7a4d3cc10a23cda6eb91cecc0 https://www.encodeproject.org/files/ENCFF193ALV/@@download/ENCFF193ALV.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF227WDE bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF061QOJ, ENCFF095BVD, ENCFF444TNY, ENCFF709WYV 1243004184 ENCODE Processing Pipeline 2c50fe58b2f5ff8807db659277a27d21 https://www.encodeproject.org/files/ENCFF227WDE/@@download/ENCFF227WDE.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF511DBK bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF061QOJ, ENCFF095BVD, ENCFF444TNY, ENCFF709WYV 1162467224 ENCODE Processing Pipeline 066faeb51bada5d4dececabecbdda61a https://www.encodeproject.org/files/ENCFF511DBK/@@download/ENCFF511DBK.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF610YQQ bam unfiltered alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 50 ENCFF100SGJ, ENCFF643CGH 1666388255 ENCODE Processing Pipeline 95a79814b865500d67388f92bea8eb92 https://www.encodeproject.org/files/ENCFF610YQQ/@@download/ENCFF610YQQ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF921PES bam unfiltered alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 50 ENCFF643CGH, ENCFF821MJN 1281209292 ENCODE Processing Pipeline cfac68a8a19bc7d27a07fc12c97a91c0 https://www.encodeproject.org/files/ENCFF921PES/@@download/ENCFF921PES.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF512YJL bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 50 ENCFF100SGJ, ENCFF643CGH 1269599344 ENCODE Processing Pipeline af7a13a094cbfc65d61861c8592d4ce2 https://www.encodeproject.org/files/ENCFF512YJL/@@download/ENCFF512YJL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF090SFR bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 50 ENCFF643CGH, ENCFF821MJN 935341586 ENCODE Processing Pipeline 5b5bc93902c434023216b2e1d7183707 https://www.encodeproject.org/files/ENCFF090SFR/@@download/ENCFF090SFR.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF357LSR bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF332SVJ, ENCFF512YJL 750080504 ENCODE Processing Pipeline f07e4f18b13224212ade3646186e3c74 https://www.encodeproject.org/files/ENCFF357LSR/@@download/ENCFF357LSR.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF726ECH bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF090SFR, ENCFF162ZOO 639782931 ENCODE Processing Pipeline 97be04a52d6b96b1b43ceb6ac357d0a9 https://www.encodeproject.org/files/ENCFF726ECH/@@download/ENCFF726ECH.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF248DQQ bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF090SFR, ENCFF162ZOO, ENCFF332SVJ, ENCFF512YJL 1346948777 ENCODE Processing Pipeline de0cabd609e841b44980a9358a10b873 https://www.encodeproject.org/files/ENCFF248DQQ/@@download/ENCFF248DQQ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF656EDK bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF332SVJ, ENCFF512YJL 592001584 ENCODE Processing Pipeline 0fd9b463db909f30b094ae284202c63c https://www.encodeproject.org/files/ENCFF656EDK/@@download/ENCFF656EDK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF956ZZP bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF090SFR, ENCFF162ZOO 454917758 ENCODE Processing Pipeline 883617aa522a5a4e6d0a9d6a9cd3ceba https://www.encodeproject.org/files/ENCFF956ZZP/@@download/ENCFF956ZZP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF694DDU bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF090SFR, ENCFF162ZOO, ENCFF332SVJ, ENCFF512YJL 1157982636 ENCODE Processing Pipeline 7fa9a19f242307aff00937625e23a6b7 https://www.encodeproject.org/files/ENCFF694DDU/@@download/ENCFF694DDU.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF867NYH bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF090SFR, ENCFF162ZOO, ENCFF332SVJ, ENCFF512YJL 6694469 ENCODE Processing Pipeline 4443b2f52359735db8559ae5077158e0 https://www.encodeproject.org/files/ENCFF867NYH/@@download/ENCFF867NYH.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF823FMJ bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF736LSP 11199060 ENCODE Processing Pipeline 979bf518c0f732ed92271ecb824690a6 https://www.encodeproject.org/files/ENCFF823FMJ/@@download/ENCFF823FMJ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF883ODA bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF867NYH 13454735 ENCODE Processing Pipeline 02bbc011d1667b4493927a3165083b48 https://www.encodeproject.org/files/ENCFF883ODA/@@download/ENCFF883ODA.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF529CTW bed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF736LSP, ENCFF867NYH, ENCFF953QWL 59369 ENCODE Processing Pipeline f559647127a153384e1d0729e29ada42 https://www.encodeproject.org/files/ENCFF529CTW/@@download/ENCFF529CTW.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF736LSP bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF332SVJ, ENCFF512YJL 5584155 ENCODE Processing Pipeline 5a0a61ede9d89286e74f9a63e52525c6 https://www.encodeproject.org/files/ENCFF736LSP/@@download/ENCFF736LSP.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF953QWL bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF090SFR, ENCFF162ZOO 5515829 ENCODE Processing Pipeline a6559f06dba3b2a1a7967c0b4a061391 https://www.encodeproject.org/files/ENCFF953QWL/@@download/ENCFF953QWL.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF382HOA bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF953QWL 13292286 ENCODE Processing Pipeline c0e8880f4ec651fc817fcb45862acf0d https://www.encodeproject.org/files/ENCFF382HOA/@@download/ENCFF382HOA.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF123BAT bigBed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF529CTW 152155 ENCODE Processing Pipeline a3b38fdb4b6a4cf9236546426a70f067 https://www.encodeproject.org/files/ENCFF123BAT/@@download/ENCFF123BAT.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF739XTO bed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF736LSP, ENCFF867NYH, ENCFF953QWL 92277 ENCODE Processing Pipeline 6a857de42db30576df96a5224a3d56b8 https://www.encodeproject.org/files/ENCFF739XTO/@@download/ENCFF739XTO.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF521NPG bigBed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF739XTO 238627 ENCODE Processing Pipeline 8bd98c30b2d23236869bddb101dd3a2c https://www.encodeproject.org/files/ENCFF521NPG/@@download/ENCFF521NPG.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF337DCW bam unfiltered alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 50 ENCFF100SGJ, ENCFF807MUK 1662727921 ENCODE Processing Pipeline 8496922bc56221a4c2aa458b9fbc667c https://www.encodeproject.org/files/ENCFF337DCW/@@download/ENCFF337DCW.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF394DYO bam unfiltered alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 50 ENCFF807MUK, ENCFF821MJN 1277189234 ENCODE Processing Pipeline 7a2552505f86daddd44fbc94e096bef9 https://www.encodeproject.org/files/ENCFF394DYO/@@download/ENCFF394DYO.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF709WYV bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 50 ENCFF807MUK, ENCFF821MJN 935800873 ENCODE Processing Pipeline bfbe82c03beea28731796ebbef77ea27 https://www.encodeproject.org/files/ENCFF709WYV/@@download/ENCFF709WYV.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF095BVD bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 50 ENCFF100SGJ, ENCFF807MUK 1270080323 ENCODE Processing Pipeline d942c8de90f3447fa116ba07c8071eaa https://www.encodeproject.org/files/ENCFF095BVD/@@download/ENCFF095BVD.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF269XNA bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF061QOJ, ENCFF095BVD 603917166 ENCODE Processing Pipeline 29253956a0b148f013da763c8dfa0958 https://www.encodeproject.org/files/ENCFF269XNA/@@download/ENCFF269XNA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF997SXB bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF061QOJ, ENCFF095BVD 5589037 ENCODE Processing Pipeline decbba0f1d48cd087724ff92cac4575c https://www.encodeproject.org/files/ENCFF997SXB/@@download/ENCFF997SXB.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF325KGM bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF061QOJ, ENCFF095BVD, ENCFF444TNY, ENCFF709WYV 6693331 ENCODE Processing Pipeline 8426882f9c1e9f96649011903ff68939 https://www.encodeproject.org/files/ENCFF325KGM/@@download/ENCFF325KGM.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF267VFV bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF997SXB 11195455 ENCODE Processing Pipeline b5e49fa03f0ee1947f77e1119c74ca44 https://www.encodeproject.org/files/ENCFF267VFV/@@download/ENCFF267VFV.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF127XOZ bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF444TNY, ENCFF709WYV 5234413 ENCODE Processing Pipeline 2540b3700f187069edc19cf750478f22 https://www.encodeproject.org/files/ENCFF127XOZ/@@download/ENCFF127XOZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF687TKV bigBed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF209OUI 150782 ENCODE Processing Pipeline 0099b0118ab442e371675e53ee89fa3f https://www.encodeproject.org/files/ENCFF687TKV/@@download/ENCFF687TKV.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF316GIH bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF061QOJ, ENCFF095BVD 851354104 ENCODE Processing Pipeline 56bbd96e26eebfc14baffdd1f2aa0b08 https://www.encodeproject.org/files/ENCFF316GIH/@@download/ENCFF316GIH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF051BIA bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF444TNY, ENCFF709WYV 420026095 ENCODE Processing Pipeline 86c7ad4048a32ab7ac6541b063e2d2b5 https://www.encodeproject.org/files/ENCFF051BIA/@@download/ENCFF051BIA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF568VQS bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF127XOZ 13211674 ENCODE Processing Pipeline 4177a56cb224a764fe3c6165b932152b https://www.encodeproject.org/files/ENCFF568VQS/@@download/ENCFF568VQS.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF368FRQ bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF325KGM 13441918 ENCODE Processing Pipeline a2e3e42059607c3e3d65b5256420b06d https://www.encodeproject.org/files/ENCFF368FRQ/@@download/ENCFF368FRQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF209OUI bed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF127XOZ, ENCFF325KGM, ENCFF997SXB 59020 ENCODE Processing Pipeline 5ab02af87b3770c3fb0b0d8b956220e9 https://www.encodeproject.org/files/ENCFF209OUI/@@download/ENCFF209OUI.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF491ERB bigBed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF426DUB 241770 ENCODE Processing Pipeline 10616fb9d5417123934677f1cd8be1b2 https://www.encodeproject.org/files/ENCFF491ERB/@@download/ENCFF491ERB.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF604ULO bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF444TNY, ENCFF709WYV 568843484 ENCODE Processing Pipeline 4e509084d389c2323cbf08880677b9fe https://www.encodeproject.org/files/ENCFF604ULO/@@download/ENCFF604ULO.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF426DUB bed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF127XOZ, ENCFF325KGM, ENCFF997SXB 95173 ENCODE Processing Pipeline 9f0888598e4c0a94620276153bf94d46 https://www.encodeproject.org/files/ENCFF426DUB/@@download/ENCFF426DUB.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF769ICW fastq reads ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 1 50 single-ended 1460220366 Richard Myers, HAIB 4b8b1559f8ada4eaedd15062cd285234 SRA:SRR5339662 https://www.encodeproject.org/files/ENCFF769ICW/@@download/ENCFF769ICW.fastq.gz HiSeq 2000 /files/ENCFF958NMQ/ released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF188ZYE fastq reads ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 1 50 single-ended 773437785 Richard Myers, HAIB 0338429bd16137142debb1bc4ad815d8 SRA:SRR5339661 https://www.encodeproject.org/files/ENCFF188ZYE/@@download/ENCFF188ZYE.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF776IMT bam alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 50 ENCFF188ZYE, ENCFF807MUK 664998125 ENCODE Processing Pipeline 94015738bef00c905b8093d5bb9a0bd0 https://www.encodeproject.org/files/ENCFF776IMT/@@download/ENCFF776IMT.bam hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF805KOB bam alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 50 ENCFF769ICW, ENCFF807MUK 1199184691 ENCODE Processing Pipeline 563fd495c4ec69cda385dc677d313a70 https://www.encodeproject.org/files/ENCFF805KOB/@@download/ENCFF805KOB.bam hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF922MJG bigWig fold change over control ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF654EHF, ENCFF776IMT, ENCFF805KOB, ENCFF991UTU 1181603649 ENCODE Processing Pipeline 61359517c07aaddb777f50f4d4e9a1b6 https://www.encodeproject.org/files/ENCFF922MJG/@@download/ENCFF922MJG.bigWig hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF700FGO bigWig signal p-value ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF654EHF, ENCFF776IMT, ENCFF991UTU 832559794 ENCODE Processing Pipeline 683a33e74212fc8655b2c421b45a60b2 https://www.encodeproject.org/files/ENCFF700FGO/@@download/ENCFF700FGO.bigWig hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF307EAB bigWig signal p-value ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF654EHF, ENCFF776IMT, ENCFF805KOB, ENCFF991UTU 1056294787 ENCODE Processing Pipeline 4aef4e99c2405d43a7a9a4bda164e57d https://www.encodeproject.org/files/ENCFF307EAB/@@download/ENCFF307EAB.bigWig hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF883GIY bigWig signal p-value ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF654EHF, ENCFF805KOB, ENCFF991UTU 955639882 ENCODE Processing Pipeline b0625bdfee66026b3e9102ea0bc95e38 https://www.encodeproject.org/files/ENCFF883GIY/@@download/ENCFF883GIY.bigWig hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF633YHS bigWig fold change over control ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF654EHF, ENCFF805KOB, ENCFF991UTU 876517941 ENCODE Processing Pipeline ece0536876033d7e50f7ac728edd2999 https://www.encodeproject.org/files/ENCFF633YHS/@@download/ENCFF633YHS.bigWig hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF295IKV bigBed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF579AYO 13097208 ENCODE Processing Pipeline 67ab36092178edff892648c995ad5907 https://www.encodeproject.org/files/ENCFF295IKV/@@download/ENCFF295IKV.bigBed hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF033ZJQ bigBed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF642PNJ 13347501 ENCODE Processing Pipeline a599bd8067dedeacdb6c9ab3b6b9db68 https://www.encodeproject.org/files/ENCFF033ZJQ/@@download/ENCFF033ZJQ.bigBed hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF428MAV bigBed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF396QYK 13217570 ENCODE Processing Pipeline b9cadaa3a600c7fcae4a8a25486b79c1 https://www.encodeproject.org/files/ENCFF428MAV/@@download/ENCFF428MAV.bigBed hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF045WZW bigWig fold change over control ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF654EHF, ENCFF776IMT, ENCFF991UTU 669875978 ENCODE Processing Pipeline 34080185ec423e7cce3169c89d66695a https://www.encodeproject.org/files/ENCFF045WZW/@@download/ENCFF045WZW.bigWig hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF396QYK bed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF654EHF, ENCFF776IMT, ENCFF805KOB, ENCFF991UTU 6979244 ENCODE Processing Pipeline 658e252cf72ec4a16065ef0e57aaf02f https://www.encodeproject.org/files/ENCFF396QYK/@@download/ENCFF396QYK.bed.gz hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF579AYO bed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF654EHF, ENCFF776IMT, ENCFF991UTU 6497543 ENCODE Processing Pipeline edb26bc092e26f4bc99fed9e119d9990 https://www.encodeproject.org/files/ENCFF579AYO/@@download/ENCFF579AYO.bed.gz hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF642PNJ bed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF654EHF, ENCFF805KOB, ENCFF991UTU 6798252 ENCODE Processing Pipeline 26d75710470840306cb32104ceea008c https://www.encodeproject.org/files/ENCFF642PNJ/@@download/ENCFF642PNJ.bed.gz hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF637UGC bam unfiltered alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 50 ENCFF188ZYE, ENCFF807MUK 853399389 ENCODE Processing Pipeline 847d117a1eecd03aaf118970010df081 https://www.encodeproject.org/files/ENCFF637UGC/@@download/ENCFF637UGC.bam hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF772NWF bam unfiltered alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 50 ENCFF769ICW, ENCFF807MUK 1614530005 ENCODE Processing Pipeline 9c39efbb0b12f19fad9dcb03d1eea99c https://www.encodeproject.org/files/ENCFF772NWF/@@download/ENCFF772NWF.bam hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF567MOA bam alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 50 ENCFF188ZYE, ENCFF807MUK 664998153 ENCODE Processing Pipeline b6ef2a0b32f524937a7286de6b30cc39 https://www.encodeproject.org/files/ENCFF567MOA/@@download/ENCFF567MOA.bam hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF226JIO bam alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 50 ENCFF769ICW, ENCFF807MUK 1199184720 ENCODE Processing Pipeline 007a10b14c1a3a767be39fab57f36900 https://www.encodeproject.org/files/ENCFF226JIO/@@download/ENCFF226JIO.bam hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF525UUL bam unfiltered alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 50 ENCFF188ZYE, ENCFF643CGH 857030000 ENCODE Processing Pipeline 811caabfa988f5ff4fdc1d310b1fcecb https://www.encodeproject.org/files/ENCFF525UUL/@@download/ENCFF525UUL.bam GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF028ZVJ bam unfiltered alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 50 ENCFF643CGH, ENCFF769ICW 1621643142 ENCODE Processing Pipeline 0211bdf49c4e0811b4987944b7c6f413 https://www.encodeproject.org/files/ENCFF028ZVJ/@@download/ENCFF028ZVJ.bam GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF550RLX bam alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 50 ENCFF188ZYE, ENCFF643CGH 664892396 ENCODE Processing Pipeline ada4f8845b3e64771c49740ca232a28f https://www.encodeproject.org/files/ENCFF550RLX/@@download/ENCFF550RLX.bam GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF686NVV bam alignments ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 50 ENCFF643CGH, ENCFF769ICW 1199170132 ENCODE Processing Pipeline 123419aaa1fcd34c90a241bf9d8fcf7b https://www.encodeproject.org/files/ENCFF686NVV/@@download/ENCFF686NVV.bam GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF943IUG bigWig signal p-value ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF370PSF, ENCFF686NVV, ENCFF995OIG 978607038 ENCODE Processing Pipeline 3bb497e40ffd9bcd7ec085d282a79c77 https://www.encodeproject.org/files/ENCFF943IUG/@@download/ENCFF943IUG.bigWig GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF501KAM bigWig signal p-value ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF370PSF, ENCFF550RLX, ENCFF995OIG 854906800 ENCODE Processing Pipeline c7d0a386bfeb30cd056d691df5ea4e13 https://www.encodeproject.org/files/ENCFF501KAM/@@download/ENCFF501KAM.bigWig GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF198XEN bigWig signal p-value ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF370PSF, ENCFF550RLX, ENCFF686NVV, ENCFF995OIG 1035768807 ENCODE Processing Pipeline b36bbe074a9a3fd542d7620414f0a674 https://www.encodeproject.org/files/ENCFF198XEN/@@download/ENCFF198XEN.bigWig GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF545KFB bigWig fold change over control ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF370PSF, ENCFF550RLX, ENCFF995OIG 669480637 ENCODE Processing Pipeline 934383c15bf371aec33c0d65ee6411f6 https://www.encodeproject.org/files/ENCFF545KFB/@@download/ENCFF545KFB.bigWig GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF494UDV bigWig fold change over control ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF370PSF, ENCFF686NVV, ENCFF995OIG 847917337 ENCODE Processing Pipeline fdb51ee5717d66aa9c3d5f93b9d62e64 https://www.encodeproject.org/files/ENCFF494UDV/@@download/ENCFF494UDV.bigWig GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF152LUE bed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF370PSF, ENCFF550RLX, ENCFF995OIG 6323381 ENCODE Processing Pipeline 039700d75fa3551932b8724d8cd43c57 https://www.encodeproject.org/files/ENCFF152LUE/@@download/ENCFF152LUE.bed.gz GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF152OQL bigWig fold change over control ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF370PSF, ENCFF550RLX, ENCFF686NVV, ENCFF995OIG 1204182015 ENCODE Processing Pipeline e5d6f8e32490de44af31d3ff7b427180 https://www.encodeproject.org/files/ENCFF152OQL/@@download/ENCFF152OQL.bigWig GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF478PUG bed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF370PSF, ENCFF686NVV, ENCFF995OIG 6609895 ENCODE Processing Pipeline fba4bb0e56c56a5b4d973cc2d3bc8ce3 https://www.encodeproject.org/files/ENCFF478PUG/@@download/ENCFF478PUG.bed.gz GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF311ATO bigBed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1 ENCFF152LUE 13049515 ENCODE Processing Pipeline 788e812be3a9dd3eb7739ba925a933a0 https://www.encodeproject.org/files/ENCFF311ATO/@@download/ENCFF311ATO.bigBed GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF720EBM bed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF370PSF, ENCFF550RLX, ENCFF686NVV, ENCFF995OIG 6859158 ENCODE Processing Pipeline ca5dd8316748345e0dfa756a24117a3c https://www.encodeproject.org/files/ENCFF720EBM/@@download/ENCFF720EBM.bed.gz GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF838VFX bed narrowPeak optimal idr thresholded peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF152LUE, ENCFF419RSJ, ENCFF478PUG, ENCFF720EBM 542676 ENCODE Processing Pipeline 96df6fc0ed16c24d7af0c1b36bf582c1 https://www.encodeproject.org/files/ENCFF838VFX/@@download/ENCFF838VFX.bed.gz GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF787VLV bigBed narrowPeak optimal idr thresholded peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF838VFX 1035265 ENCODE Processing Pipeline fe9ae39c0909bfb0c988e152f703021c https://www.encodeproject.org/files/ENCFF787VLV/@@download/ENCFF787VLV.bigBed GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF092EHP bigBed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 2 ENCFF478PUG 13315153 ENCODE Processing Pipeline 76b1a3486c612df40cd74ad74f0f817d https://www.encodeproject.org/files/ENCFF092EHP/@@download/ENCFF092EHP.bigBed GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF284PPQ bigBed narrowPeak peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF720EBM 13196061 ENCODE Processing Pipeline 6b32247f9cf8aeb2a8e21458c1bd9ea7 https://www.encodeproject.org/files/ENCFF284PPQ/@@download/ENCFF284PPQ.bigBed GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF802JZI bigBed narrowPeak conservative idr thresholded peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF805MUO 1020683 ENCODE Processing Pipeline 12bbfb4c8ae5493f434915340eb33c99 https://www.encodeproject.org/files/ENCFF802JZI/@@download/ENCFF802JZI.bigBed GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF805MUO bed narrowPeak conservative idr thresholded peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF152LUE, ENCFF419RSJ, ENCFF478PUG, ENCFF720EBM 533979 ENCODE Processing Pipeline 462b6bc38b4a67bc559bb16c7ba57618 https://www.encodeproject.org/files/ENCFF805MUO/@@download/ENCFF805MUO.bed.gz GRCh38 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF454LWY bigBed narrowPeak conservative idr thresholded peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF089DNN 953050 ENCODE Processing Pipeline fe8c1f28bb40c4c177449ec5086cb353 https://www.encodeproject.org/files/ENCFF454LWY/@@download/ENCFF454LWY.bigBed hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF214QUX bed narrowPeak optimal idr thresholded peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF396QYK, ENCFF579AYO, ENCFF642PNJ 501080 ENCODE Processing Pipeline 7371981ddd260e640ca4863cbb1d94bd https://www.encodeproject.org/files/ENCFF214QUX/@@download/ENCFF214QUX.bed.gz hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF438BIL bigBed narrowPeak optimal idr thresholded peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF214QUX 976277 ENCODE Processing Pipeline f89053e6d25cad6f478e7c096fec2441 https://www.encodeproject.org/files/ENCFF438BIL/@@download/ENCFF438BIL.bigBed hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF089DNN bed narrowPeak conservative idr thresholded peaks ENCSR994YLZ ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens YY1-human ENCAB000ANT DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF396QYK, ENCFF579AYO, ENCFF642PNJ 484985 ENCODE Processing Pipeline 30fcce1f583fef4225344ba217fd98ed https://www.encodeproject.org/files/ENCFF089DNN/@@download/ENCFF089DNN.bed.gz hg19 released antibody characterized with exemption, low read depth biological replicates with identical biosample ENCFF000NCP bam alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NDA 1852463805 Richard Myers, HAIB 685cef18a808f8d5a9af539edd054387 https://www.encodeproject.org/files/ENCFF000NCP/@@download/ENCFF000NCP.bam hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NCQ bam alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NDD 1729457141 Richard Myers, HAIB ca09e59225e24d21e55bd9251e7ce8a6 https://www.encodeproject.org/files/ENCFF000NCQ/@@download/ENCFF000NCQ.bam hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NCR bigWig raw signal ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 35135314 Richard Myers, HAIB 33a2dda2c168eefbb8ab3cfc2f88dee1 https://www.encodeproject.org/files/ENCFF000NCR/@@download/ENCFF000NCR.bigWig hg19 released control low read depth, low read length, low read depth missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NCT bigWig raw signal ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 35440108 Richard Myers, HAIB d7cb06c48a98b82b88dac514ece6fe22 https://www.encodeproject.org/files/ENCFF000NCT/@@download/ENCFF000NCT.bigWig hg19 released control low read depth, low read length, low read depth missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NDA fastq reads ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1227738010 Richard Myers, HAIB 738672594ec55ce52316c8ce523491a1 https://www.encodeproject.org/files/ENCFF000NDA/@@download/ENCFF000NDA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGC/ released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NDD fastq reads ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1515872249 Richard Myers, HAIB ea5bffd4ab2f3c719c28a3b8786d871e https://www.encodeproject.org/files/ENCFF000NDD/@@download/ENCFF000NDD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGC/ released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF244PWP bam unfiltered alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NDD, ENCFF807MUK 1800259238 ENCODE Processing Pipeline 67c6baa64b5ea87030cd3957a67e292a https://www.encodeproject.org/files/ENCFF244PWP/@@download/ENCFF244PWP.bam hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF420KGI bam unfiltered alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NDA, ENCFF643CGH 1460184255 ENCODE Processing Pipeline 4eeb9a4a17babefbbb35107502eecd89 https://www.encodeproject.org/files/ENCFF420KGI/@@download/ENCFF420KGI.bam GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF717HZW bam alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NDA, ENCFF643CGH 360259329 ENCODE Processing Pipeline 0c6aeebcc154aae304d24aa9da6074dc https://www.encodeproject.org/files/ENCFF717HZW/@@download/ENCFF717HZW.bam GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF614XTC bam unfiltered alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NDD, ENCFF643CGH 1803336805 ENCODE Processing Pipeline 6bd5aa88f8e256a876f2a5987261b9be https://www.encodeproject.org/files/ENCFF614XTC/@@download/ENCFF614XTC.bam GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF901AZD bam alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NDD, ENCFF807MUK 437951298 ENCODE Processing Pipeline 2189b3ba5e65fee45fe438b32afa4fc3 https://www.encodeproject.org/files/ENCFF901AZD/@@download/ENCFF901AZD.bam hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF122SVL bam unfiltered alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NDA, ENCFF807MUK 1457368787 ENCODE Processing Pipeline b019fce1fe4a2cd299d69393a1bc7e61 https://www.encodeproject.org/files/ENCFF122SVL/@@download/ENCFF122SVL.bam hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF105WJU bam alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NDD, ENCFF643CGH 437869432 ENCODE Processing Pipeline 56f3a0d30ebd4c9d8e7504ea6fe50187 https://www.encodeproject.org/files/ENCFF105WJU/@@download/ENCFF105WJU.bam GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF579FIX bam alignments ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NDA, ENCFF807MUK 360598553 ENCODE Processing Pipeline 20f0ee2c209bce27f929b24872838a7b https://www.encodeproject.org/files/ENCFF579FIX/@@download/ENCFF579FIX.bam hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF108ULS bigWig signal p-value ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF579FIX, ENCFF686SSI 300677488 ENCODE Processing Pipeline ded2d08c22027f34caa7911ea668a5b9 https://www.encodeproject.org/files/ENCFF108ULS/@@download/ENCFF108ULS.bigWig hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF780TBX bigWig signal p-value ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF686SSI, ENCFF901AZD 351490063 ENCODE Processing Pipeline 53b4219e9bf86f1f8844d3ba60ea7210 https://www.encodeproject.org/files/ENCFF780TBX/@@download/ENCFF780TBX.bigWig hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF197KJU bigWig signal p-value ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF579FIX, ENCFF686SSI, ENCFF901AZD 328514041 ENCODE Processing Pipeline f6e6c074fa8111403dc251d8e29fdc81 https://www.encodeproject.org/files/ENCFF197KJU/@@download/ENCFF197KJU.bigWig hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF617SRR bigWig fold change over control ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF579FIX, ENCFF686SSI 154667569 ENCODE Processing Pipeline 2d6e1f69f5a2254c6af4e129be9fe5e4 https://www.encodeproject.org/files/ENCFF617SRR/@@download/ENCFF617SRR.bigWig hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF113FIS bigWig fold change over control ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF686SSI, ENCFF901AZD 194857600 ENCODE Processing Pipeline 9f9998dddc404e26f009950723bc538e https://www.encodeproject.org/files/ENCFF113FIS/@@download/ENCFF113FIS.bigWig hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF686KTR bigWig fold change over control ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF579FIX, ENCFF686SSI, ENCFF901AZD 319120560 ENCODE Processing Pipeline 1fbb91a3190d78c6269714c393431ef0 https://www.encodeproject.org/files/ENCFF686KTR/@@download/ENCFF686KTR.bigWig hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF718YNI bigBed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF810TPO 10350594 ENCODE Processing Pipeline 0689c5f18d05dee5aabb85cc37781064 https://www.encodeproject.org/files/ENCFF718YNI/@@download/ENCFF718YNI.bigBed hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF657TOE bigBed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF900AOD 12959778 ENCODE Processing Pipeline 61370721517663909cefc57e9c999000 https://www.encodeproject.org/files/ENCFF657TOE/@@download/ENCFF657TOE.bigBed hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF495YRW bed narrowPeak optimal idr thresholded peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF810TPO, ENCFF900AOD, ENCFF918SQN 187680 ENCODE Processing Pipeline da6ed4c9e0e8cd425a6062a294c924dd https://www.encodeproject.org/files/ENCFF495YRW/@@download/ENCFF495YRW.bed.gz hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF918SQN bed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF579FIX, ENCFF686SSI 4127101 ENCODE Processing Pipeline e703e83a6128f3b4ba73324c275be6e3 https://www.encodeproject.org/files/ENCFF918SQN/@@download/ENCFF918SQN.bed.gz hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF557CRT bigBed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF918SQN 9057385 ENCODE Processing Pipeline 3bfd5f50f3d359386c35c4e06a04b7f8 https://www.encodeproject.org/files/ENCFF557CRT/@@download/ENCFF557CRT.bigBed hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF191PXP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF748NLA 363266 ENCODE Processing Pipeline 34ab457ad89fb3fa4e7e29b6691a0e05 https://www.encodeproject.org/files/ENCFF191PXP/@@download/ENCFF191PXP.bigBed hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF569GGB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF495YRW 376359 ENCODE Processing Pipeline 2e7612125a8169dcd6be28293e5b2f56 https://www.encodeproject.org/files/ENCFF569GGB/@@download/ENCFF569GGB.bigBed hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF810TPO bed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF686SSI, ENCFF901AZD 4567282 ENCODE Processing Pipeline c5d01a2bb3ce1f1091977d749d7e3002 https://www.encodeproject.org/files/ENCFF810TPO/@@download/ENCFF810TPO.bed.gz hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF900AOD bed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF579FIX, ENCFF686SSI, ENCFF901AZD 5429853 ENCODE Processing Pipeline f475dea46b41a8d4bc6d593f4d09a50f https://www.encodeproject.org/files/ENCFF900AOD/@@download/ENCFF900AOD.bed.gz hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF748NLA bed narrowPeak conservative idr thresholded peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF810TPO, ENCFF900AOD, ENCFF918SQN 179235 ENCODE Processing Pipeline 8ee3643632a29351a9572d0cae6f21c4 https://www.encodeproject.org/files/ENCFF748NLA/@@download/ENCFF748NLA.bed.gz hg19 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF518MEV bigWig signal p-value ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105WJU, ENCFF291OFI, ENCFF717HZW 326763513 ENCODE Processing Pipeline 4348be021d13e9234678173f47f259ee https://www.encodeproject.org/files/ENCFF518MEV/@@download/ENCFF518MEV.bigWig GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF224MXA bigWig fold change over control ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF105WJU, ENCFF291OFI 194486425 ENCODE Processing Pipeline fe9da5c1bd07c7a0d8aac87f4a2ce9b0 https://www.encodeproject.org/files/ENCFF224MXA/@@download/ENCFF224MXA.bigWig GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF789DUG bigWig signal p-value ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF105WJU, ENCFF291OFI 273214748 ENCODE Processing Pipeline 0d6671fda49f11aecf7a09e3131319fa https://www.encodeproject.org/files/ENCFF789DUG/@@download/ENCFF789DUG.bigWig GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF080AGG bigWig signal p-value ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF291OFI, ENCFF717HZW 280478399 ENCODE Processing Pipeline 278e360723d1e270c05f66d4fce55bf3 https://www.encodeproject.org/files/ENCFF080AGG/@@download/ENCFF080AGG.bigWig GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF165HHT bigWig fold change over control ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF291OFI, ENCFF717HZW 154806967 ENCODE Processing Pipeline 7d6050161bc6e0e32c212e5b95de647b https://www.encodeproject.org/files/ENCFF165HHT/@@download/ENCFF165HHT.bigWig GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF463DJO bed narrowPeak optimal idr thresholded peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF272HTB, ENCFF419RSJ, ENCFF512HYZ, ENCFF817PTJ 183109 ENCODE Processing Pipeline 24b1326c1973cf122ea2086fdbd46674 https://www.encodeproject.org/files/ENCFF463DJO/@@download/ENCFF463DJO.bed.gz GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF525GZV bigWig fold change over control ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105WJU, ENCFF291OFI, ENCFF717HZW 315059173 ENCODE Processing Pipeline 0cd37144dcf6d0d912cc5d74ca237faf https://www.encodeproject.org/files/ENCFF525GZV/@@download/ENCFF525GZV.bigWig GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF512HYZ bed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF291OFI, ENCFF717HZW 3997813 ENCODE Processing Pipeline 457f80252e55cceb7facae279b3e4906 https://www.encodeproject.org/files/ENCFF512HYZ/@@download/ENCFF512HYZ.bed.gz GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF817PTJ bed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF105WJU, ENCFF291OFI 4419903 ENCODE Processing Pipeline e6c96478d719fe1b008b84f7bfa5d19c https://www.encodeproject.org/files/ENCFF817PTJ/@@download/ENCFF817PTJ.bed.gz GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF272HTB bed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF105WJU, ENCFF291OFI, ENCFF717HZW 5331216 ENCODE Processing Pipeline 17f173d8e0660fc3de817d89f29ecb16 https://www.encodeproject.org/files/ENCFF272HTB/@@download/ENCFF272HTB.bed.gz GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF035GCR bigBed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1 ENCFF512HYZ 8893538 ENCODE Processing Pipeline efe30334d8fe3b193470a2cb78e903b6 https://www.encodeproject.org/files/ENCFF035GCR/@@download/ENCFF035GCR.bigBed GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF894WQX bigBed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 2 ENCFF817PTJ 10162260 ENCODE Processing Pipeline ef9b95dd087c1c83c4a0a2b1a81f6416 https://www.encodeproject.org/files/ENCFF894WQX/@@download/ENCFF894WQX.bigBed GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF541WQF bigBed narrowPeak peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF272HTB 12931553 ENCODE Processing Pipeline 9cc0b43a607f4f6513b65af3d84e5bb6 https://www.encodeproject.org/files/ENCFF541WQF/@@download/ENCFF541WQF.bigBed GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF642VPT bed narrowPeak conservative idr thresholded peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF272HTB, ENCFF419RSJ, ENCFF512HYZ, ENCFF817PTJ 180683 ENCODE Processing Pipeline 6c5c46e986c7119df8c958f08b2756ec https://www.encodeproject.org/files/ENCFF642VPT/@@download/ENCFF642VPT.bed.gz GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF654LGC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF642VPT 367709 ENCODE Processing Pipeline 4f6c4fc5b3333fbb37b0f89b1e474730 https://www.encodeproject.org/files/ENCFF654LGC/@@download/ENCFF654LGC.bigBed GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF982WII bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol NR3C1-human ENCAB000AHB DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF463DJO 372246 ENCODE Processing Pipeline 5476feae24d08a449f49036942842f48 https://www.encodeproject.org/files/ENCFF982WII/@@download/ENCFF982WII.bigBed GRCh38 released control low read depth, low read length, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000MWO bam alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000MXC 1822518556 Richard Myers, HAIB c086b108a2796a33df5a19bae8be882f https://www.encodeproject.org/files/ENCFF000MWO/@@download/ENCFF000MWO.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MWP bigBed broadPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TRM 480313 Richard Myers, HAIB d4fd00b8220bb97fc8d3485999d7497c https://www.encodeproject.org/files/ENCFF000MWP/@@download/ENCFF000MWP.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MWQ bigBed broadPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TRN 501844 Richard Myers, HAIB 75785c6418a69fbf47312bf783294f20 https://www.encodeproject.org/files/ENCFF000MWQ/@@download/ENCFF000MWQ.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MWS bam alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000MXD 1909583392 Richard Myers, HAIB aa87c6f179244f41e9d8ad2629c1ebcb https://www.encodeproject.org/files/ENCFF000MWS/@@download/ENCFF000MWS.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MWT bigWig raw signal ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 1 18184290 Richard Myers, HAIB d8885d156304ed9145d23089f48303b9 https://www.encodeproject.org/files/ENCFF000MWT/@@download/ENCFF000MWT.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000MWU bigWig raw signal ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 1 17087565 Richard Myers, HAIB 25821c3c4d51a44d8e8989f251a2a846 https://www.encodeproject.org/files/ENCFF000MWU/@@download/ENCFF000MWU.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000MXC fastq reads ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1880626761 Richard Myers, HAIB 1dd8d2c1e84ee0ea458b6bb8c4f0f259 https://www.encodeproject.org/files/ENCFF000MXC/@@download/ENCFF000MXC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MXD fastq reads ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1879228193 Richard Myers, HAIB bd2a0e44be0d2a2c68f7287a384915b5 https://www.encodeproject.org/files/ENCFF000MXD/@@download/ENCFF000MXD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TRM bed broadPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 1 229177 Richard Myers, HAIB 45f9bfead1110a47336c763713859fd3 https://www.encodeproject.org/files/ENCFF001TRM/@@download/ENCFF001TRM.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TRN bed broadPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 1 240437 Richard Myers, HAIB 196865102c9602729f763c5c4e7fcd78 https://www.encodeproject.org/files/ENCFF001TRN/@@download/ENCFF001TRN.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CFH bed narrowPeak optimal idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 179680 ENCODE Consortium Analysis Working Group 438a33fdd8f029710327b3d6f6dbbce3 https://www.encodeproject.org/files/ENCFF002CFH/@@download/ENCFF002CFH.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF029AVM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE ENCFF002CFH 480324 ENCODE Consortium 83b6690b44e13d1da71b5bb4b5d4809f https://www.encodeproject.org/files/ENCFF029AVM/@@download/ENCFF029AVM.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF319BCR bam unfiltered alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MXC, ENCFF643CGH 2025035791 ENCODE Processing Pipeline f6cd4a616b3033d2e0f7873f8f8750d7 https://www.encodeproject.org/files/ENCFF319BCR/@@download/ENCFF319BCR.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF017BBF bam alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MXC, ENCFF643CGH 908847027 ENCODE Processing Pipeline c23de2cc86d37568e278ec7afdb990e8 https://www.encodeproject.org/files/ENCFF017BBF/@@download/ENCFF017BBF.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF711JRX bam unfiltered alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MXD, ENCFF643CGH 2096363772 ENCODE Processing Pipeline 70f87fca56c3339bacb1b4951c10733d https://www.encodeproject.org/files/ENCFF711JRX/@@download/ENCFF711JRX.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF421BVL bam alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MXD, ENCFF643CGH 1345029083 ENCODE Processing Pipeline 30b2e880440c83f4d9d17f10c085d9d8 https://www.encodeproject.org/files/ENCFF421BVL/@@download/ENCFF421BVL.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF403RBH bam unfiltered alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MXC, ENCFF807MUK 2019571337 ENCODE Processing Pipeline 05f8714d46abaafd138999253537da15 https://www.encodeproject.org/files/ENCFF403RBH/@@download/ENCFF403RBH.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF788NMA bam alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MXC, ENCFF807MUK 909112611 ENCODE Processing Pipeline 0b1c58d7c594b6d6dbddf3fcaaf1fb1d https://www.encodeproject.org/files/ENCFF788NMA/@@download/ENCFF788NMA.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF280CLV bam unfiltered alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MXD, ENCFF807MUK 2089833943 ENCODE Processing Pipeline de26d3bae7ecefd587124cd882a8c660 https://www.encodeproject.org/files/ENCFF280CLV/@@download/ENCFF280CLV.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF678LJA bam alignments ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MXD, ENCFF807MUK 1345084783 ENCODE Processing Pipeline 7badc1dae2189d419a9eb427967f357c https://www.encodeproject.org/files/ENCFF678LJA/@@download/ENCFF678LJA.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF003SCT bigWig signal p-value ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF017BBF, ENCFF656HEF 524876711 ENCODE Processing Pipeline 176938567753aca017abf41c14f51156 https://www.encodeproject.org/files/ENCFF003SCT/@@download/ENCFF003SCT.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF353CUO bigWig signal p-value ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421BVL, ENCFF656HEF 624915291 ENCODE Processing Pipeline d00a4779c05c0726d6b21bda9e1a3594 https://www.encodeproject.org/files/ENCFF353CUO/@@download/ENCFF353CUO.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF088WBW bigWig signal p-value ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF017BBF, ENCFF421BVL, ENCFF656HEF 846616867 ENCODE Processing Pipeline 062631c4db23b59c22aafdb0bdf40787 https://www.encodeproject.org/files/ENCFF088WBW/@@download/ENCFF088WBW.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF806FIS bigWig fold change over control ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF017BBF, ENCFF656HEF 471483795 ENCODE Processing Pipeline c0227fd4dcf64633eed5edb0d7e7d8f7 https://www.encodeproject.org/files/ENCFF806FIS/@@download/ENCFF806FIS.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF995VXD bed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421BVL, ENCFF656HEF 6715064 ENCODE Processing Pipeline c1c2ecd721929a26e209ba1b63948cf8 https://www.encodeproject.org/files/ENCFF995VXD/@@download/ENCFF995VXD.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF450XFK bigWig fold change over control ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF421BVL, ENCFF656HEF 662534056 ENCODE Processing Pipeline 9cd12a88f5e71a782faecf13ae86158f https://www.encodeproject.org/files/ENCFF450XFK/@@download/ENCFF450XFK.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF501GGX bigBed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF815TAP 12702297 ENCODE Processing Pipeline 5cfe6bf7f6c00221ddab19aaf4c1cd4d https://www.encodeproject.org/files/ENCFF501GGX/@@download/ENCFF501GGX.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF371RCS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF093ZAB 474821 ENCODE Processing Pipeline e8aaca3e01a8787366106180926f81ad https://www.encodeproject.org/files/ENCFF371RCS/@@download/ENCFF371RCS.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF517WBB bigWig fold change over control ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF017BBF, ENCFF421BVL, ENCFF656HEF 884235325 ENCODE Processing Pipeline d3dc4ee66d3dff2a35c6b7f35ea5ce73 https://www.encodeproject.org/files/ENCFF517WBB/@@download/ENCFF517WBB.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF786YDD bed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF017BBF, ENCFF656HEF 6335167 ENCODE Processing Pipeline a55acb44f9074673c848a3e2f74b000c https://www.encodeproject.org/files/ENCFF786YDD/@@download/ENCFF786YDD.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF815TAP bed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF017BBF, ENCFF421BVL, ENCFF656HEF 7047726 ENCODE Processing Pipeline c0dbb5081e65cb21c9c631ca146ffa7d https://www.encodeproject.org/files/ENCFF815TAP/@@download/ENCFF815TAP.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF492KDZ bigBed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF786YDD 12793781 ENCODE Processing Pipeline 9fec8876265f9bac7f0ed99b52fb86b6 https://www.encodeproject.org/files/ENCFF492KDZ/@@download/ENCFF492KDZ.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF709IOM bigBed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF995VXD 12862332 ENCODE Processing Pipeline 04e5d84d9f39bed9dce3207200fdd572 https://www.encodeproject.org/files/ENCFF709IOM/@@download/ENCFF709IOM.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF200RTY bed narrowPeak conservative idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF786YDD, ENCFF815TAP, ENCFF995VXD 165721 ENCODE Processing Pipeline 8777c0fa5f8ee1fe966d65343c58e352 https://www.encodeproject.org/files/ENCFF200RTY/@@download/ENCFF200RTY.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF281OWN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF200RTY 395323 ENCODE Processing Pipeline 9c5551dbe4f3e028b2b739af141e54be https://www.encodeproject.org/files/ENCFF281OWN/@@download/ENCFF281OWN.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF093ZAB bed narrowPeak optimal idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF786YDD, ENCFF815TAP, ENCFF995VXD 214919 ENCODE Processing Pipeline 7d6369343b30fcbc6eaf2c9182ce8b2d https://www.encodeproject.org/files/ENCFF093ZAB/@@download/ENCFF093ZAB.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF406XRG bigWig signal p-value ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF788NMA, ENCFF864UEQ 545155322 ENCODE Processing Pipeline 5c76aec9fcc6cbb6b0eef57154096fd0 https://www.encodeproject.org/files/ENCFF406XRG/@@download/ENCFF406XRG.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF324XZL bigWig fold change over control ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF788NMA, ENCFF864UEQ 458235376 ENCODE Processing Pipeline d3f2386a65a8d51ecaa7fb2157afea3d https://www.encodeproject.org/files/ENCFF324XZL/@@download/ENCFF324XZL.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF223SYH bigWig signal p-value ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF678LJA, ENCFF864UEQ 681189786 ENCODE Processing Pipeline 003122314e4ef7a17745018cf740fc99 https://www.encodeproject.org/files/ENCFF223SYH/@@download/ENCFF223SYH.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF036VOJ bigWig signal p-value ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF678LJA, ENCFF788NMA, ENCFF864UEQ 847412103 ENCODE Processing Pipeline 66497e444d66c8cbb4f65b5dcfcbccdf https://www.encodeproject.org/files/ENCFF036VOJ/@@download/ENCFF036VOJ.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF350JOB bigBed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF395ZTW 12866635 ENCODE Processing Pipeline fbfad289c33f7f42f657cfad51daeb7b https://www.encodeproject.org/files/ENCFF350JOB/@@download/ENCFF350JOB.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF887FHV bigWig fold change over control ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF678LJA, ENCFF864UEQ 644451106 ENCODE Processing Pipeline 6854e791a394674080c8ea837c5a989e https://www.encodeproject.org/files/ENCFF887FHV/@@download/ENCFF887FHV.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF518ERS bigWig fold change over control ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF678LJA, ENCFF788NMA, ENCFF864UEQ 896416915 ENCODE Processing Pipeline 45dd5c0ee222b4b6f1bc8683826dbca6 https://www.encodeproject.org/files/ENCFF518ERS/@@download/ENCFF518ERS.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF464UMR bed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF788NMA, ENCFF864UEQ 6366838 ENCODE Processing Pipeline e2926302ad89a29921a7102fffba1dbb https://www.encodeproject.org/files/ENCFF464UMR/@@download/ENCFF464UMR.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF325WAV bed narrowPeak optimal idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF395ZTW, ENCFF464UMR, ENCFF746BWA 232452 ENCODE Processing Pipeline 0842e3bc3cde1110bda1860a4a18a8fc https://www.encodeproject.org/files/ENCFF325WAV/@@download/ENCFF325WAV.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF450XJQ bigBed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1 ENCFF464UMR 12826593 ENCODE Processing Pipeline ae631a16533233475eb90a8f681215f1 https://www.encodeproject.org/files/ENCFF450XJQ/@@download/ENCFF450XJQ.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF395ZTW bed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 2 ENCFF678LJA, ENCFF864UEQ 6719388 ENCODE Processing Pipeline 6df4ca160476c7e68c96fafea8f491de https://www.encodeproject.org/files/ENCFF395ZTW/@@download/ENCFF395ZTW.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF653IFC bigBed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF746BWA 12696676 ENCODE Processing Pipeline ce353a12c17d23fde19a1094138b42bf https://www.encodeproject.org/files/ENCFF653IFC/@@download/ENCFF653IFC.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF746BWA bed narrowPeak peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF678LJA, ENCFF788NMA, ENCFF864UEQ 7055626 ENCODE Processing Pipeline 8188f949ae6f97c23b4cd38ee933eadc https://www.encodeproject.org/files/ENCFF746BWA/@@download/ENCFF746BWA.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF892MGU bed narrowPeak conservative idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF395ZTW, ENCFF464UMR, ENCFF746BWA 164821 ENCODE Processing Pipeline 79f403f58d326e5390343fecaf36e6d1 https://www.encodeproject.org/files/ENCFF892MGU/@@download/ENCFF892MGU.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF091YQS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF892MGU 392392 ENCODE Processing Pipeline 2fd882469f8a3c6d3196c0d31a773278 https://www.encodeproject.org/files/ENCFF091YQS/@@download/ENCFF091YQS.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF772WAR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQH ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol BCL3-human ENCAB000AEG DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF325WAV 500950 ENCODE Processing Pipeline 527a89d75cdf70b433cfe32036f39695 https://www.encodeproject.org/files/ENCFF772WAR/@@download/ENCFF772WAR.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000PFU bam alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PGG 677613913 Richard Myers, HAIB 492bfe381752db645bacffb9206791dd https://www.encodeproject.org/files/ENCFF000PFU/@@download/ENCFF000PFU.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000PFV bigBed broadPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UFI 303442 Richard Myers, HAIB 7b66255d6d004c43e5d74d16d92731ee https://www.encodeproject.org/files/ENCFF000PFV/@@download/ENCFF000PFV.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000PFW bigBed broadPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UFJ 560963 Richard Myers, HAIB 0c993d4cdc5c8b9f265d8da7cad9d683 https://www.encodeproject.org/files/ENCFF000PFW/@@download/ENCFF000PFW.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000PFX bam alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PGI 891616654 Richard Myers, HAIB 290a4aa688bf8d10e159bf9ed4a8e187 https://www.encodeproject.org/files/ENCFF000PFX/@@download/ENCFF000PFX.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000PFZ bigWig raw signal ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 6098714 Richard Myers, HAIB 40c4310f88792ce5df383defb71ff216 https://www.encodeproject.org/files/ENCFF000PFZ/@@download/ENCFF000PFZ.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000PGA bigWig raw signal ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 22073590 Richard Myers, HAIB 99bff1e6a6d3d8fd340a44ef6ca7d4db https://www.encodeproject.org/files/ENCFF000PGA/@@download/ENCFF000PGA.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000PGG fastq reads ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 631728218 Richard Myers, HAIB 2f9e7f8988345792a93889c0dd97b87f https://www.encodeproject.org/files/ENCFF000PGG/@@download/ENCFF000PGG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF000PGI fastq reads ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 997118673 Richard Myers, HAIB 80ebd982793ad5d02852b9ab680a4dc6 https://www.encodeproject.org/files/ENCFF000PGI/@@download/ENCFF000PGI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF001UFI bed broadPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 180311 Richard Myers, HAIB 0ff1176513b0976710aafd7e425cad70 https://www.encodeproject.org/files/ENCFF001UFI/@@download/ENCFF001UFI.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF001UFJ bed broadPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 367742 Richard Myers, HAIB d2a9aa75a8bde42d2347c1fb06143473 https://www.encodeproject.org/files/ENCFF001UFJ/@@download/ENCFF001UFJ.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF002CKD bed narrowPeak optimal idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 351541 ENCODE Consortium Analysis Working Group e5c7bb9a3ee8ae83426bb3a49cfd9370 https://www.encodeproject.org/files/ENCFF002CKD/@@download/ENCFF002CKD.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF974PGS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE ENCFF002CKD 697076 ENCODE Consortium 9710272e7010e81dea4fa411a4a29f95 https://www.encodeproject.org/files/ENCFF974PGS/@@download/ENCFF974PGS.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF090KCF bam alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PGG, ENCFF643CGH 485444606 ENCODE Processing Pipeline 14ceb896698acb080ae68657fb9ccf7d https://www.encodeproject.org/files/ENCFF090KCF/@@download/ENCFF090KCF.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF906TKS bam unfiltered alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PGG, ENCFF643CGH 803084288 ENCODE Processing Pipeline 512cdc6b9a06fc7668c9858bb290009b https://www.encodeproject.org/files/ENCFF906TKS/@@download/ENCFF906TKS.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF499BWX bam alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PGI, ENCFF643CGH 370360688 ENCODE Processing Pipeline 4ab2f03fdc22038436427caf2d233175 https://www.encodeproject.org/files/ENCFF499BWX/@@download/ENCFF499BWX.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF404WAE bam unfiltered alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PGI, ENCFF643CGH 1104267234 ENCODE Processing Pipeline 9c98b26946f74e304e3685bbdfe337e5 https://www.encodeproject.org/files/ENCFF404WAE/@@download/ENCFF404WAE.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF876HLQ bam unfiltered alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PGI, ENCFF807MUK 1101856384 ENCODE Processing Pipeline f8d0ab60e3782a29c119f48a6ca57bd3 https://www.encodeproject.org/files/ENCFF876HLQ/@@download/ENCFF876HLQ.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF659YOC bam alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PGI, ENCFF807MUK 370569309 ENCODE Processing Pipeline 3b27311eeefb188f5d11ff47973f0140 https://www.encodeproject.org/files/ENCFF659YOC/@@download/ENCFF659YOC.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF275GCD bam alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PGG, ENCFF807MUK 485691004 ENCODE Processing Pipeline dabfb694f12ae1a1f7a7e232041ccca4 https://www.encodeproject.org/files/ENCFF275GCD/@@download/ENCFF275GCD.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF549UFG bam unfiltered alignments ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PGG, ENCFF807MUK 800699255 ENCODE Processing Pipeline a50874f827457597eb51a4dcafa6da44 https://www.encodeproject.org/files/ENCFF549UFG/@@download/ENCFF549UFG.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF750GHL bigWig fold change over control ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF499BWX 201255714 ENCODE Processing Pipeline e1dfa50c59c019fcab3946d7005452a5 https://www.encodeproject.org/files/ENCFF750GHL/@@download/ENCFF750GHL.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF679MVX bed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF090KCF, ENCFF175NMQ, ENCFF499BWX 4806269 ENCODE Processing Pipeline 94fa61f1a48fec295492dda866c8bbde https://www.encodeproject.org/files/ENCFF679MVX/@@download/ENCFF679MVX.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF362ZFR bigBed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF461ZHK 8131025 ENCODE Processing Pipeline 4af01217a366ed09d65e78c679a70e46 https://www.encodeproject.org/files/ENCFF362ZFR/@@download/ENCFF362ZFR.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF821SPQ bigWig signal p-value ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF499BWX 418885197 ENCODE Processing Pipeline f1bc4e0125db93ee41670df865b1237b https://www.encodeproject.org/files/ENCFF821SPQ/@@download/ENCFF821SPQ.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF461ZHK bed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF175NMQ, ENCFF499BWX 3920797 ENCODE Processing Pipeline 2c96fbb11de056d69474a0d70497af7d https://www.encodeproject.org/files/ENCFF461ZHK/@@download/ENCFF461ZHK.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF170QIU bigWig signal p-value ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF090KCF, ENCFF175NMQ 389424394 ENCODE Processing Pipeline 0ff6acb3a13058a92f7036e52764e60f https://www.encodeproject.org/files/ENCFF170QIU/@@download/ENCFF170QIU.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF557BWM bed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF090KCF, ENCFF175NMQ 4239907 ENCODE Processing Pipeline 80c49495017eecab9e3ff612762267b4 https://www.encodeproject.org/files/ENCFF557BWM/@@download/ENCFF557BWM.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF413QTU bigBed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF679MVX 10920861 ENCODE Processing Pipeline 95ccd01c96b2faaea3a9cd204972b0b8 https://www.encodeproject.org/files/ENCFF413QTU/@@download/ENCFF413QTU.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF709SLI bigWig signal p-value ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF090KCF, ENCFF175NMQ, ENCFF499BWX 485318883 ENCODE Processing Pipeline 6a2b7a6e1a92ebd7792179516be3f982 https://www.encodeproject.org/files/ENCFF709SLI/@@download/ENCFF709SLI.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF890ELX bigWig fold change over control ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF090KCF, ENCFF175NMQ 285678721 ENCODE Processing Pipeline 7ede8209dbc2c82771672b478bd71fd6 https://www.encodeproject.org/files/ENCFF890ELX/@@download/ENCFF890ELX.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF003HJB bigWig fold change over control ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF090KCF, ENCFF175NMQ, ENCFF499BWX 427387543 ENCODE Processing Pipeline 722ea89fd945a1c539305779eda303b2 https://www.encodeproject.org/files/ENCFF003HJB/@@download/ENCFF003HJB.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF711SIO bigBed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF557BWM 10263352 ENCODE Processing Pipeline e831b7dd52a8caf30f21d58beeb76a10 https://www.encodeproject.org/files/ENCFF711SIO/@@download/ENCFF711SIO.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF017OFK bed narrowPeak conservative idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF461ZHK, ENCFF557BWM, ENCFF679MVX 265678 ENCODE Processing Pipeline a54712da8fb0d4f27a9146ad0ee7879c https://www.encodeproject.org/files/ENCFF017OFK/@@download/ENCFF017OFK.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF598GAE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF017OFK 449340 ENCODE Processing Pipeline c125053878e83300f8daac0a40ad63a6 https://www.encodeproject.org/files/ENCFF598GAE/@@download/ENCFF598GAE.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF862DXR bed narrowPeak optimal idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF461ZHK, ENCFF557BWM, ENCFF679MVX 315294 ENCODE Processing Pipeline 507d02f39142e0696c56fbf3ac367c9d https://www.encodeproject.org/files/ENCFF862DXR/@@download/ENCFF862DXR.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF639LWO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF862DXR 511076 ENCODE Processing Pipeline 34c9355b2152f6ba50645f5cce0c6827 https://www.encodeproject.org/files/ENCFF639LWO/@@download/ENCFF639LWO.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF597BQB bigWig signal p-value ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF275GCD, ENCFF382BNF 403827336 ENCODE Processing Pipeline 72efd31507c08d2b18f959317f0f6b2c https://www.encodeproject.org/files/ENCFF597BQB/@@download/ENCFF597BQB.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF321NDM bigWig fold change over control ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF275GCD, ENCFF382BNF 283354390 ENCODE Processing Pipeline 10e0cb9838c309434eef80344d55a79a https://www.encodeproject.org/files/ENCFF321NDM/@@download/ENCFF321NDM.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF070ALX bigWig signal p-value ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF382BNF, ENCFF659YOC 483172976 ENCODE Processing Pipeline ba97cb6fdf04ce753046b01e9c92d953 https://www.encodeproject.org/files/ENCFF070ALX/@@download/ENCFF070ALX.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF264HJM bigWig signal p-value ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF275GCD, ENCFF382BNF, ENCFF659YOC 501039474 ENCODE Processing Pipeline 35eb3836fa436d8e36492e5a2e7bef15 https://www.encodeproject.org/files/ENCFF264HJM/@@download/ENCFF264HJM.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF822MIO bigWig fold change over control ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF382BNF, ENCFF659YOC 202012658 ENCODE Processing Pipeline 48e89caf3dfc672a11ca411cff4b2e51 https://www.encodeproject.org/files/ENCFF822MIO/@@download/ENCFF822MIO.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF793ZQV bigWig fold change over control ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF275GCD, ENCFF382BNF, ENCFF659YOC 424131103 ENCODE Processing Pipeline dfe92317052058316d80c8b209881a54 https://www.encodeproject.org/files/ENCFF793ZQV/@@download/ENCFF793ZQV.bigWig hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF721KHE bed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF275GCD, ENCFF382BNF 4408936 ENCODE Processing Pipeline c2ba84a109452733974208070d5e112d https://www.encodeproject.org/files/ENCFF721KHE/@@download/ENCFF721KHE.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF073ACH bed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF382BNF, ENCFF659YOC 3922214 ENCODE Processing Pipeline 2b9a98a9a0cbf2ae45dce3d7570c0950 https://www.encodeproject.org/files/ENCFF073ACH/@@download/ENCFF073ACH.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF774DWR bed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF275GCD, ENCFF382BNF, ENCFF659YOC 4807459 ENCODE Processing Pipeline e69a3432253c597451125b66b80e3b77 https://www.encodeproject.org/files/ENCFF774DWR/@@download/ENCFF774DWR.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF271FDL bigBed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF774DWR 10924476 ENCODE Processing Pipeline 877c88bb13299ba2b0bf26167b7203ef https://www.encodeproject.org/files/ENCFF271FDL/@@download/ENCFF271FDL.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF259ZMC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF855DWX 446170 ENCODE Processing Pipeline 21d61c856550e7756d2060236f0f6262 https://www.encodeproject.org/files/ENCFF259ZMC/@@download/ENCFF259ZMC.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF464XRK bigBed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF721KHE 10487774 ENCODE Processing Pipeline d1837e8e53fdf1da3cdacc6944420f88 https://www.encodeproject.org/files/ENCFF464XRK/@@download/ENCFF464XRK.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF247ZVI bigBed narrowPeak peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF073ACH 8126263 ENCODE Processing Pipeline a3dc9e64042a0b8695ab06186d351fe6 https://www.encodeproject.org/files/ENCFF247ZVI/@@download/ENCFF247ZVI.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF855DWX bed narrowPeak conservative idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF073ACH, ENCFF721KHE, ENCFF774DWR 263138 ENCODE Processing Pipeline ada5327e89a45a93f51fa5200eecc5ed https://www.encodeproject.org/files/ENCFF855DWX/@@download/ENCFF855DWX.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF471HCD bed narrowPeak optimal idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF073ACH, ENCFF721KHE, ENCFF774DWR 315269 ENCODE Processing Pipeline 9811f9d239aa6af3db6a129dcb21b892 https://www.encodeproject.org/files/ENCFF471HCD/@@download/ENCFF471HCD.bed.gz hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF236ZUZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF471HCD 510035 ENCODE Processing Pipeline 72d9f5a9258b63d87cbb477e7905a647 https://www.encodeproject.org/files/ENCFF236ZUZ/@@download/ENCFF236ZUZ.bigBed hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample severe bottlenecking, insufficient read depth ENCFF659AFH fastq reads ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 1 50 single-ended 1236300066 Richard Myers, HAIB 6b6ffbbd60215218e67f36ebd3320e02 SRA:SRR5331494 https://www.encodeproject.org/files/ENCFF659AFH/@@download/ENCFF659AFH.fastq.gz HiSeq 2000 /files/ENCFF225JIA/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF944THM fastq reads ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 1 50 single-ended 1914905820 Richard Myers, HAIB 0aea4de91701152b5612ececdb21ff2b SRA:SRR5331493 https://www.encodeproject.org/files/ENCFF944THM/@@download/ENCFF944THM.fastq.gz HiSeq 2000 /files/ENCFF002BGA/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF840IOC bam alignments ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 50 ENCFF659AFH, ENCFF807MUK 865886259 ENCODE Processing Pipeline 4b9f7e56fcb62f62d34227f61dc7e817 https://www.encodeproject.org/files/ENCFF840IOC/@@download/ENCFF840IOC.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF572PHE bam alignments ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 50 ENCFF807MUK, ENCFF944THM 1455091884 ENCODE Processing Pipeline cb15bb9a0d9dc3c0fda8b4df1b963217 https://www.encodeproject.org/files/ENCFF572PHE/@@download/ENCFF572PHE.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF672GCG bigWig signal p-value ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF223KCT, ENCFF572PHE, ENCFF840IOC, ENCFF927EKA 924037309 ENCODE Processing Pipeline 834d1af59d0b27ee1bdfefe724a09630 https://www.encodeproject.org/files/ENCFF672GCG/@@download/ENCFF672GCG.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF140GHI bigWig signal p-value ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 ENCFF840IOC, ENCFF927EKA 421241567 ENCODE Processing Pipeline c8f617aa90fe8a66e063cbd74e417ddc https://www.encodeproject.org/files/ENCFF140GHI/@@download/ENCFF140GHI.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF912SRD bigWig fold change over control ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 ENCFF223KCT, ENCFF572PHE 568431004 ENCODE Processing Pipeline b6a249187474b615d72b556881e9631b https://www.encodeproject.org/files/ENCFF912SRD/@@download/ENCFF912SRD.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF311FRR bigWig signal p-value ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 ENCFF223KCT, ENCFF572PHE 606433388 ENCODE Processing Pipeline f0c6afc8390667d8bb9e06c3275b80e9 https://www.encodeproject.org/files/ENCFF311FRR/@@download/ENCFF311FRR.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF413GIF bed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 ENCFF223KCT, ENCFF572PHE 5883774 ENCODE Processing Pipeline 9c5b278573a71d45d07c399a054649bb https://www.encodeproject.org/files/ENCFF413GIF/@@download/ENCFF413GIF.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF794YQY bed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 ENCFF840IOC, ENCFF927EKA 5902503 ENCODE Processing Pipeline 27f17640ac9d66f593f212a03fe30789 https://www.encodeproject.org/files/ENCFF794YQY/@@download/ENCFF794YQY.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF553HHF bed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF223KCT, ENCFF572PHE, ENCFF840IOC, ENCFF927EKA 6948814 ENCODE Processing Pipeline 7c4993ce9212ce866e20b999922e32fa https://www.encodeproject.org/files/ENCFF553HHF/@@download/ENCFF553HHF.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF501CXC bigBed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 ENCFF413GIF 13440807 ENCODE Processing Pipeline 1f2e76ff5e41c070bc48e3400d29264b https://www.encodeproject.org/files/ENCFF501CXC/@@download/ENCFF501CXC.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF824RKL bigWig fold change over control ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 ENCFF840IOC, ENCFF927EKA 353063159 ENCODE Processing Pipeline 0895f56903ed84dcd5272cc4e57ad829 https://www.encodeproject.org/files/ENCFF824RKL/@@download/ENCFF824RKL.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF865SUF bigWig fold change over control ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF223KCT, ENCFF572PHE, ENCFF840IOC, ENCFF927EKA 1020518546 ENCODE Processing Pipeline 06da1aa2a5f52a9a7b2a76f4ade81b4f https://www.encodeproject.org/files/ENCFF865SUF/@@download/ENCFF865SUF.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF356PQJ bigBed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 ENCFF794YQY 13046742 ENCODE Processing Pipeline 2979f681e523cc4202498ec54cb1ed56 https://www.encodeproject.org/files/ENCFF356PQJ/@@download/ENCFF356PQJ.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF601ECA bigBed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF553HHF 13237132 ENCODE Processing Pipeline eaf6053b7053266bdf54628e41bef921 https://www.encodeproject.org/files/ENCFF601ECA/@@download/ENCFF601ECA.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF132CNC bam unfiltered alignments ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 50 ENCFF643CGH, ENCFF659AFH 1293921659 ENCODE Processing Pipeline 3d746d6bfeee228ba5d889d2c5d584bf https://www.encodeproject.org/files/ENCFF132CNC/@@download/ENCFF132CNC.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF117EYR bam unfiltered alignments ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 50 ENCFF643CGH, ENCFF944THM 2017606843 ENCODE Processing Pipeline 07ea84fa11f4a4be792dfccda5176b13 https://www.encodeproject.org/files/ENCFF117EYR/@@download/ENCFF117EYR.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF346SPJ bam alignments ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 50 ENCFF643CGH, ENCFF659AFH 870473063 ENCODE Processing Pipeline 41e9f739b18ca49736b7443a57fb5fb5 https://www.encodeproject.org/files/ENCFF346SPJ/@@download/ENCFF346SPJ.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF386SPJ bam alignments ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 50 ENCFF643CGH, ENCFF944THM 1463075215 ENCODE Processing Pipeline 0cd3fe133f7e2556bc6510b83a90491c https://www.encodeproject.org/files/ENCFF386SPJ/@@download/ENCFF386SPJ.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF983DDH bigWig signal p-value ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 ENCFF183AOM, ENCFF346SPJ 435452252 ENCODE Processing Pipeline a883dd552e356bfa09e4ff0a1220acf5 https://www.encodeproject.org/files/ENCFF983DDH/@@download/ENCFF983DDH.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF224PHC bigWig signal p-value ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF183AOM, ENCFF346SPJ, ENCFF386SPJ, ENCFF747NOF 1004074289 ENCODE Processing Pipeline 8e06fa53e69449cbf2e6d101cf13246c https://www.encodeproject.org/files/ENCFF224PHC/@@download/ENCFF224PHC.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF867OZW bigWig signal p-value ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 ENCFF386SPJ, ENCFF747NOF 567455313 ENCODE Processing Pipeline 3c2c7b0082d1dbf597124e87e8e44df9 https://www.encodeproject.org/files/ENCFF867OZW/@@download/ENCFF867OZW.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF398VAT bigWig fold change over control ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 ENCFF183AOM, ENCFF346SPJ 365788161 ENCODE Processing Pipeline cfa4aa51bf5f08d9b7cbc17b2a543aa9 https://www.encodeproject.org/files/ENCFF398VAT/@@download/ENCFF398VAT.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF909VUX bigWig fold change over control ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 ENCFF386SPJ, ENCFF747NOF 541750733 ENCODE Processing Pipeline 0c3151b8e9da4bf7571c6afcdf963963 https://www.encodeproject.org/files/ENCFF909VUX/@@download/ENCFF909VUX.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF562GJY bigWig fold change over control ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF183AOM, ENCFF346SPJ, ENCFF386SPJ, ENCFF747NOF 971760948 ENCODE Processing Pipeline af7a9a89bdbf8714ca798686539008c0 https://www.encodeproject.org/files/ENCFF562GJY/@@download/ENCFF562GJY.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF455PYV bed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 ENCFF386SPJ, ENCFF747NOF 5633743 ENCODE Processing Pipeline 2187595ea0aa96a6ba5b334a009d2dee https://www.encodeproject.org/files/ENCFF455PYV/@@download/ENCFF455PYV.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF729YXW bigBed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 ENCFF194XAP 13054300 ENCODE Processing Pipeline 0aa1b6a4fb15cdf69fd8fbb681ba8f0c https://www.encodeproject.org/files/ENCFF729YXW/@@download/ENCFF729YXW.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF194XAP bed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1 ENCFF183AOM, ENCFF346SPJ 5762378 ENCODE Processing Pipeline 2a6c137c287268a0a9158b33760653d8 https://www.encodeproject.org/files/ENCFF194XAP/@@download/ENCFF194XAP.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF888OLG bed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF183AOM, ENCFF346SPJ, ENCFF386SPJ, ENCFF747NOF 6803695 ENCODE Processing Pipeline 5080892fa50454524b90ba348018bda7 https://www.encodeproject.org/files/ENCFF888OLG/@@download/ENCFF888OLG.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF154RHL bigBed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 2 ENCFF455PYV 13403797 ENCODE Processing Pipeline 1c6108162f2b6f0b9de8bd72ae08deff https://www.encodeproject.org/files/ENCFF154RHL/@@download/ENCFF154RHL.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF421VXL bigBed narrowPeak peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF888OLG 13247692 ENCODE Processing Pipeline 3b159f48b31d43cb728425dd9bfa077d https://www.encodeproject.org/files/ENCFF421VXL/@@download/ENCFF421VXL.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF891JAX bed narrowPeak conservative idr thresholded peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF194XAP, ENCFF419RSJ, ENCFF455PYV, ENCFF888OLG 175231 ENCODE Processing Pipeline b93efdb933e03fd9cbceb817f50b86f7 https://www.encodeproject.org/files/ENCFF891JAX/@@download/ENCFF891JAX.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF173NBG bigBed narrowPeak conservative idr thresholded peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF891JAX 408517 ENCODE Processing Pipeline e093dc3456115c4489c28bf531b031a5 https://www.encodeproject.org/files/ENCFF173NBG/@@download/ENCFF173NBG.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF855SJG bed narrowPeak optimal idr thresholded peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF194XAP, ENCFF419RSJ, ENCFF455PYV, ENCFF888OLG 213654 ENCODE Processing Pipeline 3a660a224b00c18129ab276553653d1f https://www.encodeproject.org/files/ENCFF855SJG/@@download/ENCFF855SJG.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF870HED bigBed narrowPeak optimal idr thresholded peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF855SJG 551742 ENCODE Processing Pipeline 22d38f5adda7de0de2d7325d00092c9b https://www.encodeproject.org/files/ENCFF870HED/@@download/ENCFF870HED.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF173PXO bigBed narrowPeak optimal idr thresholded peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF711TMS 411605 ENCODE Processing Pipeline 5e4c90c9d69fada20f8c4bb427febc79 https://www.encodeproject.org/files/ENCFF173PXO/@@download/ENCFF173PXO.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF560LXS bigBed narrowPeak conservative idr thresholded peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF194YJY 301650 ENCODE Processing Pipeline f2dc5b0b07d1e54f95b5d114fc9d3350 https://www.encodeproject.org/files/ENCFF560LXS/@@download/ENCFF560LXS.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF194YJY bed narrowPeak conservative idr thresholded peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF001TDO, ENCFF413GIF, ENCFF553HHF, ENCFF794YQY 144623 ENCODE Processing Pipeline f06e872ab0f8312854eec27f9bac80f4 https://www.encodeproject.org/files/ENCFF194YJY/@@download/ENCFF194YJY.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF711TMS bed narrowPeak optimal idr thresholded peaks ENCSR251OVJ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens SMAD5-human ENCAB000AAG DNA False 2016-02-02 ENCODE 1, 2 ENCFF001TDO, ENCFF413GIF, ENCFF553HHF, ENCFF794YQY 173931 ENCODE Processing Pipeline ab21595564b935d834567abac5d3a9c9 https://www.encodeproject.org/files/ENCFF711TMS/@@download/ENCFF711TMS.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF000OIF bam alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OIR 728357068 Richard Myers, HAIB 3fa6a3fcd8dc53595e232355104af29c https://www.encodeproject.org/files/ENCFF000OIF/@@download/ENCFF000OIF.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIG bigBed broadPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZW 1278348 Richard Myers, HAIB 8c31221e920ba020359ce003e04c5ab3 https://www.encodeproject.org/files/ENCFF000OIG/@@download/ENCFF000OIG.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIH bigBed broadPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZX 1159080 Richard Myers, HAIB e1f5c6745d147fd72754e1bb6019423e https://www.encodeproject.org/files/ENCFF000OIH/@@download/ENCFF000OIH.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OII bam alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OIT 880137668 Richard Myers, HAIB f55c773a00eefdfd3bc15562999da582 https://www.encodeproject.org/files/ENCFF000OII/@@download/ENCFF000OII.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIK bigWig raw signal ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 33562910 Richard Myers, HAIB 64e45e93c5372916d79776cc37760e0a https://www.encodeproject.org/files/ENCFF000OIK/@@download/ENCFF000OIK.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OIL bigWig raw signal ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 36751976 Richard Myers, HAIB 38944650b1a637d665e5425e56fe2adf https://www.encodeproject.org/files/ENCFF000OIL/@@download/ENCFF000OIL.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OIR fastq reads ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 889516031 Richard Myers, HAIB cca243f091bce9050b9d5d64ba64192e https://www.encodeproject.org/files/ENCFF000OIR/@@download/ENCFF000OIR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIT fastq reads ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 891766558 Richard Myers, HAIB 0faee68e33abfa19325bc6be0092e94d https://www.encodeproject.org/files/ENCFF000OIT/@@download/ENCFF000OIT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001TZW bed broadPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 663194 Richard Myers, HAIB b07d8d41df4db864e7022aaa3c6f1335 https://www.encodeproject.org/files/ENCFF001TZW/@@download/ENCFF001TZW.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TZX bed broadPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 592546 Richard Myers, HAIB c39b3bef12ca1619611a15b70be817e6 https://www.encodeproject.org/files/ENCFF001TZX/@@download/ENCFF001TZX.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CIG bed narrowPeak optimal idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 335450 ENCODE Consortium Analysis Working Group 5f2bb1c4cc1250ef7ae35e464dcd390b https://www.encodeproject.org/files/ENCFF002CIG/@@download/ENCFF002CIG.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF788PEL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE ENCFF002CIG 848361 ENCODE Consortium e3eb81b8ef239b3ae1399c3aac21a2c8 https://www.encodeproject.org/files/ENCFF788PEL/@@download/ENCFF788PEL.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF102LCM bam alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIR, ENCFF643CGH 559647361 ENCODE Processing Pipeline 79252433b5481bd2313da115f8620ef2 https://www.encodeproject.org/files/ENCFF102LCM/@@download/ENCFF102LCM.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF967NMW bam unfiltered alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIR, ENCFF643CGH 1081137042 ENCODE Processing Pipeline be6a346b05b5856d0f9ff5a2dad32099 https://www.encodeproject.org/files/ENCFF967NMW/@@download/ENCFF967NMW.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF253DGW bam unfiltered alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIT, ENCFF643CGH 1123202029 ENCODE Processing Pipeline a41206059c68977eca25329c2c473935 https://www.encodeproject.org/files/ENCFF253DGW/@@download/ENCFF253DGW.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF810NAZ bam alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIT, ENCFF643CGH 712300408 ENCODE Processing Pipeline 42943b088451938fb38824be88de2290 https://www.encodeproject.org/files/ENCFF810NAZ/@@download/ENCFF810NAZ.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF629KMZ bam unfiltered alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIR, ENCFF807MUK 1080895147 ENCODE Processing Pipeline 6e3975a6bb47e21e805380be8981984f https://www.encodeproject.org/files/ENCFF629KMZ/@@download/ENCFF629KMZ.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF304KVB bam alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIR, ENCFF807MUK 553525130 ENCODE Processing Pipeline 49c99e6a7a5dbf539c9b3c9df38f8ea9 https://www.encodeproject.org/files/ENCFF304KVB/@@download/ENCFF304KVB.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF381JIW bam unfiltered alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIT, ENCFF807MUK 1121712225 ENCODE Processing Pipeline fd54526bb728c7c4f9ec747bde21839f https://www.encodeproject.org/files/ENCFF381JIW/@@download/ENCFF381JIW.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF512CKS bam alignments ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIT, ENCFF807MUK 708371792 ENCODE Processing Pipeline 1c7d496ddb483fd84c392549a89d09ba https://www.encodeproject.org/files/ENCFF512CKS/@@download/ENCFF512CKS.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF263EFS bigBed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF070YDC 11886526 ENCODE Processing Pipeline 4b5e82ea3939b67b06b7d73ee574fd89 https://www.encodeproject.org/files/ENCFF263EFS/@@download/ENCFF263EFS.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF633LKQ bed narrowPeak conservative idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF024AEU, ENCFF070YDC, ENCFF419RSJ, ENCFF775QFU 451513 ENCODE Processing Pipeline 1f641e5ed53c1f6e70a0f354d2eea4bd https://www.encodeproject.org/files/ENCFF633LKQ/@@download/ENCFF633LKQ.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF650DWL bigWig signal p-value ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF810NAZ, ENCFF857FLV 335079989 ENCODE Processing Pipeline 9680408ed6d3e025f216b41ead9cd072 https://www.encodeproject.org/files/ENCFF650DWL/@@download/ENCFF650DWL.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF362TSD bigBed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF024AEU 11988440 ENCODE Processing Pipeline af1b43aa8e302b441db50d779c7945ce https://www.encodeproject.org/files/ENCFF362TSD/@@download/ENCFF362TSD.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF549NCY bigWig signal p-value ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF102LCM, ENCFF810NAZ, ENCFF857FLV 351048542 ENCODE Processing Pipeline 9599ca2e15303d9231e7c45db530852c https://www.encodeproject.org/files/ENCFF549NCY/@@download/ENCFF549NCY.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF461ODG bigWig fold change over control ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF102LCM, ENCFF857FLV 192513123 ENCODE Processing Pipeline afc59f127d8a2a27464326b44e087cb1 https://www.encodeproject.org/files/ENCFF461ODG/@@download/ENCFF461ODG.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF775QFU bed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF102LCM, ENCFF857FLV 6161211 ENCODE Processing Pipeline e134b9b5d71d7353e5aa4fff53d97f0b https://www.encodeproject.org/files/ENCFF775QFU/@@download/ENCFF775QFU.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF205ZZA bed narrowPeak optimal idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF024AEU, ENCFF070YDC, ENCFF419RSJ, ENCFF775QFU 482045 ENCODE Processing Pipeline d5df0ae4e09dc935d99566c73f08b6e3 https://www.encodeproject.org/files/ENCFF205ZZA/@@download/ENCFF205ZZA.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF457EXX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF205ZZA 1052292 ENCODE Processing Pipeline 64cb5358320c415149912b0ccaada9e6 https://www.encodeproject.org/files/ENCFF457EXX/@@download/ENCFF457EXX.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF271QNM bigWig signal p-value ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF102LCM, ENCFF857FLV 295439959 ENCODE Processing Pipeline 7446f191a829ac1aa8091d674b83d952 https://www.encodeproject.org/files/ENCFF271QNM/@@download/ENCFF271QNM.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF543NDS bigWig fold change over control ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF810NAZ, ENCFF857FLV 255538882 ENCODE Processing Pipeline 2c109d1f42087c0daa0ea200ba6a596f https://www.encodeproject.org/files/ENCFF543NDS/@@download/ENCFF543NDS.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF998MBP bigWig fold change over control ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF102LCM, ENCFF810NAZ, ENCFF857FLV 390880232 ENCODE Processing Pipeline 842354ffbf6bbdc22e995de7bb3c38ef https://www.encodeproject.org/files/ENCFF998MBP/@@download/ENCFF998MBP.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF070YDC bed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF810NAZ, ENCFF857FLV 6295058 ENCODE Processing Pipeline e44c60aebd5b4532b659ee664caabd35 https://www.encodeproject.org/files/ENCFF070YDC/@@download/ENCFF070YDC.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF024AEU bed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF102LCM, ENCFF810NAZ, ENCFF857FLV 7053554 ENCODE Processing Pipeline bf1d591d535b8ab505cff96727af456d https://www.encodeproject.org/files/ENCFF024AEU/@@download/ENCFF024AEU.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF383EBR bigBed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF775QFU 11406876 ENCODE Processing Pipeline ba52ed5e25ee1746239c70532f5ae899 https://www.encodeproject.org/files/ENCFF383EBR/@@download/ENCFF383EBR.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF272EBE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF633LKQ 1006333 ENCODE Processing Pipeline 4d23a38a347827366fbd54e06e051dc4 https://www.encodeproject.org/files/ENCFF272EBE/@@download/ENCFF272EBE.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF664IBD bigWig signal p-value ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF304KVB, ENCFF512CKS, ENCFF864ASU 351602804 ENCODE Processing Pipeline 86f504c7925b63edee0a024656589d01 https://www.encodeproject.org/files/ENCFF664IBD/@@download/ENCFF664IBD.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF725HKP bed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF304KVB, ENCFF864ASU 6156486 ENCODE Processing Pipeline a6bc49f80eeec86bec0c7bdef7051b36 https://www.encodeproject.org/files/ENCFF725HKP/@@download/ENCFF725HKP.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF524QYS bed narrowPeak conservative idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF333UMD, ENCFF409BYD, ENCFF725HKP 407406 ENCODE Processing Pipeline e93ed30de4aeb7cfb2a88bf3f5e25e79 https://www.encodeproject.org/files/ENCFF524QYS/@@download/ENCFF524QYS.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF771SMT bigWig signal p-value ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF512CKS, ENCFF864ASU 337254440 ENCODE Processing Pipeline 4b321ca61a3c4d624c057d5fb7a7630e https://www.encodeproject.org/files/ENCFF771SMT/@@download/ENCFF771SMT.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF333UMD bed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF512CKS, ENCFF864ASU 6362058 ENCODE Processing Pipeline 282a4378128a43c6e1b884bdb02b42e3 https://www.encodeproject.org/files/ENCFF333UMD/@@download/ENCFF333UMD.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF509SBU bigBed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF725HKP 11405931 ENCODE Processing Pipeline fe9ee59cc24140598bf2cca6a73f835a https://www.encodeproject.org/files/ENCFF509SBU/@@download/ENCFF509SBU.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF523YAC bigBed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF333UMD 11963313 ENCODE Processing Pipeline 5f917a0d4a25ab054b0c3aafe7848533 https://www.encodeproject.org/files/ENCFF523YAC/@@download/ENCFF523YAC.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF738VAS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF887VSS 996000 ENCODE Processing Pipeline 7390d87d7eaa3e3d79357061b2ca36ec https://www.encodeproject.org/files/ENCFF738VAS/@@download/ENCFF738VAS.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF989ZKQ bigWig signal p-value ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF304KVB, ENCFF864ASU 332124056 ENCODE Processing Pipeline 5aab2fa1686cca48c11d96e1fceaf629 https://www.encodeproject.org/files/ENCFF989ZKQ/@@download/ENCFF989ZKQ.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF409BYD bed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF304KVB, ENCFF512CKS, ENCFF864ASU 6826946 ENCODE Processing Pipeline 1939bdda0ef2e8534d9799c664babe29 https://www.encodeproject.org/files/ENCFF409BYD/@@download/ENCFF409BYD.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF288OCG bigBed narrowPeak peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF409BYD 11756996 ENCODE Processing Pipeline 1c3f40a494ba6aa3088efb9181467643 https://www.encodeproject.org/files/ENCFF288OCG/@@download/ENCFF288OCG.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF174ECR bigWig fold change over control ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF304KVB, ENCFF512CKS, ENCFF864ASU 388580587 ENCODE Processing Pipeline 8734afabfadb75b7e527a7000406d168 https://www.encodeproject.org/files/ENCFF174ECR/@@download/ENCFF174ECR.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF914IHS bigWig fold change over control ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF304KVB, ENCFF864ASU 192087158 ENCODE Processing Pipeline f2ddff2a7876cf419ed00a1c6185ee7a https://www.encodeproject.org/files/ENCFF914IHS/@@download/ENCFF914IHS.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF105AYM bigWig fold change over control ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF512CKS, ENCFF864ASU 257703881 ENCODE Processing Pipeline 4daee20e0b4a5448fd74161b6b0f7aeb https://www.encodeproject.org/files/ENCFF105AYM/@@download/ENCFF105AYM.bigWig hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF282ATZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF524QYS 944736 ENCODE Processing Pipeline ae0647339093e008195d53dc690c6546 https://www.encodeproject.org/files/ENCFF282ATZ/@@download/ENCFF282ATZ.bigBed hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF887VSS bed narrowPeak optimal idr thresholded peaks ENCSR000BIL ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF333UMD, ENCFF409BYD, ENCFF725HKP 439631 ENCODE Processing Pipeline d3b237e3899e70e156920354564054ab https://www.encodeproject.org/files/ENCFF887VSS/@@download/ENCFF887VSS.bed.gz hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF769AJC fastq reads ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 1 50 single-ended 986849985 Richard Myers, HAIB 21781ceb8bcee4fb0e7da2e8c16298ba SRA:SRR5339582 https://www.encodeproject.org/files/ENCFF769AJC/@@download/ENCFF769AJC.fastq.gz HiSeq 2000 /files/ENCFF484RXR/ released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF566LFO fastq reads ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 1 50 single-ended 968347710 Richard Myers, HAIB 8c337182a851fbc8e96263e91da3132f SRA:SRR5339581 https://www.encodeproject.org/files/ENCFF566LFO/@@download/ENCFF566LFO.fastq.gz HiSeq 2000 /files/ENCFF252PYF/ released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF921LBH bigWig signal p-value ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 ENCFF242CDB, ENCFF956QBZ 439839482 ENCODE Processing Pipeline 43a554edc0d4831f5a0d2964890dace2 https://www.encodeproject.org/files/ENCFF921LBH/@@download/ENCFF921LBH.bigWig hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF809VXE bigWig signal p-value ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 ENCFF017YFK, ENCFF380SLU 592576111 ENCODE Processing Pipeline c9ec6cbe4ee814de844e47e83f297575 https://www.encodeproject.org/files/ENCFF809VXE/@@download/ENCFF809VXE.bigWig hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF832IJN bigWig signal p-value ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF017YFK, ENCFF242CDB, ENCFF380SLU, ENCFF956QBZ 849950265 ENCODE Processing Pipeline e581a07fe4065ffd98bb24b73cf5fc61 https://www.encodeproject.org/files/ENCFF832IJN/@@download/ENCFF832IJN.bigWig hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF596MAH bigWig fold change over control ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 ENCFF242CDB, ENCFF956QBZ 288373589 ENCODE Processing Pipeline a1e4969316ad48b29f1e3134ac5ac643 https://www.encodeproject.org/files/ENCFF596MAH/@@download/ENCFF596MAH.bigWig hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF786KBL bigWig fold change over control ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF017YFK, ENCFF242CDB, ENCFF380SLU, ENCFF956QBZ 676912925 ENCODE Processing Pipeline 7a865181aaf1c59ae7afb837ac5561b3 https://www.encodeproject.org/files/ENCFF786KBL/@@download/ENCFF786KBL.bigWig hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF028LSE bam unfiltered alignments ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 50 ENCFF566LFO, ENCFF643CGH 955758430 ENCODE Processing Pipeline 8c6689ea9bcff4da2199dfe54bf26812 https://www.encodeproject.org/files/ENCFF028LSE/@@download/ENCFF028LSE.bam GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF244ZCX bam unfiltered alignments ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF769AJC 1009864057 ENCODE Processing Pipeline 83aa4b482a2af7549f25a9ea16219e7b https://www.encodeproject.org/files/ENCFF244ZCX/@@download/ENCFF244ZCX.bam GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF102OPY bam alignments ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 50 ENCFF566LFO, ENCFF643CGH 667499788 ENCODE Processing Pipeline cedff6080f7eb97a6a72bd9543d2afbf https://www.encodeproject.org/files/ENCFF102OPY/@@download/ENCFF102OPY.bam GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF703HZB bam alignments ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 50 ENCFF643CGH, ENCFF769AJC 756416501 ENCODE Processing Pipeline 2d8d31894d362f4818c361670936d89a https://www.encodeproject.org/files/ENCFF703HZB/@@download/ENCFF703HZB.bam GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF391AZY bigWig fold change over control ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF102OPY, ENCFF341IVK, ENCFF703HZB, ENCFF982GQU 681818883 ENCODE Processing Pipeline 2b71ea6c37c9dad48edc0003448b36ce https://www.encodeproject.org/files/ENCFF391AZY/@@download/ENCFF391AZY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF817EYT bigWig fold change over control ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 ENCFF703HZB, ENCFF982GQU 345787847 ENCODE Processing Pipeline 1b5d4cd709143a3fbb7f53cc80fbd245 https://www.encodeproject.org/files/ENCFF817EYT/@@download/ENCFF817EYT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF196KFJ bed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 ENCFF703HZB, ENCFF982GQU 4603363 ENCODE Processing Pipeline 9fc653908a3341d9a408e8124be15f67 https://www.encodeproject.org/files/ENCFF196KFJ/@@download/ENCFF196KFJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF998VXJ bigWig signal p-value ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 ENCFF703HZB, ENCFF982GQU 484015936 ENCODE Processing Pipeline 40e93c86f9cb3a2041e7331ad0e4eba6 https://www.encodeproject.org/files/ENCFF998VXJ/@@download/ENCFF998VXJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF910RRX bigWig fold change over control ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 ENCFF102OPY, ENCFF341IVK 287769682 ENCODE Processing Pipeline 7cebf6b5126d6ea688a67097e36fdda3 https://www.encodeproject.org/files/ENCFF910RRX/@@download/ENCFF910RRX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF786AIF bed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF102OPY, ENCFF341IVK, ENCFF703HZB, ENCFF982GQU 5903062 ENCODE Processing Pipeline cbbe204694b207f0d3e3ff1b52111d8d https://www.encodeproject.org/files/ENCFF786AIF/@@download/ENCFF786AIF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF679QDJ bigWig signal p-value ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 ENCFF102OPY, ENCFF341IVK 522645556 ENCODE Processing Pipeline 232391d56032ebf7dd39647d52ef2891 https://www.encodeproject.org/files/ENCFF679QDJ/@@download/ENCFF679QDJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF749VGL bigBed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 ENCFF196KFJ 11117256 ENCODE Processing Pipeline 3c16b77c48346c1acb307fc903b09671 https://www.encodeproject.org/files/ENCFF749VGL/@@download/ENCFF749VGL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF322WKG bed narrowPeak optimal idr thresholded peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF005HJQ, ENCFF196KFJ, ENCFF419RSJ, ENCFF786AIF 1430302 ENCODE Processing Pipeline cfb4793b08a86db7181ca5d70b260615 https://www.encodeproject.org/files/ENCFF322WKG/@@download/ENCFF322WKG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF831DQC bigWig signal p-value ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF102OPY, ENCFF341IVK, ENCFF703HZB, ENCFF982GQU 785281403 ENCODE Processing Pipeline 1b3199f44b31b5fe247f2f1b71dc08f6 https://www.encodeproject.org/files/ENCFF831DQC/@@download/ENCFF831DQC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF561KAW bigBed narrowPeak optimal idr thresholded peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF322WKG 2389904 ENCODE Processing Pipeline fafb9420e05cd15f557d83cf4b8bace7 https://www.encodeproject.org/files/ENCFF561KAW/@@download/ENCFF561KAW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF005HJQ bed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 ENCFF102OPY, ENCFF341IVK 4983249 ENCODE Processing Pipeline 22395be03008a7a2a686724b5691b2c2 https://www.encodeproject.org/files/ENCFF005HJQ/@@download/ENCFF005HJQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF692ATV bigBed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 ENCFF005HJQ 11506890 ENCODE Processing Pipeline ede2d664057df20d2efddbd40b7d4fe4 https://www.encodeproject.org/files/ENCFF692ATV/@@download/ENCFF692ATV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF209PMT bigBed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF786AIF 12354710 ENCODE Processing Pipeline 8912ecac76e4962181d24377e999af55 https://www.encodeproject.org/files/ENCFF209PMT/@@download/ENCFF209PMT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF050ATK bam unfiltered alignments ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 50 ENCFF566LFO, ENCFF807MUK 954570976 ENCODE Processing Pipeline 3c7802a4ad6ef8c88d154b6dc388fc3f https://www.encodeproject.org/files/ENCFF050ATK/@@download/ENCFF050ATK.bam hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF033NJM bam unfiltered alignments ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 50 ENCFF769AJC, ENCFF807MUK 1008569114 ENCODE Processing Pipeline 404d5ad37dff2d482a71b06464f76fb7 https://www.encodeproject.org/files/ENCFF033NJM/@@download/ENCFF033NJM.bam hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF242CDB bam alignments ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 50 ENCFF566LFO, ENCFF807MUK 667611071 ENCODE Processing Pipeline e150a9948ff9b653a31d14031c098d3b https://www.encodeproject.org/files/ENCFF242CDB/@@download/ENCFF242CDB.bam hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF380SLU bam alignments ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 50 ENCFF769AJC, ENCFF807MUK 756470225 ENCODE Processing Pipeline 4d5c6d56c6004849c5f5a75efc02fe86 https://www.encodeproject.org/files/ENCFF380SLU/@@download/ENCFF380SLU.bam hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF346PQE bed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 ENCFF017YFK, ENCFF380SLU 4618205 ENCODE Processing Pipeline ad133f9bd7f1ba8b63b9aff213a67e14 https://www.encodeproject.org/files/ENCFF346PQE/@@download/ENCFF346PQE.bed.gz hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF414BJO bed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 ENCFF242CDB, ENCFF956QBZ 4977831 ENCODE Processing Pipeline 7c7077dee92bb8fba520d21de724eb86 https://www.encodeproject.org/files/ENCFF414BJO/@@download/ENCFF414BJO.bed.gz hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF661MCK bed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF017YFK, ENCFF242CDB, ENCFF380SLU, ENCFF956QBZ 5902870 ENCODE Processing Pipeline ba3c6f9b7274c15aeacb943cc08e1433 https://www.encodeproject.org/files/ENCFF661MCK/@@download/ENCFF661MCK.bed.gz hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF644MKJ bigBed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1 ENCFF346PQE 11139110 ENCODE Processing Pipeline d800d15a2209d7e0e17123bcd82866df https://www.encodeproject.org/files/ENCFF644MKJ/@@download/ENCFF644MKJ.bigBed hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF153YZR bigBed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 2 ENCFF414BJO 11499443 ENCODE Processing Pipeline 58b0aeee97cec4e87caa20cd4b99d447 https://www.encodeproject.org/files/ENCFF153YZR/@@download/ENCFF153YZR.bigBed hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF936KAM bigBed narrowPeak peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF661MCK 12347214 ENCODE Processing Pipeline b51e80083ff5f04f3853cc78fa19f2f0 https://www.encodeproject.org/files/ENCFF936KAM/@@download/ENCFF936KAM.bigBed hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF760HUV bed narrowPeak optimal idr thresholded peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF346PQE, ENCFF414BJO, ENCFF661MCK 1427699 ENCODE Processing Pipeline 4afa784408ac7c6d1be29f75f613ebeb https://www.encodeproject.org/files/ENCFF760HUV/@@download/ENCFF760HUV.bed.gz hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF109FNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR932ZMX ChIP-seq EFO:0007950 GM23338 induced pluripotent stem cell line adult male 53 year Homo sapiens CTCF-human ENCAB247TYO DNA False 2016-06-30 ENCODE 1, 2 ENCFF760HUV 2385055 ENCODE Processing Pipeline 07ce9fb9d790cf13132524c0240e77d6 https://www.encodeproject.org/files/ENCFF109FNZ/@@download/ENCFF109FNZ.bigBed hg19 released low read depth, mild to moderate bottlenecking NTR biosample partially characterized antibody ENCFF000PSL bam alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PST 746950859 Richard Myers, HAIB 55c0a25b0d3c98c95cf149c87acf1e34 https://www.encodeproject.org/files/ENCFF000PSL/@@download/ENCFF000PSL.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PSM bigBed broadPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UIE 77491 Richard Myers, HAIB 6132846a1117000c9629e10a712618c9 https://www.encodeproject.org/files/ENCFF000PSM/@@download/ENCFF000PSM.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PSN bigBed broadPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UIF 92700 Richard Myers, HAIB 3ad532367606dc2cdc86e5f1652554a3 https://www.encodeproject.org/files/ENCFF000PSN/@@download/ENCFF000PSN.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PSO bam alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PSY 942007295 Richard Myers, HAIB 41af10ff8357165df730b8f8354c53ba https://www.encodeproject.org/files/ENCFF000PSO/@@download/ENCFF000PSO.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PSQ bigWig raw signal ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 14631361 Richard Myers, HAIB b5ad25fad263c3ac00548625dd802f83 https://www.encodeproject.org/files/ENCFF000PSQ/@@download/ENCFF000PSQ.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PSR bigWig raw signal ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 4302484 Richard Myers, HAIB a5b8df829d367170d7dc0e3005f9b989 https://www.encodeproject.org/files/ENCFF000PSR/@@download/ENCFF000PSR.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PST fastq reads ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 773525066 Richard Myers, HAIB f6c4f4bce873aee336425a7418c8feee https://www.encodeproject.org/files/ENCFF000PST/@@download/ENCFF000PST.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PSY fastq reads ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 889766438 Richard Myers, HAIB 7f4d2d312d0ac300b1652f07f6d38b92 https://www.encodeproject.org/files/ENCFF000PSY/@@download/ENCFF000PSY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UIE bed broadPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 20274 Richard Myers, HAIB 787744e4c9a5ad212041f5767aa17b0c https://www.encodeproject.org/files/ENCFF001UIE/@@download/ENCFF001UIE.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UIF bed broadPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 31317 Richard Myers, HAIB 3af756481ff453307b62c801b2b29a1f https://www.encodeproject.org/files/ENCFF001UIF/@@download/ENCFF001UIF.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF280TIY bam unfiltered alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PST, ENCFF643CGH 905746783 ENCODE Processing Pipeline 90a4c44597aed77b45fa3caa3414bc74 https://www.encodeproject.org/files/ENCFF280TIY/@@download/ENCFF280TIY.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF015CKI bam alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PST, ENCFF643CGH 371897305 ENCODE Processing Pipeline e25a252f06fdad18e5d4c7bbc6011f04 https://www.encodeproject.org/files/ENCFF015CKI/@@download/ENCFF015CKI.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF148ZDV bam alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSY, ENCFF643CGH 699288859 ENCODE Processing Pipeline 50f48e0d2be34b6b5244471754b9ce96 https://www.encodeproject.org/files/ENCFF148ZDV/@@download/ENCFF148ZDV.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF712OEW bam unfiltered alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSY, ENCFF643CGH 1114817884 ENCODE Processing Pipeline d58dbe10caba6ae8ce7ba4d6c5302930 https://www.encodeproject.org/files/ENCFF712OEW/@@download/ENCFF712OEW.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF760RWX bam alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PST, ENCFF807MUK 372060688 ENCODE Processing Pipeline e7ee799b36cc4d7ecc115dfa18692364 https://www.encodeproject.org/files/ENCFF760RWX/@@download/ENCFF760RWX.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF105GEI bam unfiltered alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PST, ENCFF807MUK 903466072 ENCODE Processing Pipeline 3de7b8b5febfadb003c84af9ba3f92f5 https://www.encodeproject.org/files/ENCFF105GEI/@@download/ENCFF105GEI.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF307ZMA bam unfiltered alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSY, ENCFF807MUK 1110533079 ENCODE Processing Pipeline 844d69401d3aa400113fb1883360c389 https://www.encodeproject.org/files/ENCFF307ZMA/@@download/ENCFF307ZMA.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF616LIW bam alignments ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PSY, ENCFF807MUK 699668418 ENCODE Processing Pipeline 1b10803f83ff1f849cff7386c1a34db4 https://www.encodeproject.org/files/ENCFF616LIW/@@download/ENCFF616LIW.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF556VWG bed narrowPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015CKI, ENCFF285LVE 2882635 ENCODE Processing Pipeline 32ba296acd409bb3845a596deb844e9f https://www.encodeproject.org/files/ENCFF556VWG/@@download/ENCFF556VWG.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF943WRA bed narrowPeak optimal idr thresholded peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF328MZT, ENCFF330HXJ, ENCFF419RSJ, ENCFF556VWG 41370 ENCODE Processing Pipeline e74f575154c0e01e60cb2d1a37c11d27 https://www.encodeproject.org/files/ENCFF943WRA/@@download/ENCFF943WRA.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF495SGU bigWig fold change over control ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015CKI, ENCFF285LVE 225643272 ENCODE Processing Pipeline d83c9bf240ab090e9bb6c3141c2d7626 https://www.encodeproject.org/files/ENCFF495SGU/@@download/ENCFF495SGU.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF775BPB bigWig signal p-value ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF148ZDV, ENCFF175NMQ 506757648 ENCODE Processing Pipeline aac12e7475dda912befd26d8de39f31f https://www.encodeproject.org/files/ENCFF775BPB/@@download/ENCFF775BPB.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF214EIE bigWig signal p-value ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015CKI, ENCFF148ZDV, ENCFF175NMQ, ENCFF285LVE 791239225 ENCODE Processing Pipeline cf76eb27cdf73299fa84a881c405117f https://www.encodeproject.org/files/ENCFF214EIE/@@download/ENCFF214EIE.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF666YDH bigWig signal p-value ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015CKI, ENCFF285LVE 418562919 ENCODE Processing Pipeline 7800b837db2c0494612d31cd900c4105 https://www.encodeproject.org/files/ENCFF666YDH/@@download/ENCFF666YDH.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF782FEX bigWig fold change over control ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF148ZDV, ENCFF175NMQ 376312245 ENCODE Processing Pipeline aae1d7f1983d858dca45fb85c4462f69 https://www.encodeproject.org/files/ENCFF782FEX/@@download/ENCFF782FEX.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF336BUE bigWig fold change over control ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015CKI, ENCFF148ZDV, ENCFF175NMQ, ENCFF285LVE 706341028 ENCODE Processing Pipeline c938fb9e903c9af5ba46603ac4997d21 https://www.encodeproject.org/files/ENCFF336BUE/@@download/ENCFF336BUE.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF330HXJ bed narrowPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF148ZDV, ENCFF175NMQ 3980805 ENCODE Processing Pipeline f4ac0094f316c258e35ea0626b6ecc18 https://www.encodeproject.org/files/ENCFF330HXJ/@@download/ENCFF330HXJ.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF328MZT bed narrowPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015CKI, ENCFF148ZDV, ENCFF175NMQ, ENCFF285LVE 4996965 ENCODE Processing Pipeline 5720efefec9cfaabf476f1e33067e00c https://www.encodeproject.org/files/ENCFF328MZT/@@download/ENCFF328MZT.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF358XRJ bigBed narrowPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF556VWG 6257224 ENCODE Processing Pipeline b5a0f1913aa6065d42c66ccce34f35ec https://www.encodeproject.org/files/ENCFF358XRJ/@@download/ENCFF358XRJ.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF658YNE bigBed narrowPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF330HXJ 10395803 ENCODE Processing Pipeline 210e39457341ffae66c9fa8c0b3187ea https://www.encodeproject.org/files/ENCFF658YNE/@@download/ENCFF658YNE.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF377RHL bigBed narrowPeak peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF328MZT 11400576 ENCODE Processing Pipeline b7a93b5f1e2ffbdfe30e46afa72c37a0 https://www.encodeproject.org/files/ENCFF377RHL/@@download/ENCFF377RHL.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF173UJG bed narrowPeak conservative idr thresholded peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF328MZT, ENCFF330HXJ, ENCFF419RSJ, ENCFF556VWG 34750 ENCODE Processing Pipeline dce02a0eb1217bd475e54951b08e7833 https://www.encodeproject.org/files/ENCFF173UJG/@@download/ENCFF173UJG.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF008HCL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF173UJG 108383 ENCODE Processing Pipeline 704aaa9270a4a43bc54c672fe36081b6 https://www.encodeproject.org/files/ENCFF008HCL/@@download/ENCFF008HCL.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF569YXF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNA ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF943WRA 116526 ENCODE Processing Pipeline 10d8774ab5a6c4b6d076b69e1f8b97d6 https://www.encodeproject.org/files/ENCFF569YXF/@@download/ENCFF569YXF.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF663CEY fastq reads ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF913NPA 1684871674 Richard Myers, HAIB c2afbb60563033be96b4593e92526fe2 SRA:SRR6214395 https://www.encodeproject.org/files/ENCFF663CEY/@@download/ENCFF663CEY.fastq.gz HiSeq 2000 /files/ENCFF846FCW/ released antibody characterized with exemption ENCFF913NPA fastq reads ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF663CEY 1711729540 Richard Myers, HAIB 92cf04a7fa25ebac42ed4e7e193d184d SRA:SRR6214395 https://www.encodeproject.org/files/ENCFF913NPA/@@download/ENCFF913NPA.fastq.gz HiSeq 2000 /files/ENCFF908NQG/ released antibody characterized with exemption ENCFF502VMV bam alignments ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF663CEY, ENCFF807MUK, ENCFF913NPA 3262396096 ENCODE Processing Pipeline c4a801151deae364344436f93b29a805 https://www.encodeproject.org/files/ENCFF502VMV/@@download/ENCFF502VMV.bam hg19 released antibody characterized with exemption ENCFF137GRY bam unfiltered alignments ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF663CEY, ENCFF807MUK, ENCFF913NPA 4198375068 ENCODE Processing Pipeline b52806a1b5aa9c029e6875c0df7acebb https://www.encodeproject.org/files/ENCFF137GRY/@@download/ENCFF137GRY.bam hg19 released antibody characterized with exemption ENCFF300ZIE bam unfiltered alignments ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF663CEY, ENCFF913NPA 4216382802 ENCODE Processing Pipeline ebd26b37f3e96506f4984494a400ca14 https://www.encodeproject.org/files/ENCFF300ZIE/@@download/ENCFF300ZIE.bam GRCh38 released antibody characterized with exemption ENCFF840PIA bam alignments ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF663CEY, ENCFF913NPA 3263792119 ENCODE Processing Pipeline 61148116a4c6c67c98a9424a84deb3c7 https://www.encodeproject.org/files/ENCFF840PIA/@@download/ENCFF840PIA.bam GRCh38 released antibody characterized with exemption ENCFF823TXL bigWig signal p-value ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF840PIA 1315973647 ENCODE Processing Pipeline bce038d702fb8769ec0bd34f06e064cd https://www.encodeproject.org/files/ENCFF823TXL/@@download/ENCFF823TXL.bigWig GRCh38 released antibody characterized with exemption ENCFF078WGV bigWig fold change over control ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF840PIA 1218285039 ENCODE Processing Pipeline 65c35b1a3ec21e4ff4de39137486c13c https://www.encodeproject.org/files/ENCFF078WGV/@@download/ENCFF078WGV.bigWig GRCh38 released antibody characterized with exemption ENCFF432EAC bed narrowPeak peaks ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF840PIA 5710908 ENCODE Processing Pipeline 8fe1105e4e3ed31806886cad3132f062 https://www.encodeproject.org/files/ENCFF432EAC/@@download/ENCFF432EAC.bed.gz GRCh38 released antibody characterized with exemption ENCFF637WYM bigBed narrowPeak peaks ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF432EAC 11818079 ENCODE Processing Pipeline 13925dbde7cb2498788edecb38063833 https://www.encodeproject.org/files/ENCFF637WYM/@@download/ENCFF637WYM.bigBed GRCh38 released antibody characterized with exemption ENCFF015BDX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF081YBG 100409 ENCODE Processing Pipeline 5bbb35a5a88fc64d77e8322417bf9fad https://www.encodeproject.org/files/ENCFF015BDX/@@download/ENCFF015BDX.bigBed GRCh38 released antibody characterized with exemption ENCFF081YBG bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF432EAC 23699 ENCODE Processing Pipeline 3241a6616523f74ab8b7e3b89da0cff3 https://www.encodeproject.org/files/ENCFF081YBG/@@download/ENCFF081YBG.bed.gz GRCh38 released antibody characterized with exemption ENCFF118YWP bigWig signal p-value ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF502VMV 1171645927 ENCODE Processing Pipeline a2bab111836aa33be0039e8ce0a5f187 https://www.encodeproject.org/files/ENCFF118YWP/@@download/ENCFF118YWP.bigWig hg19 released antibody characterized with exemption ENCFF662PQB bigBed narrowPeak peaks ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF305OFV 11800597 ENCODE Processing Pipeline d9be75c4062e286c6e46c46fab7fb9eb https://www.encodeproject.org/files/ENCFF662PQB/@@download/ENCFF662PQB.bigBed hg19 released antibody characterized with exemption ENCFF539NOL bigWig fold change over control ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF502VMV 1217668924 ENCODE Processing Pipeline 5b9db66a08c1e4850fc0d652115efeed https://www.encodeproject.org/files/ENCFF539NOL/@@download/ENCFF539NOL.bigWig hg19 released antibody characterized with exemption ENCFF305OFV bed narrowPeak peaks ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF502VMV 5707914 ENCODE Processing Pipeline 3977eb99d78fe78ea670cee7e4a9bd35 https://www.encodeproject.org/files/ENCFF305OFV/@@download/ENCFF305OFV.bed.gz hg19 released antibody characterized with exemption ENCFF451VDG bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF305OFV 24272 ENCODE Processing Pipeline 8be354c4831004be35200c1c4c4c610e https://www.encodeproject.org/files/ENCFF451VDG/@@download/ENCFF451VDG.bed.gz hg19 released antibody characterized with exemption ENCFF812WHU bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR891WPD ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF451VDG 100510 ENCODE Processing Pipeline 3fa66c582d563ecabb69edeb6a48d89b https://www.encodeproject.org/files/ENCFF812WHU/@@download/ENCFF812WHU.bigBed hg19 released antibody characterized with exemption ENCFF717LYI fastq reads ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF871GPP 3193221878 Richard Myers, HAIB c5cb9bf8733b06965bb43ac8571c4a65 SRA:SRR6213934 https://www.encodeproject.org/files/ENCFF717LYI/@@download/ENCFF717LYI.fastq.gz HiSeq 2000 /files/ENCFF184TJX/ released antibody characterized with exemption ENCFF871GPP fastq reads ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF717LYI 3258535965 Richard Myers, HAIB a09ab9431598ed69f11b212e746e6a9e SRA:SRR6213934 https://www.encodeproject.org/files/ENCFF871GPP/@@download/ENCFF871GPP.fastq.gz HiSeq 2000 /files/ENCFF035HZW/ released antibody characterized with exemption ENCFF254ZJE bam unfiltered alignments ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF717LYI, ENCFF807MUK, ENCFF871GPP 7435021739 ENCODE Processing Pipeline 6bffe8fe53fc572e65977a35cf7c8757 https://www.encodeproject.org/files/ENCFF254ZJE/@@download/ENCFF254ZJE.bam hg19 released antibody characterized with exemption ENCFF515DIW bam alignments ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF717LYI, ENCFF807MUK, ENCFF871GPP 5176351985 ENCODE Processing Pipeline 23472d86481e48aba8bd058945077839 https://www.encodeproject.org/files/ENCFF515DIW/@@download/ENCFF515DIW.bam hg19 released antibody characterized with exemption ENCFF219BLO bam unfiltered alignments ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF717LYI, ENCFF871GPP 7463284037 ENCODE Processing Pipeline 8489cbf9ddd04070b0cf2950c1bd415e https://www.encodeproject.org/files/ENCFF219BLO/@@download/ENCFF219BLO.bam GRCh38 released antibody characterized with exemption ENCFF169HTN bam alignments ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF643CGH, ENCFF717LYI, ENCFF871GPP 5180266704 ENCODE Processing Pipeline fcb4cb4fe6f7aa396a79d272cbece828 https://www.encodeproject.org/files/ENCFF169HTN/@@download/ENCFF169HTN.bam GRCh38 released antibody characterized with exemption ENCFF116JXQ bigWig signal p-value ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF169HTN 1058442547 ENCODE Processing Pipeline 706ffedf116f447d6834003539aa17e9 https://www.encodeproject.org/files/ENCFF116JXQ/@@download/ENCFF116JXQ.bigWig GRCh38 released antibody characterized with exemption ENCFF587VFM bigWig fold change over control ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF169HTN 1442396054 ENCODE Processing Pipeline 4f71ed4b86386777b6ef7d24b899c64b https://www.encodeproject.org/files/ENCFF587VFM/@@download/ENCFF587VFM.bigWig GRCh38 released antibody characterized with exemption ENCFF047TQD bigBed narrowPeak peaks ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF797KQK 11590773 ENCODE Processing Pipeline 4df2b04833e1bd72b666bd3490c14a15 https://www.encodeproject.org/files/ENCFF047TQD/@@download/ENCFF047TQD.bigBed GRCh38 released antibody characterized with exemption ENCFF797KQK bed narrowPeak peaks ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF169HTN 6074719 ENCODE Processing Pipeline 0729b3f073994191e9d2f45ee4a87553 https://www.encodeproject.org/files/ENCFF797KQK/@@download/ENCFF797KQK.bed.gz GRCh38 released antibody characterized with exemption ENCFF169FFA bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF797KQK 296099 ENCODE Processing Pipeline ba3d346641cd9e4fbb89a59cba2772b0 https://www.encodeproject.org/files/ENCFF169FFA/@@download/ENCFF169FFA.bed.gz GRCh38 released antibody characterized with exemption ENCFF760UXE bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF169FFA 561151 ENCODE Processing Pipeline bd145bb10815b73c217e974bf5fb7cda https://www.encodeproject.org/files/ENCFF760UXE/@@download/ENCFF760UXE.bigBed GRCh38 released antibody characterized with exemption ENCFF217INB bigWig fold change over control ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF515DIW 1455683870 ENCODE Processing Pipeline e0712c4fe8f4f19e3f8d68fbd212bd46 https://www.encodeproject.org/files/ENCFF217INB/@@download/ENCFF217INB.bigWig hg19 released antibody characterized with exemption ENCFF780GBG bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF531NFE 554481 ENCODE Processing Pipeline 63f1b71e207535f5bd2025dc23e18885 https://www.encodeproject.org/files/ENCFF780GBG/@@download/ENCFF780GBG.bigBed hg19 released antibody characterized with exemption ENCFF750XPB bigWig signal p-value ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF515DIW 1059275346 ENCODE Processing Pipeline 7d7286649547b9a05d2faf7da634ed6c https://www.encodeproject.org/files/ENCFF750XPB/@@download/ENCFF750XPB.bigWig hg19 released antibody characterized with exemption ENCFF817OVB bed narrowPeak peaks ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF515DIW 6077512 ENCODE Processing Pipeline 2fede9d02cf0ca5fc60ea7dbc30148c1 https://www.encodeproject.org/files/ENCFF817OVB/@@download/ENCFF817OVB.bed.gz hg19 released antibody characterized with exemption ENCFF724YOE bigBed narrowPeak peaks ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF817OVB 11577592 ENCODE Processing Pipeline 7b59f43f31272b8477c1957b8e5177c9 https://www.encodeproject.org/files/ENCFF724YOE/@@download/ENCFF724YOE.bigBed hg19 released antibody characterized with exemption ENCFF531NFE bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR906UPC ChIP-seq UBERON:0001159 sigmoid colon tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF817OVB 293268 ENCODE Processing Pipeline f63450c53cb4521a536bafa63dbb19e9 https://www.encodeproject.org/files/ENCFF531NFE/@@download/ENCFF531NFE.bed.gz hg19 released antibody characterized with exemption ENCFF000RFA bam alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RFI 545208503 Richard Myers, HAIB 6a307ab92b4290c2a50292ca9e16fa93 https://www.encodeproject.org/files/ENCFF000RFA/@@download/ENCFF000RFA.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RFB bigBed broadPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UQR 1076001 Richard Myers, HAIB 0a69af9fcb026908f1363d8ad8847bd5 https://www.encodeproject.org/files/ENCFF000RFB/@@download/ENCFF000RFB.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RFC bigBed broadPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UQS 932575 Richard Myers, HAIB f5dbd7ad8c8a78255a695f70a95c15a2 https://www.encodeproject.org/files/ENCFF000RFC/@@download/ENCFF000RFC.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RFD bam alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RFO 570413779 Richard Myers, HAIB c971011011d8ddb981121f0afe1658b1 https://www.encodeproject.org/files/ENCFF000RFD/@@download/ENCFF000RFD.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RFE bigWig raw signal ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 1 21336204 Richard Myers, HAIB 4fd21d825507e89425cd28608414df8f https://www.encodeproject.org/files/ENCFF000RFE/@@download/ENCFF000RFE.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000RFH bigWig raw signal ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 1 31401197 Richard Myers, HAIB 0fdf1d46cebe1b2d014f0081b62d4968 https://www.encodeproject.org/files/ENCFF000RFH/@@download/ENCFF000RFH.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000RFI fastq reads ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 477150598 Richard Myers, HAIB a51b2dd55eb26f25764e03ede9670854 https://www.encodeproject.org/files/ENCFF000RFI/@@download/ENCFF000RFI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RGI/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000RFO fastq reads ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 591294560 Richard Myers, HAIB bdb4efdd36c2c5abd667bdd19e89d10e https://www.encodeproject.org/files/ENCFF000RFO/@@download/ENCFF000RFO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RGI/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UQR bed broadPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 1 594256 Richard Myers, HAIB 2e4986341eaeab2d9237ca1eea289761 https://www.encodeproject.org/files/ENCFF001UQR/@@download/ENCFF001UQR.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UQS bed broadPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 1 654885 Richard Myers, HAIB b2b40d0ee5940e010cf4292faba4aea8 https://www.encodeproject.org/files/ENCFF001UQS/@@download/ENCFF001UQS.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CNO bed narrowPeak optimal idr thresholded peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 780608 ENCODE Consortium Analysis Working Group cf7d9a863c4693af019267a204431d14 https://www.encodeproject.org/files/ENCFF002CNO/@@download/ENCFF002CNO.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF556IRN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE ENCFF002CNO 1461502 ENCODE Consortium 4ac91971d517d97296bd0b282f88644e https://www.encodeproject.org/files/ENCFF556IRN/@@download/ENCFF556IRN.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF453HFQ bam unfiltered alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RFI, ENCFF643CGH 633886580 ENCODE Processing Pipeline 9a015698b76497b8215a270ec9c6914b https://www.encodeproject.org/files/ENCFF453HFQ/@@download/ENCFF453HFQ.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF189GFZ bam alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RFI, ENCFF643CGH 379400371 ENCODE Processing Pipeline 2787f6be85345c16c2d45c639ccdf836 https://www.encodeproject.org/files/ENCFF189GFZ/@@download/ENCFF189GFZ.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF631KKX bam unfiltered alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RFO, ENCFF643CGH 686711631 ENCODE Processing Pipeline d089e2896bf89056388d949d706eb1df https://www.encodeproject.org/files/ENCFF631KKX/@@download/ENCFF631KKX.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF132NVE bam alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RFO, ENCFF643CGH 253457563 ENCODE Processing Pipeline 9de1e0419acb4bffd5d8848eb7b9fcb6 https://www.encodeproject.org/files/ENCFF132NVE/@@download/ENCFF132NVE.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF287RVF bam unfiltered alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RFO, ENCFF807MUK 685128741 ENCODE Processing Pipeline 8a66d01cdec31bbb249a34bbb2c2c575 https://www.encodeproject.org/files/ENCFF287RVF/@@download/ENCFF287RVF.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF373FVR bam alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RFO, ENCFF807MUK 253691770 ENCODE Processing Pipeline bfc55e59ce08850ccab0cbce95671c0a https://www.encodeproject.org/files/ENCFF373FVR/@@download/ENCFF373FVR.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF725NGA bam unfiltered alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RFI, ENCFF807MUK 631486544 ENCODE Processing Pipeline 7cf2d8792532fc4b1874783aa995722a https://www.encodeproject.org/files/ENCFF725NGA/@@download/ENCFF725NGA.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF587REM bam alignments ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RFI, ENCFF807MUK 379617138 ENCODE Processing Pipeline 1e14f4b7569d5f7ff9e8e32a089a588d https://www.encodeproject.org/files/ENCFF587REM/@@download/ENCFF587REM.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF707IED bigWig signal p-value ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF189GFZ 343520499 ENCODE Processing Pipeline 24113f2d2bc72470cb1e6f3218ac37ff https://www.encodeproject.org/files/ENCFF707IED/@@download/ENCFF707IED.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF529CFV bigWig signal p-value ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF132NVE 338558580 ENCODE Processing Pipeline ddc60598976fb15382b75462cd166d56 https://www.encodeproject.org/files/ENCFF529CFV/@@download/ENCFF529CFV.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF802JZV bigWig signal p-value ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF132NVE, ENCFF189GFZ 413787870 ENCODE Processing Pipeline 6995615bf29f60aeb4c4b0ec6ba6f2a5 https://www.encodeproject.org/files/ENCFF802JZV/@@download/ENCFF802JZV.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF017AIT bigWig fold change over control ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF189GFZ 204965919 ENCODE Processing Pipeline 4eaacb2bdc058be8b6c90a8d01ce8977 https://www.encodeproject.org/files/ENCFF017AIT/@@download/ENCFF017AIT.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF222GQG bigWig fold change over control ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF132NVE, ENCFF189GFZ 300030633 ENCODE Processing Pipeline e1dca6a5fff210a5e44717cf72c24f0e https://www.encodeproject.org/files/ENCFF222GQG/@@download/ENCFF222GQG.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF376YAU bigWig fold change over control ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF132NVE 125718259 ENCODE Processing Pipeline 49fbe04dcd7be0c69d30383dce5f2cd8 https://www.encodeproject.org/files/ENCFF376YAU/@@download/ENCFF376YAU.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF717PSS bed narrowPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF189GFZ 3429798 ENCODE Processing Pipeline 506c2818742779c12557a82fec797633 https://www.encodeproject.org/files/ENCFF717PSS/@@download/ENCFF717PSS.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF947HQT bigBed narrowPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF854RBH 8480677 ENCODE Processing Pipeline 38100224f9ef1506b87d234ca44cab1d https://www.encodeproject.org/files/ENCFF947HQT/@@download/ENCFF947HQT.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF640BUJ bed narrowPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF132NVE 2053513 ENCODE Processing Pipeline a71f669955b2ab923fa4115d5bb02ccc https://www.encodeproject.org/files/ENCFF640BUJ/@@download/ENCFF640BUJ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF845TRF bigBed narrowPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1 ENCFF717PSS 7189371 ENCODE Processing Pipeline 6c9101eba9b8cdeb247350fc9aad94dc https://www.encodeproject.org/files/ENCFF845TRF/@@download/ENCFF845TRF.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF693JLS bigBed narrowPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 2 ENCFF640BUJ 4436832 ENCODE Processing Pipeline 7117aed7c7f11ce2505e987a35aeab65 https://www.encodeproject.org/files/ENCFF693JLS/@@download/ENCFF693JLS.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF854RBH bed narrowPeak peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF132NVE, ENCFF189GFZ 4089402 ENCODE Processing Pipeline b90ebf51052e346bcbd0e70efd073826 https://www.encodeproject.org/files/ENCFF854RBH/@@download/ENCFF854RBH.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF049EUJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF049UCF 1005998 ENCODE Processing Pipeline 1e138cecf1fd445752c61ca10bcdc46a https://www.encodeproject.org/files/ENCFF049EUJ/@@download/ENCFF049EUJ.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF049UCF bed narrowPeak optimal idr thresholded peaks ENCSR000BLX ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens all-trans-retinoic acid CTCF-human ENCAB000AXU DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF640BUJ, ENCFF717PSS, ENCFF854RBH 662927 ENCODE Processing Pipeline dae984ed1ebfb1518c2a6a2eeab81fbf https://www.encodeproject.org/files/ENCFF049UCF/@@download/ENCFF049UCF.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NLJ bam alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NLT 1066275458 Richard Myers, HAIB d469e052b5b3778c4d19709cda96cc51 https://www.encodeproject.org/files/ENCFF000NLJ/@@download/ENCFF000NLJ.bam hg19 archived low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NLL bam alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NLU 628774735 Richard Myers, HAIB cfed278a69c3df62b76f731cf4f2582c https://www.encodeproject.org/files/ENCFF000NLL/@@download/ENCFF000NLL.bam hg19 archived low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NLM bigWig raw signal ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 1813133 Richard Myers, HAIB e5a2236f23e359e3a23b26a661536052 https://www.encodeproject.org/files/ENCFF000NLM/@@download/ENCFF000NLM.bigWig hg19 archived low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NLN bigWig raw signal ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 1144085 Richard Myers, HAIB 82113de3fc0e53e0d856fffbd318c0a5 https://www.encodeproject.org/files/ENCFF000NLN/@@download/ENCFF000NLN.bigWig hg19 archived low read length, mild to moderate bottlenecking, low read depth missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000NLT fastq reads ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 718991596 Richard Myers, HAIB 0137fec67e0fbf65a68f31328129409c https://www.encodeproject.org/files/ENCFF000NLT/@@download/ENCFF000NLT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NPN/ released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF000NLU fastq reads ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 690493524 Richard Myers, HAIB 997430ddf72a64d624f85d883442f88a https://www.encodeproject.org/files/ENCFF000NLU/@@download/ENCFF000NLU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NPN/ released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF514UIR bam unfiltered alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NLU, ENCFF643CGH 834393087 ENCODE Processing Pipeline 09e180465dfd98cbfb4fdc3339d06809 https://www.encodeproject.org/files/ENCFF514UIR/@@download/ENCFF514UIR.bam GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF703HXP bam alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NLT, ENCFF643CGH 530783851 ENCODE Processing Pipeline 2041b2806ad079726fc3c99b017ebbb1 https://www.encodeproject.org/files/ENCFF703HXP/@@download/ENCFF703HXP.bam GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF820TDD bam alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NLU, ENCFF643CGH 351530786 ENCODE Processing Pipeline d4e15fd35f394bfe77c3279eb9a06479 https://www.encodeproject.org/files/ENCFF820TDD/@@download/ENCFF820TDD.bam GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF893RWF bam unfiltered alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NLT, ENCFF643CGH 937001836 ENCODE Processing Pipeline 5243e370bd25b6f835f89afbedff31d4 https://www.encodeproject.org/files/ENCFF893RWF/@@download/ENCFF893RWF.bam GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF462RUD bam unfiltered alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NLU, ENCFF807MUK 832056099 ENCODE Processing Pipeline b953d1fcf8e4889e36317ac3a59fe8ab https://www.encodeproject.org/files/ENCFF462RUD/@@download/ENCFF462RUD.bam hg19 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF902HRT bam alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NLU, ENCFF807MUK 351750846 ENCODE Processing Pipeline 88c6db8a1daef2c61d7a78bfef5560ea https://www.encodeproject.org/files/ENCFF902HRT/@@download/ENCFF902HRT.bam hg19 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF277EKP bam alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NLT, ENCFF807MUK 531120311 ENCODE Processing Pipeline f53f136d47c087f6898016ec8d67b6d0 https://www.encodeproject.org/files/ENCFF277EKP/@@download/ENCFF277EKP.bam hg19 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF972IRG bam unfiltered alignments ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NLT, ENCFF807MUK 934460432 ENCODE Processing Pipeline 8fc62a3c2df0e1a59e0d741e7bd5f070 https://www.encodeproject.org/files/ENCFF972IRG/@@download/ENCFF972IRG.bam hg19 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF432BTN bigWig signal p-value ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF820TDD 446033178 ENCODE Processing Pipeline 629d94c94f31cfeece0729ef38d8ecdb https://www.encodeproject.org/files/ENCFF432BTN/@@download/ENCFF432BTN.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF395NHS bigWig signal p-value ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF703HXP 441031563 ENCODE Processing Pipeline f1246581583c31669f09d43c0e7d682d https://www.encodeproject.org/files/ENCFF395NHS/@@download/ENCFF395NHS.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF500TQY bigWig signal p-value ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF703HXP, ENCFF820TDD 475581872 ENCODE Processing Pipeline 54dec99915f3bfd0cc9e0c92228e9c31 https://www.encodeproject.org/files/ENCFF500TQY/@@download/ENCFF500TQY.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF046LQU bigWig fold change over control ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF703HXP 272366239 ENCODE Processing Pipeline 7226bbfc789e03d158df5ea9c78ebb98 https://www.encodeproject.org/files/ENCFF046LQU/@@download/ENCFF046LQU.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF752HOL bigWig fold change over control ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF820TDD 213084991 ENCODE Processing Pipeline 8a3a89edccfccc65487069d66b9be56d https://www.encodeproject.org/files/ENCFF752HOL/@@download/ENCFF752HOL.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF276BZU bed narrowPeak peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF703HXP, ENCFF820TDD 4329459 ENCODE Processing Pipeline e5f2ab61f20985979570f60030dbe001 https://www.encodeproject.org/files/ENCFF276BZU/@@download/ENCFF276BZU.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF003UEE bigBed narrowPeak peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF722YAE 10373602 ENCODE Processing Pipeline 1446aac137aff68d5c90be84c59aaa52 https://www.encodeproject.org/files/ENCFF003UEE/@@download/ENCFF003UEE.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF529FSR bigBed narrowPeak peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF861ABB 5671964 ENCODE Processing Pipeline b01883e70c97962174ab8589cb33a17a https://www.encodeproject.org/files/ENCFF529FSR/@@download/ENCFF529FSR.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF185QLG bigWig fold change over control ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF703HXP, ENCFF820TDD 432116550 ENCODE Processing Pipeline 0c1410f89d41f62855226c88fd1cb1ff https://www.encodeproject.org/files/ENCFF185QLG/@@download/ENCFF185QLG.bigWig GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF722YAE bed narrowPeak peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF703HXP 4061134 ENCODE Processing Pipeline b28aa34f71dc982d0dceaada0574acc3 https://www.encodeproject.org/files/ENCFF722YAE/@@download/ENCFF722YAE.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF861ABB bed narrowPeak peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF820TDD 2571941 ENCODE Processing Pipeline df7ce360fae079fd66531b26ee98490e https://www.encodeproject.org/files/ENCFF861ABB/@@download/ENCFF861ABB.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF584BGR bigBed narrowPeak peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF276BZU 10871381 ENCODE Processing Pipeline b8072652eaaae38dca93d4369456c934 https://www.encodeproject.org/files/ENCFF584BGR/@@download/ENCFF584BGR.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF795JAX bed narrowPeak conservative idr thresholded peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF276BZU, ENCFF419RSJ, ENCFF722YAE, ENCFF861ABB 42895 ENCODE Processing Pipeline f67d2f1185a0a5766fb0cd3b3f0b992f https://www.encodeproject.org/files/ENCFF795JAX/@@download/ENCFF795JAX.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF377PDM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF279JGE 126329 ENCODE Processing Pipeline 1370428973f481b707a35226f7b4fa09 https://www.encodeproject.org/files/ENCFF377PDM/@@download/ENCFF377PDM.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF938WCC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF795JAX 116825 ENCODE Processing Pipeline cb614d03032d2baa5764ce591d44f7f3 https://www.encodeproject.org/files/ENCFF938WCC/@@download/ENCFF938WCC.bigBed GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF279JGE bed narrowPeak optimal idr thresholded peaks ENCSR000BIZ ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide ESR1-human ENCAB000AGD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF276BZU, ENCFF419RSJ, ENCFF722YAE, ENCFF861ABB 50002 ENCODE Processing Pipeline 8e8e993a0706c36d4e02ab2aa83aaebe https://www.encodeproject.org/files/ENCFF279JGE/@@download/ENCFF279JGE.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, low read depth biological replicates with identical biosample insufficient read depth ENCFF813TPE fastq reads ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 1 50 single-ended 2113308495 Richard Myers, HAIB 085c2a038aa14feaabab8c2360c7714b SRA:SRR5331242 https://www.encodeproject.org/files/ENCFF813TPE/@@download/ENCFF813TPE.fastq.gz HiSeq 2000 /files/ENCFF876NBT/ released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF822SMI fastq reads ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 1 50 single-ended 1146312288 Richard Myers, HAIB f111b2f5de096300ab317f32b00793bc SRA:SRR5331243 https://www.encodeproject.org/files/ENCFF822SMI/@@download/ENCFF822SMI.fastq.gz HiSeq 2000 /files/ENCFF002BFY/ released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF698VEP bam alignments ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 50 ENCFF807MUK, ENCFF822SMI 928744047 ENCODE Processing Pipeline d4b51f76e092833c44156063a67f22c0 https://www.encodeproject.org/files/ENCFF698VEP/@@download/ENCFF698VEP.bam hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF437NVC bam alignments ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 50 ENCFF807MUK, ENCFF813TPE 1624435735 ENCODE Processing Pipeline d8bda1b8a8939167693b4b115a3e3da7 https://www.encodeproject.org/files/ENCFF437NVC/@@download/ENCFF437NVC.bam hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF319RKO bigWig signal p-value ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 ENCFF356JMK, ENCFF437NVC, ENCFF994YBV 959209736 ENCODE Processing Pipeline d33686747ccad9fa7ff426a397c9b6b3 https://www.encodeproject.org/files/ENCFF319RKO/@@download/ENCFF319RKO.bigWig hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF804GWV bigWig signal p-value ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 ENCFF356JMK, ENCFF698VEP, ENCFF994YBV 933651207 ENCODE Processing Pipeline b58182df536b90bd4bb7999e32779422 https://www.encodeproject.org/files/ENCFF804GWV/@@download/ENCFF804GWV.bigWig hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF782QBR bigWig fold change over control ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 ENCFF356JMK, ENCFF698VEP, ENCFF994YBV 602371076 ENCODE Processing Pipeline 383425c742766e1c11fea51f7cffceb1 https://www.encodeproject.org/files/ENCFF782QBR/@@download/ENCFF782QBR.bigWig hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF387HGD bigWig signal p-value ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF356JMK, ENCFF437NVC, ENCFF698VEP, ENCFF994YBV 1024005971 ENCODE Processing Pipeline 1ec482cc072a56c8a034ade8f38ccc0e https://www.encodeproject.org/files/ENCFF387HGD/@@download/ENCFF387HGD.bigWig hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF250NWE bigWig fold change over control ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 ENCFF356JMK, ENCFF437NVC, ENCFF994YBV 867107176 ENCODE Processing Pipeline fcd66ce4d32fcbac886a497afd9ddfc7 https://www.encodeproject.org/files/ENCFF250NWE/@@download/ENCFF250NWE.bigWig hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF422FDS bigWig fold change over control ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF356JMK, ENCFF437NVC, ENCFF698VEP, ENCFF994YBV 1167458422 ENCODE Processing Pipeline 851505e0ef1ea128b19a021d45aad8f8 https://www.encodeproject.org/files/ENCFF422FDS/@@download/ENCFF422FDS.bigWig hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF296FGF bed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 ENCFF356JMK, ENCFF698VEP, ENCFF994YBV 5653285 ENCODE Processing Pipeline 3764a7b42bc983547974deeed1fa2371 https://www.encodeproject.org/files/ENCFF296FGF/@@download/ENCFF296FGF.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF175OWR bed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 ENCFF356JMK, ENCFF437NVC, ENCFF994YBV 6452225 ENCODE Processing Pipeline 3d953209576895e0d22ecd9a876406a0 https://www.encodeproject.org/files/ENCFF175OWR/@@download/ENCFF175OWR.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF223TUK bigBed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 ENCFF296FGF 11396832 ENCODE Processing Pipeline f7e4acf4ef9cf7c07034ba4f97ed9ad6 https://www.encodeproject.org/files/ENCFF223TUK/@@download/ENCFF223TUK.bigBed hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF403CMY bed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF356JMK, ENCFF437NVC, ENCFF698VEP, ENCFF994YBV 6802429 ENCODE Processing Pipeline 12d87506200180c4ed22dbdb2e6b1967 https://www.encodeproject.org/files/ENCFF403CMY/@@download/ENCFF403CMY.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF393PZE bigBed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 ENCFF175OWR 13520780 ENCODE Processing Pipeline 28483f1687af66e41560b5a428587302 https://www.encodeproject.org/files/ENCFF393PZE/@@download/ENCFF393PZE.bigBed hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF442GKE bigBed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF403CMY 13621503 ENCODE Processing Pipeline 6b96ae544eb75b886a6a9a40959c0b6e https://www.encodeproject.org/files/ENCFF442GKE/@@download/ENCFF442GKE.bigBed hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF884PQP bam unfiltered alignments ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 50 ENCFF643CGH, ENCFF822SMI 1226947315 ENCODE Processing Pipeline c63ac8d6f6378587723a4fe149c34de8 https://www.encodeproject.org/files/ENCFF884PQP/@@download/ENCFF884PQP.bam GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF257FVX bam unfiltered alignments ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 50 ENCFF643CGH, ENCFF813TPE 2222391471 ENCODE Processing Pipeline 0b625a7acdd8d2d7db850cbf74d96504 https://www.encodeproject.org/files/ENCFF257FVX/@@download/ENCFF257FVX.bam GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF319BJC bam alignments ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 50 ENCFF643CGH, ENCFF822SMI 928585355 ENCODE Processing Pipeline 0593b9b4a4d419f0b9baaa4d2985698b https://www.encodeproject.org/files/ENCFF319BJC/@@download/ENCFF319BJC.bam GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF340QRX bam alignments ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 50 ENCFF643CGH, ENCFF813TPE 1624077843 ENCODE Processing Pipeline 13f49284e055ce3cde8e53017028b6ee https://www.encodeproject.org/files/ENCFF340QRX/@@download/ENCFF340QRX.bam GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF039BZT bigWig signal p-value ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 ENCFF103VPA, ENCFF340QRX, ENCFF894EOG 928084875 ENCODE Processing Pipeline 45a1af7e23aac765f1d4885525ee93d8 https://www.encodeproject.org/files/ENCFF039BZT/@@download/ENCFF039BZT.bigWig GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF279SVE bigWig signal p-value ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 ENCFF103VPA, ENCFF319BJC, ENCFF894EOG 904722595 ENCODE Processing Pipeline f1f7b01f0a1bcceb5428d52d737f6891 https://www.encodeproject.org/files/ENCFF279SVE/@@download/ENCFF279SVE.bigWig GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF924SII bigWig signal p-value ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF103VPA, ENCFF319BJC, ENCFF340QRX, ENCFF894EOG 1190712365 ENCODE Processing Pipeline f10561b78169011b474850fa52022140 https://www.encodeproject.org/files/ENCFF924SII/@@download/ENCFF924SII.bigWig GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF710MWZ bigWig fold change over control ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 ENCFF103VPA, ENCFF340QRX, ENCFF894EOG 853183899 ENCODE Processing Pipeline b7c59df4b07b50c75474de8770cf1a2b https://www.encodeproject.org/files/ENCFF710MWZ/@@download/ENCFF710MWZ.bigWig GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF491ODT bigWig fold change over control ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 ENCFF103VPA, ENCFF319BJC, ENCFF894EOG 612247424 ENCODE Processing Pipeline 152db05ea4308351829212b547070598 https://www.encodeproject.org/files/ENCFF491ODT/@@download/ENCFF491ODT.bigWig GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF752PDZ bigWig fold change over control ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF103VPA, ENCFF319BJC, ENCFF340QRX, ENCFF894EOG 1120475110 ENCODE Processing Pipeline 945bd11978e6604146ac52e9326c4e7d https://www.encodeproject.org/files/ENCFF752PDZ/@@download/ENCFF752PDZ.bigWig GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF809PHA bed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 ENCFF103VPA, ENCFF340QRX, ENCFF894EOG 6296765 ENCODE Processing Pipeline ecf6373e8af40d2644cd1e893d759529 https://www.encodeproject.org/files/ENCFF809PHA/@@download/ENCFF809PHA.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF378UNO bed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF103VPA, ENCFF319BJC, ENCFF340QRX, ENCFF894EOG 6670160 ENCODE Processing Pipeline ffa6b4f7c7ecc094916c33d6613b5c5c https://www.encodeproject.org/files/ENCFF378UNO/@@download/ENCFF378UNO.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF842VCH bigBed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1 ENCFF809PHA 13523128 ENCODE Processing Pipeline c665b5f7ddcb92d58105e398e2cf2913 https://www.encodeproject.org/files/ENCFF842VCH/@@download/ENCFF842VCH.bigBed GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF447HAK bigBed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF378UNO 13605863 ENCODE Processing Pipeline 96a4ff5c2876cf93aef659c3b05af1ff https://www.encodeproject.org/files/ENCFF447HAK/@@download/ENCFF447HAK.bigBed GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF159RMJ bed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 ENCFF103VPA, ENCFF319BJC, ENCFF894EOG 5451027 ENCODE Processing Pipeline df508a014628571e20fc743555a95e9d https://www.encodeproject.org/files/ENCFF159RMJ/@@download/ENCFF159RMJ.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF437WFB bigBed narrowPeak peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 2 ENCFF159RMJ 11334315 ENCODE Processing Pipeline 9d66dd0d440d9cdfa1d8e1da24994f71 https://www.encodeproject.org/files/ENCFF437WFB/@@download/ENCFF437WFB.bigBed GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF967ZYC bigBed narrowPeak optimal idr thresholded peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF912SQI 1036343 ENCODE Processing Pipeline e118bc14050e035ccffc246fcaf3825e https://www.encodeproject.org/files/ENCFF967ZYC/@@download/ENCFF967ZYC.bigBed GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF912SQI bed narrowPeak optimal idr thresholded peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF159RMJ, ENCFF378UNO, ENCFF419RSJ, ENCFF809PHA 502931 ENCODE Processing Pipeline 739a70dcbee45b647ec35975de8cfec9 https://www.encodeproject.org/files/ENCFF912SQI/@@download/ENCFF912SQI.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF696VDG bed narrowPeak conservative idr thresholded peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF159RMJ, ENCFF378UNO, ENCFF419RSJ, ENCFF809PHA 268496 ENCODE Processing Pipeline 7678dfc2d6593798172b9dda144f4f88 https://www.encodeproject.org/files/ENCFF696VDG/@@download/ENCFF696VDG.bed.gz GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF454PKG bigBed narrowPeak conservative idr thresholded peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF696VDG 534635 ENCODE Processing Pipeline 256e11c1761ee7422fb84ca28bacf955 https://www.encodeproject.org/files/ENCFF454PKG/@@download/ENCFF454PKG.bigBed GRCh38 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF890OUL bed narrowPeak conservative idr thresholded peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF001TDO, ENCFF175OWR, ENCFF296FGF, ENCFF403CMY 247962 ENCODE Processing Pipeline 384face4ca066bea89388f6015807f8d https://www.encodeproject.org/files/ENCFF890OUL/@@download/ENCFF890OUL.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF250MEG bigBed narrowPeak optimal idr thresholded peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF184XYF 754786 ENCODE Processing Pipeline cdea7f5c2e72ca3803edb96f48bbfb57 https://www.encodeproject.org/files/ENCFF250MEG/@@download/ENCFF250MEG.bigBed hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF848DOK bigBed narrowPeak conservative idr thresholded peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF890OUL 505473 ENCODE Processing Pipeline 1978e6391a0cd41246fdde27b1ebcd3d https://www.encodeproject.org/files/ENCFF848DOK/@@download/ENCFF848DOK.bigBed hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF184XYF bed narrowPeak optimal idr thresholded peaks ENCSR103SZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens TFAP4-human ENCAB000BJE DNA False 2016-03-11 ENCODE 1, 2 ENCFF001TDO, ENCFF175OWR, ENCFF296FGF, ENCFF403CMY 446347 ENCODE Processing Pipeline 7667cee2f761f2918dac39d02674348a https://www.encodeproject.org/files/ENCFF184XYF/@@download/ENCFF184XYF.bed.gz hg19 released borderline replicate concordance, low read depth missing unfiltered alignments ENCFF000QDB bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QDG 406591215 Richard Myers, HAIB fd68648bfc10e5e7976b8e9320f14f99 https://www.encodeproject.org/files/ENCFF000QDB/@@download/ENCFF000QDB.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QDC bigBed broadPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKR 765350 Richard Myers, HAIB c6ebe6c7f3d67a883aeefda5fa5592c9 https://www.encodeproject.org/files/ENCFF000QDC/@@download/ENCFF000QDC.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QDD bigBed broadPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKS 1571305 Richard Myers, HAIB cbe387b47a279595cc6dd90a2b203ab8 https://www.encodeproject.org/files/ENCFF000QDD/@@download/ENCFF000QDD.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QDE bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QDO 926428519 Richard Myers, HAIB bf42dd13eba357c4a8ff7b6171f6b2c5 https://www.encodeproject.org/files/ENCFF000QDE/@@download/ENCFF000QDE.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QDF bigWig raw signal ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 14938909 Richard Myers, HAIB c0b26908dffb93eedc42bd8086443f29 https://www.encodeproject.org/files/ENCFF000QDF/@@download/ENCFF000QDF.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QDG fastq reads ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 365214444 Richard Myers, HAIB aaf7bfdbfa35a23d8c48faccdc515c47 https://www.encodeproject.org/files/ENCFF000QDG/@@download/ENCFF000QDG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QDI bigWig raw signal ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 56783068 Richard Myers, HAIB d0b176322b5ce42abebaebd746ee4c19 https://www.encodeproject.org/files/ENCFF000QDI/@@download/ENCFF000QDI.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000QDO fastq reads ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 955304762 Richard Myers, HAIB 8df2042bfdd206b201df3baafe25c775 https://www.encodeproject.org/files/ENCFF000QDO/@@download/ENCFF000QDO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001UKR bed broadPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 413957 Richard Myers, HAIB 8b0e92f2c22e3a57cd52c99ea7405de8 https://www.encodeproject.org/files/ENCFF001UKR/@@download/ENCFF001UKR.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF001UKS bed broadPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 795112 Richard Myers, HAIB 9ef9969ecd0c72beb4ca583b9935b0fd https://www.encodeproject.org/files/ENCFF001UKS/@@download/ENCFF001UKS.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF002CMH bed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 482481 ENCODE Consortium Analysis Working Group 30682bdafd5195e37a07eb7a47a18ebf https://www.encodeproject.org/files/ENCFF002CMH/@@download/ENCFF002CMH.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient read depth ENCFF164YQT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE ENCFF002CMH 1241214 ENCODE Consortium 048dbe48c0e4ca1b2d09fda1d959848d https://www.encodeproject.org/files/ENCFF164YQT/@@download/ENCFF164YQT.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF037VJL bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDG, ENCFF643CGH 293759242 ENCODE Processing Pipeline f6a219a3686a139e28762c3b277d8345 https://www.encodeproject.org/files/ENCFF037VJL/@@download/ENCFF037VJL.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF044YYE bam unfiltered alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDG, ENCFF643CGH 489871620 ENCODE Processing Pipeline c8ae90daeae7c7ed0a10bb183a06b6cf https://www.encodeproject.org/files/ENCFF044YYE/@@download/ENCFF044YYE.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF277YIL bam unfiltered alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDO, ENCFF643CGH 1167573131 ENCODE Processing Pipeline b5d0e54fc1387f22ca72d2af95184ea1 https://www.encodeproject.org/files/ENCFF277YIL/@@download/ENCFF277YIL.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF115UJX bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDO, ENCFF643CGH 607400278 ENCODE Processing Pipeline c3d44d2089ef1139c1a9bd4f977a02d7 https://www.encodeproject.org/files/ENCFF115UJX/@@download/ENCFF115UJX.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF029OAZ bam unfiltered alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDG, ENCFF807MUK 489526992 ENCODE Processing Pipeline a4761a7de106a85cb6809d4a38ca90de https://www.encodeproject.org/files/ENCFF029OAZ/@@download/ENCFF029OAZ.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF788MNU bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDG, ENCFF807MUK 293979846 ENCODE Processing Pipeline cc8f5b992246f4e23fa74411c7ca3a91 https://www.encodeproject.org/files/ENCFF788MNU/@@download/ENCFF788MNU.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF669ELS bam unfiltered alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDO, ENCFF807MUK 1167290114 ENCODE Processing Pipeline 06bc905c926bf139857835d4e3ace360 https://www.encodeproject.org/files/ENCFF669ELS/@@download/ENCFF669ELS.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF196OAS bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDO, ENCFF807MUK 607852691 ENCODE Processing Pipeline a58e9b6256175d512f082988b093d258 https://www.encodeproject.org/files/ENCFF196OAS/@@download/ENCFF196OAS.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF496ODB bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF196OAS, ENCFF750MIM 214694035 ENCODE Processing Pipeline 7f4de1854144ebcf5dbaca504f17a7cd https://www.encodeproject.org/files/ENCFF496ODB/@@download/ENCFF496ODB.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF827GEM bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF196OAS, ENCFF750MIM, ENCFF788MNU 302196059 ENCODE Processing Pipeline f159f4b8d478abd7ff8b6a3a8120774b https://www.encodeproject.org/files/ENCFF827GEM/@@download/ENCFF827GEM.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF519QQX bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF788MNU 5120602 ENCODE Processing Pipeline 85d929ad32fc06df986203b6fc53cdcf https://www.encodeproject.org/files/ENCFF519QQX/@@download/ENCFF519QQX.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF065RJC bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF196OAS, ENCFF750MIM, ENCFF788MNU 6501159 ENCODE Processing Pipeline 07a3dff1a8001a9b8ba175f7a041e0dc https://www.encodeproject.org/files/ENCFF065RJC/@@download/ENCFF065RJC.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF707AWX bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037VJL, ENCFF115UJX, ENCFF772PJM 6498050 ENCODE Processing Pipeline 6ed3b2d7c302f43f0e7918437b74c60a https://www.encodeproject.org/files/ENCFF707AWX/@@download/ENCFF707AWX.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF561TMA bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF510TJQ 11916977 ENCODE Processing Pipeline b614c8320a341cc60d2725238baf6d71 https://www.encodeproject.org/files/ENCFF561TMA/@@download/ENCFF561TMA.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF824ANA bed narrowPeak conservative idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF368BII, ENCFF419RSJ, ENCFF510TJQ, ENCFF707AWX 417093 ENCODE Processing Pipeline 493eff3c7299ad713724ce46b793612a https://www.encodeproject.org/files/ENCFF824ANA/@@download/ENCFF824ANA.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF134HVN bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF065RJC 12019084 ENCODE Processing Pipeline 96e6bb9de83b802950f57ae45681f11e https://www.encodeproject.org/files/ENCFF134HVN/@@download/ENCFF134HVN.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF845FTJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF879HIG 861524 ENCODE Processing Pipeline 3ee0bc465b7c99c1de48935ad0896ebd https://www.encodeproject.org/files/ENCFF845FTJ/@@download/ENCFF845FTJ.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF542DOG bed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF065RJC, ENCFF306TSB, ENCFF519QQX 498177 ENCODE Processing Pipeline 0598e742722b3d8250df0367c201924d https://www.encodeproject.org/files/ENCFF542DOG/@@download/ENCFF542DOG.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF338AQL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF542DOG 969945 ENCODE Processing Pipeline 5993a8c3ed103b82ac8ed07fdc7ae0d4 https://www.encodeproject.org/files/ENCFF338AQL/@@download/ENCFF338AQL.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF811SWR bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037VJL, ENCFF115UJX, ENCFF772PJM 304892865 ENCODE Processing Pipeline 91a28efe5340f1eb0ba84073b94190ab https://www.encodeproject.org/files/ENCFF811SWR/@@download/ENCFF811SWR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF368BII bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037VJL, ENCFF772PJM 5119095 ENCODE Processing Pipeline dfdbbc6375db04b652c160e5eeeba32c https://www.encodeproject.org/files/ENCFF368BII/@@download/ENCFF368BII.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF732ZXO bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF788MNU 183249114 ENCODE Processing Pipeline 7c9499f39869e617d4d7a9f270067e45 https://www.encodeproject.org/files/ENCFF732ZXO/@@download/ENCFF732ZXO.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF036KTV bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF788MNU 125381747 ENCODE Processing Pipeline 969cb8453fc37084b71b3ad2f7fd3cc0 https://www.encodeproject.org/files/ENCFF036KTV/@@download/ENCFF036KTV.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF210ADZ bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF196OAS, ENCFF750MIM, ENCFF788MNU 209300612 ENCODE Processing Pipeline ef6eeb698e4ebefbc8e5a600aebe688d https://www.encodeproject.org/files/ENCFF210ADZ/@@download/ENCFF210ADZ.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF750ONR bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF196OAS, ENCFF750MIM 215333029 ENCODE Processing Pipeline 557340e23649cee4f0be486d415b9771 https://www.encodeproject.org/files/ENCFF750ONR/@@download/ENCFF750ONR.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF306TSB bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF196OAS, ENCFF750MIM 6039123 ENCODE Processing Pipeline c11321251b025b40027c6c8665b8ea7a https://www.encodeproject.org/files/ENCFF306TSB/@@download/ENCFF306TSB.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF281WLZ bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF519QQX 11875647 ENCODE Processing Pipeline efd14dba352095b1f9aef7ff2dd083f1 https://www.encodeproject.org/files/ENCFF281WLZ/@@download/ENCFF281WLZ.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF785FHN bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF306TSB 11912509 ENCODE Processing Pipeline c3b1d5f172be4f32ae13bffb75272380 https://www.encodeproject.org/files/ENCFF785FHN/@@download/ENCFF785FHN.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF879HIG bed narrowPeak conservative idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF065RJC, ENCFF306TSB, ENCFF519QQX 417747 ENCODE Processing Pipeline 182719848aa8f72e325f493bcb864739 https://www.encodeproject.org/files/ENCFF879HIG/@@download/ENCFF879HIG.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF993MRG bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF115UJX, ENCFF772PJM 214634304 ENCODE Processing Pipeline a2bb86cfb810cb890fe355f95dda0937 https://www.encodeproject.org/files/ENCFF993MRG/@@download/ENCFF993MRG.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF866NHX bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037VJL, ENCFF115UJX, ENCFF772PJM 209395872 ENCODE Processing Pipeline 34aac58b0e3ae1012447ae49586b6dd6 https://www.encodeproject.org/files/ENCFF866NHX/@@download/ENCFF866NHX.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF613IKP bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF115UJX, ENCFF772PJM 218387001 ENCODE Processing Pipeline 3a5fe372180f4a3605030653fd405afb https://www.encodeproject.org/files/ENCFF613IKP/@@download/ENCFF613IKP.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF220XDU bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF368BII 11883435 ENCODE Processing Pipeline 907b6ce11132dc69fb5345efb88c0926 https://www.encodeproject.org/files/ENCFF220XDU/@@download/ENCFF220XDU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF122XDI bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF707AWX 12023578 ENCODE Processing Pipeline d82df5f9cb808dfbc34bb8a0ef0d567c https://www.encodeproject.org/files/ENCFF122XDI/@@download/ENCFF122XDI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF881JQV bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF824ANA 862141 ENCODE Processing Pipeline 34d376c049496ed33de6d9a4345dce63 https://www.encodeproject.org/files/ENCFF881JQV/@@download/ENCFF881JQV.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF839TWP bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037VJL, ENCFF772PJM 215453521 ENCODE Processing Pipeline a9312c31985243ad27fefa18127324e7 https://www.encodeproject.org/files/ENCFF839TWP/@@download/ENCFF839TWP.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF510TJQ bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF115UJX, ENCFF772PJM 6038249 ENCODE Processing Pipeline 4ddf4e319a19a86a6139dd0a79ba50d3 https://www.encodeproject.org/files/ENCFF510TJQ/@@download/ENCFF510TJQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF404FQO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF053XYZ 967810 ENCODE Processing Pipeline 90cb53e2887d69e7ce16c243dfcc80e6 https://www.encodeproject.org/files/ENCFF404FQO/@@download/ENCFF404FQO.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF367EEF bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037VJL, ENCFF772PJM 125118119 ENCODE Processing Pipeline 0e640be6367b904cb1ed52153d0fc50b https://www.encodeproject.org/files/ENCFF367EEF/@@download/ENCFF367EEF.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF053XYZ bed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF368BII, ENCFF419RSJ, ENCFF510TJQ, ENCFF707AWX 496748 ENCODE Processing Pipeline ca96abffe1596788d7d0f471d41f959c https://www.encodeproject.org/files/ENCFF053XYZ/@@download/ENCFF053XYZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient read depth ENCFF000OAG bam alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OAU 1396552795 Richard Myers, HAIB 7427cc5d553e4514fb412670700960c3 https://www.encodeproject.org/files/ENCFF000OAG/@@download/ENCFF000OAG.bam hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OAH bigBed broadPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TYG 1448370 Richard Myers, HAIB d8120567e21bea58deab0fd3836a54fc https://www.encodeproject.org/files/ENCFF000OAH/@@download/ENCFF000OAH.bigBed hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OAI bigBed broadPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TYH 1539375 Richard Myers, HAIB 368b4fe8a494650423c14d20304df661 https://www.encodeproject.org/files/ENCFF000OAI/@@download/ENCFF000OAI.bigBed hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OAJ bam alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OAS 1232286491 Richard Myers, HAIB 3208440aa5ec3cb3a3723533ed339914 https://www.encodeproject.org/files/ENCFF000OAJ/@@download/ENCFF000OAJ.bam hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OAK bigWig raw signal ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 88252715 Richard Myers, HAIB 7fef1abc369efd946063747752ef0a9b https://www.encodeproject.org/files/ENCFF000OAK/@@download/ENCFF000OAK.bigWig hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OAM bigWig raw signal ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 583770527 Richard Myers, HAIB fc201ca115694d70e450f2217b4a936d https://www.encodeproject.org/files/ENCFF000OAM/@@download/ENCFF000OAM.bigWig hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OAS fastq reads ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1496921410 Richard Myers, HAIB 8ac33e07431d08cbb560fea3bcfaee44 https://www.encodeproject.org/files/ENCFF000OAS/@@download/ENCFF000OAS.fastq.gz HiSeq 2000 /files/ENCFF000OCW/ released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OAU fastq reads ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1598915798 Richard Myers, HAIB 285f24737a7accbd192cb276899c4969 https://www.encodeproject.org/files/ENCFF000OAU/@@download/ENCFF000OAU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TYG bed broadPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 807334 Richard Myers, HAIB 917a90c75abd7b757b65a7c76f6a641e https://www.encodeproject.org/files/ENCFF001TYG/@@download/ENCFF001TYG.bed.gz hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TYH bed broadPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 926615 Richard Myers, HAIB 4d9cc98721dd68ccf988d8e7db1bf4e5 https://www.encodeproject.org/files/ENCFF001TYH/@@download/ENCFF001TYH.bed.gz hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CHN bed narrowPeak optimal idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 412959 ENCODE Consortium Analysis Working Group a185d09c2f76fcf0396be3b27be0fb25 https://www.encodeproject.org/files/ENCFF002CHN/@@download/ENCFF002CHN.bed.gz hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF616AHY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE ENCFF002CHN 1081452 ENCODE Consortium 784b519f52a5d61df963051d40aa1182 https://www.encodeproject.org/files/ENCFF616AHY/@@download/ENCFF616AHY.bigBed hg19 archived inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF996YTS bam unfiltered alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OAU, ENCFF643CGH 1929967547 ENCODE Processing Pipeline 791e41c1729d4f7c7bd54638c414dbc9 https://www.encodeproject.org/files/ENCFF996YTS/@@download/ENCFF996YTS.bam GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF349ZII bam unfiltered alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OAS, ENCFF643CGH 1789876447 ENCODE Processing Pipeline b55dbd577f36e6b9fa41cd211b512839 https://www.encodeproject.org/files/ENCFF349ZII/@@download/ENCFF349ZII.bam GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF579AOQ bam alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OAU, ENCFF643CGH 955422465 ENCODE Processing Pipeline ba49402cd62db9c5ef7e9817cc391de9 https://www.encodeproject.org/files/ENCFF579AOQ/@@download/ENCFF579AOQ.bam GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF584LIV bam alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OAS, ENCFF643CGH 942187642 ENCODE Processing Pipeline 6c6f4d65435d3840c12d130381f54c91 https://www.encodeproject.org/files/ENCFF584LIV/@@download/ENCFF584LIV.bam GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF339TGE bam alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OAU, ENCFF807MUK 951926495 ENCODE Processing Pipeline 4a3398b99803861b9dabbc1b57c6c795 https://www.encodeproject.org/files/ENCFF339TGE/@@download/ENCFF339TGE.bam hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF522HMN bam unfiltered alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OAS, ENCFF807MUK 1788740029 ENCODE Processing Pipeline d29a7036cef7da4fb7c3a528c50eece6 https://www.encodeproject.org/files/ENCFF522HMN/@@download/ENCFF522HMN.bam hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF111JMU bam unfiltered alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OAU, ENCFF807MUK 1927701746 ENCODE Processing Pipeline 0f18305c0ffc17c9598042c649c7bbb3 https://www.encodeproject.org/files/ENCFF111JMU/@@download/ENCFF111JMU.bam hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF042GNN bam alignments ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OAS, ENCFF807MUK 938094989 ENCODE Processing Pipeline c57dfe52fdfa745298698489b5532805 https://www.encodeproject.org/files/ENCFF042GNN/@@download/ENCFF042GNN.bam hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF058KOQ bigWig signal p-value ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562HPN, ENCFF584LIV 506540915 ENCODE Processing Pipeline aebfd6541faa18670901d8e22e9bd2f9 https://www.encodeproject.org/files/ENCFF058KOQ/@@download/ENCFF058KOQ.bigWig GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF248EKV bigWig signal p-value ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF438FFV, ENCFF579AOQ 528583053 ENCODE Processing Pipeline ab4f601a16683f38675ce03404be212c https://www.encodeproject.org/files/ENCFF248EKV/@@download/ENCFF248EKV.bigWig GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF280SAT bigWig signal p-value ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF579AOQ, ENCFF584LIV 779851913 ENCODE Processing Pipeline b11d51300fb225a149ea06b104111cb2 https://www.encodeproject.org/files/ENCFF280SAT/@@download/ENCFF280SAT.bigWig GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF553AQC bigWig fold change over control ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF438FFV, ENCFF579AOQ 337766015 ENCODE Processing Pipeline 1ed5ba16e2520a4fc3cf69052ed58e17 https://www.encodeproject.org/files/ENCFF553AQC/@@download/ENCFF553AQC.bigWig GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF610QKW bed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562HPN, ENCFF584LIV 6621470 ENCODE Processing Pipeline 5a5dfd9b42af8a50e9f28158631f4b89 https://www.encodeproject.org/files/ENCFF610QKW/@@download/ENCFF610QKW.bed.gz GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF543JFC bigBed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF610QKW 11249865 ENCODE Processing Pipeline 7a97c9d3bdab630922ad305db249ad67 https://www.encodeproject.org/files/ENCFF543JFC/@@download/ENCFF543JFC.bigBed GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF126PLE bigBed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF717BRE 10825900 ENCODE Processing Pipeline aff033656781d2b2f3276a744692a689 https://www.encodeproject.org/files/ENCFF126PLE/@@download/ENCFF126PLE.bigBed GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF835YRM bed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF438FFV, ENCFF579AOQ 7161694 ENCODE Processing Pipeline 4d1c8e55a81b4e7fc52c4b57e819fb44 https://www.encodeproject.org/files/ENCFF835YRM/@@download/ENCFF835YRM.bed.gz GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF600GQL bed narrowPeak optimal idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF610QKW, ENCFF717BRE, ENCFF835YRM 648220 ENCODE Processing Pipeline 8fade63e00782681aecbfc71a77da0a6 https://www.encodeproject.org/files/ENCFF600GQL/@@download/ENCFF600GQL.bed.gz GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF573ZIG bigWig fold change over control ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562HPN, ENCFF584LIV 342902192 ENCODE Processing Pipeline ed8110ab94db17de590fee275139f76e https://www.encodeproject.org/files/ENCFF573ZIG/@@download/ENCFF573ZIG.bigWig GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF647IAI bigWig fold change over control ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF579AOQ, ENCFF584LIV 718129144 ENCODE Processing Pipeline 6ca156c53890f3e5725fc74c5feaa86e https://www.encodeproject.org/files/ENCFF647IAI/@@download/ENCFF647IAI.bigWig GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF717BRE bed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF579AOQ, ENCFF584LIV 6660784 ENCODE Processing Pipeline b3f8d4b0d509136460ab916f7f89078b https://www.encodeproject.org/files/ENCFF717BRE/@@download/ENCFF717BRE.bed.gz GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF258UYV bigBed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF835YRM 11577055 ENCODE Processing Pipeline a0cb4b055ac85acab72a35bf26cf75c1 https://www.encodeproject.org/files/ENCFF258UYV/@@download/ENCFF258UYV.bigBed GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF955PHX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF213VYK 1333709 ENCODE Processing Pipeline eb6df5069b57b328fed1bc03d17560ee https://www.encodeproject.org/files/ENCFF955PHX/@@download/ENCFF955PHX.bigBed GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF213VYK bed narrowPeak conservative idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF610QKW, ENCFF717BRE, ENCFF835YRM 592324 ENCODE Processing Pipeline e0b6668afe2e03ca4077b36e853b726a https://www.encodeproject.org/files/ENCFF213VYK/@@download/ENCFF213VYK.bed.gz GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF972JVJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF600GQL 1457503 ENCODE Processing Pipeline a765472183f82a9c16ed001a88a3c3fa https://www.encodeproject.org/files/ENCFF972JVJ/@@download/ENCFF972JVJ.bigBed GRCh38 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF302YXC bigWig signal p-value ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339TGE, ENCFF837IOW 461456031 ENCODE Processing Pipeline e1cdb7598d39de5326773e5396eaa5dd https://www.encodeproject.org/files/ENCFF302YXC/@@download/ENCFF302YXC.bigWig hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF769IAK bigWig fold change over control ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339TGE, ENCFF837IOW 338213333 ENCODE Processing Pipeline c0d238dc0581c8c832ff9699cf765da8 https://www.encodeproject.org/files/ENCFF769IAK/@@download/ENCFF769IAK.bigWig hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF174PSA bigWig signal p-value ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF042GNN, ENCFF339TGE, ENCFF837IOW, ENCFF958RTR 850835221 ENCODE Processing Pipeline 2d8b5d9e2f73619c23b511eccc471464 https://www.encodeproject.org/files/ENCFF174PSA/@@download/ENCFF174PSA.bigWig hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF400TYC bigBed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF845PQC 11143013 ENCODE Processing Pipeline 6af337bd8b5843ec3bd40b6ea809fe92 https://www.encodeproject.org/files/ENCFF400TYC/@@download/ENCFF400TYC.bigBed hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF302BBG bigBed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF252XCG 10856385 ENCODE Processing Pipeline 389958878cbb3073b803f4c19b0c54f4 https://www.encodeproject.org/files/ENCFF302BBG/@@download/ENCFF302BBG.bigBed hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF125SQT bed narrowPeak optimal idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF123VNC, ENCFF252XCG, ENCFF845PQC 641138 ENCODE Processing Pipeline 06ace6373b4324b29c9ecfe7f0dcf980 https://www.encodeproject.org/files/ENCFF125SQT/@@download/ENCFF125SQT.bed.gz hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF327IZI bigWig fold change over control ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF042GNN, ENCFF958RTR 342876976 ENCODE Processing Pipeline f942fd48616cd31a26809a254b04628e https://www.encodeproject.org/files/ENCFF327IZI/@@download/ENCFF327IZI.bigWig hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF123VNC bed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339TGE, ENCFF837IOW 6673423 ENCODE Processing Pipeline 178687de91cc2f51c8b916badafb1d31 https://www.encodeproject.org/files/ENCFF123VNC/@@download/ENCFF123VNC.bed.gz hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF319WEO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF125SQT 1447767 ENCODE Processing Pipeline 7bde17976017b6eadd8f08b817907d93 https://www.encodeproject.org/files/ENCFF319WEO/@@download/ENCFF319WEO.bigBed hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF390HIZ bigWig signal p-value ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF042GNN, ENCFF958RTR 453052490 ENCODE Processing Pipeline cfaed3a81261fd28ab3688dc32b2264f https://www.encodeproject.org/files/ENCFF390HIZ/@@download/ENCFF390HIZ.bigWig hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF077ABG bigBed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF123VNC 11027968 ENCODE Processing Pipeline 0648900dc691225468dd438f9e76ca53 https://www.encodeproject.org/files/ENCFF077ABG/@@download/ENCFF077ABG.bigBed hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF663DKN bed narrowPeak conservative idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF123VNC, ENCFF252XCG, ENCFF845PQC 589547 ENCODE Processing Pipeline 738c927bb59185d6c24d9ec6c22b66d3 https://www.encodeproject.org/files/ENCFF663DKN/@@download/ENCFF663DKN.bed.gz hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF002UPS bigWig fold change over control ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF042GNN, ENCFF339TGE, ENCFF837IOW, ENCFF958RTR 731222796 ENCODE Processing Pipeline 7b1fbe5d0bb0f643d0dd16f5200ad7a4 https://www.encodeproject.org/files/ENCFF002UPS/@@download/ENCFF002UPS.bigWig hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF475UZP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF663DKN 1336587 ENCODE Processing Pipeline 2548a9b034b66810bde70275f05d6e73 https://www.encodeproject.org/files/ENCFF475UZP/@@download/ENCFF475UZP.bigBed hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF845PQC bed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF042GNN, ENCFF958RTR 6537897 ENCODE Processing Pipeline 2322b3a07590c5f56743de44dbba206a https://www.encodeproject.org/files/ENCFF845PQC/@@download/ENCFF845PQC.bed.gz hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF252XCG bed narrowPeak peaks ENCSR000BIF ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF042GNN, ENCFF339TGE, ENCFF837IOW, ENCFF958RTR 6674976 ENCODE Processing Pipeline 1da817a9f29fdef374d269500f28904d https://www.encodeproject.org/files/ENCFF252XCG/@@download/ENCFF252XCG.bed.gz hg19 released inconsistent platforms, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NAM bam alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NBA 1726794948 Richard Myers, HAIB adc3a9393c3da691a505da34f36d4b8b https://www.encodeproject.org/files/ENCFF000NAM/@@download/ENCFF000NAM.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NAN bam alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NAY 1707123930 Richard Myers, HAIB 9ff791f36634d0d8f9feb3476930371c https://www.encodeproject.org/files/ENCFF000NAN/@@download/ENCFF000NAN.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NAO bigBed broadPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TSJ 420399 Richard Myers, HAIB d88b0ce4deb12f7fdbb2fd162ddc99ca https://www.encodeproject.org/files/ENCFF000NAO/@@download/ENCFF000NAO.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NAP bigBed broadPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TSK 292895 Richard Myers, HAIB a3738c4daf94dc9362f0e841815ef6fa https://www.encodeproject.org/files/ENCFF000NAP/@@download/ENCFF000NAP.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NAR bigWig raw signal ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 1 25931466 Richard Myers, HAIB aa1b31be2ba863e5c98e62c7fb23a3ec https://www.encodeproject.org/files/ENCFF000NAR/@@download/ENCFF000NAR.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NAS bigWig raw signal ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 1 17960158 Richard Myers, HAIB a1bcbca86ec4c12a067a86df2a2be23e https://www.encodeproject.org/files/ENCFF000NAS/@@download/ENCFF000NAS.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NAY fastq reads ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1674577824 Richard Myers, HAIB 1c5e8facf2df72b9eb2f3153ebd0f62d https://www.encodeproject.org/files/ENCFF000NAY/@@download/ENCFF000NAY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF000NBA fastq reads ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1750258286 Richard Myers, HAIB 4c587653bbe1332a87ad4dbf08013e0a https://www.encodeproject.org/files/ENCFF000NBA/@@download/ENCFF000NBA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF001TSJ bed broadPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 1 228721 Richard Myers, HAIB 9cd66de1abc3534fbb584956539b56c5 https://www.encodeproject.org/files/ENCFF001TSJ/@@download/ENCFF001TSJ.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF001TSK bed broadPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 1 130706 Richard Myers, HAIB d361b845110bc5a04bea50a1d72e0007 https://www.encodeproject.org/files/ENCFF001TSK/@@download/ENCFF001TSK.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF002CFP bed narrowPeak optimal idr thresholded peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 295377 ENCODE Consortium Analysis Working Group 8510acb8911d45bea44d645300251632 https://www.encodeproject.org/files/ENCFF002CFP/@@download/ENCFF002CFP.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF018WMB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE ENCFF002CFP 897707 ENCODE Consortium 06709bd14748dfeff084f32b42c388b6 https://www.encodeproject.org/files/ENCFF018WMB/@@download/ENCFF018WMB.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF077CNJ bam unfiltered alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NBA, ENCFF643CGH 1877229167 ENCODE Processing Pipeline 26ce03785ce38d4b4de7a9771e01e136 https://www.encodeproject.org/files/ENCFF077CNJ/@@download/ENCFF077CNJ.bam GRCh38 released low read length biological replicates with identical biosample ENCFF485RGA bam alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NBA, ENCFF643CGH 1069569436 ENCODE Processing Pipeline d6730e4ce1d46c0db7131ad89d867e75 https://www.encodeproject.org/files/ENCFF485RGA/@@download/ENCFF485RGA.bam GRCh38 released low read length biological replicates with identical biosample ENCFF284ZYC bam unfiltered alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAY, ENCFF643CGH 1866247939 ENCODE Processing Pipeline 1bdf98ced495ed6ea3dc5830d38270dd https://www.encodeproject.org/files/ENCFF284ZYC/@@download/ENCFF284ZYC.bam GRCh38 released low read length biological replicates with identical biosample ENCFF904FSU bam alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAY, ENCFF643CGH 1116669221 ENCODE Processing Pipeline 7356902f83149158666a487832b5b152 https://www.encodeproject.org/files/ENCFF904FSU/@@download/ENCFF904FSU.bam GRCh38 released low read length biological replicates with identical biosample ENCFF730XMB bam unfiltered alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAY, ENCFF807MUK 1860104169 ENCODE Processing Pipeline 0d983fe851c511f68a189ef04a777606 https://www.encodeproject.org/files/ENCFF730XMB/@@download/ENCFF730XMB.bam hg19 released low read length biological replicates with identical biosample ENCFF883ZYB bam alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAY, ENCFF807MUK 1116643236 ENCODE Processing Pipeline 48ae1f5d1d133a5dfc359d6fd279862f https://www.encodeproject.org/files/ENCFF883ZYB/@@download/ENCFF883ZYB.bam hg19 released low read length biological replicates with identical biosample ENCFF092HRP bam alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NBA, ENCFF807MUK 1069717662 ENCODE Processing Pipeline d5ad0232e74a05e40b28735d1b8ab51f https://www.encodeproject.org/files/ENCFF092HRP/@@download/ENCFF092HRP.bam hg19 released low read length biological replicates with identical biosample ENCFF281BUQ bam unfiltered alignments ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NBA, ENCFF807MUK 1870621057 ENCODE Processing Pipeline 9a8d2089d8b973508c662ce7dcfbb3e7 https://www.encodeproject.org/files/ENCFF281BUQ/@@download/ENCFF281BUQ.bam hg19 released low read length biological replicates with identical biosample ENCFF972XWG bigWig signal p-value ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF904FSU 623535292 ENCODE Processing Pipeline beb86b61c6d3d38a573b313fdb542a6d https://www.encodeproject.org/files/ENCFF972XWG/@@download/ENCFF972XWG.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF985NJV bigWig signal p-value ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF485RGA, ENCFF904FSU 806878284 ENCODE Processing Pipeline 9ef16161327a4857aac0cde9a21aecf6 https://www.encodeproject.org/files/ENCFF985NJV/@@download/ENCFF985NJV.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF267GMR bigWig signal p-value ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF485RGA 673193231 ENCODE Processing Pipeline 999a09844a1e459aa66b07803508b218 https://www.encodeproject.org/files/ENCFF267GMR/@@download/ENCFF267GMR.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF008UBY bigWig fold change over control ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF485RGA 580550123 ENCODE Processing Pipeline 9cd54f1c3673d2501c78cce40b9c4008 https://www.encodeproject.org/files/ENCFF008UBY/@@download/ENCFF008UBY.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF588SPE bigWig fold change over control ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF904FSU 612916629 ENCODE Processing Pipeline ca082cfdea96c37061e7dbb6d79c3658 https://www.encodeproject.org/files/ENCFF588SPE/@@download/ENCFF588SPE.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF896FCK bigWig fold change over control ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF485RGA, ENCFF904FSU 921625651 ENCODE Processing Pipeline 19a926b58901eb4a710bf1383903c4c1 https://www.encodeproject.org/files/ENCFF896FCK/@@download/ENCFF896FCK.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF173GJW bed narrowPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF485RGA 6205677 ENCODE Processing Pipeline 67e1e63a25bdeffd9f10ad93bdf9afbb https://www.encodeproject.org/files/ENCFF173GJW/@@download/ENCFF173GJW.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF127DUJ bigBed narrowPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF173GJW 13249564 ENCODE Processing Pipeline de573b3a77eccb77d469609f6a2ea7ca https://www.encodeproject.org/files/ENCFF127DUJ/@@download/ENCFF127DUJ.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF314JDA bed narrowPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF485RGA, ENCFF904FSU 6885329 ENCODE Processing Pipeline 887e8562c6e1d2869c8cc3cbe35225df https://www.encodeproject.org/files/ENCFF314JDA/@@download/ENCFF314JDA.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF775JCK bigBed narrowPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF591ZXA 13148816 ENCODE Processing Pipeline 0c8145212f4fcc854f0c20d942d4fa5f https://www.encodeproject.org/files/ENCFF775JCK/@@download/ENCFF775JCK.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF650KXX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF615CVL 603746 ENCODE Processing Pipeline d2ea518d64e8a341c4661a10e101f62f https://www.encodeproject.org/files/ENCFF650KXX/@@download/ENCFF650KXX.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF591ZXA bed narrowPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF904FSU 6242729 ENCODE Processing Pipeline c2e9fd0459f1bad42febe77d02360e43 https://www.encodeproject.org/files/ENCFF591ZXA/@@download/ENCFF591ZXA.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF413ZOJ bigBed narrowPeak peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF314JDA 13171165 ENCODE Processing Pipeline 6149318d7420bebb033d47237c5cb60b https://www.encodeproject.org/files/ENCFF413ZOJ/@@download/ENCFF413ZOJ.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF615CVL bed narrowPeak conservative idr thresholded peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF173GJW, ENCFF314JDA, ENCFF419RSJ, ENCFF591ZXA 262373 ENCODE Processing Pipeline 43ab1b9209d499bf43733828018314f4 https://www.encodeproject.org/files/ENCFF615CVL/@@download/ENCFF615CVL.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF520GJC bed narrowPeak optimal idr thresholded peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF173GJW, ENCFF314JDA, ENCFF419RSJ, ENCFF591ZXA 306532 ENCODE Processing Pipeline 958f89877700b0d9215a3c961d07a91c https://www.encodeproject.org/files/ENCFF520GJC/@@download/ENCFF520GJC.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF464FIP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPY ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol GABPA-human ENCAB000AGR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF520GJC 676160 ENCODE Processing Pipeline 8d6e2b520a1e84cb57d5b59de7a6ce26 https://www.encodeproject.org/files/ENCFF464FIP/@@download/ENCFF464FIP.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF000OKX bam alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OLJ 1391721097 Richard Myers, HAIB 230e44c3a39f2fc697998443f4c6e145 https://www.encodeproject.org/files/ENCFF000OKX/@@download/ENCFF000OKX.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OKY bam alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OLH 941798604 Richard Myers, HAIB 6ffde8308564c32f2c32495e8cf46e6e https://www.encodeproject.org/files/ENCFF000OKY/@@download/ENCFF000OKY.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OKZ bigBed broadPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAM 1154293 Richard Myers, HAIB 6f80f62ccea05e9dd7dbe7fff6af80f5 https://www.encodeproject.org/files/ENCFF000OKZ/@@download/ENCFF000OKZ.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OLA bigBed broadPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UAN 781022 Richard Myers, HAIB 88828b215b46d40c25620432f42d3e18 https://www.encodeproject.org/files/ENCFF000OLA/@@download/ENCFF000OLA.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OLC bigWig raw signal ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 70122345 Richard Myers, HAIB f6ab92515fc05d38e9c16d602763f855 https://www.encodeproject.org/files/ENCFF000OLC/@@download/ENCFF000OLC.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OLE bigWig raw signal ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 31744042 Richard Myers, HAIB de78ab15183dc41424a94fa2e2e0a002 https://www.encodeproject.org/files/ENCFF000OLE/@@download/ENCFF000OLE.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OLH fastq reads ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 963407517 Richard Myers, HAIB 497af607a2b91cbae61bb4be0658ea20 https://www.encodeproject.org/files/ENCFF000OLH/@@download/ENCFF000OLH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLW/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OLJ fastq reads ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1415743113 Richard Myers, HAIB 7f5a20a08b6ae46a0bfedf3c9654d843 https://www.encodeproject.org/files/ENCFF000OLJ/@@download/ENCFF000OLJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OLW/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001UAM bed broadPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 602660 Richard Myers, HAIB 880bbd2bf1f7cefd37379261925223b8 https://www.encodeproject.org/files/ENCFF001UAM/@@download/ENCFF001UAM.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UAN bed broadPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 466059 Richard Myers, HAIB f4febae7bf9244ac9dd89d4a30376249 https://www.encodeproject.org/files/ENCFF001UAN/@@download/ENCFF001UAN.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CIO bed narrowPeak optimal idr thresholded peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 421529 ENCODE Consortium Analysis Working Group 42e49e00119db46ac1a214d2e64d3ac2 https://www.encodeproject.org/files/ENCFF002CIO/@@download/ENCFF002CIO.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF008ENS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CIO 1229794 ENCODE Consortium a9fdcca87d1e88c3201d258157c97ec9 https://www.encodeproject.org/files/ENCFF008ENS/@@download/ENCFF008ENS.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF576UCN bam unfiltered alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLH, ENCFF643CGH 1237769129 ENCODE Processing Pipeline b5f615aad831df59ec7b7518cd4209a2 https://www.encodeproject.org/files/ENCFF576UCN/@@download/ENCFF576UCN.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF853DFV bam alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLH, ENCFF643CGH 749750229 ENCODE Processing Pipeline 01dca1d3313e723a40e49795433caf9d https://www.encodeproject.org/files/ENCFF853DFV/@@download/ENCFF853DFV.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF932ZNE bam unfiltered alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OLJ, ENCFF643CGH 1761855457 ENCODE Processing Pipeline 207e3ca8fe00616d6c97e4856d1ed136 https://www.encodeproject.org/files/ENCFF932ZNE/@@download/ENCFF932ZNE.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF503BXT bam alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OLJ, ENCFF643CGH 1090532025 ENCODE Processing Pipeline 5bd706dad3129daea2e3ed94346e9764 https://www.encodeproject.org/files/ENCFF503BXT/@@download/ENCFF503BXT.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF941REB bam alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLH, ENCFF807MUK 745183936 ENCODE Processing Pipeline 2a07f5e8b903eb47330d49050c4dc338 https://www.encodeproject.org/files/ENCFF941REB/@@download/ENCFF941REB.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF566PPH bam unfiltered alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OLH, ENCFF807MUK 1235047030 ENCODE Processing Pipeline bda4f7a354478a1112c4c388ea905ff6 https://www.encodeproject.org/files/ENCFF566PPH/@@download/ENCFF566PPH.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF034UJE bam unfiltered alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OLJ, ENCFF807MUK 1759309704 ENCODE Processing Pipeline b063643660132af7f0c94430699e0253 https://www.encodeproject.org/files/ENCFF034UJE/@@download/ENCFF034UJE.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF406DOL bam alignments ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OLJ, ENCFF807MUK 1086570684 ENCODE Processing Pipeline e1691b420679aff919a0f1e4b06a669a https://www.encodeproject.org/files/ENCFF406DOL/@@download/ENCFF406DOL.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF280DWC bigWig signal p-value ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF503BXT 318102019 ENCODE Processing Pipeline 1bcd1adfdb76188484397b78442e4e8c https://www.encodeproject.org/files/ENCFF280DWC/@@download/ENCFF280DWC.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF467XTD bigWig signal p-value ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF853DFV 310882169 ENCODE Processing Pipeline 8eb0cdabc4bd1007f065178ecc3794b8 https://www.encodeproject.org/files/ENCFF467XTD/@@download/ENCFF467XTD.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF219GMG bigWig signal p-value ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF503BXT, ENCFF853DFV 290174926 ENCODE Processing Pipeline c76c650ca1f85630acaef84d92f78a92 https://www.encodeproject.org/files/ENCFF219GMG/@@download/ENCFF219GMG.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF268RFF bigWig fold change over control ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF503BXT 362779040 ENCODE Processing Pipeline 25867855e5675cad59adc54dbe9f75de https://www.encodeproject.org/files/ENCFF268RFF/@@download/ENCFF268RFF.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF977DWH bigWig fold change over control ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF853DFV 259859836 ENCODE Processing Pipeline eeeb7143d56b9d0efb136b783ddbaebd https://www.encodeproject.org/files/ENCFF977DWH/@@download/ENCFF977DWH.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF901QEL bed narrowPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF503BXT 6669092 ENCODE Processing Pipeline d72d52b968fa087ba981b54923246562 https://www.encodeproject.org/files/ENCFF901QEL/@@download/ENCFF901QEL.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF069VVC bigWig fold change over control ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF503BXT, ENCFF853DFV 539811645 ENCODE Processing Pipeline 4c7aafde81e1ac1cc2078959a4788bdf https://www.encodeproject.org/files/ENCFF069VVC/@@download/ENCFF069VVC.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF254MFX bed narrowPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF853DFV 5955756 ENCODE Processing Pipeline 91c025f018737629c49d416301f18787 https://www.encodeproject.org/files/ENCFF254MFX/@@download/ENCFF254MFX.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF340YXX bed narrowPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF503BXT, ENCFF853DFV 6932222 ENCODE Processing Pipeline 689ee27140355286870d5912c4737458 https://www.encodeproject.org/files/ENCFF340YXX/@@download/ENCFF340YXX.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF100ISH bigBed narrowPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF901QEL 12332652 ENCODE Processing Pipeline 96595a602b7b8bc331c702732400d3a1 https://www.encodeproject.org/files/ENCFF100ISH/@@download/ENCFF100ISH.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF383OYM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF403ZEO 1248835 ENCODE Processing Pipeline 92b8ab15afd8f37454f79c99db2d60eb https://www.encodeproject.org/files/ENCFF383OYM/@@download/ENCFF383OYM.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF640KXY bigBed narrowPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF254MFX 12260730 ENCODE Processing Pipeline 020ab5005554dbe557ad65554f23117d https://www.encodeproject.org/files/ENCFF640KXY/@@download/ENCFF640KXY.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF442EPX bigBed narrowPeak peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF340YXX 12284788 ENCODE Processing Pipeline a0ed9f9804a40973a13111924c9090ba https://www.encodeproject.org/files/ENCFF442EPX/@@download/ENCFF442EPX.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF554HGM bed narrowPeak conservative idr thresholded peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF254MFX, ENCFF340YXX, ENCFF419RSJ, ENCFF901QEL 497333 ENCODE Processing Pipeline aa89f65eccc5273fb9cb26701c232a11 https://www.encodeproject.org/files/ENCFF554HGM/@@download/ENCFF554HGM.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF403ZEO bed narrowPeak optimal idr thresholded peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF254MFX, ENCFF340YXX, ENCFF419RSJ, ENCFF901QEL 578005 ENCODE Processing Pipeline 26e8ac5c53c62287919176859e84d43d https://www.encodeproject.org/files/ENCFF403ZEO/@@download/ENCFF403ZEO.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF219YBB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHZ ChIP-seq EFO:0002786 GM12892 immortalized cell line unknown female unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF554HGM 1107973 ENCODE Processing Pipeline 796247b6f4ab11d4cee17dba12a8b1f5 https://www.encodeproject.org/files/ENCFF219YBB/@@download/ENCFF219YBB.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000MXE bam alignments ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000MXO 638055354 Richard Myers, HAIB bc048bfccc4f0ddf138b6e1e0be36765 https://www.encodeproject.org/files/ENCFF000MXE/@@download/ENCFF000MXE.bam hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF000MXF bigWig raw signal ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 1 7161080 Richard Myers, HAIB 18d4e02bc69c4c07ff96d4c0eab0653e https://www.encodeproject.org/files/ENCFF000MXF/@@download/ENCFF000MXF.bigWig hg19 archived mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity missing derived_from ENCFF000MXO fastq reads ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 571843778 Richard Myers, HAIB 154ebdf789091925c83e4a0b18fd218b https://www.encodeproject.org/files/ENCFF000MXO/@@download/ENCFF000MXO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NFR/ released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF891DUU bam alignments ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MXO, ENCFF807MUK 357718096 ENCODE Processing Pipeline e4cde4a186a24a728810a286168d440e https://www.encodeproject.org/files/ENCFF891DUU/@@download/ENCFF891DUU.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF741ODT bam unfiltered alignments ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MXO, ENCFF643CGH 753042313 ENCODE Processing Pipeline 239fd87dfe289b906d1cc24b8d1437d0 https://www.encodeproject.org/files/ENCFF741ODT/@@download/ENCFF741ODT.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF782JSW bam unfiltered alignments ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MXO, ENCFF807MUK 750433205 ENCODE Processing Pipeline 8400c27ac0e9e207d88b18cc63bcfe36 https://www.encodeproject.org/files/ENCFF782JSW/@@download/ENCFF782JSW.bam hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF056OHH bam alignments ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MXO, ENCFF643CGH 357614968 ENCODE Processing Pipeline 8b6619c3d8276d4ed972c877de848362 https://www.encodeproject.org/files/ENCFF056OHH/@@download/ENCFF056OHH.bam GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF565QFG bed narrowPeak peaks ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF692IRB, ENCFF891DUU 3586932 ENCODE Processing Pipeline 41358c3f0008d638324617e527486188 https://www.encodeproject.org/files/ENCFF565QFG/@@download/ENCFF565QFG.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF576PUH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF419RSJ, ENCFF535HFM 52880 ENCODE Processing Pipeline bf3ee74b789d36125e1e32933b8e0db7 https://www.encodeproject.org/files/ENCFF576PUH/@@download/ENCFF576PUH.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF639NAX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF576PUH 128476 ENCODE Processing Pipeline ba91079f3fec382cab1ae8448cff5fb2 https://www.encodeproject.org/files/ENCFF639NAX/@@download/ENCFF639NAX.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF311UFN bigWig fold change over control ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF692IRB, ENCFF891DUU 198056441 ENCODE Processing Pipeline 04d9dec090970ae81116af2f6c0b6ec2 https://www.encodeproject.org/files/ENCFF311UFN/@@download/ENCFF311UFN.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF926GCZ bigBed narrowPeak peaks ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF565QFG 7603048 ENCODE Processing Pipeline 7026b133cb0a626c007fecad2e5572fc https://www.encodeproject.org/files/ENCFF926GCZ/@@download/ENCFF926GCZ.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF913LCH bigWig signal p-value ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF056OHH, ENCFF353UFN 258377889 ENCODE Processing Pipeline 704b22aa036f75160595ce32697a42aa https://www.encodeproject.org/files/ENCFF913LCH/@@download/ENCFF913LCH.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF157FKC bigWig fold change over control ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF056OHH, ENCFF353UFN 200691817 ENCODE Processing Pipeline 4d26bbefe106ca323844354afd4ab289 https://www.encodeproject.org/files/ENCFF157FKC/@@download/ENCFF157FKC.bigWig GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF535HFM bed narrowPeak peaks ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF056OHH, ENCFF353UFN 3584619 ENCODE Processing Pipeline bf4de1046cf61a78bde3ed24b0a517a0 https://www.encodeproject.org/files/ENCFF535HFM/@@download/ENCFF535HFM.bed.gz GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF236FJC bigBed narrowPeak peaks ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF535HFM 7631395 ENCODE Processing Pipeline f0aebbeac48bd1b4ffd095db750145f0 https://www.encodeproject.org/files/ENCFF236FJC/@@download/ENCFF236FJC.bigBed GRCh38 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF345HWI bigWig signal p-value ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF692IRB, ENCFF891DUU 278000786 ENCODE Processing Pipeline db36e6fa75349a383b9bc277217add89 https://www.encodeproject.org/files/ENCFF345HWI/@@download/ENCFF345HWI.bigWig hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF716FAV bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF001TDO, ENCFF565QFG 51218 ENCODE Processing Pipeline c92dca95e55185d288d122c972f3dea9 https://www.encodeproject.org/files/ENCFF716FAV/@@download/ENCFF716FAV.bed.gz hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF694QZV bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRA ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol CREB1-human ENCAB000AFN DNA see document see document False 2012-02-29 ENCODE 1 ENCFF716FAV 126082 ENCODE Processing Pipeline 84ef6f2edb22f1cb2b08d941bdf61592 https://www.encodeproject.org/files/ENCFF694QZV/@@download/ENCFF694QZV.bigBed hg19 released mild to moderate bottlenecking, control low read depth, low read length, low read depth, moderate library complexity ENCFF000NEJ bam alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NEQ 640372418 Richard Myers, HAIB d42317c957853b2c47b7c693ee2b5677 https://www.encodeproject.org/files/ENCFF000NEJ/@@download/ENCFF000NEJ.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEK bigBed broadPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TTF 785235 Richard Myers, HAIB 6f09f3cc18cbb30ccb4265cdff871765 https://www.encodeproject.org/files/ENCFF000NEK/@@download/ENCFF000NEK.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEL bigBed broadPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TTG 1142912 Richard Myers, HAIB d845d73d1183c7695b25261d321ae5fc https://www.encodeproject.org/files/ENCFF000NEL/@@download/ENCFF000NEL.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEM bam alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NEV 894863278 Richard Myers, HAIB d7ca515255bb2ce76485af91be30672f https://www.encodeproject.org/files/ENCFF000NEM/@@download/ENCFF000NEM.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEN bigWig raw signal ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 53673291 Richard Myers, HAIB 757685c5e9e0ccc9335a1ccc7cbf5e20 https://www.encodeproject.org/files/ENCFF000NEN/@@download/ENCFF000NEN.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEO bigWig raw signal ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 66630878 Richard Myers, HAIB ac68b5781d30bcb5fd010faa6cdbaa21 https://www.encodeproject.org/files/ENCFF000NEO/@@download/ENCFF000NEO.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEQ fastq reads ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 591777255 Richard Myers, HAIB 5bb320a8a52367b02710858e42aedb6a https://www.encodeproject.org/files/ENCFF000NEQ/@@download/ENCFF000NEQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NFZ/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000NEV fastq reads ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 2440367269 Richard Myers, HAIB ab323071882f93aef2cd26d5a1bb372d https://www.encodeproject.org/files/ENCFF000NEV/@@download/ENCFF000NEV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NFZ/ released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF001TTF bed broadPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 420370 Richard Myers, HAIB 0bf98b8153e9660902505764c875efc4 https://www.encodeproject.org/files/ENCFF001TTF/@@download/ENCFF001TTF.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF001TTG bed broadPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 638444 Richard Myers, HAIB c050ad67dce19346e6db24a615312b00 https://www.encodeproject.org/files/ENCFF001TTG/@@download/ENCFF001TTG.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF002CFW bed narrowPeak optimal idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 577733 ENCODE Consortium Analysis Working Group 140ea27d7d1b5b9bf446ebf6ad5b8be5 https://www.encodeproject.org/files/ENCFF002CFW/@@download/ENCFF002CFW.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF747QML bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CFW 1574340 ENCODE Consortium 318275690afb1da9bceb65fc8e6872be https://www.encodeproject.org/files/ENCFF747QML/@@download/ENCFF747QML.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF600YAF bam unfiltered alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NEQ, ENCFF807MUK 701287767 ENCODE Processing Pipeline 460b04ca5b56aebcf941becbe2d90efe https://www.encodeproject.org/files/ENCFF600YAF/@@download/ENCFF600YAF.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF380ZHO bam unfiltered alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NEQ, ENCFF643CGH 701799098 ENCODE Processing Pipeline 5799f307508f30fd89465c391b4e793c https://www.encodeproject.org/files/ENCFF380ZHO/@@download/ENCFF380ZHO.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF960AWO bam alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NEV, ENCFF643CGH 507934740 ENCODE Processing Pipeline bbc7e58205196c6be754e5cd6aac4bfe https://www.encodeproject.org/files/ENCFF960AWO/@@download/ENCFF960AWO.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF408LVE bam alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NEV, ENCFF807MUK 508391394 ENCODE Processing Pipeline 90db11161162e27124733e72052c7dbf https://www.encodeproject.org/files/ENCFF408LVE/@@download/ENCFF408LVE.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF471JEL bam unfiltered alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NEV, ENCFF643CGH 2719604713 ENCODE Processing Pipeline b7306b738fe2d7d7e22c34b5385e04e8 https://www.encodeproject.org/files/ENCFF471JEL/@@download/ENCFF471JEL.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF074RXF bam unfiltered alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NEV, ENCFF807MUK 2718148109 ENCODE Processing Pipeline 360a68f3899da04f389c652b9c149558 https://www.encodeproject.org/files/ENCFF074RXF/@@download/ENCFF074RXF.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF593TPG bam alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NEQ, ENCFF643CGH 249287134 ENCODE Processing Pipeline 3f445a148ab4d4a92f4ed947fb00a52e https://www.encodeproject.org/files/ENCFF593TPG/@@download/ENCFF593TPG.bam GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF880YCS bam alignments ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NEQ, ENCFF807MUK 249582892 ENCODE Processing Pipeline b923c59acf9740cb9d27bc2e42b4f379 https://www.encodeproject.org/files/ENCFF880YCS/@@download/ENCFF880YCS.bam hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF446OMR bigWig signal p-value ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF466VLR, ENCFF593TPG 240720450 ENCODE Processing Pipeline 2a0efc23292a2a47b0a2489a5a0b1f6c https://www.encodeproject.org/files/ENCFF446OMR/@@download/ENCFF446OMR.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF357DRS bigWig signal p-value ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF466VLR, ENCFF960AWO 253851650 ENCODE Processing Pipeline 9fdf491131b4e3248fd5ef638eed4cc4 https://www.encodeproject.org/files/ENCFF357DRS/@@download/ENCFF357DRS.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF274LJN bigWig signal p-value ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF466VLR, ENCFF593TPG, ENCFF960AWO 297743406 ENCODE Processing Pipeline 5d7d9ce6fb3e6633d40de3c7b1bf11b9 https://www.encodeproject.org/files/ENCFF274LJN/@@download/ENCFF274LJN.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF529BGD bigWig fold change over control ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF466VLR, ENCFF593TPG 102878340 ENCODE Processing Pipeline ce188a8e1370b0d2f97bc02967d9bd32 https://www.encodeproject.org/files/ENCFF529BGD/@@download/ENCFF529BGD.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF535SPO bigWig fold change over control ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF466VLR, ENCFF960AWO 153386588 ENCODE Processing Pipeline 2965254db215233eb44ddae057e3b374 https://www.encodeproject.org/files/ENCFF535SPO/@@download/ENCFF535SPO.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF688CLH bigWig fold change over control ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF466VLR, ENCFF593TPG, ENCFF960AWO 214218105 ENCODE Processing Pipeline 7069e1a81f3fa0c2b02953d3b2cf6ad5 https://www.encodeproject.org/files/ENCFF688CLH/@@download/ENCFF688CLH.bigWig GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF161NZT bed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF466VLR, ENCFF593TPG 2544304 ENCODE Processing Pipeline 5de7a5fa11ada7ab9a822ef1bb2725d7 https://www.encodeproject.org/files/ENCFF161NZT/@@download/ENCFF161NZT.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF744ESR bed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF466VLR, ENCFF960AWO 4499943 ENCODE Processing Pipeline 5bd23246a6d53b3395b19311f76aff74 https://www.encodeproject.org/files/ENCFF744ESR/@@download/ENCFF744ESR.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF825AZS bed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF466VLR, ENCFF593TPG, ENCFF960AWO 5891554 ENCODE Processing Pipeline 5dcfc3769c9d446293aaa2ff94e4deb0 https://www.encodeproject.org/files/ENCFF825AZS/@@download/ENCFF825AZS.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF509QKH bigBed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF161NZT 5484408 ENCODE Processing Pipeline 8902d1a4b5af3018b60c851606426ecd https://www.encodeproject.org/files/ENCFF509QKH/@@download/ENCFF509QKH.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF427GFA bigBed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF744ESR 9586638 ENCODE Processing Pipeline b476866261100f9c50197ac273d12105 https://www.encodeproject.org/files/ENCFF427GFA/@@download/ENCFF427GFA.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF290OEK bigBed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF825AZS 12138719 ENCODE Processing Pipeline 4a83214c41a13852f5cdca642ca2db05 https://www.encodeproject.org/files/ENCFF290OEK/@@download/ENCFF290OEK.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF689QHF bed narrowPeak conservative idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF161NZT, ENCFF419RSJ, ENCFF744ESR, ENCFF825AZS 458077 ENCODE Processing Pipeline f28e9dca1d3dbd39d94b3167568a815b https://www.encodeproject.org/files/ENCFF689QHF/@@download/ENCFF689QHF.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF569TMT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF689QHF 1144205 ENCODE Processing Pipeline 164deab56ad6069d51b39a291609e490 https://www.encodeproject.org/files/ENCFF569TMT/@@download/ENCFF569TMT.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF915LKZ bed narrowPeak optimal idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF161NZT, ENCFF419RSJ, ENCFF744ESR, ENCFF825AZS 493827 ENCODE Processing Pipeline 6474d9d3335056a57e5388bcb08292bf https://www.encodeproject.org/files/ENCFF915LKZ/@@download/ENCFF915LKZ.bed.gz GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF163VQB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF915LKZ 1203634 ENCODE Processing Pipeline a97139d06e0c5087ae1cd798482e0a02 https://www.encodeproject.org/files/ENCFF163VQB/@@download/ENCFF163VQB.bigBed GRCh38 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF867UPN bigWig signal p-value ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF161DLA, ENCFF880YCS 257443525 ENCODE Processing Pipeline 49ccc8f31b0f50be87267ff09a43d227 https://www.encodeproject.org/files/ENCFF867UPN/@@download/ENCFF867UPN.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF563SON bigWig signal p-value ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF161DLA, ENCFF408LVE 266683197 ENCODE Processing Pipeline f5bc9f979457927f48ffc65e144735b5 https://www.encodeproject.org/files/ENCFF563SON/@@download/ENCFF563SON.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF169VIK bigWig signal p-value ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF161DLA, ENCFF408LVE, ENCFF880YCS 297800290 ENCODE Processing Pipeline 2479ac3d771f65a75af56ca393323ecc https://www.encodeproject.org/files/ENCFF169VIK/@@download/ENCFF169VIK.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF100PJS bigWig fold change over control ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF161DLA, ENCFF880YCS 103387571 ENCODE Processing Pipeline 4870f5d87ca381a41a75fcad32da0dcc https://www.encodeproject.org/files/ENCFF100PJS/@@download/ENCFF100PJS.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF161EXA bigWig fold change over control ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF161DLA, ENCFF408LVE 153517691 ENCODE Processing Pipeline 45253d92cbf1abd333a73ca93f58f25d https://www.encodeproject.org/files/ENCFF161EXA/@@download/ENCFF161EXA.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF453CBY bigWig fold change over control ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF161DLA, ENCFF408LVE, ENCFF880YCS 214001129 ENCODE Processing Pipeline 44a59dc81593400d034cb74446279215 https://www.encodeproject.org/files/ENCFF453CBY/@@download/ENCFF453CBY.bigWig hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF620JEB bed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF161DLA, ENCFF408LVE, ENCFF880YCS 5892644 ENCODE Processing Pipeline 793843e2517f8ae710c096135e23535c https://www.encodeproject.org/files/ENCFF620JEB/@@download/ENCFF620JEB.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF049WBH bigBed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF265TSG 5483771 ENCODE Processing Pipeline 6769945fa6b2676e8463dbf69012362e https://www.encodeproject.org/files/ENCFF049WBH/@@download/ENCFF049WBH.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF551TPK bigBed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF315RID 9580846 ENCODE Processing Pipeline 6de1cc810cc285558c5b7882125f0d09 https://www.encodeproject.org/files/ENCFF551TPK/@@download/ENCFF551TPK.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF073HTJ bigBed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF620JEB 12136750 ENCODE Processing Pipeline 0d213cd83f0dda0d06042883b5b15b0d https://www.encodeproject.org/files/ENCFF073HTJ/@@download/ENCFF073HTJ.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF315SPJ bed narrowPeak conservative idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF265TSG, ENCFF315RID, ENCFF620JEB 458771 ENCODE Processing Pipeline 3057f509f26dfcda8638813d3139614f https://www.encodeproject.org/files/ENCFF315SPJ/@@download/ENCFF315SPJ.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF951FBF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF315SPJ 1142432 ENCODE Processing Pipeline c41a53f87b9c8828e04f518b74e38b45 https://www.encodeproject.org/files/ENCFF951FBF/@@download/ENCFF951FBF.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF532MZI bed narrowPeak optimal idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF265TSG, ENCFF315RID, ENCFF620JEB 494725 ENCODE Processing Pipeline bc7c9525a38b23ac07d0f598744dab17 https://www.encodeproject.org/files/ENCFF532MZI/@@download/ENCFF532MZI.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF113DVJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF532MZI 1203582 ENCODE Processing Pipeline 36015a023288f8db34ee692e67f1d5fb https://www.encodeproject.org/files/ENCFF113DVJ/@@download/ENCFF113DVJ.bigBed hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF265TSG bed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF161DLA, ENCFF880YCS 2544254 ENCODE Processing Pipeline cc4c0cbe2396f656a4468b1039dbc7f9 https://www.encodeproject.org/files/ENCFF265TSG/@@download/ENCFF265TSG.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF315RID bed narrowPeak peaks ENCSR000BHI ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF161DLA, ENCFF408LVE 4497911 ENCODE Processing Pipeline 8839c5dbe8e64fe69ff2244011d78b7e https://www.encodeproject.org/files/ENCFF315RID/@@download/ENCFF315RID.bed.gz hg19 released control low read depth, low read length, low read depth, mild to moderate bottlenecking missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF698KPI fastq reads ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1205005843 Richard Myers, HAIB 324f3f39f868e8dfb687446c7fd87e42 SRA:SRR5339077 https://www.encodeproject.org/files/ENCFF698KPI/@@download/ENCFF698KPI.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF088SMS fastq reads ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1211230802 Richard Myers, HAIB 2a8b99fee320f8b41345f3fd7abb7bb6 SRA:SRR5339078 https://www.encodeproject.org/files/ENCFF088SMS/@@download/ENCFF088SMS.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF823FMM bam unfiltered alignments ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF088SMS, ENCFF807MUK 1307527432 ENCODE Processing Pipeline 3e6d108865dd0d08e43ddedbce633834 https://www.encodeproject.org/files/ENCFF823FMM/@@download/ENCFF823FMM.bam hg19 released antibody characterized with exemption, low read depth ENCFF805XFC bam unfiltered alignments ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF698KPI, ENCFF807MUK 1275496749 ENCODE Processing Pipeline e3a67e5a9cf22d8d822486e8cc576bae https://www.encodeproject.org/files/ENCFF805XFC/@@download/ENCFF805XFC.bam hg19 released antibody characterized with exemption, low read depth ENCFF785RZQ bam unfiltered alignments ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF088SMS, ENCFF643CGH 1309861064 ENCODE Processing Pipeline 373a37ff33025d3f05a0b4fd5717d4f9 https://www.encodeproject.org/files/ENCFF785RZQ/@@download/ENCFF785RZQ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF690HCF bam alignments ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF698KPI 991625584 ENCODE Processing Pipeline ccf019d90c7c0ab5c31b64797921d223 https://www.encodeproject.org/files/ENCFF690HCF/@@download/ENCFF690HCF.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF459ELG bam unfiltered alignments ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF698KPI 1277483305 ENCODE Processing Pipeline 97cea1477ac88c24c718fc183a5260c6 https://www.encodeproject.org/files/ENCFF459ELG/@@download/ENCFF459ELG.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF601XNO bam alignments ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF088SMS, ENCFF643CGH 1024706840 ENCODE Processing Pipeline 47a09db54021c9c932b89fab8e73ba50 https://www.encodeproject.org/files/ENCFF601XNO/@@download/ENCFF601XNO.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF683LTQ bam alignments ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF088SMS, ENCFF807MUK 1024351817 ENCODE Processing Pipeline 80d11edba0ecfc6535cfd1bf843328ce https://www.encodeproject.org/files/ENCFF683LTQ/@@download/ENCFF683LTQ.bam hg19 released antibody characterized with exemption, low read depth ENCFF195PDT bam alignments ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF698KPI, ENCFF807MUK 991369735 ENCODE Processing Pipeline 865b23ed8c9a5ca4e4e9e50d384a7c90 https://www.encodeproject.org/files/ENCFF195PDT/@@download/ENCFF195PDT.bam hg19 released antibody characterized with exemption, low read depth ENCFF282LIB bigWig signal p-value ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF690HCF 454612544 ENCODE Processing Pipeline 1526bb9c805b3f7bf5c0150a37b199a9 https://www.encodeproject.org/files/ENCFF282LIB/@@download/ENCFF282LIB.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF535PME bigWig signal p-value ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF601XNO 434932878 ENCODE Processing Pipeline c17d3b6ca9d86f26e8911f2e9d4a87d9 https://www.encodeproject.org/files/ENCFF535PME/@@download/ENCFF535PME.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF608IDA bigWig signal p-value ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF601XNO, ENCFF690HCF 642644154 ENCODE Processing Pipeline 0189645898a6a2f26257b3053d8cd63a https://www.encodeproject.org/files/ENCFF608IDA/@@download/ENCFF608IDA.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF689CUH bigWig fold change over control ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF601XNO 406979169 ENCODE Processing Pipeline a2742dcccd3fdf3a3984d526eda7c2fe https://www.encodeproject.org/files/ENCFF689CUH/@@download/ENCFF689CUH.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF398YUW bigWig fold change over control ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF690HCF 387927493 ENCODE Processing Pipeline 6ec97d793491d0310e8cb168b4aa5848 https://www.encodeproject.org/files/ENCFF398YUW/@@download/ENCFF398YUW.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF628RAB bed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF690HCF 6476478 ENCODE Processing Pipeline 85dbe0f75d751c2be4e6d9d0adf37d4c https://www.encodeproject.org/files/ENCFF628RAB/@@download/ENCFF628RAB.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF321MUC bed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF601XNO 6082547 ENCODE Processing Pipeline 7254021d96de54064059feef93d97def https://www.encodeproject.org/files/ENCFF321MUC/@@download/ENCFF321MUC.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF870PDE bigWig fold change over control ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF601XNO, ENCFF690HCF 666387773 ENCODE Processing Pipeline 38edd095b60ac53eef8b1bb1cbdd0c77 https://www.encodeproject.org/files/ENCFF870PDE/@@download/ENCFF870PDE.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF750YCY bigBed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF628RAB 12801300 ENCODE Processing Pipeline 59cba8a9b88593285a8ac39e67c07940 https://www.encodeproject.org/files/ENCFF750YCY/@@download/ENCFF750YCY.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF524KBX bed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF601XNO, ENCFF690HCF 6890575 ENCODE Processing Pipeline 23c71dc1328c2d6cac780c5e209cd860 https://www.encodeproject.org/files/ENCFF524KBX/@@download/ENCFF524KBX.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF683EPB bigBed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF321MUC 12926547 ENCODE Processing Pipeline f783e593f4c66f2d2916faabd9006266 https://www.encodeproject.org/files/ENCFF683EPB/@@download/ENCFF683EPB.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF263AUE bed narrowPeak conservative idr thresholded peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF321MUC, ENCFF419RSJ, ENCFF524KBX, ENCFF628RAB 199872 ENCODE Processing Pipeline cdd43f77bee620e96cf1da10a59465aa https://www.encodeproject.org/files/ENCFF263AUE/@@download/ENCFF263AUE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF780LVD bigBed narrowPeak optimal idr thresholded peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF159FGZ 455064 ENCODE Processing Pipeline b503709cbb0061d8c5435af9ecbb7dbc https://www.encodeproject.org/files/ENCFF780LVD/@@download/ENCFF780LVD.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF876BXU bigBed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF524KBX 12728657 ENCODE Processing Pipeline 3174af17bbba7fb20c99e268958b1ff2 https://www.encodeproject.org/files/ENCFF876BXU/@@download/ENCFF876BXU.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF159FGZ bed narrowPeak optimal idr thresholded peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF321MUC, ENCFF419RSJ, ENCFF524KBX, ENCFF628RAB 211814 ENCODE Processing Pipeline f5da2389c0548ee99cef65d38468c56a https://www.encodeproject.org/files/ENCFF159FGZ/@@download/ENCFF159FGZ.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF570SAF bigBed narrowPeak conservative idr thresholded peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF263AUE 434416 ENCODE Processing Pipeline b853d2bb97000e722e7cb469ebaac4cf https://www.encodeproject.org/files/ENCFF570SAF/@@download/ENCFF570SAF.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF470IVC bigWig signal p-value ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF195PDT, ENCFF203ABR 1074541616 ENCODE Processing Pipeline 36437a2e9313b225fb7893d7281d5bd8 https://www.encodeproject.org/files/ENCFF470IVC/@@download/ENCFF470IVC.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF178JXQ bigWig signal p-value ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF683LTQ 1276053842 ENCODE Processing Pipeline 4778a9faebfde386e47457dc841872b8 https://www.encodeproject.org/files/ENCFF178JXQ/@@download/ENCFF178JXQ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF463BFH bigWig signal p-value ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF195PDT, ENCFF203ABR, ENCFF683LTQ 1247101323 ENCODE Processing Pipeline edc663e3b9c44d69e62691c2dab22beb https://www.encodeproject.org/files/ENCFF463BFH/@@download/ENCFF463BFH.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF012WEB bigWig fold change over control ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF195PDT, ENCFF203ABR 798571276 ENCODE Processing Pipeline 12fd75ff119c1ae81d514852a2da347c https://www.encodeproject.org/files/ENCFF012WEB/@@download/ENCFF012WEB.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF003RQQ bigWig fold change over control ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF683LTQ 814742952 ENCODE Processing Pipeline 550fba233f20d238964c31567871ec90 https://www.encodeproject.org/files/ENCFF003RQQ/@@download/ENCFF003RQQ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF731PDO bigWig fold change over control ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF195PDT, ENCFF203ABR, ENCFF683LTQ 1200390813 ENCODE Processing Pipeline beb4afec1b990a4e92555c912327dda1 https://www.encodeproject.org/files/ENCFF731PDO/@@download/ENCFF731PDO.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF366NSR bed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF195PDT, ENCFF203ABR 6959474 ENCODE Processing Pipeline 911257a38ceea9aafd1e0ebc01945d69 https://www.encodeproject.org/files/ENCFF366NSR/@@download/ENCFF366NSR.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF129XQZ bed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF683LTQ 6796320 ENCODE Processing Pipeline 8415f37ef135ea912bbd84f5e473f873 https://www.encodeproject.org/files/ENCFF129XQZ/@@download/ENCFF129XQZ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF564FVF bed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF195PDT, ENCFF203ABR, ENCFF683LTQ 7171643 ENCODE Processing Pipeline cb09920d3e3a639ea21072fefd62902c https://www.encodeproject.org/files/ENCFF564FVF/@@download/ENCFF564FVF.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF530IVU bigBed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF129XQZ 12867237 ENCODE Processing Pipeline 2798364823411c7705ab9044fa2897e7 https://www.encodeproject.org/files/ENCFF530IVU/@@download/ENCFF530IVU.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF888DRP bigBed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF366NSR 12632229 ENCODE Processing Pipeline 85060cfced3aa42e4e2e3d5a34507e41 https://www.encodeproject.org/files/ENCFF888DRP/@@download/ENCFF888DRP.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF187AVG bigBed narrowPeak peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF564FVF 12613712 ENCODE Processing Pipeline 816f28639f3b973d435c183ba40096b6 https://www.encodeproject.org/files/ENCFF187AVG/@@download/ENCFF187AVG.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF688WNG bed narrowPeak optimal idr thresholded peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF129XQZ, ENCFF366NSR, ENCFF564FVF 184995 ENCODE Processing Pipeline a3d70f04c40181c826c86973537a78f2 https://www.encodeproject.org/files/ENCFF688WNG/@@download/ENCFF688WNG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF927VDP bigBed narrowPeak optimal idr thresholded peaks ENCSR654ORQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SLC30A9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF688WNG 418980 ENCODE Processing Pipeline 5bc88e9fc6db6e15a2c1a538e798f915 https://www.encodeproject.org/files/ENCFF927VDP/@@download/ENCFF927VDP.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF085MHP fastq reads ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1639588227 Richard Myers, HAIB 1fa157860b51bd976db5dbc0923baadd SRA:SRR5338954 https://www.encodeproject.org/files/ENCFF085MHP/@@download/ENCFF085MHP.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF851FHG fastq reads ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1785314512 Richard Myers, HAIB bdd89631cdf1daf415161765046434a9 SRA:SRR5338955 https://www.encodeproject.org/files/ENCFF851FHG/@@download/ENCFF851FHG.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF559OAK bam unfiltered alignments ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF851FHG 2092659251 ENCODE Processing Pipeline c6876448b90dffb3307b46eed644b73b https://www.encodeproject.org/files/ENCFF559OAK/@@download/ENCFF559OAK.bam GRCh38 released antibody characterized with exemption ENCFF558CTF bam unfiltered alignments ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF085MHP, ENCFF643CGH 1923825783 ENCODE Processing Pipeline 13e708fcad289fbb3c6ad89ca868babe https://www.encodeproject.org/files/ENCFF558CTF/@@download/ENCFF558CTF.bam GRCh38 released antibody characterized with exemption ENCFF691WVL bam unfiltered alignments ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF085MHP, ENCFF807MUK 1920184799 ENCODE Processing Pipeline e11e35e6eab37e647505634819d7ba55 https://www.encodeproject.org/files/ENCFF691WVL/@@download/ENCFF691WVL.bam hg19 released antibody characterized with exemption ENCFF819VRY bam unfiltered alignments ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF851FHG 2088311092 ENCODE Processing Pipeline 9ad683e762b516e40917947b105a7f08 https://www.encodeproject.org/files/ENCFF819VRY/@@download/ENCFF819VRY.bam hg19 released antibody characterized with exemption ENCFF819ZGP bam alignments ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF085MHP, ENCFF643CGH 1433748294 ENCODE Processing Pipeline d800ff56f1adf6434617b103582629a9 https://www.encodeproject.org/files/ENCFF819ZGP/@@download/ENCFF819ZGP.bam GRCh38 released antibody characterized with exemption ENCFF998NVU bam alignments ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF085MHP, ENCFF807MUK 1433233502 ENCODE Processing Pipeline d7eb40bff0e41083a0dc7e4bedb78918 https://www.encodeproject.org/files/ENCFF998NVU/@@download/ENCFF998NVU.bam hg19 released antibody characterized with exemption ENCFF900SVA bam alignments ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF851FHG 1575377128 ENCODE Processing Pipeline 121da5ebf96ca1e51400f2431edb6663 https://www.encodeproject.org/files/ENCFF900SVA/@@download/ENCFF900SVA.bam GRCh38 released antibody characterized with exemption ENCFF784VQV bam alignments ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF851FHG 1574628033 ENCODE Processing Pipeline 7b2bddf087ff5f8a296a99d60a1d76ff https://www.encodeproject.org/files/ENCFF784VQV/@@download/ENCFF784VQV.bam hg19 released antibody characterized with exemption ENCFF875SHW bigWig signal p-value ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF900SVA 605948669 ENCODE Processing Pipeline adf0c878237a216ca315a361b63ae49a https://www.encodeproject.org/files/ENCFF875SHW/@@download/ENCFF875SHW.bigWig GRCh38 released antibody characterized with exemption ENCFF576QNF bigWig signal p-value ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF819ZGP 489307384 ENCODE Processing Pipeline 27daeb9d809357ba48a73cfbd336d3df https://www.encodeproject.org/files/ENCFF576QNF/@@download/ENCFF576QNF.bigWig GRCh38 released antibody characterized with exemption ENCFF186CVZ bigWig signal p-value ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF819ZGP, ENCFF900SVA 670623418 ENCODE Processing Pipeline 322a54ea04eb541fc47818cf6a00b224 https://www.encodeproject.org/files/ENCFF186CVZ/@@download/ENCFF186CVZ.bigWig GRCh38 released antibody characterized with exemption ENCFF397PVN bigWig fold change over control ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF900SVA 579066413 ENCODE Processing Pipeline 9db8e9159f540caf5e4bab62e4a423bb https://www.encodeproject.org/files/ENCFF397PVN/@@download/ENCFF397PVN.bigWig GRCh38 released antibody characterized with exemption ENCFF071RVQ bigWig fold change over control ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF819ZGP 532604336 ENCODE Processing Pipeline a8178dba16efdb55d433f78167e03c41 https://www.encodeproject.org/files/ENCFF071RVQ/@@download/ENCFF071RVQ.bigWig GRCh38 released antibody characterized with exemption ENCFF448DBP bigWig fold change over control ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF819ZGP, ENCFF900SVA 934806541 ENCODE Processing Pipeline 3540e9a9e3735ea7b0fc0bbbd24d296e https://www.encodeproject.org/files/ENCFF448DBP/@@download/ENCFF448DBP.bigWig GRCh38 released antibody characterized with exemption ENCFF361EFH bed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF819ZGP, ENCFF900SVA 6707040 ENCODE Processing Pipeline 912ea76eb7138d73b88dc33ff038d2cd https://www.encodeproject.org/files/ENCFF361EFH/@@download/ENCFF361EFH.bed.gz GRCh38 released antibody characterized with exemption ENCFF918BXV bed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF900SVA 5980772 ENCODE Processing Pipeline 83302312b07d3f8e7ece2de66804b931 https://www.encodeproject.org/files/ENCFF918BXV/@@download/ENCFF918BXV.bed.gz GRCh38 released antibody characterized with exemption ENCFF803SFF bed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF819ZGP 6206834 ENCODE Processing Pipeline 126c288415b44e1947026a2dceafca70 https://www.encodeproject.org/files/ENCFF803SFF/@@download/ENCFF803SFF.bed.gz GRCh38 released antibody characterized with exemption ENCFF361TVP bigBed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF918BXV 13210048 ENCODE Processing Pipeline 11ede9f0f646e0189243c152732a7f15 https://www.encodeproject.org/files/ENCFF361TVP/@@download/ENCFF361TVP.bigBed GRCh38 released antibody characterized with exemption ENCFF170AJS bigBed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF803SFF 13104827 ENCODE Processing Pipeline 407f33ee4061f86eca048a4b344d05e9 https://www.encodeproject.org/files/ENCFF170AJS/@@download/ENCFF170AJS.bigBed GRCh38 released antibody characterized with exemption ENCFF945DTV bed narrowPeak conservative idr thresholded peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF361EFH, ENCFF419RSJ, ENCFF803SFF, ENCFF918BXV 418989 ENCODE Processing Pipeline 608831420ca27f242a0bfc1e61968cb5 https://www.encodeproject.org/files/ENCFF945DTV/@@download/ENCFF945DTV.bed.gz GRCh38 released antibody characterized with exemption ENCFF567KTD bigBed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF361EFH 13113693 ENCODE Processing Pipeline 1289f0f5ce80ac7e4f42135f71a573ee https://www.encodeproject.org/files/ENCFF567KTD/@@download/ENCFF567KTD.bigBed GRCh38 released antibody characterized with exemption ENCFF670IRA bigBed narrowPeak optimal idr thresholded peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF277NOY 844247 ENCODE Processing Pipeline e44589f51226aa846834b7dde530bf70 https://www.encodeproject.org/files/ENCFF670IRA/@@download/ENCFF670IRA.bigBed GRCh38 released antibody characterized with exemption ENCFF969THT bigBed narrowPeak conservative idr thresholded peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF945DTV 844983 ENCODE Processing Pipeline db429800dca0b7d984f22955734da066 https://www.encodeproject.org/files/ENCFF969THT/@@download/ENCFF969THT.bigBed GRCh38 released antibody characterized with exemption ENCFF277NOY bed narrowPeak optimal idr thresholded peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF361EFH, ENCFF419RSJ, ENCFF803SFF, ENCFF918BXV 418411 ENCODE Processing Pipeline 340304a124aa603c0975e19190c40ca0 https://www.encodeproject.org/files/ENCFF277NOY/@@download/ENCFF277NOY.bed.gz GRCh38 released antibody characterized with exemption ENCFF066LAP bigWig signal p-value ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF784VQV 1168324102 ENCODE Processing Pipeline 6222d68d44661e0cb132230b11018a58 https://www.encodeproject.org/files/ENCFF066LAP/@@download/ENCFF066LAP.bigWig hg19 released antibody characterized with exemption ENCFF950XKK bigWig signal p-value ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF998NVU 1199649249 ENCODE Processing Pipeline 0a52ea49c2c0333ef76cd92dd8fca1fc https://www.encodeproject.org/files/ENCFF950XKK/@@download/ENCFF950XKK.bigWig hg19 released antibody characterized with exemption ENCFF424EQK bigWig signal p-value ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF784VQV, ENCFF998NVU 1566252520 ENCODE Processing Pipeline 8354cb692e21b04b5836985ac2294cb1 https://www.encodeproject.org/files/ENCFF424EQK/@@download/ENCFF424EQK.bigWig hg19 released antibody characterized with exemption ENCFF704DKL bigWig fold change over control ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF784VQV 1066407713 ENCODE Processing Pipeline d8db5bbb05684f424be300e798fe9657 https://www.encodeproject.org/files/ENCFF704DKL/@@download/ENCFF704DKL.bigWig hg19 released antibody characterized with exemption ENCFF987SIX bigWig fold change over control ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF998NVU 1001855922 ENCODE Processing Pipeline a2932144520d96ae91042c09de49b51b https://www.encodeproject.org/files/ENCFF987SIX/@@download/ENCFF987SIX.bigWig hg19 released antibody characterized with exemption ENCFF096WTD bigWig fold change over control ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF784VQV, ENCFF998NVU 1567214166 ENCODE Processing Pipeline 69b5b6bca76aa056447ad834516ef85b https://www.encodeproject.org/files/ENCFF096WTD/@@download/ENCFF096WTD.bigWig hg19 released antibody characterized with exemption ENCFF585FQF bed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF784VQV 6659834 ENCODE Processing Pipeline 65f50df48778d220b223b40af0ac03ed https://www.encodeproject.org/files/ENCFF585FQF/@@download/ENCFF585FQF.bed.gz hg19 released antibody characterized with exemption ENCFF631RPF bed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF998NVU 6673513 ENCODE Processing Pipeline 297918d1376b90a3232336959e5dfdb3 https://www.encodeproject.org/files/ENCFF631RPF/@@download/ENCFF631RPF.bed.gz hg19 released antibody characterized with exemption ENCFF912JCV bed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF784VQV, ENCFF998NVU 7056312 ENCODE Processing Pipeline 2c7cfb6df07407cd05d27dc8cfafd31d https://www.encodeproject.org/files/ENCFF912JCV/@@download/ENCFF912JCV.bed.gz hg19 released antibody characterized with exemption ENCFF304KOZ bigBed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF585FQF 13283734 ENCODE Processing Pipeline a77686aa5796a58236974d04377f1d2b https://www.encodeproject.org/files/ENCFF304KOZ/@@download/ENCFF304KOZ.bigBed hg19 released antibody characterized with exemption ENCFF817JTL bigBed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF631RPF 13011462 ENCODE Processing Pipeline ee454d43aa413e0b908eec58e6c62bb2 https://www.encodeproject.org/files/ENCFF817JTL/@@download/ENCFF817JTL.bigBed hg19 released antibody characterized with exemption ENCFF660DYB bigBed narrowPeak peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF912JCV 13103155 ENCODE Processing Pipeline ab8dcf130ea3314325dddac5f583c7dd https://www.encodeproject.org/files/ENCFF660DYB/@@download/ENCFF660DYB.bigBed hg19 released antibody characterized with exemption ENCFF003MKA bed narrowPeak conservative idr thresholded peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF585FQF, ENCFF631RPF, ENCFF912JCV 386382 ENCODE Processing Pipeline 3e46ee113c724c7ca0ef8d86e55eaace https://www.encodeproject.org/files/ENCFF003MKA/@@download/ENCFF003MKA.bed.gz hg19 released antibody characterized with exemption ENCFF263PJZ bigBed narrowPeak conservative idr thresholded peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF003MKA 833287 ENCODE Processing Pipeline 3fa69498c28f69ceac1ed2812e434bb2 https://www.encodeproject.org/files/ENCFF263PJZ/@@download/ENCFF263PJZ.bigBed hg19 released antibody characterized with exemption ENCFF858RCV bed narrowPeak optimal idr thresholded peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF585FQF, ENCFF631RPF, ENCFF912JCV 385732 ENCODE Processing Pipeline 219803f44023f2e83c40b5f59d85bc48 https://www.encodeproject.org/files/ENCFF858RCV/@@download/ENCFF858RCV.bed.gz hg19 released antibody characterized with exemption ENCFF918KXJ bigBed narrowPeak optimal idr thresholded peaks ENCSR589SNT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TFE3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF858RCV 832398 ENCODE Processing Pipeline f6206c20bed07f709c1dc7c744d18175 https://www.encodeproject.org/files/ENCFF918KXJ/@@download/ENCFF918KXJ.bigBed hg19 released antibody characterized with exemption ENCFF000OYO bam alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000OYZ 978940315 Richard Myers, HAIB 0e2cca9d03df0cad85ba15ac6495616e https://www.encodeproject.org/files/ENCFF000OYO/@@download/ENCFF000OYO.bam hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000OYP bigBed broadPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UDQ 487328 Richard Myers, HAIB 57e17e6452a013838076241a64ed746a https://www.encodeproject.org/files/ENCFF000OYP/@@download/ENCFF000OYP.bigBed hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000OYQ bigBed broadPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UDR 773182 Richard Myers, HAIB 4e7ee43e628da829b4267fe9b6a058ff https://www.encodeproject.org/files/ENCFF000OYQ/@@download/ENCFF000OYQ.bigBed hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000OYR bam alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000OZC 986211764 Richard Myers, HAIB ca2f4c028ca29186cbe6259a9e0312cf https://www.encodeproject.org/files/ENCFF000OYR/@@download/ENCFF000OYR.bam hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000OYT bigWig raw signal ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 1 72632438 Richard Myers, HAIB 9e10e2024f5c046b2bea74f9ce09beed https://www.encodeproject.org/files/ENCFF000OYT/@@download/ENCFF000OYT.bigWig hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000OYV bigWig raw signal ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 1 110294012 Richard Myers, HAIB a677a8c796b7278c62ad28157c7a7a7b https://www.encodeproject.org/files/ENCFF000OYV/@@download/ENCFF000OYV.bigWig hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000OYZ fastq reads ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1120179005 Richard Myers, HAIB 3db77804a51ad2442fa7b2ccb16f05b0 https://www.encodeproject.org/files/ENCFF000OYZ/@@download/ENCFF000OYZ.fastq.gz HiSeq 2000 /files/ENCFF000PBW/ released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000OZC fastq reads ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 1075148021 Richard Myers, HAIB 0990e3957017a82d717f8ca184b5a983 https://www.encodeproject.org/files/ENCFF000OZC/@@download/ENCFF000OZC.fastq.gz HiSeq 2000 /files/ENCFF000PBY/ released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF001UDQ bed broadPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 1 253129 Richard Myers, HAIB f367e0e8e82a283001ebbf2457ff4781 https://www.encodeproject.org/files/ENCFF001UDQ/@@download/ENCFF001UDQ.bed.gz hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF001UDR bed broadPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 1 506953 Richard Myers, HAIB e3803729abcd5a5e5085a81671070ba8 https://www.encodeproject.org/files/ENCFF001UDR/@@download/ENCFF001UDR.bed.gz hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing derived_from, missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF723HYI bam unfiltered alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000OYZ, ENCFF643CGH 1002567127 ENCODE Processing Pipeline 266d084a9df386005449075c81f06bf6 https://www.encodeproject.org/files/ENCFF723HYI/@@download/ENCFF723HYI.bam GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF044YYR bam unfiltered alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000OYZ, ENCFF807MUK 1001806224 ENCODE Processing Pipeline 2db628b55c13670f4bfb3ec4d0788d05 https://www.encodeproject.org/files/ENCFF044YYR/@@download/ENCFF044YYR.bam hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF652BRJ bam unfiltered alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000OZC, ENCFF807MUK 1042640347 ENCODE Processing Pipeline 05700424ba38c2f911d12877371d123d https://www.encodeproject.org/files/ENCFF652BRJ/@@download/ENCFF652BRJ.bam hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF296CPJ bam alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000OYZ, ENCFF807MUK 370710277 ENCODE Processing Pipeline 979a1213bbf9684170adfe6b1f1e99d8 https://www.encodeproject.org/files/ENCFF296CPJ/@@download/ENCFF296CPJ.bam hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF351MMD bam unfiltered alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000OZC, ENCFF643CGH 1044381561 ENCODE Processing Pipeline 4306c9e324f6949ed557fcf935efeeda https://www.encodeproject.org/files/ENCFF351MMD/@@download/ENCFF351MMD.bam GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF309AXU bam alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 50 ENCFF000OYZ, ENCFF643CGH 370718804 ENCODE Processing Pipeline 58144ff3c7213e7b81041b541ba12be5 https://www.encodeproject.org/files/ENCFF309AXU/@@download/ENCFF309AXU.bam GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF555MNQ bam alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000OZC, ENCFF807MUK 613893602 ENCODE Processing Pipeline 320c6e316485bbbf6bec3bb2b2ade034 https://www.encodeproject.org/files/ENCFF555MNQ/@@download/ENCFF555MNQ.bam hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF014MZL bam alignments ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 50 ENCFF000OZC, ENCFF643CGH 613928215 ENCODE Processing Pipeline 486f637776c042a5b811e03c07d1fabf https://www.encodeproject.org/files/ENCFF014MZL/@@download/ENCFF014MZL.bam GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF853IQV bigWig signal p-value ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF296CPJ, ENCFF831FMU 300998292 ENCODE Processing Pipeline 1d907c7a2260f0c2b352bd44758da535 https://www.encodeproject.org/files/ENCFF853IQV/@@download/ENCFF853IQV.bigWig hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF431ENU bigWig fold change over control ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF296CPJ, ENCFF831FMU 183442371 ENCODE Processing Pipeline 624acb57343e8548d6e5cba17bf08069 https://www.encodeproject.org/files/ENCFF431ENU/@@download/ENCFF431ENU.bigWig hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF904SWH bigWig signal p-value ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF555MNQ, ENCFF622MSR 357366357 ENCODE Processing Pipeline 9ecda555155f2b13a7f41bfe1f545b9c https://www.encodeproject.org/files/ENCFF904SWH/@@download/ENCFF904SWH.bigWig hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF534GNR bigWig signal p-value ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF296CPJ, ENCFF555MNQ, ENCFF622MSR, ENCFF831FMU 637975998 ENCODE Processing Pipeline ae1881ec1dece24d9e5d6a669e3f62a2 https://www.encodeproject.org/files/ENCFF534GNR/@@download/ENCFF534GNR.bigWig hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF139HRW bigWig fold change over control ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF555MNQ, ENCFF622MSR 286010967 ENCODE Processing Pipeline 233b885dbdaa88fb39f28b200c1324fc https://www.encodeproject.org/files/ENCFF139HRW/@@download/ENCFF139HRW.bigWig hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF021YGW bigWig fold change over control ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF296CPJ, ENCFF555MNQ, ENCFF622MSR, ENCFF831FMU 528071706 ENCODE Processing Pipeline fa4044ad9f4ed1d129c7260d6cf83970 https://www.encodeproject.org/files/ENCFF021YGW/@@download/ENCFF021YGW.bigWig hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF946JHX bigWig signal p-value ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF309AXU 340115330 ENCODE Processing Pipeline 5d7cf027d3a64a66fb47353367e76aae https://www.encodeproject.org/files/ENCFF946JHX/@@download/ENCFF946JHX.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF956JHX bigWig fold change over control ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF309AXU 183434151 ENCODE Processing Pipeline 81d4fdba1cd796d120edb8cacd81500b https://www.encodeproject.org/files/ENCFF956JHX/@@download/ENCFF956JHX.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF234IZR bigWig signal p-value ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF014MZL 440192262 ENCODE Processing Pipeline 7c9fa5dad334d69af361b762baac226a https://www.encodeproject.org/files/ENCFF234IZR/@@download/ENCFF234IZR.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF142PEQ bigWig fold change over control ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF014MZL, ENCFF309AXU 532144267 ENCODE Processing Pipeline c0ec7c220c309bd77295b3ccf5a60235 https://www.encodeproject.org/files/ENCFF142PEQ/@@download/ENCFF142PEQ.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF568ZRW bigWig signal p-value ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF014MZL, ENCFF309AXU 654875629 ENCODE Processing Pipeline c6730161682e31a77555f1a01c611fb6 https://www.encodeproject.org/files/ENCFF568ZRW/@@download/ENCFF568ZRW.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF621VHH bigWig fold change over control ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF014MZL 284889558 ENCODE Processing Pipeline 610165660e3365e23ac4989e3e1cbdd8 https://www.encodeproject.org/files/ENCFF621VHH/@@download/ENCFF621VHH.bigWig GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF214AAT bed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF555MNQ, ENCFF622MSR 4828973 ENCODE Processing Pipeline 7493298ac1ae24dc05127a63c9198348 https://www.encodeproject.org/files/ENCFF214AAT/@@download/ENCFF214AAT.bed.gz hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF154TPN bed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF014MZL 4827891 ENCODE Processing Pipeline c67327a40bfb164f2d32fe135df0ced3 https://www.encodeproject.org/files/ENCFF154TPN/@@download/ENCFF154TPN.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF021NMZ bed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF296CPJ, ENCFF831FMU 2565552 ENCODE Processing Pipeline 98f67bb8cf3d192bc3750f98903272a1 https://www.encodeproject.org/files/ENCFF021NMZ/@@download/ENCFF021NMZ.bed.gz hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF025FOL bigBed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF154TPN 10603349 ENCODE Processing Pipeline 139178082a61e4d4c98de72451061a76 https://www.encodeproject.org/files/ENCFF025FOL/@@download/ENCFF025FOL.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF467HOK bigBed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF971PWB 11187434 ENCODE Processing Pipeline bdb6a422a0cd54ec97f4ae5a6fac9e84 https://www.encodeproject.org/files/ENCFF467HOK/@@download/ENCFF467HOK.bigBed hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF106KMI bigBed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF021NMZ 6032304 ENCODE Processing Pipeline bad4ada99c797f5bb527544e1c1d3f54 https://www.encodeproject.org/files/ENCFF106KMI/@@download/ENCFF106KMI.bigBed hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF971PWB bed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF296CPJ, ENCFF555MNQ, ENCFF622MSR, ENCFF831FMU 5247353 ENCODE Processing Pipeline eda6345b12dd5704348f9d8ffc5485fb https://www.encodeproject.org/files/ENCFF971PWB/@@download/ENCFF971PWB.bed.gz hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF568STA bed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF309AXU 2566184 ENCODE Processing Pipeline a513dea1e4e6c6c9d3e8b0b4f32f9a68 https://www.encodeproject.org/files/ENCFF568STA/@@download/ENCFF568STA.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF550EQQ bed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF014MZL, ENCFF309AXU 5204446 ENCODE Processing Pipeline 9ed3741025efcd0c2d2156912177cf1c https://www.encodeproject.org/files/ENCFF550EQQ/@@download/ENCFF550EQQ.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF617JSF bigBed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1 ENCFF568STA 5979347 ENCODE Processing Pipeline 7b79176f8863296e9e70435a77eae8ec https://www.encodeproject.org/files/ENCFF617JSF/@@download/ENCFF617JSF.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF876DLC bigBed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF550EQQ 11174996 ENCODE Processing Pipeline 53eb7ad5a3757a0d341a937af459d507 https://www.encodeproject.org/files/ENCFF876DLC/@@download/ENCFF876DLC.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF056ESE bed narrowPeak conservative idr thresholded peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF154TPN, ENCFF419RSJ, ENCFF550EQQ, ENCFF568STA 510872 ENCODE Processing Pipeline c8afb24f1412c9792e2a5c8a7525c54a https://www.encodeproject.org/files/ENCFF056ESE/@@download/ENCFF056ESE.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF594ZJG bigBed narrowPeak peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 2 ENCFF214AAT 10596636 ENCODE Processing Pipeline fc710c154922cdb4051991e0ca9e27c3 https://www.encodeproject.org/files/ENCFF594ZJG/@@download/ENCFF594ZJG.bigBed hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF728UAB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF056ESE 957116 ENCODE Processing Pipeline 0d404a94abdd2b149505ab16189494e3 https://www.encodeproject.org/files/ENCFF728UAB/@@download/ENCFF728UAB.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF025JZZ bed narrowPeak conservative idr thresholded peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF021NMZ, ENCFF214AAT, ENCFF971PWB 511023 ENCODE Processing Pipeline e8fac38b6ad6643f1a5b4c272eef0abf https://www.encodeproject.org/files/ENCFF025JZZ/@@download/ENCFF025JZZ.bed.gz hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF549PGC bed narrowPeak optimal idr thresholded peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF154TPN, ENCFF419RSJ, ENCFF550EQQ, ENCFF568STA 598467 ENCODE Processing Pipeline 713f58a6497a9168a326123919672ebe https://www.encodeproject.org/files/ENCFF549PGC/@@download/ENCFF549PGC.bed.gz GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF272GUU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF025JZZ 954980 ENCODE Processing Pipeline 80d6ef792d23c3306156968eba962761 https://www.encodeproject.org/files/ENCFF272GUU/@@download/ENCFF272GUU.bigBed hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF927TJR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF549PGC 1074755 ENCODE Processing Pipeline 50e8f08fa98f6b3df85d63ab6ebb0fb5 https://www.encodeproject.org/files/ENCFF927TJR/@@download/ENCFF927TJR.bigBed GRCh38 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF917ZPO bed narrowPeak optimal idr thresholded peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF021NMZ, ENCFF214AAT, ENCFF971PWB 602672 ENCODE Processing Pipeline eb204541dbdac5aa54d530917f198a18 https://www.encodeproject.org/files/ENCFF917ZPO/@@download/ENCFF917ZPO.bed.gz hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF239EKP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BSE ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF917ZPO 1078942 ENCODE Processing Pipeline 728705974bd32ce7aeda7b545712c46e https://www.encodeproject.org/files/ENCFF239EKP/@@download/ENCFF239EKP.bigBed hg19 released moderate library complexity, borderline replicate concordance, mild to moderate bottlenecking, low read depth missing unfiltered alignments, biological replicates with identical biosample insufficient read depth ENCFF000QBV bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QCH 929318144 Richard Myers, HAIB 1ac6a90d503c9f43ffacc3e89cef2018 https://www.encodeproject.org/files/ENCFF000QBV/@@download/ENCFF000QBV.bam hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QBW bigBed broadPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKJ 147644 Richard Myers, HAIB 50a8b82b5b28db9a749615a33e5ead74 https://www.encodeproject.org/files/ENCFF000QBW/@@download/ENCFF000QBW.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QBX bigBed broadPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKK 99120 Richard Myers, HAIB 3eeae5cbd93a9f12899496e575ae11a5 https://www.encodeproject.org/files/ENCFF000QBX/@@download/ENCFF000QBX.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QBY bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QCI 939378828 Richard Myers, HAIB a266c60190e675da7486c198fb399731 https://www.encodeproject.org/files/ENCFF000QBY/@@download/ENCFF000QBY.bam hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QCA bigWig raw signal ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 9471778 Richard Myers, HAIB 1eecece538266147deeccdbb6b97b2b1 https://www.encodeproject.org/files/ENCFF000QCA/@@download/ENCFF000QCA.bigWig hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QCB bigWig raw signal ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 14353153 Richard Myers, HAIB 4ee965248ae40abc2a102298abaf37b5 https://www.encodeproject.org/files/ENCFF000QCB/@@download/ENCFF000QCB.bigWig hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QCH fastq reads ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 803468681 Richard Myers, HAIB 1fe2435122aa9395cf49bdc61c49a2ed https://www.encodeproject.org/files/ENCFF000QCH/@@download/ENCFF000QCH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QCI fastq reads ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 927569797 Richard Myers, HAIB fd076189e618f7512b0bd0a4bbaf437c https://www.encodeproject.org/files/ENCFF000QCI/@@download/ENCFF000QCI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF001UKJ bed broadPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 54276 Richard Myers, HAIB 385c3b1e1b57faeff565b0cebb7e4638 https://www.encodeproject.org/files/ENCFF001UKJ/@@download/ENCFF001UKJ.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF001UKK bed broadPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 36858 Richard Myers, HAIB 065c8bd750bdd207882bb6023e2930d1 https://www.encodeproject.org/files/ENCFF001UKK/@@download/ENCFF001UKK.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CMD bed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 131373 ENCODE Consortium Analysis Working Group 86f7faf8431745bababf549e8455935e https://www.encodeproject.org/files/ENCFF002CMD/@@download/ENCFF002CMD.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF874UPP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE ENCFF002CMD 316067 ENCODE Consortium d1c17137874e0c15d5eeed78f7661eca https://www.encodeproject.org/files/ENCFF874UPP/@@download/ENCFF874UPP.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF913CDO bam unfiltered alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCH, ENCFF643CGH 1138271473 ENCODE Processing Pipeline c250dfe5e897156f62be16b1e396cd2b https://www.encodeproject.org/files/ENCFF913CDO/@@download/ENCFF913CDO.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF850FRG bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCI, ENCFF643CGH 552219646 ENCODE Processing Pipeline 0dc27eaceb709b62302b71dc68fa45a6 https://www.encodeproject.org/files/ENCFF850FRG/@@download/ENCFF850FRG.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF401BQM bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCH, ENCFF643CGH 670034925 ENCODE Processing Pipeline 8c1cd145a568534df20e1a7f327813fa https://www.encodeproject.org/files/ENCFF401BQM/@@download/ENCFF401BQM.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF573SUC bam unfiltered alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCI, ENCFF643CGH 1118480056 ENCODE Processing Pipeline cc91354d82562aa351232eecf99b6dda https://www.encodeproject.org/files/ENCFF573SUC/@@download/ENCFF573SUC.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF773RUT bam unfiltered alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCI, ENCFF807MUK 1116294733 ENCODE Processing Pipeline a0256c6b2cf63603cfcfd82a5f84a59a https://www.encodeproject.org/files/ENCFF773RUT/@@download/ENCFF773RUT.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF037JQU bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCI, ENCFF807MUK 552548472 ENCODE Processing Pipeline d0955d8d02d49f9673794d0d352e6997 https://www.encodeproject.org/files/ENCFF037JQU/@@download/ENCFF037JQU.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF700OGN bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCH, ENCFF807MUK 670422920 ENCODE Processing Pipeline cfe483c267d3277c8da141e6e9d022bf https://www.encodeproject.org/files/ENCFF700OGN/@@download/ENCFF700OGN.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF893HCG bam unfiltered alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCH, ENCFF807MUK 1134640809 ENCODE Processing Pipeline e94d259dc7c64cee03689126a6101300 https://www.encodeproject.org/files/ENCFF893HCG/@@download/ENCFF893HCG.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF669MIP bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401BQM 187738185 ENCODE Processing Pipeline 2602fc6813343908f10750826b7a1527 https://www.encodeproject.org/files/ENCFF669MIP/@@download/ENCFF669MIP.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF852UFU bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF850FRG 207220442 ENCODE Processing Pipeline 82c62e018d0a3feeb8424ec8d450cccd https://www.encodeproject.org/files/ENCFF852UFU/@@download/ENCFF852UFU.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF103BUT bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF401BQM, ENCFF850FRG 193232655 ENCODE Processing Pipeline 1c2cd14e575898deecbc30b7efcc715b https://www.encodeproject.org/files/ENCFF103BUT/@@download/ENCFF103BUT.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF086VZQ bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401BQM 288713465 ENCODE Processing Pipeline 7c60db026e7034a2a9838707cd5689d5 https://www.encodeproject.org/files/ENCFF086VZQ/@@download/ENCFF086VZQ.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF396TQD bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF850FRG 215926903 ENCODE Processing Pipeline fa6092b4a63572b7db120689f6b112c4 https://www.encodeproject.org/files/ENCFF396TQD/@@download/ENCFF396TQD.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF072MKT bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF401BQM, ENCFF850FRG 457373805 ENCODE Processing Pipeline d2212d8930210ac63e01cd7f5d7079c6 https://www.encodeproject.org/files/ENCFF072MKT/@@download/ENCFF072MKT.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF862SVA bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF401BQM, ENCFF850FRG 4334858 ENCODE Processing Pipeline 3498eb36e5e5745bbec797ed1ea4320d https://www.encodeproject.org/files/ENCFF862SVA/@@download/ENCFF862SVA.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF190IHG bed narrowPeak conservative idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184QHH, ENCFF419RSJ, ENCFF862SVA, ENCFF894NFM 16950 ENCODE Processing Pipeline 15ab24e07bb44b0eb0172d59308cb5f2 https://www.encodeproject.org/files/ENCFF190IHG/@@download/ENCFF190IHG.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF184QHH bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF850FRG 178380 ENCODE Processing Pipeline d35d70f9aa74853e1f345537054d9f28 https://www.encodeproject.org/files/ENCFF184QHH/@@download/ENCFF184QHH.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF894NFM bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401BQM 128973 ENCODE Processing Pipeline 4b35f34c99006cc3973d8555e0f4eed1 https://www.encodeproject.org/files/ENCFF894NFM/@@download/ENCFF894NFM.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF103BVY bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF894NFM 294515 ENCODE Processing Pipeline 73105cb88df513d1e79bae74c1c8c7b4 https://www.encodeproject.org/files/ENCFF103BVY/@@download/ENCFF103BVY.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF950NDS bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF862SVA 10533388 ENCODE Processing Pipeline 1c88f0cb444c80504e8a1ebe746ab353 https://www.encodeproject.org/files/ENCFF950NDS/@@download/ENCFF950NDS.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF481IRF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF190IHG 66789 ENCODE Processing Pipeline 91b1c06771934e0dbc76d1083470f0b3 https://www.encodeproject.org/files/ENCFF481IRF/@@download/ENCFF481IRF.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF556HYW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310SMW 89335 ENCODE Processing Pipeline f3a4e4678d20c1c250659a3b0f208f97 https://www.encodeproject.org/files/ENCFF556HYW/@@download/ENCFF556HYW.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF310SMW bed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184QHH, ENCFF419RSJ, ENCFF862SVA, ENCFF894NFM 23534 ENCODE Processing Pipeline e967915ab5610d1d6ed4def309ca49c1 https://www.encodeproject.org/files/ENCFF310SMW/@@download/ENCFF310SMW.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF177RIM bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF184QHH 452850 ENCODE Processing Pipeline e63c082da332c38b93a5a7d625308427 https://www.encodeproject.org/files/ENCFF177RIM/@@download/ENCFF177RIM.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000OGB bam alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OGQ 792319278 Richard Myers, HAIB 67e9808b399532c01630db145a565521 https://www.encodeproject.org/files/ENCFF000OGB/@@download/ENCFF000OGB.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OGD bigBed broadPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZI 822061 Richard Myers, HAIB d3d860935cfa9f8ed7b6b28e5f615353 https://www.encodeproject.org/files/ENCFF000OGD/@@download/ENCFF000OGD.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OGE bigBed broadPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZJ 635602 Richard Myers, HAIB 575cb826cade0e811f676ac8865d9de5 https://www.encodeproject.org/files/ENCFF000OGE/@@download/ENCFF000OGE.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OGF bam alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OGN 820790488 Richard Myers, HAIB 1b6def9e8e72152e8350406f9314ac2b https://www.encodeproject.org/files/ENCFF000OGF/@@download/ENCFF000OGF.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OGG bigWig raw signal ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 30194563 Richard Myers, HAIB 01ede430aac7c1e7f969ecdb4e83e63b https://www.encodeproject.org/files/ENCFF000OGG/@@download/ENCFF000OGG.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OGI bigWig raw signal ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 19316080 Richard Myers, HAIB 282960b8cac6321a40183e53ac4a57c9 https://www.encodeproject.org/files/ENCFF000OGI/@@download/ENCFF000OGI.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000OGN fastq reads ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 828504672 Richard Myers, HAIB 4ec5c632100728caab7e175b16631bbf https://www.encodeproject.org/files/ENCFF000OGN/@@download/ENCFF000OGN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000OGQ fastq reads ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1032108981 Richard Myers, HAIB a27bb1ed7df4356debf9ecf49032117c https://www.encodeproject.org/files/ENCFF000OGQ/@@download/ENCFF000OGQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TZI bed broadPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 1 540658 Richard Myers, HAIB ba4995bf149ee17acb834557bc569e36 https://www.encodeproject.org/files/ENCFF001TZI/@@download/ENCFF001TZI.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TZJ bed broadPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 1 375898 Richard Myers, HAIB f1181b77b5074e3124fc989d4287f0cf https://www.encodeproject.org/files/ENCFF001TZJ/@@download/ENCFF001TZJ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CHZ bed narrowPeak optimal idr thresholded peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 395086 ENCODE Consortium Analysis Working Group 872fa752845c6d02b3cb1d6ca221bf1f https://www.encodeproject.org/files/ENCFF002CHZ/@@download/ENCFF002CHZ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF709EWV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE ENCFF002CHZ 874998 ENCODE Consortium 8116c50b3b0b87ab4bd9d8ec2b15d90a https://www.encodeproject.org/files/ENCFF709EWV/@@download/ENCFF709EWV.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF136IUN bam unfiltered alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OGQ, ENCFF643CGH 1264329142 ENCODE Processing Pipeline 4d8a2285a7ee4e8b3579ddd8047cf722 https://www.encodeproject.org/files/ENCFF136IUN/@@download/ENCFF136IUN.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF101LKK bam alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OGQ, ENCFF643CGH 532824893 ENCODE Processing Pipeline 74b843c4f46349b000a06dd94edc8cfb https://www.encodeproject.org/files/ENCFF101LKK/@@download/ENCFF101LKK.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF291PCM bam alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OGN, ENCFF643CGH 650554870 ENCODE Processing Pipeline 9381f9d76c2b11ead61f24eab4aab760 https://www.encodeproject.org/files/ENCFF291PCM/@@download/ENCFF291PCM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF713RPY bam unfiltered alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OGN, ENCFF643CGH 1072184432 ENCODE Processing Pipeline b5f1615e2e8782d9f6dead86530ca24f https://www.encodeproject.org/files/ENCFF713RPY/@@download/ENCFF713RPY.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF208RHL bam alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OGQ, ENCFF807MUK 532468255 ENCODE Processing Pipeline 065b8e34bfdb60de3d20275dbd23fa91 https://www.encodeproject.org/files/ENCFF208RHL/@@download/ENCFF208RHL.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF874QHT bam unfiltered alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OGQ, ENCFF807MUK 1261345062 ENCODE Processing Pipeline a403f3e32a56a4e13677b243c32f1849 https://www.encodeproject.org/files/ENCFF874QHT/@@download/ENCFF874QHT.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF766QXX bam unfiltered alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OGN, ENCFF807MUK 1069286831 ENCODE Processing Pipeline 5f2cab5088738e98f2548898dcc07724 https://www.encodeproject.org/files/ENCFF766QXX/@@download/ENCFF766QXX.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF404XBY bam alignments ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OGN, ENCFF807MUK 645855411 ENCODE Processing Pipeline 07d739cd1033e6c6ed6602cb95f7d507 https://www.encodeproject.org/files/ENCFF404XBY/@@download/ENCFF404XBY.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF064KJG bigWig signal p-value ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF101LKK, ENCFF562HPN 511887188 ENCODE Processing Pipeline 176dc53c53de7fdfed7bd67888728c50 https://www.encodeproject.org/files/ENCFF064KJG/@@download/ENCFF064KJG.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF529XRP bigWig signal p-value ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF291PCM, ENCFF438FFV 418579808 ENCODE Processing Pipeline 9d86f961ad7bd0f93695ec6337572510 https://www.encodeproject.org/files/ENCFF529XRP/@@download/ENCFF529XRP.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF150DMC bigWig fold change over control ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF101LKK, ENCFF562HPN 236373892 ENCODE Processing Pipeline ebb8d7cd25bad8f43093798b0da2b148 https://www.encodeproject.org/files/ENCFF150DMC/@@download/ENCFF150DMC.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF990QOO bigWig signal p-value ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF101LKK, ENCFF291PCM, ENCFF438FFV, ENCFF562HPN 741465876 ENCODE Processing Pipeline dd7067538897be10485fe1bcf80d739f https://www.encodeproject.org/files/ENCFF990QOO/@@download/ENCFF990QOO.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF126FJP bigWig fold change over control ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF291PCM, ENCFF438FFV 267111452 ENCODE Processing Pipeline c7515aa5be910a7e925a8f462c2236cc https://www.encodeproject.org/files/ENCFF126FJP/@@download/ENCFF126FJP.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF481DWO bigWig fold change over control ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF101LKK, ENCFF291PCM, ENCFF438FFV, ENCFF562HPN 595686172 ENCODE Processing Pipeline 14131580c86854f071e4feb435b5550a https://www.encodeproject.org/files/ENCFF481DWO/@@download/ENCFF481DWO.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF812GBT bed narrowPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF101LKK, ENCFF562HPN 4506878 ENCODE Processing Pipeline 4549e771a064f914cea14014408e184d https://www.encodeproject.org/files/ENCFF812GBT/@@download/ENCFF812GBT.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF875ULM bed narrowPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF291PCM, ENCFF438FFV 4572538 ENCODE Processing Pipeline fe487be9d37d9680a1b3693d96f7ab0c https://www.encodeproject.org/files/ENCFF875ULM/@@download/ENCFF875ULM.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF503SNB bed narrowPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF101LKK, ENCFF291PCM, ENCFF438FFV, ENCFF562HPN 5734784 ENCODE Processing Pipeline 2badee84cdd69119a51572cfefd82bae https://www.encodeproject.org/files/ENCFF503SNB/@@download/ENCFF503SNB.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF755SOA bigBed narrowPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF503SNB 13496827 ENCODE Processing Pipeline b8ab8ce6c8d4d67349ca04c1b1551fa0 https://www.encodeproject.org/files/ENCFF755SOA/@@download/ENCFF755SOA.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF176ILA bed narrowPeak conservative idr thresholded peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF503SNB, ENCFF812GBT, ENCFF875ULM 389410 ENCODE Processing Pipeline f7630a6310961c25cd50f5a644fbdab8 https://www.encodeproject.org/files/ENCFF176ILA/@@download/ENCFF176ILA.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF210DFF bigBed narrowPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF812GBT 10242221 ENCODE Processing Pipeline fbfa9b947a1b8fd3e34c5c0272490863 https://www.encodeproject.org/files/ENCFF210DFF/@@download/ENCFF210DFF.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF068NGM bigBed narrowPeak peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF875ULM 10619825 ENCODE Processing Pipeline b90a14d0af554f78e4ef742dc4e8c696 https://www.encodeproject.org/files/ENCFF068NGM/@@download/ENCFF068NGM.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF768VSH bed narrowPeak optimal idr thresholded peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF503SNB, ENCFF812GBT, ENCFF875ULM 457695 ENCODE Processing Pipeline 9edaafcabc15b0befeed308e57dffb37 https://www.encodeproject.org/files/ENCFF768VSH/@@download/ENCFF768VSH.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF855GNR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF176ILA 711529 ENCODE Processing Pipeline 75ae222188decdf5c50a1356e4c70908 https://www.encodeproject.org/files/ENCFF855GNR/@@download/ENCFF855GNR.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF525ZKB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGZ ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens TCF12-human ENCAB000ALT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF768VSH 969626 ENCODE Processing Pipeline dd9f21376104ce049407b079d62b9185 https://www.encodeproject.org/files/ENCFF525ZKB/@@download/ENCFF525ZKB.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF934JOM fastq reads ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1449056550 Richard Myers, HAIB e312f5da1204ee931900d3bfbfbfaa44 SRA:SRR5339683 https://www.encodeproject.org/files/ENCFF934JOM/@@download/ENCFF934JOM.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released antibody characterized with exemption biological replicates with identical biosample ENCFF546JVU fastq reads ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1443724703 Richard Myers, HAIB 4766b732e6775074e8c9b3a7e6a75d64 SRA:SRR5339682 https://www.encodeproject.org/files/ENCFF546JVU/@@download/ENCFF546JVU.fastq.gz HiSeq 2000 /files/ENCFF958NMQ/ released antibody characterized with exemption biological replicates with identical biosample ENCFF716ZAN bam unfiltered alignments ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 50 ENCFF546JVU, ENCFF643CGH 1655187051 ENCODE Processing Pipeline 77fa1a3e7a8f8d1f2d5366698cf334f5 https://www.encodeproject.org/files/ENCFF716ZAN/@@download/ENCFF716ZAN.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF935CYM bam unfiltered alignments ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF934JOM 1624763436 ENCODE Processing Pipeline b661193afd7a9bf765791351ed0979ec https://www.encodeproject.org/files/ENCFF935CYM/@@download/ENCFF935CYM.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF661JYQ bam alignments ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF934JOM 1237242463 ENCODE Processing Pipeline 9e3a064b96c7a768b5b8032afba6befe https://www.encodeproject.org/files/ENCFF661JYQ/@@download/ENCFF661JYQ.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF777LFU bam alignments ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 50 ENCFF546JVU, ENCFF643CGH 1241469842 ENCODE Processing Pipeline 9977e4aaeb153437bf677a64c1317c64 https://www.encodeproject.org/files/ENCFF777LFU/@@download/ENCFF777LFU.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF793NUR bigWig signal p-value ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF777LFU, ENCFF995OIG 1034532994 ENCODE Processing Pipeline 8878e63dc3869b63884d9dd2565734cb https://www.encodeproject.org/files/ENCFF793NUR/@@download/ENCFF793NUR.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF639QYL bigWig signal p-value ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF661JYQ, ENCFF995OIG 988951786 ENCODE Processing Pipeline 6000b39fe032bcaedbaab608002cf135 https://www.encodeproject.org/files/ENCFF639QYL/@@download/ENCFF639QYL.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF076MZM bigWig signal p-value ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF661JYQ, ENCFF777LFU, ENCFF995OIG 1370838950 ENCODE Processing Pipeline a9464639d8b301f3417be219a6e25512 https://www.encodeproject.org/files/ENCFF076MZM/@@download/ENCFF076MZM.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF617PAE bigWig fold change over control ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF777LFU, ENCFF995OIG 937441652 ENCODE Processing Pipeline 48c969f11013d8fa79387f2b2fb15876 https://www.encodeproject.org/files/ENCFF617PAE/@@download/ENCFF617PAE.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF348WKR bigWig fold change over control ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF661JYQ, ENCFF995OIG 958506200 ENCODE Processing Pipeline a625cf907906433a87c05809220bce9a https://www.encodeproject.org/files/ENCFF348WKR/@@download/ENCFF348WKR.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF305OHM bed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF370PSF, ENCFF661JYQ, ENCFF995OIG 6470150 ENCODE Processing Pipeline bb876c221c6c7259bf31fa94c3d20bbc https://www.encodeproject.org/files/ENCFF305OHM/@@download/ENCFF305OHM.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF598JFL bigBed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF327VVW 13499932 ENCODE Processing Pipeline b88596c72b22da88efe9bff5781f26a6 https://www.encodeproject.org/files/ENCFF598JFL/@@download/ENCFF598JFL.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF138OAF bed narrowPeak conservative idr thresholded peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF305OHM, ENCFF327VVW, ENCFF392UBG, ENCFF419RSJ 502296 ENCODE Processing Pipeline a7adce214a78431210ab18723e62ffa2 https://www.encodeproject.org/files/ENCFF138OAF/@@download/ENCFF138OAF.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF964SBO bigWig fold change over control ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF661JYQ, ENCFF777LFU, ENCFF995OIG 1407827782 ENCODE Processing Pipeline 7ee769840cc711ee45a2bed3ffab8470 https://www.encodeproject.org/files/ENCFF964SBO/@@download/ENCFF964SBO.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF204LQH bigBed narrowPeak conservative idr thresholded peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF138OAF 984879 ENCODE Processing Pipeline 97f334833c6e56e20c6941a9c69905c0 https://www.encodeproject.org/files/ENCFF204LQH/@@download/ENCFF204LQH.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF493ZMX bed narrowPeak optimal idr thresholded peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF305OHM, ENCFF327VVW, ENCFF392UBG, ENCFF419RSJ 548527 ENCODE Processing Pipeline 6e2ac0318546b631d9cd9d0ddb90dd48 https://www.encodeproject.org/files/ENCFF493ZMX/@@download/ENCFF493ZMX.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF367CVU bigBed narrowPeak optimal idr thresholded peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF493ZMX 1057438 ENCODE Processing Pipeline 5843195d13c04ecf6fb7349a0ed67e50 https://www.encodeproject.org/files/ENCFF367CVU/@@download/ENCFF367CVU.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF392UBG bed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF370PSF, ENCFF661JYQ, ENCFF777LFU, ENCFF995OIG 6946208 ENCODE Processing Pipeline 5a3c4bc5fc87620388fa673eeb2fbe12 https://www.encodeproject.org/files/ENCFF392UBG/@@download/ENCFF392UBG.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF138RLS bigBed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF305OHM 13441484 ENCODE Processing Pipeline 8331cb434709b51ade2db9ba87a9b30c https://www.encodeproject.org/files/ENCFF138RLS/@@download/ENCFF138RLS.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF327VVW bed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF777LFU, ENCFF995OIG 6434683 ENCODE Processing Pipeline d9e4858105871021cef0ff283ab5bb67 https://www.encodeproject.org/files/ENCFF327VVW/@@download/ENCFF327VVW.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF913DUU bigBed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF392UBG 13405018 ENCODE Processing Pipeline 702e75d9cec3d799b0fa4bd809601d5d https://www.encodeproject.org/files/ENCFF913DUU/@@download/ENCFF913DUU.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF520IDM bam alignments ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF934JOM 1237165199 ENCODE Processing Pipeline b054e86b0ddfe0b4d1360e0f4162a5ab https://www.encodeproject.org/files/ENCFF520IDM/@@download/ENCFF520IDM.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF668CFX bam alignments ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 50 ENCFF546JVU, ENCFF807MUK 1241365854 ENCODE Processing Pipeline 9fc9d9da441a31a5e9e35fc3ec476599 https://www.encodeproject.org/files/ENCFF668CFX/@@download/ENCFF668CFX.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF120PRI bam unfiltered alignments ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 50 ENCFF546JVU, ENCFF807MUK 1646956624 ENCODE Processing Pipeline b34b6c7b255d2f5fb98bbdb3a1bea761 https://www.encodeproject.org/files/ENCFF120PRI/@@download/ENCFF120PRI.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF536MMC bam unfiltered alignments ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF934JOM 1616741636 ENCODE Processing Pipeline b9b6282d142d24041e8b54ed1aa3e434 https://www.encodeproject.org/files/ENCFF536MMC/@@download/ENCFF536MMC.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF492YSU bigWig signal p-value ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF654EHF, ENCFF668CFX, ENCFF991UTU 1001245241 ENCODE Processing Pipeline 9f3567da68199bd18a870a6a624858ba https://www.encodeproject.org/files/ENCFF492YSU/@@download/ENCFF492YSU.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF804BST bigWig signal p-value ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF520IDM, ENCFF654EHF, ENCFF991UTU 1106811027 ENCODE Processing Pipeline e23c28a58430e14a25509897dc200c23 https://www.encodeproject.org/files/ENCFF804BST/@@download/ENCFF804BST.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF116HWO bigWig signal p-value ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF520IDM, ENCFF654EHF, ENCFF668CFX, ENCFF991UTU 1167675681 ENCODE Processing Pipeline e1ce55cd3419e4c01023012c779b42ae https://www.encodeproject.org/files/ENCFF116HWO/@@download/ENCFF116HWO.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF776UCD bigWig fold change over control ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF520IDM, ENCFF654EHF, ENCFF991UTU 938831503 ENCODE Processing Pipeline 21ae022f1c81869a8ff64b79c4246f57 https://www.encodeproject.org/files/ENCFF776UCD/@@download/ENCFF776UCD.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF120ODV bigWig fold change over control ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF654EHF, ENCFF668CFX, ENCFF991UTU 875555441 ENCODE Processing Pipeline 8109672ebd86c805bf20bf6d7b7c693c https://www.encodeproject.org/files/ENCFF120ODV/@@download/ENCFF120ODV.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF151FBW bed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF654EHF, ENCFF668CFX, ENCFF991UTU 6402451 ENCODE Processing Pipeline 84f3ade497df8a9e049d1fd7c1295c5b https://www.encodeproject.org/files/ENCFF151FBW/@@download/ENCFF151FBW.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF810FLM bed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF520IDM, ENCFF654EHF, ENCFF991UTU 6491970 ENCODE Processing Pipeline e3e312be3c9440fd1362b9698a943da2 https://www.encodeproject.org/files/ENCFF810FLM/@@download/ENCFF810FLM.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF981QWW bed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF520IDM, ENCFF654EHF, ENCFF668CFX, ENCFF991UTU 6973620 ENCODE Processing Pipeline a4abc862fc32797ca322d2e6e88da034 https://www.encodeproject.org/files/ENCFF981QWW/@@download/ENCFF981QWW.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF267DOX bigBed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1 ENCFF151FBW 13419292 ENCODE Processing Pipeline e2535946c20ddb0151963d2c9c64126f https://www.encodeproject.org/files/ENCFF267DOX/@@download/ENCFF267DOX.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF370ZNN bigWig fold change over control ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF520IDM, ENCFF654EHF, ENCFF668CFX, ENCFF991UTU 1386499166 ENCODE Processing Pipeline b62c65b866d5885a8df9e5c834a098fd https://www.encodeproject.org/files/ENCFF370ZNN/@@download/ENCFF370ZNN.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF399DQN bed narrowPeak conservative idr thresholded peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF151FBW, ENCFF810FLM, ENCFF981QWW 515748 ENCODE Processing Pipeline 370f4f95255ab335de9e222e2507b323 https://www.encodeproject.org/files/ENCFF399DQN/@@download/ENCFF399DQN.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF739RMG bigBed narrowPeak optimal idr thresholded peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF840NOO 1054469 ENCODE Processing Pipeline 2999346315758828a72970969f82fdc7 https://www.encodeproject.org/files/ENCFF739RMG/@@download/ENCFF739RMG.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF897PXN bigBed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 2 ENCFF810FLM 13460648 ENCODE Processing Pipeline f0a3d2db3f2323c64ecbb6b99441bb2b https://www.encodeproject.org/files/ENCFF897PXN/@@download/ENCFF897PXN.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF251WLF bigBed narrowPeak peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF981QWW 13439472 ENCODE Processing Pipeline a4ce8aafcede81c7b0221dbb219dbade https://www.encodeproject.org/files/ENCFF251WLF/@@download/ENCFF251WLF.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF485QTO bigBed narrowPeak conservative idr thresholded peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF399DQN 1001550 ENCODE Processing Pipeline 784c8710209e187aa0f495bf47ac7236 https://www.encodeproject.org/files/ENCFF485QTO/@@download/ENCFF485QTO.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF840NOO bed narrowPeak optimal idr thresholded peaks ENCSR847DIT ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens MAX-human ENCAB000AIL DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF151FBW, ENCFF810FLM, ENCFF981QWW 547666 ENCODE Processing Pipeline 9e7471dd4ce8fad320cb14b095049694 https://www.encodeproject.org/files/ENCFF840NOO/@@download/ENCFF840NOO.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF536WLP fastq reads ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2569661832 Richard Myers, HAIB 6e5d7653f05a53ee9a64d1f6ef690b63 SRA:SRR5338973 https://www.encodeproject.org/files/ENCFF536WLP/@@download/ENCFF536WLP.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF117DNV fastq reads ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2912864344 Richard Myers, HAIB f74bfe3428cc1f6e56d13db9525b7bd8 SRA:SRR5338972 https://www.encodeproject.org/files/ENCFF117DNV/@@download/ENCFF117DNV.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF226HDF bam unfiltered alignments ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF117DNV, ENCFF643CGH 2998997741 ENCODE Processing Pipeline c5381738ead41c93f1e43a72e31193c1 https://www.encodeproject.org/files/ENCFF226HDF/@@download/ENCFF226HDF.bam GRCh38 released antibody characterized with exemption ENCFF050LPC bam unfiltered alignments ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF536WLP, ENCFF643CGH 2688544447 ENCODE Processing Pipeline 6062ff3d08e3ecd6328025a54df8c52b https://www.encodeproject.org/files/ENCFF050LPC/@@download/ENCFF050LPC.bam GRCh38 released antibody characterized with exemption ENCFF590IDN bam unfiltered alignments ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF536WLP, ENCFF807MUK 2681897933 ENCODE Processing Pipeline d312758ff5c604fe313d13b1b561a603 https://www.encodeproject.org/files/ENCFF590IDN/@@download/ENCFF590IDN.bam hg19 released antibody characterized with exemption ENCFF494XMP bam unfiltered alignments ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF117DNV, ENCFF807MUK 2992425970 ENCODE Processing Pipeline eeef72eeb999f89e72829efe46b93f7d https://www.encodeproject.org/files/ENCFF494XMP/@@download/ENCFF494XMP.bam hg19 released antibody characterized with exemption ENCFF379WXQ bam alignments ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF536WLP, ENCFF643CGH 1964365443 ENCODE Processing Pipeline 897379ece4377cc5c7f5ad5e41cde6d9 https://www.encodeproject.org/files/ENCFF379WXQ/@@download/ENCFF379WXQ.bam GRCh38 released antibody characterized with exemption ENCFF961FJC bam alignments ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF536WLP, ENCFF807MUK 1962691199 ENCODE Processing Pipeline 0c73b8bf90361d4a8b5972afe5f138ab https://www.encodeproject.org/files/ENCFF961FJC/@@download/ENCFF961FJC.bam hg19 released antibody characterized with exemption ENCFF049VHY bam alignments ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF117DNV, ENCFF643CGH 2238105928 ENCODE Processing Pipeline f302e429e508eb8d4fc8570f1801555c https://www.encodeproject.org/files/ENCFF049VHY/@@download/ENCFF049VHY.bam GRCh38 released antibody characterized with exemption ENCFF681XFM bam alignments ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF117DNV, ENCFF807MUK 2236473683 ENCODE Processing Pipeline 338bd6ec80b5f6c661fffa9f01d1660b https://www.encodeproject.org/files/ENCFF681XFM/@@download/ENCFF681XFM.bam hg19 released antibody characterized with exemption ENCFF314MAP bigWig signal p-value ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF379WXQ 672853483 ENCODE Processing Pipeline 7899e333225026831008d07b46c73d67 https://www.encodeproject.org/files/ENCFF314MAP/@@download/ENCFF314MAP.bigWig GRCh38 released antibody characterized with exemption ENCFF497PSF bigWig signal p-value ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF049VHY 668365808 ENCODE Processing Pipeline a7cea387f4324aa505e375e6a45dad55 https://www.encodeproject.org/files/ENCFF497PSF/@@download/ENCFF497PSF.bigWig GRCh38 released antibody characterized with exemption ENCFF255SFE bigWig fold change over control ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF049VHY 755679139 ENCODE Processing Pipeline a9a42e8dd88a95d92768af64fe98104f https://www.encodeproject.org/files/ENCFF255SFE/@@download/ENCFF255SFE.bigWig GRCh38 released antibody characterized with exemption ENCFF716YUL bigWig signal p-value ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF049VHY, ENCFF379WXQ 661503061 ENCODE Processing Pipeline e3f90e827093baf447a0f962f45b50cd https://www.encodeproject.org/files/ENCFF716YUL/@@download/ENCFF716YUL.bigWig GRCh38 released antibody characterized with exemption ENCFF939AIY bigWig fold change over control ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF379WXQ 678995492 ENCODE Processing Pipeline c065a7eb62699c3c27048f883da41968 https://www.encodeproject.org/files/ENCFF939AIY/@@download/ENCFF939AIY.bigWig GRCh38 released antibody characterized with exemption ENCFF210DOS bigWig fold change over control ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF049VHY, ENCFF379WXQ 1178762587 ENCODE Processing Pipeline cdb6384a547652a2e025dec6b92e475c https://www.encodeproject.org/files/ENCFF210DOS/@@download/ENCFF210DOS.bigWig GRCh38 released antibody characterized with exemption ENCFF146NZZ bed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF379WXQ 5698706 ENCODE Processing Pipeline 7d991746c7a1c3263b741876a1bf8b23 https://www.encodeproject.org/files/ENCFF146NZZ/@@download/ENCFF146NZZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF345ECO bed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF049VHY 6340785 ENCODE Processing Pipeline 35b11ad160a117eca15ac3b6be9332e0 https://www.encodeproject.org/files/ENCFF345ECO/@@download/ENCFF345ECO.bed.gz GRCh38 released antibody characterized with exemption ENCFF663HMG bed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF049VHY, ENCFF379WXQ 6837926 ENCODE Processing Pipeline b44c7b9111e41e5a2b95844aefff75f9 https://www.encodeproject.org/files/ENCFF663HMG/@@download/ENCFF663HMG.bed.gz GRCh38 released antibody characterized with exemption ENCFF531GMT bigBed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF146NZZ 13369254 ENCODE Processing Pipeline 5060d3e40d6ad4ffa36fc9b12d36f582 https://www.encodeproject.org/files/ENCFF531GMT/@@download/ENCFF531GMT.bigBed GRCh38 released antibody characterized with exemption ENCFF993UJT bigBed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF345ECO 13283297 ENCODE Processing Pipeline 37b961bd1f6fa44f578f17d2ac60b71c https://www.encodeproject.org/files/ENCFF993UJT/@@download/ENCFF993UJT.bigBed GRCh38 released antibody characterized with exemption ENCFF129VMF bigBed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF663HMG 13275892 ENCODE Processing Pipeline 7fabbbf8824c8d637d7ab3ca76bc64f2 https://www.encodeproject.org/files/ENCFF129VMF/@@download/ENCFF129VMF.bigBed GRCh38 released antibody characterized with exemption ENCFF872LJE bed narrowPeak conservative idr thresholded peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF146NZZ, ENCFF345ECO, ENCFF419RSJ, ENCFF663HMG 257698 ENCODE Processing Pipeline 2a173d2f36ec09d76676c7623a165841 https://www.encodeproject.org/files/ENCFF872LJE/@@download/ENCFF872LJE.bed.gz GRCh38 released antibody characterized with exemption ENCFF124ITH bed narrowPeak optimal idr thresholded peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF146NZZ, ENCFF345ECO, ENCFF419RSJ, ENCFF663HMG 289049 ENCODE Processing Pipeline 0090e4ff24b7905586762c2cb8d38d73 https://www.encodeproject.org/files/ENCFF124ITH/@@download/ENCFF124ITH.bed.gz GRCh38 released antibody characterized with exemption ENCFF385KMZ bigBed narrowPeak conservative idr thresholded peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF872LJE 505328 ENCODE Processing Pipeline 405456e3d2feca1117ef0f92d6883d73 https://www.encodeproject.org/files/ENCFF385KMZ/@@download/ENCFF385KMZ.bigBed GRCh38 released antibody characterized with exemption ENCFF173CCH bigBed narrowPeak optimal idr thresholded peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF124ITH 548246 ENCODE Processing Pipeline 7cb418f56902d37a43439a67f30c6c50 https://www.encodeproject.org/files/ENCFF173CCH/@@download/ENCFF173CCH.bigBed GRCh38 released antibody characterized with exemption ENCFF632UOK bigWig signal p-value ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF961FJC 1323840286 ENCODE Processing Pipeline 8886ac959fe316a69b5fa44862553f28 https://www.encodeproject.org/files/ENCFF632UOK/@@download/ENCFF632UOK.bigWig hg19 released antibody characterized with exemption ENCFF301THV bigWig signal p-value ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF681XFM 1363684685 ENCODE Processing Pipeline b85f71394684bc9cce32de369cbac1b0 https://www.encodeproject.org/files/ENCFF301THV/@@download/ENCFF301THV.bigWig hg19 released antibody characterized with exemption ENCFF917QLX bigWig signal p-value ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF681XFM, ENCFF961FJC 1645229188 ENCODE Processing Pipeline b5d9e6a7e7132706735655609f824770 https://www.encodeproject.org/files/ENCFF917QLX/@@download/ENCFF917QLX.bigWig hg19 released antibody characterized with exemption ENCFF540DSZ bigWig fold change over control ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF961FJC 1242462415 ENCODE Processing Pipeline 0c15400b64a2b560016a450cfc1d98ab https://www.encodeproject.org/files/ENCFF540DSZ/@@download/ENCFF540DSZ.bigWig hg19 released antibody characterized with exemption ENCFF906MHE bigWig fold change over control ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF681XFM 1316643599 ENCODE Processing Pipeline 5ab450ba7105791f0b7d8d5008c8bb3d https://www.encodeproject.org/files/ENCFF906MHE/@@download/ENCFF906MHE.bigWig hg19 released antibody characterized with exemption ENCFF471DGZ bigWig fold change over control ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF681XFM, ENCFF961FJC 1798973170 ENCODE Processing Pipeline c6087069a82f5eb8e065707065c9f4d5 https://www.encodeproject.org/files/ENCFF471DGZ/@@download/ENCFF471DGZ.bigWig hg19 released antibody characterized with exemption ENCFF733RUB bed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF681XFM 6837084 ENCODE Processing Pipeline 51693c057eaba4cd5fb3ec36ce764c31 https://www.encodeproject.org/files/ENCFF733RUB/@@download/ENCFF733RUB.bed.gz hg19 released antibody characterized with exemption ENCFF105ZTR bed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF961FJC 6567691 ENCODE Processing Pipeline b3fb12b853cd7aa8bad6d9792f31818a https://www.encodeproject.org/files/ENCFF105ZTR/@@download/ENCFF105ZTR.bed.gz hg19 released antibody characterized with exemption ENCFF702ZNH bed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF681XFM, ENCFF961FJC 7131497 ENCODE Processing Pipeline 13d4adfbcb58c92572f6953b86a4aef2 https://www.encodeproject.org/files/ENCFF702ZNH/@@download/ENCFF702ZNH.bed.gz hg19 released antibody characterized with exemption ENCFF190NHM bigBed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF733RUB 13303797 ENCODE Processing Pipeline e23747c5ee280cf1308b861485009689 https://www.encodeproject.org/files/ENCFF190NHM/@@download/ENCFF190NHM.bigBed hg19 released antibody characterized with exemption ENCFF751BPR bigBed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF105ZTR 13508102 ENCODE Processing Pipeline ca261280107b20f89d2e71267d5c1580 https://www.encodeproject.org/files/ENCFF751BPR/@@download/ENCFF751BPR.bigBed hg19 released antibody characterized with exemption ENCFF469XFP bigBed narrowPeak peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF702ZNH 13307012 ENCODE Processing Pipeline d717a8cd87bb845ad0a8fc9330815498 https://www.encodeproject.org/files/ENCFF469XFP/@@download/ENCFF469XFP.bigBed hg19 released antibody characterized with exemption ENCFF599DLQ bed narrowPeak conservative idr thresholded peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF105ZTR, ENCFF702ZNH, ENCFF733RUB 246730 ENCODE Processing Pipeline 472c316de789c15970f2f9bf703eb20d https://www.encodeproject.org/files/ENCFF599DLQ/@@download/ENCFF599DLQ.bed.gz hg19 released antibody characterized with exemption ENCFF229NZL bigBed narrowPeak conservative idr thresholded peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF599DLQ 492392 ENCODE Processing Pipeline 2203c568192e64aeb035a5ed67b2d61e https://www.encodeproject.org/files/ENCFF229NZL/@@download/ENCFF229NZL.bigBed hg19 released antibody characterized with exemption ENCFF030VPE bed narrowPeak optimal idr thresholded peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF105ZTR, ENCFF702ZNH, ENCFF733RUB 272057 ENCODE Processing Pipeline 0227a611f6b295a0e5b16e7fc03ad8ac https://www.encodeproject.org/files/ENCFF030VPE/@@download/ENCFF030VPE.bed.gz hg19 released antibody characterized with exemption ENCFF444MNK bigBed narrowPeak optimal idr thresholded peaks ENCSR569ARC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFYC-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF030VPE 526909 ENCODE Processing Pipeline cbd059bd25114c4f464f10416b50e917 https://www.encodeproject.org/files/ENCFF444MNK/@@download/ENCFF444MNK.bigBed hg19 released antibody characterized with exemption ENCFF294AGC fastq reads ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1919163960 Richard Myers, HAIB 240ec4967579220172a137482fc2a5b1 SRA:SRR5338547 https://www.encodeproject.org/files/ENCFF294AGC/@@download/ENCFF294AGC.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF896YTL fastq reads ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1959615336 Richard Myers, HAIB c6150bee437f46f520576db448ac4a78 SRA:SRR5338548 https://www.encodeproject.org/files/ENCFF896YTL/@@download/ENCFF896YTL.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF954XYL bam unfiltered alignments ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF896YTL 2304807723 ENCODE Processing Pipeline af36cac9ad532306285c9efd00624c2c https://www.encodeproject.org/files/ENCFF954XYL/@@download/ENCFF954XYL.bam GRCh38 released antibody characterized with exemption ENCFF616OOK bam unfiltered alignments ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF294AGC, ENCFF643CGH 2265836297 ENCODE Processing Pipeline 665e56721509bac7fa40d1c3e3bffe17 https://www.encodeproject.org/files/ENCFF616OOK/@@download/ENCFF616OOK.bam GRCh38 released antibody characterized with exemption ENCFF087GAF bam unfiltered alignments ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF294AGC, ENCFF807MUK 2259633941 ENCODE Processing Pipeline 066879dab304b3282a3b5ab96fa1c2c6 https://www.encodeproject.org/files/ENCFF087GAF/@@download/ENCFF087GAF.bam hg19 released antibody characterized with exemption ENCFF345CPI bam unfiltered alignments ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF896YTL 2298560478 ENCODE Processing Pipeline 210d6c0be36c2a67e123ed69e0850264 https://www.encodeproject.org/files/ENCFF345CPI/@@download/ENCFF345CPI.bam hg19 released antibody characterized with exemption ENCFF456NWN bam alignments ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF896YTL 1783881200 ENCODE Processing Pipeline d84524bf97bfd9fc6f3cd860e7c4880a https://www.encodeproject.org/files/ENCFF456NWN/@@download/ENCFF456NWN.bam GRCh38 released antibody characterized with exemption ENCFF738KYR bam alignments ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF294AGC, ENCFF807MUK 1757463790 ENCODE Processing Pipeline 2ad43eb6614180d82d64659a3696fe97 https://www.encodeproject.org/files/ENCFF738KYR/@@download/ENCFF738KYR.bam hg19 released antibody characterized with exemption ENCFF331YOR bam alignments ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF294AGC, ENCFF643CGH 1758746482 ENCODE Processing Pipeline 90cc60b7e789ab9ac1378be6929e4f8d https://www.encodeproject.org/files/ENCFF331YOR/@@download/ENCFF331YOR.bam GRCh38 released antibody characterized with exemption ENCFF763FHB bam alignments ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF896YTL 1782413450 ENCODE Processing Pipeline a7d2aca902d95441bacc41cfee800d9d https://www.encodeproject.org/files/ENCFF763FHB/@@download/ENCFF763FHB.bam hg19 released antibody characterized with exemption ENCFF887BNZ bigWig signal p-value ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF331YOR 665750768 ENCODE Processing Pipeline 627d358a9c5f46d0af55d5a949443482 https://www.encodeproject.org/files/ENCFF887BNZ/@@download/ENCFF887BNZ.bigWig GRCh38 released antibody characterized with exemption ENCFF739NCJ bigWig signal p-value ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF456NWN 702908273 ENCODE Processing Pipeline bba6e05b6a07ec09cc0031e6b0bc4e33 https://www.encodeproject.org/files/ENCFF739NCJ/@@download/ENCFF739NCJ.bigWig GRCh38 released antibody characterized with exemption ENCFF463TTG bigWig fold change over control ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF456NWN 689133861 ENCODE Processing Pipeline 7a8381133b6f8bbd7f35a216ba7a00e9 https://www.encodeproject.org/files/ENCFF463TTG/@@download/ENCFF463TTG.bigWig GRCh38 released antibody characterized with exemption ENCFF828SRG bigWig signal p-value ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF331YOR, ENCFF456NWN 630478939 ENCODE Processing Pipeline cf5d61a77c9f77817c7c8b92833ff298 https://www.encodeproject.org/files/ENCFF828SRG/@@download/ENCFF828SRG.bigWig GRCh38 released antibody characterized with exemption ENCFF565UDM bigWig fold change over control ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF331YOR 663198048 ENCODE Processing Pipeline 1deaeb9d8286515b44705e609846589a https://www.encodeproject.org/files/ENCFF565UDM/@@download/ENCFF565UDM.bigWig GRCh38 released antibody characterized with exemption ENCFF880MUQ bigWig fold change over control ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF331YOR, ENCFF456NWN 1000878681 ENCODE Processing Pipeline 902a054d66b84cda7c4d91af5040f4b3 https://www.encodeproject.org/files/ENCFF880MUQ/@@download/ENCFF880MUQ.bigWig GRCh38 released antibody characterized with exemption ENCFF566RVI bed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF456NWN 6630954 ENCODE Processing Pipeline be29cf8b851f161e3cc9d14e1252a15a https://www.encodeproject.org/files/ENCFF566RVI/@@download/ENCFF566RVI.bed.gz GRCh38 released antibody characterized with exemption ENCFF172XQM bed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF331YOR 7080679 ENCODE Processing Pipeline 8ab4f040cebf271b72df4aeb6235dc19 https://www.encodeproject.org/files/ENCFF172XQM/@@download/ENCFF172XQM.bed.gz GRCh38 released antibody characterized with exemption ENCFF780ORR bigBed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF566RVI 12618025 ENCODE Processing Pipeline f0d1e8f577f185b5ab51844fbec625ce https://www.encodeproject.org/files/ENCFF780ORR/@@download/ENCFF780ORR.bigBed GRCh38 released antibody characterized with exemption ENCFF203OQD bed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF331YOR, ENCFF456NWN 6940648 ENCODE Processing Pipeline 8c4acf8ef89e062069d13fde78595654 https://www.encodeproject.org/files/ENCFF203OQD/@@download/ENCFF203OQD.bed.gz GRCh38 released antibody characterized with exemption ENCFF722QEV bigBed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203OQD 12724816 ENCODE Processing Pipeline 048ad86b68a7170f5ebb9bbffb0a3781 https://www.encodeproject.org/files/ENCFF722QEV/@@download/ENCFF722QEV.bigBed GRCh38 released antibody characterized with exemption ENCFF144QPP bigBed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF172XQM 12237547 ENCODE Processing Pipeline d32725d95aa08a17eaadfe7b4cd3aaab https://www.encodeproject.org/files/ENCFF144QPP/@@download/ENCFF144QPP.bigBed GRCh38 released antibody characterized with exemption ENCFF443INC bigBed narrowPeak conservative idr thresholded peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF429HYI 221153 ENCODE Processing Pipeline 739bffe1d774c5ba7674d76d20e8c66e https://www.encodeproject.org/files/ENCFF443INC/@@download/ENCFF443INC.bigBed GRCh38 released antibody characterized with exemption ENCFF429HYI bed narrowPeak conservative idr thresholded peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF172XQM, ENCFF203OQD, ENCFF419RSJ, ENCFF566RVI 70310 ENCODE Processing Pipeline e4592f16afb18d6d5b9048e13f183a15 https://www.encodeproject.org/files/ENCFF429HYI/@@download/ENCFF429HYI.bed.gz GRCh38 released antibody characterized with exemption ENCFF252CVY bed narrowPeak optimal idr thresholded peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF172XQM, ENCFF203OQD, ENCFF419RSJ, ENCFF566RVI 132617 ENCODE Processing Pipeline 8aab2b28d5a238291403f989eadd3cca https://www.encodeproject.org/files/ENCFF252CVY/@@download/ENCFF252CVY.bed.gz GRCh38 released antibody characterized with exemption ENCFF178NVK bigBed narrowPeak optimal idr thresholded peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF252CVY 335091 ENCODE Processing Pipeline 38e33b13b707deb957d5040eb4c8f733 https://www.encodeproject.org/files/ENCFF178NVK/@@download/ENCFF178NVK.bigBed GRCh38 released antibody characterized with exemption ENCFF528HXU bigWig signal p-value ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF738KYR 1446842233 ENCODE Processing Pipeline 74f394961b6648e72d201bf65c88c0ee https://www.encodeproject.org/files/ENCFF528HXU/@@download/ENCFF528HXU.bigWig hg19 released antibody characterized with exemption ENCFF752MLU bigWig fold change over control ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF738KYR 1218499434 ENCODE Processing Pipeline 07d69d94c9e21a86bd1595b0b37379a5 https://www.encodeproject.org/files/ENCFF752MLU/@@download/ENCFF752MLU.bigWig hg19 released antibody characterized with exemption ENCFF793TAZ bed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF738KYR 7141361 ENCODE Processing Pipeline b58ab98a60822b8bb31fed0c10388cb7 https://www.encodeproject.org/files/ENCFF793TAZ/@@download/ENCFF793TAZ.bed.gz hg19 released antibody characterized with exemption ENCFF208ZYM bigBed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF364IZN 12798785 ENCODE Processing Pipeline fef90492a38941aaa6b518787346d58b https://www.encodeproject.org/files/ENCFF208ZYM/@@download/ENCFF208ZYM.bigBed hg19 released antibody characterized with exemption ENCFF285EPH bed narrowPeak conservative idr thresholded peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF364IZN, ENCFF465YUV, ENCFF793TAZ 83552 ENCODE Processing Pipeline fc6c27281f8a97222178753ac90cc495 https://www.encodeproject.org/files/ENCFF285EPH/@@download/ENCFF285EPH.bed.gz hg19 released antibody characterized with exemption ENCFF231NMD bigBed narrowPeak conservative idr thresholded peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF285EPH 249037 ENCODE Processing Pipeline b17d39f6f09766a931a58efe5a432165 https://www.encodeproject.org/files/ENCFF231NMD/@@download/ENCFF231NMD.bigBed hg19 released antibody characterized with exemption ENCFF446XJC bigWig signal p-value ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF763FHB 1257395565 ENCODE Processing Pipeline 67f1ab875c9d8d415eee41be50de37ec https://www.encodeproject.org/files/ENCFF446XJC/@@download/ENCFF446XJC.bigWig hg19 released antibody characterized with exemption ENCFF412QJJ bigBed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF465YUV 12546047 ENCODE Processing Pipeline 68ba5dcea234a49874504511382482bf https://www.encodeproject.org/files/ENCFF412QJJ/@@download/ENCFF412QJJ.bigBed hg19 released antibody characterized with exemption ENCFF684UBK bigWig signal p-value ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF738KYR, ENCFF763FHB 1584565834 ENCODE Processing Pipeline 6327d22ae2315a7e7aecf7853eeefcb4 https://www.encodeproject.org/files/ENCFF684UBK/@@download/ENCFF684UBK.bigWig hg19 released antibody characterized with exemption ENCFF875BML bigWig fold change over control ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF763FHB 1057723831 ENCODE Processing Pipeline 784eae69488afd748ba2e688640042f3 https://www.encodeproject.org/files/ENCFF875BML/@@download/ENCFF875BML.bigWig hg19 released antibody characterized with exemption ENCFF830ZNT bigWig fold change over control ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF738KYR, ENCFF763FHB 1601623621 ENCODE Processing Pipeline 97e40bd52a9b46c99dbc1b717a7c1003 https://www.encodeproject.org/files/ENCFF830ZNT/@@download/ENCFF830ZNT.bigWig hg19 released antibody characterized with exemption ENCFF364IZN bed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF763FHB 6724470 ENCODE Processing Pipeline 14375e83a7360094fbedf46297c45188 https://www.encodeproject.org/files/ENCFF364IZN/@@download/ENCFF364IZN.bed.gz hg19 released antibody characterized with exemption ENCFF465YUV bed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF738KYR, ENCFF763FHB 7145084 ENCODE Processing Pipeline 8ce1446665a443b5af8830c7f1676a8b https://www.encodeproject.org/files/ENCFF465YUV/@@download/ENCFF465YUV.bed.gz hg19 released antibody characterized with exemption ENCFF089DBA bigBed narrowPeak peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF793TAZ 12526867 ENCODE Processing Pipeline ee8239f1c770959fc6590883175ea47b https://www.encodeproject.org/files/ENCFF089DBA/@@download/ENCFF089DBA.bigBed hg19 released antibody characterized with exemption ENCFF662RMK bed narrowPeak optimal idr thresholded peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF364IZN, ENCFF465YUV, ENCFF793TAZ 97371 ENCODE Processing Pipeline 3322334db4a5e6f39c1944567c16b080 https://www.encodeproject.org/files/ENCFF662RMK/@@download/ENCFF662RMK.bed.gz hg19 released antibody characterized with exemption ENCFF425VDA bigBed narrowPeak optimal idr thresholded peaks ENCSR327RFM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PAF1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF662RMK 274532 ENCODE Processing Pipeline 7031f1bfb7ff6a5b872a7b178a578afe https://www.encodeproject.org/files/ENCFF425VDA/@@download/ENCFF425VDA.bigBed hg19 released antibody characterized with exemption ENCFF937ICR fastq reads ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2054897149 Richard Myers, HAIB b7a28ad1f869c9273a026c9aa48cc4cf SRA:SRR5339014 https://www.encodeproject.org/files/ENCFF937ICR/@@download/ENCFF937ICR.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF425ZYO fastq reads ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2074846644 Richard Myers, HAIB 8821c7b50d75f694ce22cc288fa0d87f SRA:SRR5339015 https://www.encodeproject.org/files/ENCFF425ZYO/@@download/ENCFF425ZYO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF428GPR bam unfiltered alignments ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF937ICR 2279923069 ENCODE Processing Pipeline 5664f348d6b8f0f69182f5b15dcfaa98 https://www.encodeproject.org/files/ENCFF428GPR/@@download/ENCFF428GPR.bam GRCh38 released antibody characterized with exemption ENCFF942RRM bam unfiltered alignments ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF425ZYO, ENCFF807MUK 2290347522 ENCODE Processing Pipeline 13a4be62c9cc3d88af2ecc0ac3c6ccfd https://www.encodeproject.org/files/ENCFF942RRM/@@download/ENCFF942RRM.bam hg19 released antibody characterized with exemption ENCFF851EKN bam unfiltered alignments ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF425ZYO, ENCFF643CGH 2294893796 ENCODE Processing Pipeline b53b6ae6b18cad46209128d8f6f8b9d3 https://www.encodeproject.org/files/ENCFF851EKN/@@download/ENCFF851EKN.bam GRCh38 released antibody characterized with exemption ENCFF322QSG bam unfiltered alignments ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF937ICR 2274836118 ENCODE Processing Pipeline f47ba039e176527f7f4b0af169cf8ed6 https://www.encodeproject.org/files/ENCFF322QSG/@@download/ENCFF322QSG.bam hg19 released antibody characterized with exemption ENCFF450IPE bam alignments ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF937ICR 1746260993 ENCODE Processing Pipeline 6603a67b4b47e728e70f639daf165f53 https://www.encodeproject.org/files/ENCFF450IPE/@@download/ENCFF450IPE.bam GRCh38 released antibody characterized with exemption ENCFF322PIR bam alignments ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF425ZYO, ENCFF807MUK 1690147510 ENCODE Processing Pipeline c19842c9124092d78e2669d8de2fbdc1 https://www.encodeproject.org/files/ENCFF322PIR/@@download/ENCFF322PIR.bam hg19 released antibody characterized with exemption ENCFF155WNX bam alignments ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF937ICR 1745311423 ENCODE Processing Pipeline be861267a253dea4b2e3fe8f43451e5e https://www.encodeproject.org/files/ENCFF155WNX/@@download/ENCFF155WNX.bam hg19 released antibody characterized with exemption ENCFF515VII bam alignments ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF425ZYO, ENCFF643CGH 1690927208 ENCODE Processing Pipeline c086ca727921e6a702f73f05595d8f8a https://www.encodeproject.org/files/ENCFF515VII/@@download/ENCFF515VII.bam GRCh38 released antibody characterized with exemption ENCFF177FUZ bigWig signal p-value ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF515VII 627985723 ENCODE Processing Pipeline e9d9ddac6e6cf743b128a2f3e97406f2 https://www.encodeproject.org/files/ENCFF177FUZ/@@download/ENCFF177FUZ.bigWig GRCh38 released antibody characterized with exemption ENCFF684NGK bigWig signal p-value ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF450IPE 616808126 ENCODE Processing Pipeline 7fb8086d2a6c9be937f9d9ce46ea284f https://www.encodeproject.org/files/ENCFF684NGK/@@download/ENCFF684NGK.bigWig GRCh38 released antibody characterized with exemption ENCFF399ZCX bigWig signal p-value ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF450IPE, ENCFF515VII 671539813 ENCODE Processing Pipeline 4d656ccf1565b035f8728c2b78c55c22 https://www.encodeproject.org/files/ENCFF399ZCX/@@download/ENCFF399ZCX.bigWig GRCh38 released antibody characterized with exemption ENCFF528MVJ bigWig fold change over control ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF450IPE 612414568 ENCODE Processing Pipeline a88bd740af75a8966f7ea4faeba8ee70 https://www.encodeproject.org/files/ENCFF528MVJ/@@download/ENCFF528MVJ.bigWig GRCh38 released antibody characterized with exemption ENCFF781GNL bigWig fold change over control ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF515VII 618829260 ENCODE Processing Pipeline f6ddfe7430ad891f67fc0f2aa38a8cc1 https://www.encodeproject.org/files/ENCFF781GNL/@@download/ENCFF781GNL.bigWig GRCh38 released antibody characterized with exemption ENCFF508TIU bigWig fold change over control ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF450IPE, ENCFF515VII 1062531230 ENCODE Processing Pipeline 7918d7dd61c5164ae90d5a6cfd012677 https://www.encodeproject.org/files/ENCFF508TIU/@@download/ENCFF508TIU.bigWig GRCh38 released antibody characterized with exemption ENCFF895ZDC bed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF515VII 6143504 ENCODE Processing Pipeline 73e68e2f4d168ba1ecaf681f8660c421 https://www.encodeproject.org/files/ENCFF895ZDC/@@download/ENCFF895ZDC.bed.gz GRCh38 released antibody characterized with exemption ENCFF539NYK bed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF450IPE 6280636 ENCODE Processing Pipeline 57eab34951476de3aa6e1397da17a110 https://www.encodeproject.org/files/ENCFF539NYK/@@download/ENCFF539NYK.bed.gz GRCh38 released antibody characterized with exemption ENCFF184JMI bed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF450IPE, ENCFF515VII 7141730 ENCODE Processing Pipeline 26f10cccf4825b2aac35dbf9737b1685 https://www.encodeproject.org/files/ENCFF184JMI/@@download/ENCFF184JMI.bed.gz GRCh38 released antibody characterized with exemption ENCFF294FYH bigBed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF539NYK 13102856 ENCODE Processing Pipeline a2f1952abf2bdf3195cea300275bfb85 https://www.encodeproject.org/files/ENCFF294FYH/@@download/ENCFF294FYH.bigBed GRCh38 released antibody characterized with exemption ENCFF791BEH bigBed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF895ZDC 13019690 ENCODE Processing Pipeline cf0ce176b61837873a91ff054d80527e https://www.encodeproject.org/files/ENCFF791BEH/@@download/ENCFF791BEH.bigBed GRCh38 released antibody characterized with exemption ENCFF476WVI bigBed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF184JMI 12776884 ENCODE Processing Pipeline 57aaee802ca8f592af19c8e7f1afd1f5 https://www.encodeproject.org/files/ENCFF476WVI/@@download/ENCFF476WVI.bigBed GRCh38 released antibody characterized with exemption ENCFF236SLK bed narrowPeak conservative idr thresholded peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF184JMI, ENCFF419RSJ, ENCFF539NYK, ENCFF895ZDC 220501 ENCODE Processing Pipeline e51075c0f00c13fbcac1f330329d44ab https://www.encodeproject.org/files/ENCFF236SLK/@@download/ENCFF236SLK.bed.gz GRCh38 released antibody characterized with exemption ENCFF596GUJ bigBed narrowPeak conservative idr thresholded peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF236SLK 466451 ENCODE Processing Pipeline 3f613c6271e54c980e1ed43e1c4540fb https://www.encodeproject.org/files/ENCFF596GUJ/@@download/ENCFF596GUJ.bigBed GRCh38 released antibody characterized with exemption ENCFF443QKY bed narrowPeak optimal idr thresholded peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF184JMI, ENCFF419RSJ, ENCFF539NYK, ENCFF895ZDC 227508 ENCODE Processing Pipeline fa651ea6529181cd5b0bb48d8f7292bc https://www.encodeproject.org/files/ENCFF443QKY/@@download/ENCFF443QKY.bed.gz GRCh38 released antibody characterized with exemption ENCFF656RLK bigBed narrowPeak optimal idr thresholded peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF443QKY 479509 ENCODE Processing Pipeline d0f39fe1ee0e390ef3d0226fa37376c0 https://www.encodeproject.org/files/ENCFF656RLK/@@download/ENCFF656RLK.bigBed GRCh38 released antibody characterized with exemption ENCFF371BVQ bigWig signal p-value ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF322PIR 1307945123 ENCODE Processing Pipeline 0b40a1ad74f33573926f43e03dd80c5d https://www.encodeproject.org/files/ENCFF371BVQ/@@download/ENCFF371BVQ.bigWig hg19 released antibody characterized with exemption ENCFF534UBO bigWig signal p-value ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF155WNX, ENCFF203ABR 1311845782 ENCODE Processing Pipeline edfe06e46812085d2742a6495748b45c https://www.encodeproject.org/files/ENCFF534UBO/@@download/ENCFF534UBO.bigWig hg19 released antibody characterized with exemption ENCFF785WAI bigWig signal p-value ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF155WNX, ENCFF203ABR, ENCFF322PIR 1706707490 ENCODE Processing Pipeline ecf13be7a404ced14dd8c41c1fd65fe4 https://www.encodeproject.org/files/ENCFF785WAI/@@download/ENCFF785WAI.bigWig hg19 released antibody characterized with exemption ENCFF620VVL bigWig fold change over control ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF322PIR 1256794445 ENCODE Processing Pipeline a9cd07c8759f72606232526b3725c577 https://www.encodeproject.org/files/ENCFF620VVL/@@download/ENCFF620VVL.bigWig hg19 released antibody characterized with exemption ENCFF634GOR bigWig fold change over control ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF155WNX, ENCFF203ABR 1126392142 ENCODE Processing Pipeline a3de5d984714e00ff0321ef44cca34de https://www.encodeproject.org/files/ENCFF634GOR/@@download/ENCFF634GOR.bigWig hg19 released antibody characterized with exemption ENCFF607AJC bigWig fold change over control ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF155WNX, ENCFF203ABR, ENCFF322PIR 1711426658 ENCODE Processing Pipeline 0a702efd10fe785300eb11b21ca9e37d https://www.encodeproject.org/files/ENCFF607AJC/@@download/ENCFF607AJC.bigWig hg19 released antibody characterized with exemption ENCFF770ZZB bed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF322PIR 7088347 ENCODE Processing Pipeline 410811b01a5019cba7effd86538b328d https://www.encodeproject.org/files/ENCFF770ZZB/@@download/ENCFF770ZZB.bed.gz hg19 released antibody characterized with exemption ENCFF671LXX bed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF155WNX, ENCFF203ABR 6961663 ENCODE Processing Pipeline 82ac8059f249cf7aa63a380c293bb1d3 https://www.encodeproject.org/files/ENCFF671LXX/@@download/ENCFF671LXX.bed.gz hg19 released antibody characterized with exemption ENCFF589JFZ bed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF155WNX, ENCFF203ABR, ENCFF322PIR 7185541 ENCODE Processing Pipeline 924b8f006ddd79c4eafaeb76ac32847b https://www.encodeproject.org/files/ENCFF589JFZ/@@download/ENCFF589JFZ.bed.gz hg19 released antibody characterized with exemption ENCFF167LYS bigBed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF589JFZ 12874080 ENCODE Processing Pipeline 7e99084d78bad9b2191ab8544824ee30 https://www.encodeproject.org/files/ENCFF167LYS/@@download/ENCFF167LYS.bigBed hg19 released antibody characterized with exemption ENCFF379XBT bigBed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF770ZZB 12807558 ENCODE Processing Pipeline e36a42356b24ec7e97192028a083134d https://www.encodeproject.org/files/ENCFF379XBT/@@download/ENCFF379XBT.bigBed hg19 released antibody characterized with exemption ENCFF888KWN bigBed narrowPeak peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF671LXX 13098746 ENCODE Processing Pipeline 3ca0317c04fe86a57249c0887eebb731 https://www.encodeproject.org/files/ENCFF888KWN/@@download/ENCFF888KWN.bigBed hg19 released antibody characterized with exemption ENCFF543ZEV bigBed narrowPeak conservative idr thresholded peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF849QJW 342162 ENCODE Processing Pipeline db3409c90963888aa19db87aa718ffb7 https://www.encodeproject.org/files/ENCFF543ZEV/@@download/ENCFF543ZEV.bigBed hg19 released antibody characterized with exemption ENCFF849QJW bed narrowPeak conservative idr thresholded peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF589JFZ, ENCFF671LXX, ENCFF770ZZB 174315 ENCODE Processing Pipeline 8027bb74ebdf744068850f88a33b3915 https://www.encodeproject.org/files/ENCFF849QJW/@@download/ENCFF849QJW.bed.gz hg19 released antibody characterized with exemption ENCFF338ZJP bed narrowPeak optimal idr thresholded peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF589JFZ, ENCFF671LXX, ENCFF770ZZB 193379 ENCODE Processing Pipeline ea0a8c0256e7684e4d6fa2c393c3410f https://www.encodeproject.org/files/ENCFF338ZJP/@@download/ENCFF338ZJP.bed.gz hg19 released antibody characterized with exemption ENCFF294UHO bigBed narrowPeak optimal idr thresholded peaks ENCSR616OSG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF338ZJP 368952 ENCODE Processing Pipeline 15c8d0bcd10419bc572abf906cb9fca1 https://www.encodeproject.org/files/ENCFF294UHO/@@download/ENCFF294UHO.bigBed hg19 released antibody characterized with exemption ENCFF261LRY fastq reads ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1382664635 Richard Myers, HAIB 7d133b1f256ebfb6363851c65e82c2d6 SRA:SRR5331203 https://www.encodeproject.org/files/ENCFF261LRY/@@download/ENCFF261LRY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF402KIC fastq reads ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2038930919 Richard Myers, HAIB ce0d37dd23ef137ee691026d72a39254 SRA:SRR5331202 https://www.encodeproject.org/files/ENCFF402KIC/@@download/ENCFF402KIC.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF637CQD bam unfiltered alignments ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF261LRY, ENCFF643CGH 1614820357 ENCODE Processing Pipeline 1e0759847dbb66bbac6feda39fdfa511 https://www.encodeproject.org/files/ENCFF637CQD/@@download/ENCFF637CQD.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF259HFL bam unfiltered alignments ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF261LRY, ENCFF807MUK 1612185014 ENCODE Processing Pipeline b64b47231e9a8ccc1bac13a5759252b1 https://www.encodeproject.org/files/ENCFF259HFL/@@download/ENCFF259HFL.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF954QTJ bam unfiltered alignments ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF402KIC, ENCFF643CGH 2397469385 ENCODE Processing Pipeline ded1092d7b6aaa761f3de033cc101d18 https://www.encodeproject.org/files/ENCFF954QTJ/@@download/ENCFF954QTJ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF297MHQ bam unfiltered alignments ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF402KIC, ENCFF807MUK 2390548712 ENCODE Processing Pipeline 124bf267d4762608dd1f1f32029675cc https://www.encodeproject.org/files/ENCFF297MHQ/@@download/ENCFF297MHQ.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF045LKN bam alignments ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF261LRY, ENCFF643CGH 1310174525 ENCODE Processing Pipeline c77f74dda12b009afa916078159342aa https://www.encodeproject.org/files/ENCFF045LKN/@@download/ENCFF045LKN.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF206GMY bam alignments ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF261LRY, ENCFF807MUK 1309809224 ENCODE Processing Pipeline e37c5868cf2ba27dbb6a8043086b63b2 https://www.encodeproject.org/files/ENCFF206GMY/@@download/ENCFF206GMY.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF742QEL bam alignments ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF402KIC, ENCFF643CGH 1744150805 ENCODE Processing Pipeline e43ce9b6791795a1b1ecde755295406d https://www.encodeproject.org/files/ENCFF742QEL/@@download/ENCFF742QEL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF961GTC bam alignments ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF402KIC, ENCFF807MUK 1742772147 ENCODE Processing Pipeline fce6fe3b178438b0d06b1881412a1b13 https://www.encodeproject.org/files/ENCFF961GTC/@@download/ENCFF961GTC.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF487WHH bigWig signal p-value ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF045LKN 553552240 ENCODE Processing Pipeline 03da7e91d6ec710ec1a312f8d1199967 https://www.encodeproject.org/files/ENCFF487WHH/@@download/ENCFF487WHH.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF384UUX bigWig signal p-value ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF742QEL 612959088 ENCODE Processing Pipeline 64c33d6522e944199fbd477ae7ba4e55 https://www.encodeproject.org/files/ENCFF384UUX/@@download/ENCFF384UUX.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF792FNY bigWig signal p-value ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF045LKN, ENCFF742QEL 677803834 ENCODE Processing Pipeline 24c110523aee853720bb812867c994ee https://www.encodeproject.org/files/ENCFF792FNY/@@download/ENCFF792FNY.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF500YGL bigWig fold change over control ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF742QEL 600257730 ENCODE Processing Pipeline 7f1ed687a0fd4943468f3ff6cef6d3bd https://www.encodeproject.org/files/ENCFF500YGL/@@download/ENCFF500YGL.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF692ATK bigWig fold change over control ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF045LKN 511539248 ENCODE Processing Pipeline e6a675fb249e203578ca19d91153909b https://www.encodeproject.org/files/ENCFF692ATK/@@download/ENCFF692ATK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF722YGP bigWig fold change over control ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF045LKN, ENCFF742QEL 946805315 ENCODE Processing Pipeline 7e799e46ff3d57ab3329d61898b73c79 https://www.encodeproject.org/files/ENCFF722YGP/@@download/ENCFF722YGP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF062NZW bed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF045LKN 6306076 ENCODE Processing Pipeline 6e0d2c3a9d6beaec4de319844d2f0732 https://www.encodeproject.org/files/ENCFF062NZW/@@download/ENCFF062NZW.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF698AFP bed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF045LKN, ENCFF742QEL 6836560 ENCODE Processing Pipeline 8dc2d720dd01b58277eb42f5423e5db8 https://www.encodeproject.org/files/ENCFF698AFP/@@download/ENCFF698AFP.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF318KIV bed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF742QEL 6084016 ENCODE Processing Pipeline d36bd08930bf3f475fcc7defe5aa61f9 https://www.encodeproject.org/files/ENCFF318KIV/@@download/ENCFF318KIV.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF730VOM bigBed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF062NZW 12910673 ENCODE Processing Pipeline 6b9c2c42fed8abf83be012e1e7786e7e https://www.encodeproject.org/files/ENCFF730VOM/@@download/ENCFF730VOM.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF064YFD bigBed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF318KIV 13242305 ENCODE Processing Pipeline 5b8c52988b27ba37ccdf1dccb6c63ebf https://www.encodeproject.org/files/ENCFF064YFD/@@download/ENCFF064YFD.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF366QTN bigBed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF698AFP 12959004 ENCODE Processing Pipeline 6361f9b1260d7a9a310458d1cbd961b4 https://www.encodeproject.org/files/ENCFF366QTN/@@download/ENCFF366QTN.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF470INJ bed narrowPeak conservative idr thresholded peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF062NZW, ENCFF318KIV, ENCFF419RSJ, ENCFF698AFP 287658 ENCODE Processing Pipeline be99ac3fa0098a79f4f3001c71d52596 https://www.encodeproject.org/files/ENCFF470INJ/@@download/ENCFF470INJ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF028YAP bigBed narrowPeak conservative idr thresholded peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF470INJ 645454 ENCODE Processing Pipeline 42ac97a52022d804650ca03ccb26d4cc https://www.encodeproject.org/files/ENCFF028YAP/@@download/ENCFF028YAP.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF914TSO bed narrowPeak optimal idr thresholded peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF062NZW, ENCFF318KIV, ENCFF419RSJ, ENCFF698AFP 454003 ENCODE Processing Pipeline 2bafd1e4138874ef57ba0e233ee93691 https://www.encodeproject.org/files/ENCFF914TSO/@@download/ENCFF914TSO.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF881TFG bigBed narrowPeak optimal idr thresholded peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF914TSO 906891 ENCODE Processing Pipeline 5251403c2646cb16ae1c58380cf5a720 https://www.encodeproject.org/files/ENCFF881TFG/@@download/ENCFF881TFG.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF635WZG bigWig signal p-value ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF961GTC 1243045830 ENCODE Processing Pipeline 5dcf350c2c1cbe18f2eb09e4f31d10aa https://www.encodeproject.org/files/ENCFF635WZG/@@download/ENCFF635WZG.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF987TZC bigWig signal p-value ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF206GMY 1242360008 ENCODE Processing Pipeline 294c9e620be6b2ef2d364f7c17131a98 https://www.encodeproject.org/files/ENCFF987TZC/@@download/ENCFF987TZC.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF215VUM bigWig signal p-value ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF206GMY, ENCFF961GTC 1320394124 ENCODE Processing Pipeline e62c8a87f302c402d830dc9c86281c90 https://www.encodeproject.org/files/ENCFF215VUM/@@download/ENCFF215VUM.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF729XSK bigWig fold change over control ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF206GMY 968890161 ENCODE Processing Pipeline 5e8ee39e63df31cc422362c8960fcc42 https://www.encodeproject.org/files/ENCFF729XSK/@@download/ENCFF729XSK.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF377FJF bigWig fold change over control ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF961GTC 1061101790 ENCODE Processing Pipeline d438f5a1fd6b263738e28bd638634362 https://www.encodeproject.org/files/ENCFF377FJF/@@download/ENCFF377FJF.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF903JLK bigWig fold change over control ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF206GMY, ENCFF961GTC 1542977270 ENCODE Processing Pipeline d8d843872f8c6e4d1f7633b15634d7ca https://www.encodeproject.org/files/ENCFF903JLK/@@download/ENCFF903JLK.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF620TDM bed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF206GMY 6787270 ENCODE Processing Pipeline 79900484dce7fb22875f97caa569e21d https://www.encodeproject.org/files/ENCFF620TDM/@@download/ENCFF620TDM.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF381ZGO bed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF961GTC 6672164 ENCODE Processing Pipeline 4ebed3309cd75ab37a60b84b13491cbb https://www.encodeproject.org/files/ENCFF381ZGO/@@download/ENCFF381ZGO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF063ZLC bigBed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF620TDM 12916768 ENCODE Processing Pipeline e7d7e8fed144346b7485d53ee1c0a168 https://www.encodeproject.org/files/ENCFF063ZLC/@@download/ENCFF063ZLC.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF336VHS bed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF206GMY, ENCFF961GTC 7025566 ENCODE Processing Pipeline 8ced14c54f2cf142dec140cec828960f https://www.encodeproject.org/files/ENCFF336VHS/@@download/ENCFF336VHS.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF825HTR bigBed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF381ZGO 13284144 ENCODE Processing Pipeline 9bd92cc87b2fa6fc359213dbad83c6f3 https://www.encodeproject.org/files/ENCFF825HTR/@@download/ENCFF825HTR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF250DOK bigBed narrowPeak peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF336VHS 12914066 ENCODE Processing Pipeline 96d10f2e78996bef140c74f9debc782d https://www.encodeproject.org/files/ENCFF250DOK/@@download/ENCFF250DOK.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF750UVK bed narrowPeak conservative idr thresholded peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF336VHS, ENCFF381ZGO, ENCFF620TDM 290829 ENCODE Processing Pipeline 564876d427aa51f973aab85e6e66e09a https://www.encodeproject.org/files/ENCFF750UVK/@@download/ENCFF750UVK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF515VAF bed narrowPeak optimal idr thresholded peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF336VHS, ENCFF381ZGO, ENCFF620TDM 429154 ENCODE Processing Pipeline 4c0c30001d9d56ec1d5a6f6d247de5ee https://www.encodeproject.org/files/ENCFF515VAF/@@download/ENCFF515VAF.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF899EBQ bigBed narrowPeak conservative idr thresholded peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF750UVK 549755 ENCODE Processing Pipeline 46e92a6857abd4bacafeb16d3f375d5c https://www.encodeproject.org/files/ENCFF899EBQ/@@download/ENCFF899EBQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF290MUH bigBed narrowPeak optimal idr thresholded peaks ENCSR072GJV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF515VAF 909626 ENCODE Processing Pipeline 6caed930704f9ad7d2efadcf6dd96900 https://www.encodeproject.org/files/ENCFF290MUH/@@download/ENCFF290MUH.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF608JCC fastq reads ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2574439298 Richard Myers, HAIB c01ded7786fd8f58369541c0ddc5f64e SRA:SRR5339055 https://www.encodeproject.org/files/ENCFF608JCC/@@download/ENCFF608JCC.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF430LJV fastq reads ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1854107571 Richard Myers, HAIB 67423778c7decf0ff8147115e2739671 SRA:SRR5339054 https://www.encodeproject.org/files/ENCFF430LJV/@@download/ENCFF430LJV.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF795BPY bam unfiltered alignments ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF430LJV, ENCFF643CGH 1954836696 ENCODE Processing Pipeline 86ab4263b80c25fd5c7f5d99dd237ac2 https://www.encodeproject.org/files/ENCFF795BPY/@@download/ENCFF795BPY.bam GRCh38 released antibody characterized with exemption ENCFF295DRI bam unfiltered alignments ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF608JCC, ENCFF643CGH 2676202634 ENCODE Processing Pipeline 5c45000691002cb41993103a6300a850 https://www.encodeproject.org/files/ENCFF295DRI/@@download/ENCFF295DRI.bam GRCh38 released antibody characterized with exemption ENCFF313IDI bam unfiltered alignments ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF430LJV, ENCFF807MUK 1950958992 ENCODE Processing Pipeline eea621272a29285be6751948cc14bac5 https://www.encodeproject.org/files/ENCFF313IDI/@@download/ENCFF313IDI.bam hg19 released antibody characterized with exemption ENCFF491HVO bam unfiltered alignments ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF608JCC, ENCFF807MUK 2670376053 ENCODE Processing Pipeline 59fd727b391a728deb46d6d6d86a8997 https://www.encodeproject.org/files/ENCFF491HVO/@@download/ENCFF491HVO.bam hg19 released antibody characterized with exemption ENCFF751UYZ bam alignments ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF430LJV, ENCFF643CGH 1480260227 ENCODE Processing Pipeline 1e1fcce0146dd489e8356b39cd985750 https://www.encodeproject.org/files/ENCFF751UYZ/@@download/ENCFF751UYZ.bam GRCh38 released antibody characterized with exemption ENCFF176IME bam alignments ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF430LJV, ENCFF807MUK 1479485528 ENCODE Processing Pipeline 70a3e7f1beaf310e580ab1a81c20e9ab https://www.encodeproject.org/files/ENCFF176IME/@@download/ENCFF176IME.bam hg19 released antibody characterized with exemption ENCFF406OSZ bam alignments ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF608JCC, ENCFF643CGH 2026891576 ENCODE Processing Pipeline ce39f36ef1cb7a588d7440df9cd7557f https://www.encodeproject.org/files/ENCFF406OSZ/@@download/ENCFF406OSZ.bam GRCh38 released antibody characterized with exemption ENCFF944MOK bam alignments ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF608JCC, ENCFF807MUK 2025574410 ENCODE Processing Pipeline 1e2f3c882ced21b2ccb814454206da7c https://www.encodeproject.org/files/ENCFF944MOK/@@download/ENCFF944MOK.bam hg19 released antibody characterized with exemption ENCFF261EAM bigWig signal p-value ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF406OSZ 668556939 ENCODE Processing Pipeline a8541db1b37246f407b41e0fa808a476 https://www.encodeproject.org/files/ENCFF261EAM/@@download/ENCFF261EAM.bigWig GRCh38 released antibody characterized with exemption ENCFF042IDR bigWig signal p-value ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF751UYZ 571556267 ENCODE Processing Pipeline b4b0db8c7cb7050149f02822f86885a5 https://www.encodeproject.org/files/ENCFF042IDR/@@download/ENCFF042IDR.bigWig GRCh38 released antibody characterized with exemption ENCFF369YPB bigWig signal p-value ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF406OSZ, ENCFF751UYZ 650241256 ENCODE Processing Pipeline d6ad433a203a4b9a0c4b6f93f0d8969b https://www.encodeproject.org/files/ENCFF369YPB/@@download/ENCFF369YPB.bigWig GRCh38 released antibody characterized with exemption ENCFF746VCI bigWig fold change over control ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF406OSZ 681972220 ENCODE Processing Pipeline 345ce8e1e100f35c9ee0374d3e1b0710 https://www.encodeproject.org/files/ENCFF746VCI/@@download/ENCFF746VCI.bigWig GRCh38 released antibody characterized with exemption ENCFF266FZD bigWig fold change over control ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF751UYZ 537102244 ENCODE Processing Pipeline c5ab0668b6e6b2fb9f8bacdee1f0e303 https://www.encodeproject.org/files/ENCFF266FZD/@@download/ENCFF266FZD.bigWig GRCh38 released antibody characterized with exemption ENCFF995KYW bigWig fold change over control ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF406OSZ, ENCFF751UYZ 1007233229 ENCODE Processing Pipeline 54162393ca7465b18ddb8fbe961f0c85 https://www.encodeproject.org/files/ENCFF995KYW/@@download/ENCFF995KYW.bigWig GRCh38 released antibody characterized with exemption ENCFF857VWZ bed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF406OSZ 5896557 ENCODE Processing Pipeline 1f4615e539d5a46b52e210351bd99c3c https://www.encodeproject.org/files/ENCFF857VWZ/@@download/ENCFF857VWZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF021MGO bed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF751UYZ 5528172 ENCODE Processing Pipeline 4ed0dd6931b9771703b3258e8e4a6ff5 https://www.encodeproject.org/files/ENCFF021MGO/@@download/ENCFF021MGO.bed.gz GRCh38 released antibody characterized with exemption ENCFF630HDH bed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF406OSZ, ENCFF751UYZ 6601419 ENCODE Processing Pipeline aa86c667d58fc6e5adaaca57ceaf71f3 https://www.encodeproject.org/files/ENCFF630HDH/@@download/ENCFF630HDH.bed.gz GRCh38 released antibody characterized with exemption ENCFF692ANO bigBed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF857VWZ 13318507 ENCODE Processing Pipeline 34dfdfffdddedc7d63457d9ce2bdfb90 https://www.encodeproject.org/files/ENCFF692ANO/@@download/ENCFF692ANO.bigBed GRCh38 released antibody characterized with exemption ENCFF731AHW bigBed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF021MGO 13191904 ENCODE Processing Pipeline 7be99453883c96e822dd5b5d4164721a https://www.encodeproject.org/files/ENCFF731AHW/@@download/ENCFF731AHW.bigBed GRCh38 released antibody characterized with exemption ENCFF354ZIK bigBed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF630HDH 13348398 ENCODE Processing Pipeline 7b5b2e793d34758ff9b32277ad4046c8 https://www.encodeproject.org/files/ENCFF354ZIK/@@download/ENCFF354ZIK.bigBed GRCh38 released antibody characterized with exemption ENCFF957NPF bed narrowPeak conservative idr thresholded peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF021MGO, ENCFF419RSJ, ENCFF630HDH, ENCFF857VWZ 686757 ENCODE Processing Pipeline 215e440a744d25f93ecb4bd6c2990e2b https://www.encodeproject.org/files/ENCFF957NPF/@@download/ENCFF957NPF.bed.gz GRCh38 released antibody characterized with exemption ENCFF094SJQ bed narrowPeak optimal idr thresholded peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF021MGO, ENCFF419RSJ, ENCFF630HDH, ENCFF857VWZ 700345 ENCODE Processing Pipeline c7a1c6737876f8f4da403e41b7f6cbb1 https://www.encodeproject.org/files/ENCFF094SJQ/@@download/ENCFF094SJQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF128HNJ bigBed narrowPeak conservative idr thresholded peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF957NPF 1377022 ENCODE Processing Pipeline 4e82ab3804644d3671d192e6ad7c93ee https://www.encodeproject.org/files/ENCFF128HNJ/@@download/ENCFF128HNJ.bigBed GRCh38 released antibody characterized with exemption ENCFF014YFS bigBed narrowPeak optimal idr thresholded peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF094SJQ 1396974 ENCODE Processing Pipeline 8fc56d07f4e80804cee7d1db5e4468c1 https://www.encodeproject.org/files/ENCFF014YFS/@@download/ENCFF014YFS.bigBed GRCh38 released antibody characterized with exemption ENCFF536KBE bigWig signal p-value ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF944MOK 1282366578 ENCODE Processing Pipeline c42ed666d91d0c1f20f37b148f0b94f6 https://www.encodeproject.org/files/ENCFF536KBE/@@download/ENCFF536KBE.bigWig hg19 released antibody characterized with exemption ENCFF112WLB bigWig signal p-value ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF176IME, ENCFF203ABR 1326658548 ENCODE Processing Pipeline 39926faa5ff2579850eae655525504b6 https://www.encodeproject.org/files/ENCFF112WLB/@@download/ENCFF112WLB.bigWig hg19 released antibody characterized with exemption ENCFF627TBQ bigWig signal p-value ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF176IME, ENCFF203ABR, ENCFF944MOK 1596381826 ENCODE Processing Pipeline 0dc9f8d4194d665befd8df6c068eb108 https://www.encodeproject.org/files/ENCFF627TBQ/@@download/ENCFF627TBQ.bigWig hg19 released antibody characterized with exemption ENCFF131OTG bigWig fold change over control ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF944MOK 1223065758 ENCODE Processing Pipeline bc23c3fd4161de41d6f74d49f4365db9 https://www.encodeproject.org/files/ENCFF131OTG/@@download/ENCFF131OTG.bigWig hg19 released antibody characterized with exemption ENCFF556LWP bigWig fold change over control ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF176IME, ENCFF203ABR 984525800 ENCODE Processing Pipeline 4e135add2dd65c82be15140f3902574a https://www.encodeproject.org/files/ENCFF556LWP/@@download/ENCFF556LWP.bigWig hg19 released antibody characterized with exemption ENCFF668EYP bigWig fold change over control ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF176IME, ENCFF203ABR, ENCFF944MOK 1637234252 ENCODE Processing Pipeline a90e12fcddef4f01722a26f3921ed422 https://www.encodeproject.org/files/ENCFF668EYP/@@download/ENCFF668EYP.bigWig hg19 released antibody characterized with exemption ENCFF699AFQ bed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF944MOK 6476005 ENCODE Processing Pipeline 671fdbb6a8889905076c9c1040357172 https://www.encodeproject.org/files/ENCFF699AFQ/@@download/ENCFF699AFQ.bed.gz hg19 released antibody characterized with exemption ENCFF880JAA bed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF176IME, ENCFF203ABR 6026446 ENCODE Processing Pipeline 20222ccfe560daa508009531a5a9f799 https://www.encodeproject.org/files/ENCFF880JAA/@@download/ENCFF880JAA.bed.gz hg19 released antibody characterized with exemption ENCFF455SWX bed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF176IME, ENCFF203ABR, ENCFF944MOK 6903447 ENCODE Processing Pipeline 2a20ddb3b47299ea6a9aaa053bab6cb5 https://www.encodeproject.org/files/ENCFF455SWX/@@download/ENCFF455SWX.bed.gz hg19 released antibody characterized with exemption ENCFF351ZFA bigBed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF455SWX 13397779 ENCODE Processing Pipeline 02f87cdf161bb51f114d610b09eba67e https://www.encodeproject.org/files/ENCFF351ZFA/@@download/ENCFF351ZFA.bigBed hg19 released antibody characterized with exemption ENCFF395KFU bigBed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF699AFQ 13313141 ENCODE Processing Pipeline 4368add71aac8924f7547676e5d54548 https://www.encodeproject.org/files/ENCFF395KFU/@@download/ENCFF395KFU.bigBed hg19 released antibody characterized with exemption ENCFF418KXG bigBed narrowPeak peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF880JAA 11014879 ENCODE Processing Pipeline 4b415fd3a41a954be211c891daac2572 https://www.encodeproject.org/files/ENCFF418KXG/@@download/ENCFF418KXG.bigBed hg19 released antibody characterized with exemption ENCFF071CAN bigBed narrowPeak conservative idr thresholded peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF841SYA 1105708 ENCODE Processing Pipeline 981c0a7f373899ef22f495f44a335d09 https://www.encodeproject.org/files/ENCFF071CAN/@@download/ENCFF071CAN.bigBed hg19 released antibody characterized with exemption ENCFF841SYA bed narrowPeak conservative idr thresholded peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF455SWX, ENCFF699AFQ, ENCFF880JAA 665195 ENCODE Processing Pipeline 0d3434528ca0ac4b555f45cdeaab33e7 https://www.encodeproject.org/files/ENCFF841SYA/@@download/ENCFF841SYA.bed.gz hg19 released antibody characterized with exemption ENCFF292KYR bed narrowPeak optimal idr thresholded peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF455SWX, ENCFF699AFQ, ENCFF880JAA 676701 ENCODE Processing Pipeline 819fa3d0d5f6d46911a4a26829c03166 https://www.encodeproject.org/files/ENCFF292KYR/@@download/ENCFF292KYR.bed.gz hg19 released antibody characterized with exemption ENCFF765UXO bigBed narrowPeak optimal idr thresholded peaks ENCSR639IIZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF292KYR 1120453 ENCODE Processing Pipeline 2a97382d510b3a46261a4748053d3303 https://www.encodeproject.org/files/ENCFF765UXO/@@download/ENCFF765UXO.bigBed hg19 released antibody characterized with exemption ENCFF134IZQ fastq reads ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 1144543613 Richard Myers, HAIB e29fde4f4dcc09a40467c0cdc6a51842 SRA:SRR5339086 https://www.encodeproject.org/files/ENCFF134IZQ/@@download/ENCFF134IZQ.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF096HOR fastq reads ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1009759704 Richard Myers, HAIB 209380235e939bf9d2c97827546197d5 SRA:SRR5339087 https://www.encodeproject.org/files/ENCFF096HOR/@@download/ENCFF096HOR.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF600ZGX bigWig signal p-value ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF606ZAJ 426982615 ENCODE Processing Pipeline caef4eddf55dc12b9cd406fa306b1af1 https://www.encodeproject.org/files/ENCFF600ZGX/@@download/ENCFF600ZGX.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF622TCN bigWig fold change over control ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF606ZAJ 377416629 ENCODE Processing Pipeline 9eab1f6b91e2c6df15cf1f15051c95e9 https://www.encodeproject.org/files/ENCFF622TCN/@@download/ENCFF622TCN.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF812TKD bigWig signal p-value ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF455FCE, ENCFF606ZAJ 456845957 ENCODE Processing Pipeline fa413068ff455bf79def29b849ac19b4 https://www.encodeproject.org/files/ENCFF812TKD/@@download/ENCFF812TKD.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF970TCG bigWig fold change over control ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF455FCE, ENCFF606ZAJ 692104826 ENCODE Processing Pipeline 6acbd2a08ced57517abb96501aa69874 https://www.encodeproject.org/files/ENCFF970TCG/@@download/ENCFF970TCG.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF724JVY bam unfiltered alignments ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF096HOR, ENCFF643CGH 1167646288 ENCODE Processing Pipeline cc86f97202362c850e8350868c281c5e https://www.encodeproject.org/files/ENCFF724JVY/@@download/ENCFF724JVY.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF672SRH bam unfiltered alignments ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF134IZQ, ENCFF643CGH 1315813448 ENCODE Processing Pipeline 197a3f0a9ce4463640338204fdb7f03b https://www.encodeproject.org/files/ENCFF672SRH/@@download/ENCFF672SRH.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF209RNM bam alignments ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF096HOR, ENCFF643CGH 888988940 ENCODE Processing Pipeline 8f49d3a3f7c3ba6478df41f47cbed61e https://www.encodeproject.org/files/ENCFF209RNM/@@download/ENCFF209RNM.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF233III bam alignments ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF134IZQ, ENCFF643CGH 1011712675 ENCODE Processing Pipeline ea77e2e536c2216be9795892c1496464 https://www.encodeproject.org/files/ENCFF233III/@@download/ENCFF233III.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF282RQA bigWig signal p-value ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF209RNM, ENCFF582CVJ 427192110 ENCODE Processing Pipeline 87adfac9ed054d2ef7f14a653acfe629 https://www.encodeproject.org/files/ENCFF282RQA/@@download/ENCFF282RQA.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF761EBT bigWig signal p-value ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF233III, ENCFF582CVJ 466066748 ENCODE Processing Pipeline 3927f52f0839219fc0a06785ffcc8c4f https://www.encodeproject.org/files/ENCFF761EBT/@@download/ENCFF761EBT.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF035XFG bigWig signal p-value ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF209RNM, ENCFF233III, ENCFF582CVJ 456848676 ENCODE Processing Pipeline a81ee9d440c3a622e0aa6573d1bd5fe3 https://www.encodeproject.org/files/ENCFF035XFG/@@download/ENCFF035XFG.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF400UVI bigWig fold change over control ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF209RNM, ENCFF582CVJ 375800579 ENCODE Processing Pipeline 3d9becf8cc9d731e45833b0155a28e74 https://www.encodeproject.org/files/ENCFF400UVI/@@download/ENCFF400UVI.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF306IHM bed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF233III, ENCFF582CVJ 4894198 ENCODE Processing Pipeline f938443985e9af06ef32f68fdcb53f8a https://www.encodeproject.org/files/ENCFF306IHM/@@download/ENCFF306IHM.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF744DQP bigWig fold change over control ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF209RNM, ENCFF233III, ENCFF582CVJ 703616522 ENCODE Processing Pipeline 7750da5a45425590028afc5c543508f7 https://www.encodeproject.org/files/ENCFF744DQP/@@download/ENCFF744DQP.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF124BJZ bed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF209RNM, ENCFF582CVJ 4827823 ENCODE Processing Pipeline 559d645e945bb12410df56fb76613318 https://www.encodeproject.org/files/ENCFF124BJZ/@@download/ENCFF124BJZ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF498MEI bigWig fold change over control ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF233III, ENCFF582CVJ 437480385 ENCODE Processing Pipeline 5979503e98ee9a5448c6c2baab09de08 https://www.encodeproject.org/files/ENCFF498MEI/@@download/ENCFF498MEI.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF022VXY bed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF209RNM, ENCFF233III, ENCFF582CVJ 5739002 ENCODE Processing Pipeline 8f50b1f14a46660e01b8927886ca5c32 https://www.encodeproject.org/files/ENCFF022VXY/@@download/ENCFF022VXY.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF394XXK bigBed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF306IHM 10864993 ENCODE Processing Pipeline 1fa3c1cc509d75c39b78d7e3ce8acb06 https://www.encodeproject.org/files/ENCFF394XXK/@@download/ENCFF394XXK.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF064VYZ bigBed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF124BJZ 10871728 ENCODE Processing Pipeline 6bb5f2b40749a67879a492cb99c47aa0 https://www.encodeproject.org/files/ENCFF064VYZ/@@download/ENCFF064VYZ.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF318JJJ bigBed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF022VXY 13376421 ENCODE Processing Pipeline 8b473b22ba48edc2dc4db77c5f8660ed https://www.encodeproject.org/files/ENCFF318JJJ/@@download/ENCFF318JJJ.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF207CLF bed narrowPeak optimal idr thresholded peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF022VXY, ENCFF124BJZ, ENCFF306IHM, ENCFF419RSJ 150299 ENCODE Processing Pipeline 004a1bb32c3d90958e9b69189fe4f993 https://www.encodeproject.org/files/ENCFF207CLF/@@download/ENCFF207CLF.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF347YSC bigBed narrowPeak optimal idr thresholded peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF207CLF 334284 ENCODE Processing Pipeline fa555b0fa1fe9e9c745443a6eac014a6 https://www.encodeproject.org/files/ENCFF347YSC/@@download/ENCFF347YSC.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF787BEJ bam unfiltered alignments ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF096HOR, ENCFF807MUK 1162752421 ENCODE Processing Pipeline 8d902ba184bed4fb3568077fd59e3862 https://www.encodeproject.org/files/ENCFF787BEJ/@@download/ENCFF787BEJ.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF900NYR bam unfiltered alignments ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF134IZQ, ENCFF807MUK 1310404690 ENCODE Processing Pipeline 0d166799cdf4d088c6a71da6c0e32fe6 https://www.encodeproject.org/files/ENCFF900NYR/@@download/ENCFF900NYR.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF606ZAJ bam alignments ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF096HOR, ENCFF807MUK 888926028 ENCODE Processing Pipeline bebe0a87636faf45d7a456ddb31fbcbe https://www.encodeproject.org/files/ENCFF606ZAJ/@@download/ENCFF606ZAJ.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF455FCE bam alignments ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF134IZQ, ENCFF807MUK 1011638566 ENCODE Processing Pipeline 11521044bf8510823db572a13e838940 https://www.encodeproject.org/files/ENCFF455FCE/@@download/ENCFF455FCE.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF233YJW bigWig signal p-value ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF455FCE 448966440 ENCODE Processing Pipeline 7664f2f84def4f447a9906c25334424a https://www.encodeproject.org/files/ENCFF233YJW/@@download/ENCFF233YJW.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF120WWX bigWig fold change over control ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF455FCE 413923524 ENCODE Processing Pipeline 845afc2f5c331f5d6ed973f0136518ae https://www.encodeproject.org/files/ENCFF120WWX/@@download/ENCFF120WWX.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF951JQE bed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF606ZAJ 4863345 ENCODE Processing Pipeline f2e1c6a0738cd3a86f7b818d77934019 https://www.encodeproject.org/files/ENCFF951JQE/@@download/ENCFF951JQE.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF778JVV bed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF455FCE 4899504 ENCODE Processing Pipeline 8ff62ab3cd20a8f08c8c09deea1f1b79 https://www.encodeproject.org/files/ENCFF778JVV/@@download/ENCFF778JVV.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF317NTX bed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF455FCE, ENCFF606ZAJ 5731841 ENCODE Processing Pipeline 5cdedf993ed45de7f03070a0942d18a1 https://www.encodeproject.org/files/ENCFF317NTX/@@download/ENCFF317NTX.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF859WBX bigBed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF951JQE 10865467 ENCODE Processing Pipeline 3468e8df7ba27383e6a5b2a4df17f397 https://www.encodeproject.org/files/ENCFF859WBX/@@download/ENCFF859WBX.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF673SWS bigBed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF778JVV 10861557 ENCODE Processing Pipeline 27585b6244a88875d7657949c8ac7d22 https://www.encodeproject.org/files/ENCFF673SWS/@@download/ENCFF673SWS.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF694GFP bigBed narrowPeak peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF317NTX 13362208 ENCODE Processing Pipeline 01154fbdc443ca9860e01c92d2b4968c https://www.encodeproject.org/files/ENCFF694GFP/@@download/ENCFF694GFP.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF786OZJ bed narrowPeak conservative idr thresholded peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF317NTX, ENCFF778JVV, ENCFF951JQE 145247 ENCODE Processing Pipeline 63fffb2b95071b739430ff0bf6350546 https://www.encodeproject.org/files/ENCFF786OZJ/@@download/ENCFF786OZJ.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF395ABY bigBed narrowPeak conservative idr thresholded peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF786OZJ 327120 ENCODE Processing Pipeline 04b3c9809c112906ece65a22b2ba1fb4 https://www.encodeproject.org/files/ENCFF395ABY/@@download/ENCFF395ABY.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF930DKI bed narrowPeak optimal idr thresholded peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF317NTX, ENCFF778JVV, ENCFF951JQE 147187 ENCODE Processing Pipeline f9a4f8231a7185827fb5ffa320058755 https://www.encodeproject.org/files/ENCFF930DKI/@@download/ENCFF930DKI.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF778ZXL bigBed narrowPeak optimal idr thresholded peaks ENCSR656JZL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HHEX-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF930DKI 330258 ENCODE Processing Pipeline 51a989e755fcf269de94b7f79d5aec5a https://www.encodeproject.org/files/ENCFF778ZXL/@@download/ENCFF778ZXL.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption ENCFF000OPV bam alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OQA 505133530 Richard Myers, HAIB eb7fe5aea09900c311dd52477868f715 https://www.encodeproject.org/files/ENCFF000OPV/@@download/ENCFF000OPV.bam hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OPW bam alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OQM 1341718019 Richard Myers, HAIB 8349fa251c36cf29352c5f9753ec6e2a https://www.encodeproject.org/files/ENCFF000OPW/@@download/ENCFF000OPW.bam hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OPX bigBed broadPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UBQ 151119 Richard Myers, HAIB 00f9afa6014693426d82dbe77a79c6da https://www.encodeproject.org/files/ENCFF000OPX/@@download/ENCFF000OPX.bigBed hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OPY bigBed broadPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UBR 363003 Richard Myers, HAIB 395ee8576a996d2c6f5a948182d02075 https://www.encodeproject.org/files/ENCFF000OPY/@@download/ENCFF000OPY.bigBed hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OQA fastq reads ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 406987405 Richard Myers, HAIB 12446ce8f52c7c09feaac27df2a62d03 https://www.encodeproject.org/files/ENCFF000OQA/@@download/ENCFF000OQA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OQB bigWig raw signal ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 1 2160379 Richard Myers, HAIB 2c996e802b074c78adb830a3b22cab9e https://www.encodeproject.org/files/ENCFF000OQB/@@download/ENCFF000OQB.bigWig hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OQC bigWig raw signal ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 1 52816958 Richard Myers, HAIB f9ca910af5478f1281a526b5c5754837 https://www.encodeproject.org/files/ENCFF000OQC/@@download/ENCFF000OQC.bigWig hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OQM fastq reads ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1978546398 Richard Myers, HAIB 9c2e400bedccce4ffab347623500b3d4 https://www.encodeproject.org/files/ENCFF000OQM/@@download/ENCFF000OQM.fastq.gz HiSeq 2000 /files/ENCFF000OSP/ released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001UBQ bed broadPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 1 75298 Richard Myers, HAIB 35d56c1f3266cb11c02f324939f3bdfc https://www.encodeproject.org/files/ENCFF001UBQ/@@download/ENCFF001UBQ.bed.gz hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001UBR bed broadPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 1 212860 Richard Myers, HAIB 17bdba13c874c419de734083000ff7cf https://www.encodeproject.org/files/ENCFF001UBR/@@download/ENCFF001UBR.bed.gz hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF002CJA bed narrowPeak optimal idr thresholded peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 108870 ENCODE Consortium Analysis Working Group 85375df67cc6902a9b09a7f7537c81f4 https://www.encodeproject.org/files/ENCFF002CJA/@@download/ENCFF002CJA.bed.gz hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking missing derived_from, characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF072TVJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE ENCFF002CJA 244688 ENCODE Consortium 3de0d78155479f4c65c055e7dc0d29ac https://www.encodeproject.org/files/ENCFF072TVJ/@@download/ENCFF072TVJ.bigBed hg19 archived inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF691GHU bam unfiltered alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQA, ENCFF643CGH 577401033 ENCODE Processing Pipeline 2c03af06111de723dd1b72c658229f0f https://www.encodeproject.org/files/ENCFF691GHU/@@download/ENCFF691GHU.bam GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF805SCJ bam alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQA, ENCFF643CGH 384671859 ENCODE Processing Pipeline 873c690d546fc5e6c2e3950288bfc164 https://www.encodeproject.org/files/ENCFF805SCJ/@@download/ENCFF805SCJ.bam GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF915EXK bam unfiltered alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OQM, ENCFF643CGH 2141750846 ENCODE Processing Pipeline 422be47c6450a51581ac8d305a072ac6 https://www.encodeproject.org/files/ENCFF915EXK/@@download/ENCFF915EXK.bam GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF309DIF bam alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OQM, ENCFF643CGH 342050881 ENCODE Processing Pipeline 87b12168549ed3ccb174cc8588916a73 https://www.encodeproject.org/files/ENCFF309DIF/@@download/ENCFF309DIF.bam GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF015LGN bam alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQA, ENCFF807MUK 384999991 ENCODE Processing Pipeline 8bd0c34d671299bf275482a2fbd2ac24 https://www.encodeproject.org/files/ENCFF015LGN/@@download/ENCFF015LGN.bam hg19 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF787ANY bam unfiltered alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OQA, ENCFF807MUK 575591395 ENCODE Processing Pipeline 4fafa45575dd549894377304489549b9 https://www.encodeproject.org/files/ENCFF787ANY/@@download/ENCFF787ANY.bam hg19 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF184OIJ bam unfiltered alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OQM, ENCFF807MUK 2138836649 ENCODE Processing Pipeline ff7ea745a903d3bbcd622e0a67115ff8 https://www.encodeproject.org/files/ENCFF184OIJ/@@download/ENCFF184OIJ.bam hg19 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF909PBK bam alignments ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OQM, ENCFF807MUK 342472928 ENCODE Processing Pipeline d48d8ecaac7edb582298e4006f04f0cb https://www.encodeproject.org/files/ENCFF909PBK/@@download/ENCFF909PBK.bam hg19 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF253DOB bigWig signal p-value ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF309DIF, ENCFF805SCJ, ENCFF948LKH 547178497 ENCODE Processing Pipeline 29b53414b7ed33f07cce9c1399207962 https://www.encodeproject.org/files/ENCFF253DOB/@@download/ENCFF253DOB.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF039GQK bigWig signal p-value ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF805SCJ, ENCFF948LKH 459306934 ENCODE Processing Pipeline 1b5e531b9329369e45d8e5a1d79360d2 https://www.encodeproject.org/files/ENCFF039GQK/@@download/ENCFF039GQK.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF222JAV bed narrowPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF805SCJ, ENCFF948LKH 3537354 ENCODE Processing Pipeline f9b033b0137c0c965ac8962b62e6f737 https://www.encodeproject.org/files/ENCFF222JAV/@@download/ENCFF222JAV.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF300PIT bigWig signal p-value ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF309DIF, ENCFF948LKH 369396271 ENCODE Processing Pipeline e974c948132b87e351d26502e5289ba3 https://www.encodeproject.org/files/ENCFF300PIT/@@download/ENCFF300PIT.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF479ERO bigWig fold change over control ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF805SCJ, ENCFF948LKH 229604772 ENCODE Processing Pipeline 803b284f8ccbfa505b432cf9b0329ae6 https://www.encodeproject.org/files/ENCFF479ERO/@@download/ENCFF479ERO.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF164RER bed narrowPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF309DIF, ENCFF948LKH 4111221 ENCODE Processing Pipeline 17963df70b24c3baf43341ec0e62869d https://www.encodeproject.org/files/ENCFF164RER/@@download/ENCFF164RER.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF100JPR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF722JFZ 181959 ENCODE Processing Pipeline 3609d0751d69b697125b4377e48ddfb2 https://www.encodeproject.org/files/ENCFF100JPR/@@download/ENCFF100JPR.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF884GXB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF794GVQ 290043 ENCODE Processing Pipeline a6e9a52c2237d434aeba6e68fc6ca4e5 https://www.encodeproject.org/files/ENCFF884GXB/@@download/ENCFF884GXB.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF305LHR bigWig fold change over control ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF309DIF, ENCFF805SCJ, ENCFF948LKH 370513374 ENCODE Processing Pipeline 7f7563f134a8bd8749694dad532a100a https://www.encodeproject.org/files/ENCFF305LHR/@@download/ENCFF305LHR.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF083BVI bigBed narrowPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF222JAV 7509353 ENCODE Processing Pipeline 64181e366229f9156620b2a52d91fb8d https://www.encodeproject.org/files/ENCFF083BVI/@@download/ENCFF083BVI.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF022BJX bigBed narrowPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF164RER 10010855 ENCODE Processing Pipeline f99f30c79bd250ebb4eab5a66eda4705 https://www.encodeproject.org/files/ENCFF022BJX/@@download/ENCFF022BJX.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF082LGX bigWig fold change over control ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF309DIF, ENCFF948LKH 175845515 ENCODE Processing Pipeline 3b83b90bf4467fef0f3a832373bb17be https://www.encodeproject.org/files/ENCFF082LGX/@@download/ENCFF082LGX.bigWig GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF355IFS bed narrowPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF309DIF, ENCFF805SCJ, ENCFF948LKH 4798788 ENCODE Processing Pipeline 55adbb8213b899dba930ba4d4ab26316 https://www.encodeproject.org/files/ENCFF355IFS/@@download/ENCFF355IFS.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF134VMH bigBed narrowPeak peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF355IFS 11019870 ENCODE Processing Pipeline d61082d5868a0ffffec005750f1671ca https://www.encodeproject.org/files/ENCFF134VMH/@@download/ENCFF134VMH.bigBed GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF722JFZ bed narrowPeak conservative idr thresholded peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF164RER, ENCFF222JAV, ENCFF355IFS, ENCFF419RSJ 91365 ENCODE Processing Pipeline 672be7cd2a45d4a677dbe6d1a3822ea9 https://www.encodeproject.org/files/ENCFF722JFZ/@@download/ENCFF722JFZ.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF794GVQ bed narrowPeak optimal idr thresholded peaks ENCSR000BMT ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens NANOG-human ENCAB000AIX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF164RER, ENCFF222JAV, ENCFF355IFS, ENCFF419RSJ 139159 ENCODE Processing Pipeline 7d86f995b39984be80c7f701ba3f671e https://www.encodeproject.org/files/ENCFF794GVQ/@@download/ENCFF794GVQ.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth, mild to moderate bottlenecking characterization(s) pending review, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OUH bam alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OUU 802896201 Richard Myers, HAIB ec5dc769aacc4058181ab55ea72b44e3 https://www.encodeproject.org/files/ENCFF000OUH/@@download/ENCFF000OUH.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OUJ bigBed broadPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCQ 137553 Richard Myers, HAIB 211c556bf045cdcaee43fd82089a6c9e https://www.encodeproject.org/files/ENCFF000OUJ/@@download/ENCFF000OUJ.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OUK bigBed broadPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCR 117064 Richard Myers, HAIB a835162f4079ceb88e5b95369917b18e https://www.encodeproject.org/files/ENCFF000OUK/@@download/ENCFF000OUK.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OUM bam alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OUX 800698954 Richard Myers, HAIB 9c01cdb1ff38f78267a386b6e0faf1f6 https://www.encodeproject.org/files/ENCFF000OUM/@@download/ENCFF000OUM.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OUN bigWig raw signal ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 6475822 Richard Myers, HAIB 09d1200080801e7cdcda25fee75e3e45 https://www.encodeproject.org/files/ENCFF000OUN/@@download/ENCFF000OUN.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000OUP bigWig raw signal ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 6673120 Richard Myers, HAIB 09891327324c54421d4c819ca1222d88 https://www.encodeproject.org/files/ENCFF000OUP/@@download/ENCFF000OUP.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000OUU fastq reads ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 692440619 Richard Myers, HAIB f0e3b5b527a7d9639c9704280d99d29c https://www.encodeproject.org/files/ENCFF000OUU/@@download/ENCFF000OUU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000OUX fastq reads ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 695223022 Richard Myers, HAIB 71090847061a193a021debcb2c45fc13 https://www.encodeproject.org/files/ENCFF000OUX/@@download/ENCFF000OUX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001UCQ bed broadPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 66501 Richard Myers, HAIB 029a539b1f05cee82d67ffd42eaa9f02 https://www.encodeproject.org/files/ENCFF001UCQ/@@download/ENCFF001UCQ.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UCR bed broadPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 50700 Richard Myers, HAIB 926f44ff0330a5675b019fb8a721b790 https://www.encodeproject.org/files/ENCFF001UCR/@@download/ENCFF001UCR.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CJN bed narrowPeak optimal idr thresholded peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 103006 ENCODE Consortium Analysis Working Group a5858b2044edbdf6772f3c51c1a42214 https://www.encodeproject.org/files/ENCFF002CJN/@@download/ENCFF002CJN.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF391RQV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE ENCFF002CJN 244360 ENCODE Consortium 69eeb2df37d5a3ad3015d3caf5ad1b29 https://www.encodeproject.org/files/ENCFF391RQV/@@download/ENCFF391RQV.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF160PEL bam unfiltered alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OUU, ENCFF643CGH 962294368 ENCODE Processing Pipeline 2888d50c55b6734a36b398ae5f6cff91 https://www.encodeproject.org/files/ENCFF160PEL/@@download/ENCFF160PEL.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF519XKL bam unfiltered alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OUX, ENCFF643CGH 909388314 ENCODE Processing Pipeline 2df2a0cbfecce3dd5c38755ca680d356 https://www.encodeproject.org/files/ENCFF519XKL/@@download/ENCFF519XKL.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF890OOH bam alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OUX, ENCFF643CGH 368406397 ENCODE Processing Pipeline 44cdbf56e76fb362f4a078683d02725c https://www.encodeproject.org/files/ENCFF890OOH/@@download/ENCFF890OOH.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF575DNN bam alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OUU, ENCFF643CGH 553938593 ENCODE Processing Pipeline e6b90c1b1ffe18cf51aa0b6433c395b5 https://www.encodeproject.org/files/ENCFF575DNN/@@download/ENCFF575DNN.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF735MSB bam alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OUX, ENCFF807MUK 368670106 ENCODE Processing Pipeline 721ecca1b71e307e8f383f5a46a6bb89 https://www.encodeproject.org/files/ENCFF735MSB/@@download/ENCFF735MSB.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF314GBK bam unfiltered alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OUX, ENCFF807MUK 905394965 ENCODE Processing Pipeline db870edb0f39473e85670451a5e30cbe https://www.encodeproject.org/files/ENCFF314GBK/@@download/ENCFF314GBK.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF714CGS bam alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OUU, ENCFF807MUK 554170145 ENCODE Processing Pipeline 0e265c6a3802cf99c64a6c768a9abf5e https://www.encodeproject.org/files/ENCFF714CGS/@@download/ENCFF714CGS.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF372HNB bam unfiltered alignments ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OUU, ENCFF807MUK 958788190 ENCODE Processing Pipeline d5143ea25ba184cced04775f4675c706 https://www.encodeproject.org/files/ENCFF372HNB/@@download/ENCFF372HNB.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF991QNZ bigWig signal p-value ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF890OOH, ENCFF948LKH 420133993 ENCODE Processing Pipeline 667da0743e100b7cba497e45f79f3edd https://www.encodeproject.org/files/ENCFF991QNZ/@@download/ENCFF991QNZ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF042THE bigWig signal p-value ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF575DNN, ENCFF948LKH 518629432 ENCODE Processing Pipeline 25fe93d80ddd48780d33aa27fb97805c https://www.encodeproject.org/files/ENCFF042THE/@@download/ENCFF042THE.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF257UEB bigWig signal p-value ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF575DNN, ENCFF890OOH, ENCFF948LKH 549211068 ENCODE Processing Pipeline e0361b6e2658658fb6e4388191e2e2d9 https://www.encodeproject.org/files/ENCFF257UEB/@@download/ENCFF257UEB.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF996WRR bigWig fold change over control ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF575DNN, ENCFF948LKH 348408509 ENCODE Processing Pipeline 36829fd374d1f8f0f1244949cfe258b8 https://www.encodeproject.org/files/ENCFF996WRR/@@download/ENCFF996WRR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF556LAR bigWig fold change over control ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF890OOH, ENCFF948LKH 236911325 ENCODE Processing Pipeline 7428c628dd5d75b22e4e6fba90207599 https://www.encodeproject.org/files/ENCFF556LAR/@@download/ENCFF556LAR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF941KEV bigWig fold change over control ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF575DNN, ENCFF890OOH, ENCFF948LKH 516160777 ENCODE Processing Pipeline 36b988ed87ef9e4f830afffe306b09b2 https://www.encodeproject.org/files/ENCFF941KEV/@@download/ENCFF941KEV.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF993FKD bed narrowPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF575DNN, ENCFF948LKH 3839878 ENCODE Processing Pipeline 92b1076560edae8ad4dba23aed164f85 https://www.encodeproject.org/files/ENCFF993FKD/@@download/ENCFF993FKD.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF172RUG bed narrowPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF890OOH, ENCFF948LKH 3848340 ENCODE Processing Pipeline ae97b4ff118125f0abb0849452bf7e88 https://www.encodeproject.org/files/ENCFF172RUG/@@download/ENCFF172RUG.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF069VMV bigBed narrowPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF993FKD 8483354 ENCODE Processing Pipeline 3aac49e018c96d919c9dff10623f11fb https://www.encodeproject.org/files/ENCFF069VMV/@@download/ENCFF069VMV.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF814WQX bed narrowPeak conservative idr thresholded peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF172RUG, ENCFF303NCA, ENCFF419RSJ, ENCFF993FKD 81064 ENCODE Processing Pipeline 8f03c55e14d8c9a8796e628510c98800 https://www.encodeproject.org/files/ENCFF814WQX/@@download/ENCFF814WQX.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF303NCA bed narrowPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF575DNN, ENCFF890OOH, ENCFF948LKH 4274508 ENCODE Processing Pipeline 7aa59444cc860a7723a4756bb3a7c145 https://www.encodeproject.org/files/ENCFF303NCA/@@download/ENCFF303NCA.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF751NVH bigBed narrowPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF172RUG 8381066 ENCODE Processing Pipeline 66d5892f25f26463f95f8bfc04cbf7ae https://www.encodeproject.org/files/ENCFF751NVH/@@download/ENCFF751NVH.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF854QYP bigBed narrowPeak peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF303NCA 11043139 ENCODE Processing Pipeline ae402789ecdfba4e08ec741ef7123467 https://www.encodeproject.org/files/ENCFF854QYP/@@download/ENCFF854QYP.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF582KQD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF814WQX 170416 ENCODE Processing Pipeline 96bf16368e53d444254ba5c9c05746fa https://www.encodeproject.org/files/ENCFF582KQD/@@download/ENCFF582KQD.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF368SFI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF345IDL 234132 ENCODE Processing Pipeline 64a469bcd6345027f2f5596a28dff6f7 https://www.encodeproject.org/files/ENCFF368SFI/@@download/ENCFF368SFI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF345IDL bed narrowPeak optimal idr thresholded peaks ENCSR000BIV ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF172RUG, ENCFF303NCA, ENCFF419RSJ, ENCFF993FKD 97696 ENCODE Processing Pipeline 42c991348384d45a505fa2cf2a6e35ff https://www.encodeproject.org/files/ENCFF345IDL/@@download/ENCFF345IDL.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NOO bam alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NOW 599215083 Richard Myers, HAIB 10a6520269a6ddc072844bed97d3d90a https://www.encodeproject.org/files/ENCFF000NOO/@@download/ENCFF000NOO.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NOP bam alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NPB 887593352 Richard Myers, HAIB 8bee90db4e4afb962346ce387b325471 https://www.encodeproject.org/files/ENCFF000NOP/@@download/ENCFF000NOP.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NOQ bigBed broadPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TVJ 670104 Richard Myers, HAIB 8124dea5daba777b4f71ad015f73037e https://www.encodeproject.org/files/ENCFF000NOQ/@@download/ENCFF000NOQ.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NOR bigBed broadPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TVK 945986 Richard Myers, HAIB bd9ff01c00ca51d1339c124cd313a50d https://www.encodeproject.org/files/ENCFF000NOR/@@download/ENCFF000NOR.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NOU bigWig raw signal ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 13889274 Richard Myers, HAIB e03e2a925ef6ce7a843a07f7113046ef https://www.encodeproject.org/files/ENCFF000NOU/@@download/ENCFF000NOU.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NOV bigWig raw signal ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 45445592 Richard Myers, HAIB f663b04f62bd58919d97bf9a7d80cb89 https://www.encodeproject.org/files/ENCFF000NOV/@@download/ENCFF000NOV.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NOW fastq reads ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 534060512 Richard Myers, HAIB 7692ec02a9e7547d2a2083072684d3b0 https://www.encodeproject.org/files/ENCFF000NOW/@@download/ENCFF000NOW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NPN/ released low read length, low read depth biological replicates with identical biosample ENCFF000NPB fastq reads ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 842828144 Richard Myers, HAIB 8cdde3bf00058a804b8c8622a4bb1ff2 https://www.encodeproject.org/files/ENCFF000NPB/@@download/ENCFF000NPB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NPN/ released low read length, low read depth biological replicates with identical biosample ENCFF001TVJ bed broadPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 341119 Richard Myers, HAIB d08ab28b0b38893df44deea3646f92de https://www.encodeproject.org/files/ENCFF001TVJ/@@download/ENCFF001TVJ.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TVK bed broadPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 570223 Richard Myers, HAIB 748e36fc97e0cb87191282bd930506e0 https://www.encodeproject.org/files/ENCFF001TVK/@@download/ENCFF001TVK.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CGN bed narrowPeak optimal idr thresholded peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 418175 ENCODE Consortium Analysis Working Group 36b7722603f1d56d75d0843e8ef1ee81 https://www.encodeproject.org/files/ENCFF002CGN/@@download/ENCFF002CGN.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF729FCI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CGN 1084380 ENCODE Consortium 7fcd9d9db65ebfbf1f7f47839cfc51e8 https://www.encodeproject.org/files/ENCFF729FCI/@@download/ENCFF729FCI.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF891QWY bam unfiltered alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NOW, ENCFF643CGH 719191141 ENCODE Processing Pipeline 8ae8ce4210b57e9415f4a0952c00ceab https://www.encodeproject.org/files/ENCFF891QWY/@@download/ENCFF891QWY.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF631EDC bam alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NOW, ENCFF643CGH 488491027 ENCODE Processing Pipeline 79b70a434137d61163259be9b72f2035 https://www.encodeproject.org/files/ENCFF631EDC/@@download/ENCFF631EDC.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF341KQG bam unfiltered alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NPB, ENCFF643CGH 1076336301 ENCODE Processing Pipeline a4c9a824c95b4eb9a69d63cf17c8d773 https://www.encodeproject.org/files/ENCFF341KQG/@@download/ENCFF341KQG.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF387CSW bam alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NPB, ENCFF643CGH 623675694 ENCODE Processing Pipeline 0a9bfe8211eb73ae3ad9020e62493d9b https://www.encodeproject.org/files/ENCFF387CSW/@@download/ENCFF387CSW.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF689PQQ bam unfiltered alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NOW, ENCFF807MUK 717859966 ENCODE Processing Pipeline 3e1e52333d1980f60fd6023b82cb41c9 https://www.encodeproject.org/files/ENCFF689PQQ/@@download/ENCFF689PQQ.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF115HFB bam alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NOW, ENCFF807MUK 488790698 ENCODE Processing Pipeline aec7b04cf2d0256000634d16d8c3ac92 https://www.encodeproject.org/files/ENCFF115HFB/@@download/ENCFF115HFB.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF106HZS bam unfiltered alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NPB, ENCFF807MUK 1075761702 ENCODE Processing Pipeline fdc127b425f7ba7ae9dc43408aaaa310 https://www.encodeproject.org/files/ENCFF106HZS/@@download/ENCFF106HZS.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF837IWA bam alignments ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NPB, ENCFF807MUK 624076878 ENCODE Processing Pipeline 03abeee9a77933f9e60464f0ba45f10f https://www.encodeproject.org/files/ENCFF837IWA/@@download/ENCFF837IWA.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF263MOU bigWig signal p-value ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF016HFH, ENCFF631EDC 402224026 ENCODE Processing Pipeline 9b574d4cc28ba67c30e963cc0b862610 https://www.encodeproject.org/files/ENCFF263MOU/@@download/ENCFF263MOU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF457EWA bigWig signal p-value ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF016HFH, ENCFF387CSW, ENCFF631EDC 579405944 ENCODE Processing Pipeline 70e3bf3b47fa772b8b7fbbee6392044d https://www.encodeproject.org/files/ENCFF457EWA/@@download/ENCFF457EWA.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF593WMY bigBed narrowPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF949XMC 12547129 ENCODE Processing Pipeline 2164f8625720e58085bc30c7affbf8e2 https://www.encodeproject.org/files/ENCFF593WMY/@@download/ENCFF593WMY.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF061OCK bigBed narrowPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF907CUZ 12714611 ENCODE Processing Pipeline ee01273a519fafdba174279d40a65165 https://www.encodeproject.org/files/ENCFF061OCK/@@download/ENCFF061OCK.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF858BWR bigBed narrowPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF959DEV 12735672 ENCODE Processing Pipeline e9605159a89d16c85321778d02aabfdf https://www.encodeproject.org/files/ENCFF858BWR/@@download/ENCFF858BWR.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF222TUO bed narrowPeak conservative idr thresholded peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF907CUZ, ENCFF949XMC, ENCFF959DEV 460312 ENCODE Processing Pipeline 50e6b75f11e54797558636d758a58253 https://www.encodeproject.org/files/ENCFF222TUO/@@download/ENCFF222TUO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF982TPG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF085HJD 1253726 ENCODE Processing Pipeline 50c00950d9593e6d9c753b4f05675266 https://www.encodeproject.org/files/ENCFF982TPG/@@download/ENCFF982TPG.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF651BCU bigWig signal p-value ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF016HFH, ENCFF387CSW 478381809 ENCODE Processing Pipeline fb80275cccd8363b3fa780ef52f65796 https://www.encodeproject.org/files/ENCFF651BCU/@@download/ENCFF651BCU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF595TSW bigWig fold change over control ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF016HFH, ENCFF631EDC 272512174 ENCODE Processing Pipeline 7f4103069bd9b89f2033b7abd5037369 https://www.encodeproject.org/files/ENCFF595TSW/@@download/ENCFF595TSW.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF709BXS bigWig fold change over control ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF016HFH, ENCFF387CSW, ENCFF631EDC 492669759 ENCODE Processing Pipeline 901a922eb6149b12a813ea1c986220cf https://www.encodeproject.org/files/ENCFF709BXS/@@download/ENCFF709BXS.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF593MUA bigWig fold change over control ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF016HFH, ENCFF387CSW 285987010 ENCODE Processing Pipeline f412704c85ee785b984208d59de019a1 https://www.encodeproject.org/files/ENCFF593MUA/@@download/ENCFF593MUA.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF949XMC bed narrowPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF016HFH, ENCFF631EDC 5512598 ENCODE Processing Pipeline d1e399bf0a94046c9f012a32c7e0cae0 https://www.encodeproject.org/files/ENCFF949XMC/@@download/ENCFF949XMC.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF959DEV bed narrowPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF016HFH, ENCFF387CSW, ENCFF631EDC 6749412 ENCODE Processing Pipeline f4dd4fd11aa7c805642c5bce1e3411b0 https://www.encodeproject.org/files/ENCFF959DEV/@@download/ENCFF959DEV.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF243QDN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF222TUO 1134832 ENCODE Processing Pipeline 00f3775507789444e69c78dde72195cc https://www.encodeproject.org/files/ENCFF243QDN/@@download/ENCFF243QDN.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF085HJD bed narrowPeak optimal idr thresholded peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF907CUZ, ENCFF949XMC, ENCFF959DEV 532045 ENCODE Processing Pipeline e52ac73283e3d592443362106359e1ef https://www.encodeproject.org/files/ENCFF085HJD/@@download/ENCFF085HJD.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF907CUZ bed narrowPeak peaks ENCSR000BKI ChIP-seq EFO:0005718 Ishikawa immortalized cell line adult female 39 year Homo sapiens dimethyl sulfoxide POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF016HFH, ENCFF387CSW 6439872 ENCODE Processing Pipeline dd1918cd31f0c3ca6574288f7e2e17e7 https://www.encodeproject.org/files/ENCFF907CUZ/@@download/ENCFF907CUZ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF000ORS bam alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OSA 605210369 Richard Myers, HAIB 23fd3566a1b079b23fdfcfe3e3831cf4 https://www.encodeproject.org/files/ENCFF000ORS/@@download/ENCFF000ORS.bam hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ORT bigBed broadPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCC 1479064 Richard Myers, HAIB 457a48e357626c3150d8fed9d8acfdf1 https://www.encodeproject.org/files/ENCFF000ORT/@@download/ENCFF000ORT.bigBed hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ORU bigBed broadPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCE 2422094 Richard Myers, HAIB ec23540e3700932c4a50f3ec20bd2541 https://www.encodeproject.org/files/ENCFF000ORU/@@download/ENCFF000ORU.bigBed hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ORX bigWig raw signal ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 38471570 Richard Myers, HAIB d102d2e8c0a082d4b8daf016153828ef https://www.encodeproject.org/files/ENCFF000ORX/@@download/ENCFF000ORX.bigWig hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000ORY bam alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OSG 2227307179 Richard Myers, HAIB f4ae92e17c3064ce4b4dcc81d4c65524 https://www.encodeproject.org/files/ENCFF000ORY/@@download/ENCFF000ORY.bam hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000ORZ bigWig raw signal ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 121916485 Richard Myers, HAIB d7a229c64812c5f2940ff670d2669077 https://www.encodeproject.org/files/ENCFF000ORZ/@@download/ENCFF000ORZ.bigWig hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000OSA fastq reads ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 536906509 Richard Myers, HAIB 8cabfdfea396ddcbffe70e005dbd7581 https://www.encodeproject.org/files/ENCFF000OSA/@@download/ENCFF000OSA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF000OSG fastq reads ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 2992771497 Richard Myers, HAIB 10a5f05ec133779ca3f7d06ec0367d00 https://www.encodeproject.org/files/ENCFF000OSG/@@download/ENCFF000OSG.fastq.gz HiSeq 2000 /files/ENCFF000OSP/ released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF001UCC bed broadPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 993163 Richard Myers, HAIB db497a5e067741ee57b37b3ca920cf34 https://www.encodeproject.org/files/ENCFF001UCC/@@download/ENCFF001UCC.bed.gz hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001UCE bed broadPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 1376960 Richard Myers, HAIB bb3207c12a6b0ecdb720ffbe3955bb64 https://www.encodeproject.org/files/ENCFF001UCE/@@download/ENCFF001UCE.bed.gz hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF002CJG bed narrowPeak optimal idr thresholded peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1681653 ENCODE Consortium Analysis Working Group 5430340eb9fc27a77685a961af585d94 https://www.encodeproject.org/files/ENCFF002CJG/@@download/ENCFF002CJG.bed.gz hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF211NNX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE ENCFF002CJG 3397227 ENCODE Consortium 118dc712a9fea105c536a4273cb3241b https://www.encodeproject.org/files/ENCFF211NNX/@@download/ENCFF211NNX.bigBed hg19 archived low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF007KVW bam unfiltered alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OSA, ENCFF643CGH 688318231 ENCODE Processing Pipeline 63fa9af4b79730e79e7d0005af623871 https://www.encodeproject.org/files/ENCFF007KVW/@@download/ENCFF007KVW.bam GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF987DEN bam alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OSA, ENCFF643CGH 464079924 ENCODE Processing Pipeline d29dcd7ab4cf7ed709531dae5e2fc311 https://www.encodeproject.org/files/ENCFF987DEN/@@download/ENCFF987DEN.bam GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF193ZXJ bam unfiltered alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OSG, ENCFF643CGH 3384418945 ENCODE Processing Pipeline ffa95acaa0090d4bbf2b834b301c7a73 https://www.encodeproject.org/files/ENCFF193ZXJ/@@download/ENCFF193ZXJ.bam GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF219RFB bam alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OSG, ENCFF643CGH 1300599621 ENCODE Processing Pipeline f9d4f258a50ba76d9fca8e9ac49497a9 https://www.encodeproject.org/files/ENCFF219RFB/@@download/ENCFF219RFB.bam GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF944SJF bam alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OSA, ENCFF807MUK 464404189 ENCODE Processing Pipeline 04ee2be1929f9b781024dd5ae569f28e https://www.encodeproject.org/files/ENCFF944SJF/@@download/ENCFF944SJF.bam hg19 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF433GKX bam unfiltered alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OSA, ENCFF807MUK 686873452 ENCODE Processing Pipeline b6d5164484d5faa79da71c2132b2ac3b https://www.encodeproject.org/files/ENCFF433GKX/@@download/ENCFF433GKX.bam hg19 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF746RLX bam alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OSG, ENCFF807MUK 1301082160 ENCODE Processing Pipeline c0d4bb6cdc5e945ea32ea3f58e6c81a4 https://www.encodeproject.org/files/ENCFF746RLX/@@download/ENCFF746RLX.bam hg19 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF527RKH bam unfiltered alignments ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OSG, ENCFF807MUK 3376879194 ENCODE Processing Pipeline f8ac2863aa46eb102d25eed61709926c https://www.encodeproject.org/files/ENCFF527RKH/@@download/ENCFF527RKH.bam hg19 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF059COV bigWig signal p-value ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF219RFB 530861294 ENCODE Processing Pipeline 7e648f0ab7c8ed7fb92c2edd0878e0ca https://www.encodeproject.org/files/ENCFF059COV/@@download/ENCFF059COV.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF904MGK bigWig fold change over control ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF987DEN 248802482 ENCODE Processing Pipeline 2d03b45bc2a2b1e1557fa91e71594a71 https://www.encodeproject.org/files/ENCFF904MGK/@@download/ENCFF904MGK.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF719IXP bigWig signal p-value ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF987DEN 383872848 ENCODE Processing Pipeline 9f4c442779dbc44d1bdc7af62bd615a1 https://www.encodeproject.org/files/ENCFF719IXP/@@download/ENCFF719IXP.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF510RNH bigWig signal p-value ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF219RFB, ENCFF987DEN 526104011 ENCODE Processing Pipeline 4afd4fc9c4258034ce62956b268ba2a4 https://www.encodeproject.org/files/ENCFF510RNH/@@download/ENCFF510RNH.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF925MPO bigBed narrowPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF635UVJ 11656022 ENCODE Processing Pipeline 86b388c90e2e8d5d452d763ced0fd3d5 https://www.encodeproject.org/files/ENCFF925MPO/@@download/ENCFF925MPO.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF924QAP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF060IVS 1999198 ENCODE Processing Pipeline 7cabf2ddc1dbd368ff184a566c597da6 https://www.encodeproject.org/files/ENCFF924QAP/@@download/ENCFF924QAP.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF164PQM bigWig fold change over control ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF219RFB 502411445 ENCODE Processing Pipeline 587b1418fb6867e58ded750ec5c17611 https://www.encodeproject.org/files/ENCFF164PQM/@@download/ENCFF164PQM.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF635UVJ bed narrowPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF219RFB 5566291 ENCODE Processing Pipeline 5341c749f0ebe833ec6e5da95129ad5e https://www.encodeproject.org/files/ENCFF635UVJ/@@download/ENCFF635UVJ.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF987WYM bigBed narrowPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF606VTZ 11839730 ENCODE Processing Pipeline d89828964f8f4acadfa06c400d6d1365 https://www.encodeproject.org/files/ENCFF987WYM/@@download/ENCFF987WYM.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF791XXJ bigWig fold change over control ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF219RFB, ENCFF987DEN 635279405 ENCODE Processing Pipeline 51af4152ae9c8f999c6d8b1828066b09 https://www.encodeproject.org/files/ENCFF791XXJ/@@download/ENCFF791XXJ.bigWig GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF606VTZ bed narrowPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF219RFB, ENCFF987DEN 5851318 ENCODE Processing Pipeline 12b7d7f65782dcdf04d3d0984a3f47cf https://www.encodeproject.org/files/ENCFF606VTZ/@@download/ENCFF606VTZ.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF753SMK bigBed narrowPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF498COE 10798486 ENCODE Processing Pipeline fe1932223ea3b6457bee629f2ba72d59 https://www.encodeproject.org/files/ENCFF753SMK/@@download/ENCFF753SMK.bigBed GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF498COE bed narrowPeak peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF987DEN 4508470 ENCODE Processing Pipeline 91b21089b8b71e621ad77b2e99b1947a https://www.encodeproject.org/files/ENCFF498COE/@@download/ENCFF498COE.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF060IVS bed narrowPeak optimal idr thresholded peaks ENCSR000BLD ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF498COE, ENCFF606VTZ, ENCFF635UVJ 1187766 ENCODE Processing Pipeline a8c72827b71b341202ede8867c201a8b https://www.encodeproject.org/files/ENCFF060IVS/@@download/ENCFF060IVS.bed.gz GRCh38 released low read depth, inconsistent platforms, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample ENCFF570BZB fastq reads ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 1 50 single-ended 2400688921 Richard Myers, HAIB fc0eb78afe0b0a51357cd1919d78d9d6 SRA:SRR6214354 https://www.encodeproject.org/files/ENCFF570BZB/@@download/ENCFF570BZB.fastq.gz HiSeq 2000 /files/ENCFF977SGP/ released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF921ZXR fastq reads ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1581509882 Richard Myers, HAIB d4c4eaf797eafed51ad5289dbfc55727 SRA:SRR6214355 https://www.encodeproject.org/files/ENCFF921ZXR/@@download/ENCFF921ZXR.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF862SKN bam unfiltered alignments ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 50 ENCFF570BZB, ENCFF643CGH 2692146555 ENCODE Processing Pipeline 1fb6aca889d9309e2779db624a27b013 https://www.encodeproject.org/files/ENCFF862SKN/@@download/ENCFF862SKN.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF628WUT bam unfiltered alignments ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF921ZXR 1670087887 ENCODE Processing Pipeline a08befa047e0f445b521bdf4a2ee4b18 https://www.encodeproject.org/files/ENCFF628WUT/@@download/ENCFF628WUT.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF180KHA bam alignments ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 50 ENCFF570BZB, ENCFF643CGH 1909373258 ENCODE Processing Pipeline ee319981aa8ef8f876269f32aed41e23 https://www.encodeproject.org/files/ENCFF180KHA/@@download/ENCFF180KHA.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF770RPH bam alignments ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF921ZXR 1091515783 ENCODE Processing Pipeline 6cdaff2ee92d40cdad209cf294b8db2a https://www.encodeproject.org/files/ENCFF770RPH/@@download/ENCFF770RPH.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF430TQH bigWig signal p-value ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF180KHA, ENCFF200YPH, ENCFF610PNU 1048600819 ENCODE Processing Pipeline 5817357491eb61743c81cdd886a66818 https://www.encodeproject.org/files/ENCFF430TQH/@@download/ENCFF430TQH.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF494UJT bigWig fold change over control ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF770RPH 549998734 ENCODE Processing Pipeline cb00b87fb73ca3955ba8d0f51f42b643 https://www.encodeproject.org/files/ENCFF494UJT/@@download/ENCFF494UJT.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF348WSF bigWig signal p-value ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF770RPH 536022260 ENCODE Processing Pipeline 951ded3fcd78790f06f5cdd0567ea503 https://www.encodeproject.org/files/ENCFF348WSF/@@download/ENCFF348WSF.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF766QTY bigWig signal p-value ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF180KHA, ENCFF200YPH, ENCFF610PNU, ENCFF770RPH 1051133480 ENCODE Processing Pipeline fb8a469b87fba945994f63db056a8c38 https://www.encodeproject.org/files/ENCFF766QTY/@@download/ENCFF766QTY.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF932WPR bigWig fold change over control ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF180KHA, ENCFF200YPH, ENCFF610PNU, ENCFF770RPH 1317339765 ENCODE Processing Pipeline d678da5191768aa5c3b7d0a51540dbdb https://www.encodeproject.org/files/ENCFF932WPR/@@download/ENCFF932WPR.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF002XDM bigWig fold change over control ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF180KHA, ENCFF200YPH, ENCFF610PNU 973128644 ENCODE Processing Pipeline d0557105b7ec964570ccbd33235756c9 https://www.encodeproject.org/files/ENCFF002XDM/@@download/ENCFF002XDM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF698APF bed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF770RPH 5811997 ENCODE Processing Pipeline cfd28b088f12755c5afafb9ec1904b8f https://www.encodeproject.org/files/ENCFF698APF/@@download/ENCFF698APF.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF594PYS bed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF180KHA, ENCFF200YPH, ENCFF610PNU 6567365 ENCODE Processing Pipeline ff6aab92f7ebc51eb104fb525da43038 https://www.encodeproject.org/files/ENCFF594PYS/@@download/ENCFF594PYS.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF748WSU bed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF180KHA, ENCFF200YPH, ENCFF610PNU, ENCFF770RPH 6928250 ENCODE Processing Pipeline 268a62513d020edfccc1aaf6637983b2 https://www.encodeproject.org/files/ENCFF748WSU/@@download/ENCFF748WSU.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF342AEY bigBed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF594PYS 13513206 ENCODE Processing Pipeline 8de1230e23512eeb84786843a662a386 https://www.encodeproject.org/files/ENCFF342AEY/@@download/ENCFF342AEY.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF060PVW bigBed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF698APF 13451084 ENCODE Processing Pipeline 2856c94fb0003177cd2da5c77addafd0 https://www.encodeproject.org/files/ENCFF060PVW/@@download/ENCFF060PVW.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF142IVB bigBed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF748WSU 13476178 ENCODE Processing Pipeline 1491cda10821a1c73d608849c3b08712 https://www.encodeproject.org/files/ENCFF142IVB/@@download/ENCFF142IVB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF247UJX bed narrowPeak conservative idr thresholded peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF594PYS, ENCFF698APF, ENCFF748WSU 578801 ENCODE Processing Pipeline 8d1b71c3d049ec363771876926e15665 https://www.encodeproject.org/files/ENCFF247UJX/@@download/ENCFF247UJX.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF080CDZ bigBed narrowPeak optimal idr thresholded peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF178WRO 1210314 ENCODE Processing Pipeline 0b4d1b5a693ebc47ebb165b17fc56754 https://www.encodeproject.org/files/ENCFF080CDZ/@@download/ENCFF080CDZ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF460NCP bigBed narrowPeak conservative idr thresholded peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF247UJX 1117369 ENCODE Processing Pipeline 9c9715edef4b0d77223412558f756386 https://www.encodeproject.org/files/ENCFF460NCP/@@download/ENCFF460NCP.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF178WRO bed narrowPeak optimal idr thresholded peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF594PYS, ENCFF698APF, ENCFF748WSU 639601 ENCODE Processing Pipeline 695af7d99571288773222c43cd74f344 https://www.encodeproject.org/files/ENCFF178WRO/@@download/ENCFF178WRO.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF400XIQ bam alignments ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF921ZXR 1091498564 ENCODE Processing Pipeline 9acb7085fba767e97578990129c68970 https://www.encodeproject.org/files/ENCFF400XIQ/@@download/ENCFF400XIQ.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF077VRK bam unfiltered alignments ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF921ZXR 1661772541 ENCODE Processing Pipeline 69a61551d43d15b20c603977503c46a6 https://www.encodeproject.org/files/ENCFF077VRK/@@download/ENCFF077VRK.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF333RKO bam unfiltered alignments ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 50 ENCFF570BZB, ENCFF807MUK 2679004135 ENCODE Processing Pipeline c4d42f7b9e4e0b4e943fc0b046fbc20f https://www.encodeproject.org/files/ENCFF333RKO/@@download/ENCFF333RKO.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF039BUJ bam alignments ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 50 ENCFF570BZB, ENCFF807MUK 1909161854 ENCODE Processing Pipeline 5e890c143f9116edabdd878ad49d0cde https://www.encodeproject.org/files/ENCFF039BUJ/@@download/ENCFF039BUJ.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF276QMD bigBed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF783JKF 13504223 ENCODE Processing Pipeline 52e6bf923ebc89d4c5c87066b2ef47a4 https://www.encodeproject.org/files/ENCFF276QMD/@@download/ENCFF276QMD.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF733PGO bigWig signal p-value ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF039BUJ, ENCFF235CCD, ENCFF321UJV 1038811225 ENCODE Processing Pipeline 6aeb74cc5a63dd7c72645ec9ea55a784 https://www.encodeproject.org/files/ENCFF733PGO/@@download/ENCFF733PGO.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF347ECZ bigWig fold change over control ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF039BUJ, ENCFF235CCD, ENCFF321UJV, ENCFF400XIQ 1342458379 ENCODE Processing Pipeline 2d4c287bb10c9582e6db4266fa9340e9 https://www.encodeproject.org/files/ENCFF347ECZ/@@download/ENCFF347ECZ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF783JKF bed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF039BUJ, ENCFF235CCD, ENCFF321UJV 6565432 ENCODE Processing Pipeline 6aa5ae808742febf0230c56d9acb5167 https://www.encodeproject.org/files/ENCFF783JKF/@@download/ENCFF783JKF.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF185NUX bigWig signal p-value ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF400XIQ 610538529 ENCODE Processing Pipeline c002bd57a7ba38e2bf4c380b7fcafb38 https://www.encodeproject.org/files/ENCFF185NUX/@@download/ENCFF185NUX.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF807KYM bigWig fold change over control ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF400XIQ 550475475 ENCODE Processing Pipeline c34146c34cc693343c06365a221fef4b https://www.encodeproject.org/files/ENCFF807KYM/@@download/ENCFF807KYM.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF034ALK bed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF039BUJ, ENCFF235CCD, ENCFF321UJV, ENCFF400XIQ 6976604 ENCODE Processing Pipeline 001a53c986b478e23c5d10362724947b https://www.encodeproject.org/files/ENCFF034ALK/@@download/ENCFF034ALK.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF038QDT bigBed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF034ALK 13491259 ENCODE Processing Pipeline 110c04a67603f193d762aff06fbed1db https://www.encodeproject.org/files/ENCFF038QDT/@@download/ENCFF038QDT.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF085VWO bed narrowPeak conservative idr thresholded peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF034ALK, ENCFF501HAG, ENCFF783JKF 587534 ENCODE Processing Pipeline e0396d91e44d5d9660a2c2be2520de07 https://www.encodeproject.org/files/ENCFF085VWO/@@download/ENCFF085VWO.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF847ZBP bigBed narrowPeak optimal idr thresholded peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF510UBQ 1207120 ENCODE Processing Pipeline b65b96eaf97e6378f2140270bd987350 https://www.encodeproject.org/files/ENCFF847ZBP/@@download/ENCFF847ZBP.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF402CFR bigWig signal p-value ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF039BUJ, ENCFF235CCD, ENCFF321UJV, ENCFF400XIQ 1216725400 ENCODE Processing Pipeline 23a691e51ebf49ad0e7a4fd8b3380e40 https://www.encodeproject.org/files/ENCFF402CFR/@@download/ENCFF402CFR.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF500WCJ bigWig fold change over control ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1 ENCFF039BUJ, ENCFF235CCD, ENCFF321UJV 972863122 ENCODE Processing Pipeline b6118582a0aedff970b023847e0e56a7 https://www.encodeproject.org/files/ENCFF500WCJ/@@download/ENCFF500WCJ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF314GEJ bigBed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF501HAG 13451129 ENCODE Processing Pipeline c8aba3c338d8955d65dba41c8954c926 https://www.encodeproject.org/files/ENCFF314GEJ/@@download/ENCFF314GEJ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF533TWL bigBed narrowPeak conservative idr thresholded peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF085VWO 1130112 ENCODE Processing Pipeline 8bb58f6f0f3c64975aaf16b2cbea8aa9 https://www.encodeproject.org/files/ENCFF533TWL/@@download/ENCFF533TWL.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF510UBQ bed narrowPeak optimal idr thresholded peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF034ALK, ENCFF501HAG, ENCFF783JKF 638782 ENCODE Processing Pipeline 047d4008e34b135f96b20243b80c4441 https://www.encodeproject.org/files/ENCFF510UBQ/@@download/ENCFF510UBQ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF501HAG bed narrowPeak peaks ENCSR867WPH ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens REST-human ENCAB000AJK DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF400XIQ 5821870 ENCODE Processing Pipeline 1750bc311afac8615c8af3816673b3c9 https://www.encodeproject.org/files/ENCFF501HAG/@@download/ENCFF501HAG.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF215GBK fastq reads ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1493293232 Richard Myers, HAIB d2232567756c2048451152b4265b49a0 SRA:SRR5339369 https://www.encodeproject.org/files/ENCFF215GBK/@@download/ENCFF215GBK.fastq.gz HiSeq 2000 /files/ENCFF977SGP/ released antibody characterized with exemption biological replicates with identical biosample ENCFF978CPC fastq reads ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1180863799 Richard Myers, HAIB 456a301689a6ccee976b010487481eab SRA:SRR5339368 https://www.encodeproject.org/files/ENCFF978CPC/@@download/ENCFF978CPC.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption biological replicates with identical biosample ENCFF695SMU bam unfiltered alignments ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 50 ENCFF215GBK, ENCFF643CGH 1653505324 ENCODE Processing Pipeline 7116c9e626a8e9f9ba4e7ed49915e804 https://www.encodeproject.org/files/ENCFF695SMU/@@download/ENCFF695SMU.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF804TUA bam unfiltered alignments ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF978CPC 1297974956 ENCODE Processing Pipeline b5cb2dfcb0498e96197287d236b17863 https://www.encodeproject.org/files/ENCFF804TUA/@@download/ENCFF804TUA.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF641PXS bam alignments ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 50 ENCFF215GBK, ENCFF643CGH 1224715512 ENCODE Processing Pipeline 40d525eb5a980df9b6ec9ead766697e2 https://www.encodeproject.org/files/ENCFF641PXS/@@download/ENCFF641PXS.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF861AOO bam alignments ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 50 ENCFF643CGH, ENCFF978CPC 938148959 ENCODE Processing Pipeline aad6da83dac2d56ad08a6671ed161c2b https://www.encodeproject.org/files/ENCFF861AOO/@@download/ENCFF861AOO.bam GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF679FST bigWig signal p-value ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF610PNU, ENCFF641PXS 838995913 ENCODE Processing Pipeline 00f14070a2d762500168a5b4799f0612 https://www.encodeproject.org/files/ENCFF679FST/@@download/ENCFF679FST.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF938JFI bigWig signal p-value ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF861AOO 568199722 ENCODE Processing Pipeline 20f149477a261cc2d2424dcf0e91e4d0 https://www.encodeproject.org/files/ENCFF938JFI/@@download/ENCFF938JFI.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF574WZA bigWig signal p-value ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF200YPH, ENCFF610PNU, ENCFF641PXS, ENCFF861AOO 1075621365 ENCODE Processing Pipeline de3ab223a400111f954b4c8c86e8649b https://www.encodeproject.org/files/ENCFF574WZA/@@download/ENCFF574WZA.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF224WNN bigBed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF591BNO 13467909 ENCODE Processing Pipeline d75031460d9d57f819f9ec6e0947be91 https://www.encodeproject.org/files/ENCFF224WNN/@@download/ENCFF224WNN.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF329IOJ bigWig fold change over control ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF610PNU, ENCFF641PXS 887751880 ENCODE Processing Pipeline 86c1dd9379cf2fc6accbfb1a0d13d669 https://www.encodeproject.org/files/ENCFF329IOJ/@@download/ENCFF329IOJ.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF928WPG bigWig fold change over control ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF200YPH, ENCFF610PNU, ENCFF641PXS, ENCFF861AOO 1215730985 ENCODE Processing Pipeline 5ebfc3efd6e0658c9506e23c85c9db73 https://www.encodeproject.org/files/ENCFF928WPG/@@download/ENCFF928WPG.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF488NTO bed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF861AOO 5127385 ENCODE Processing Pipeline 48038210276b3166c0b53d31278481f4 https://www.encodeproject.org/files/ENCFF488NTO/@@download/ENCFF488NTO.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF678BEB bigWig fold change over control ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF610PNU, ENCFF861AOO 511095941 ENCODE Processing Pipeline e35a5d89b6327c9056cf8dfc1f6359ee https://www.encodeproject.org/files/ENCFF678BEB/@@download/ENCFF678BEB.bigWig GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF591BNO bed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF200YPH, ENCFF610PNU, ENCFF641PXS 6306677 ENCODE Processing Pipeline 6cb3299d8c171dc0610728bdc44c0f72 https://www.encodeproject.org/files/ENCFF591BNO/@@download/ENCFF591BNO.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF054GYB bed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF200YPH, ENCFF610PNU, ENCFF641PXS, ENCFF861AOO 6687352 ENCODE Processing Pipeline 472e6111c90b00487ba8324d90061459 https://www.encodeproject.org/files/ENCFF054GYB/@@download/ENCFF054GYB.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF074JOP bigBed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF488NTO 11196226 ENCODE Processing Pipeline 9911b190a67b721f0eab6a489f23aae1 https://www.encodeproject.org/files/ENCFF074JOP/@@download/ENCFF074JOP.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF172IAS bed narrowPeak conservative idr thresholded peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF054GYB, ENCFF419RSJ, ENCFF488NTO, ENCFF591BNO 580581 ENCODE Processing Pipeline a85b6b4aa427577e342410fd4e07fefc https://www.encodeproject.org/files/ENCFF172IAS/@@download/ENCFF172IAS.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF216VCA bigBed narrowPeak conservative idr thresholded peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF172IAS 1143372 ENCODE Processing Pipeline 0072f7cf3403a444336a7441b0539ba4 https://www.encodeproject.org/files/ENCFF216VCA/@@download/ENCFF216VCA.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF686GZP bigBed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF054GYB 13532168 ENCODE Processing Pipeline b15d43b89e1caee0943003a2415aaa8a https://www.encodeproject.org/files/ENCFF686GZP/@@download/ENCFF686GZP.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF981HWP bigBed narrowPeak optimal idr thresholded peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF229COM 1215765 ENCODE Processing Pipeline 98fd0c397d7bd875f365e6fbac305b5d https://www.encodeproject.org/files/ENCFF981HWP/@@download/ENCFF981HWP.bigBed GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF229COM bed narrowPeak optimal idr thresholded peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF054GYB, ENCFF419RSJ, ENCFF488NTO, ENCFF591BNO 626475 ENCODE Processing Pipeline 703e3b942d2c3355b7e351a8aa9d3e97 https://www.encodeproject.org/files/ENCFF229COM/@@download/ENCFF229COM.bed.gz GRCh38 released antibody characterized with exemption biological replicates with identical biosample ENCFF288WBH bam unfiltered alignments ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF978CPC 1291629343 ENCODE Processing Pipeline 412fc780b558b1e74aef29889e5c9394 https://www.encodeproject.org/files/ENCFF288WBH/@@download/ENCFF288WBH.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF515BLD bam alignments ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 50 ENCFF807MUK, ENCFF978CPC 938124002 ENCODE Processing Pipeline ab880777a49f7aa488583b991faf236c https://www.encodeproject.org/files/ENCFF515BLD/@@download/ENCFF515BLD.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF263ZVJ bam alignments ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 50 ENCFF215GBK, ENCFF807MUK 1224650875 ENCODE Processing Pipeline 407e3f0980a1a0078c3fab7c41773a33 https://www.encodeproject.org/files/ENCFF263ZVJ/@@download/ENCFF263ZVJ.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF225MVG bam unfiltered alignments ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 50 ENCFF215GBK, ENCFF807MUK 1644725735 ENCODE Processing Pipeline 5c064082d38bedc94155c110ec993f2b https://www.encodeproject.org/files/ENCFF225MVG/@@download/ENCFF225MVG.bam hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF275BLS bigWig signal p-value ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF263ZVJ, ENCFF321UJV 971221336 ENCODE Processing Pipeline 0c5e6996f1d8e1077a33a5231fb78835 https://www.encodeproject.org/files/ENCFF275BLS/@@download/ENCFF275BLS.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF373EUK bed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF263ZVJ, ENCFF321UJV 6321057 ENCODE Processing Pipeline b2742acb42d3e4e5a9501075875e1a85 https://www.encodeproject.org/files/ENCFF373EUK/@@download/ENCFF373EUK.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF027ZUW bigWig signal p-value ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF263ZVJ, ENCFF321UJV, ENCFF515BLD 988084287 ENCODE Processing Pipeline 0f490c82acd7aaacc305f35af6ae63bc https://www.encodeproject.org/files/ENCFF027ZUW/@@download/ENCFF027ZUW.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF436DJC bed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF515BLD 5199549 ENCODE Processing Pipeline 8f0a59206a2ac5618bb18337dfae2e7b https://www.encodeproject.org/files/ENCFF436DJC/@@download/ENCFF436DJC.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF301CFJ bed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF263ZVJ, ENCFF321UJV, ENCFF515BLD 6675053 ENCODE Processing Pipeline bf988957eb9ee5594bd0a4dca852accb https://www.encodeproject.org/files/ENCFF301CFJ/@@download/ENCFF301CFJ.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF376OQW bigBed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF301CFJ 13509782 ENCODE Processing Pipeline 3969b55815df3b776083da6dfb2967c3 https://www.encodeproject.org/files/ENCFF376OQW/@@download/ENCFF376OQW.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF449HIL bigWig signal p-value ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF515BLD 587657120 ENCODE Processing Pipeline 6f99dba52740639127cfb406634f0837 https://www.encodeproject.org/files/ENCFF449HIL/@@download/ENCFF449HIL.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF108DKL bigWig fold change over control ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF235CCD, ENCFF263ZVJ, ENCFF321UJV 902748972 ENCODE Processing Pipeline 4a30e3924f793ff36673a165bf1ce042 https://www.encodeproject.org/files/ENCFF108DKL/@@download/ENCFF108DKL.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF090FNP bigBed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1 ENCFF373EUK 13431490 ENCODE Processing Pipeline 1224b09bdd4aa531391cbc88a42cf76e https://www.encodeproject.org/files/ENCFF090FNP/@@download/ENCFF090FNP.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF948RGJ bigBed narrowPeak peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF436DJC 11197485 ENCODE Processing Pipeline fd36a07e16bd0034f896eb3c5ba28eda https://www.encodeproject.org/files/ENCFF948RGJ/@@download/ENCFF948RGJ.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF133FXT bed narrowPeak conservative idr thresholded peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF301CFJ, ENCFF373EUK, ENCFF436DJC 576124 ENCODE Processing Pipeline a294d767729247e006542b00ece7d91a https://www.encodeproject.org/files/ENCFF133FXT/@@download/ENCFF133FXT.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF413EJE bigBed narrowPeak conservative idr thresholded peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF133FXT 1135402 ENCODE Processing Pipeline bc126a0f60a42c23b71efe4afc8d8027 https://www.encodeproject.org/files/ENCFF413EJE/@@download/ENCFF413EJE.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF804UDG bed narrowPeak optimal idr thresholded peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF301CFJ, ENCFF373EUK, ENCFF436DJC 621826 ENCODE Processing Pipeline 4831345a4a86188eac653f2ee5b01725 https://www.encodeproject.org/files/ENCFF804UDG/@@download/ENCFF804UDG.bed.gz hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF039IEL bigBed narrowPeak optimal idr thresholded peaks ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF804UDG 1205263 ENCODE Processing Pipeline b448fbd339acacb7f1c091ec40ee21f8 https://www.encodeproject.org/files/ENCFF039IEL/@@download/ENCFF039IEL.bigBed hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF031TMJ bigWig fold change over control ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 2 ENCFF321UJV, ENCFF515BLD 505233917 ENCODE Processing Pipeline 86c5f22dbfb0ba8282d830e1d9fad161 https://www.encodeproject.org/files/ENCFF031TMJ/@@download/ENCFF031TMJ.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF303OKE bigWig fold change over control ENCSR837GTK ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens JUND-human ENCAB000AID DNA False 2016-06-30 ENCODE 1, 2 ENCFF235CCD, ENCFF263ZVJ, ENCFF321UJV, ENCFF515BLD 1207838945 ENCODE Processing Pipeline 5e2621bdc4397605a401580e7c9928c4 https://www.encodeproject.org/files/ENCFF303OKE/@@download/ENCFF303OKE.bigWig hg19 released antibody characterized with exemption biological replicates with identical biosample ENCFF000OSL bam alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OSU 885995435 Richard Myers, HAIB 5c711a96eb26b7443b05564634db351d https://www.encodeproject.org/files/ENCFF000OSL/@@download/ENCFF000OSL.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OSM bam alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OSX 451558748 Richard Myers, HAIB f662baa6600ce5f9d9c600635230af61 https://www.encodeproject.org/files/ENCFF000OSM/@@download/ENCFF000OSM.bam hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OSN bigBed broadPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UCD 66449 Richard Myers, HAIB e063cde57f8007c0b450cea747b35f1c https://www.encodeproject.org/files/ENCFF000OSN/@@download/ENCFF000OSN.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OSO bigBed broadPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UCF 110274 Richard Myers, HAIB cdf2ffb25827aa4d7796aa56b1b3c2e7 https://www.encodeproject.org/files/ENCFF000OSO/@@download/ENCFF000OSO.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OSQ bigWig raw signal ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 979877 Richard Myers, HAIB 1be5a8f0664a309afee42ae7c308147c https://www.encodeproject.org/files/ENCFF000OSQ/@@download/ENCFF000OSQ.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OSR bigWig raw signal ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 6274714 Richard Myers, HAIB bad8d784637c745063fd293166d7c1a4 https://www.encodeproject.org/files/ENCFF000OSR/@@download/ENCFF000OSR.bigWig hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000OSU fastq reads ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 648020753 Richard Myers, HAIB da4a8631384d6800e94489b448c8cbe0 https://www.encodeproject.org/files/ENCFF000OSU/@@download/ENCFF000OSU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000OSX fastq reads ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 512955236 Richard Myers, HAIB 75ef4b1d1255ad7a0db4376dc014f642 https://www.encodeproject.org/files/ENCFF000OSX/@@download/ENCFF000OSX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UCD bed broadPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 1 12592 Richard Myers, HAIB 52501fb397a0d0f51f7531019f8e2249 https://www.encodeproject.org/files/ENCFF001UCD/@@download/ENCFF001UCD.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UCF bed broadPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 1 43645 Richard Myers, HAIB 2aa1de653b685abb88e8c015db218501 https://www.encodeproject.org/files/ENCFF001UCF/@@download/ENCFF001UCF.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CJH bed narrowPeak optimal idr thresholded peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 26542 ENCODE Consortium Analysis Working Group 156a09ea326e6d92c3b83927c6116c75 https://www.encodeproject.org/files/ENCFF002CJH/@@download/ENCFF002CJH.bed.gz hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF993MMT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE ENCFF002CJH 93452 ENCODE Consortium f295317895593dad7f913eef8f7e47fb https://www.encodeproject.org/files/ENCFF993MMT/@@download/ENCFF993MMT.bigBed hg19 archived low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF064LNE bam unfiltered alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OSX, ENCFF643CGH 625645787 ENCODE Processing Pipeline f081a6ab0a572221b087ad783c4e0a46 https://www.encodeproject.org/files/ENCFF064LNE/@@download/ENCFF064LNE.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF361FRE bam alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OSX, ENCFF643CGH 218191852 ENCODE Processing Pipeline c3dcbb188845e1c2101b5ef2a9e876be https://www.encodeproject.org/files/ENCFF361FRE/@@download/ENCFF361FRE.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF397JLL bam unfiltered alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OSU, ENCFF643CGH 865842437 ENCODE Processing Pipeline 6012ab16e1666b20b63b8e286f9c05bd https://www.encodeproject.org/files/ENCFF397JLL/@@download/ENCFF397JLL.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF816OHX bam alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OSU, ENCFF643CGH 557367354 ENCODE Processing Pipeline d7b8e87b689e28e7285681c4145fcfb9 https://www.encodeproject.org/files/ENCFF816OHX/@@download/ENCFF816OHX.bam GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF615AON bam alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OSU, ENCFF807MUK 557775431 ENCODE Processing Pipeline 9d94828820515847804e37fbc19849f1 https://www.encodeproject.org/files/ENCFF615AON/@@download/ENCFF615AON.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF856GRT bam unfiltered alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OSU, ENCFF807MUK 862975070 ENCODE Processing Pipeline 3d733f26d60e7c55042c3983f3ad3a12 https://www.encodeproject.org/files/ENCFF856GRT/@@download/ENCFF856GRT.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF925ROB bam unfiltered alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OSX, ENCFF807MUK 624162992 ENCODE Processing Pipeline e2369572ea562d0d093eafe900982bb3 https://www.encodeproject.org/files/ENCFF925ROB/@@download/ENCFF925ROB.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF117OSG bam alignments ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OSX, ENCFF807MUK 218430404 ENCODE Processing Pipeline 8a27ee39aade9bf5b076688945e56aa7 https://www.encodeproject.org/files/ENCFF117OSG/@@download/ENCFF117OSG.bam hg19 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF801JGO bigWig signal p-value ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF361FRE, ENCFF816OHX, ENCFF948LKH 476392449 ENCODE Processing Pipeline e00a5287a4c93e6309a304482c21616f https://www.encodeproject.org/files/ENCFF801JGO/@@download/ENCFF801JGO.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF134SMY bigWig fold change over control ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF361FRE, ENCFF816OHX, ENCFF948LKH 365761527 ENCODE Processing Pipeline 622678392bcef8909dcb4dd0fa160ccf https://www.encodeproject.org/files/ENCFF134SMY/@@download/ENCFF134SMY.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF960MLI bigWig signal p-value ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF816OHX, ENCFF948LKH 352553081 ENCODE Processing Pipeline 67cdbd6cf7d1ea92085519fa3fb6240e https://www.encodeproject.org/files/ENCFF960MLI/@@download/ENCFF960MLI.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF793PJS bigWig fold change over control ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF816OHX, ENCFF948LKH 266992020 ENCODE Processing Pipeline 10251b25b637ae73a2c482cb96022190 https://www.encodeproject.org/files/ENCFF793PJS/@@download/ENCFF793PJS.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF425SFM bed narrowPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF816OHX, ENCFF948LKH 3622109 ENCODE Processing Pipeline a1b5a0b3462ffb1c722de74e16832cb9 https://www.encodeproject.org/files/ENCFF425SFM/@@download/ENCFF425SFM.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF909XXT bed narrowPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF361FRE, ENCFF948LKH 2209099 ENCODE Processing Pipeline ac2c83dea62050dff455aebc76614805 https://www.encodeproject.org/files/ENCFF909XXT/@@download/ENCFF909XXT.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF770XJR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF322AYC 91712 ENCODE Processing Pipeline 74bb1faa46d12ef3dc21fb98d786d0d2 https://www.encodeproject.org/files/ENCFF770XJR/@@download/ENCFF770XJR.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF634SQG bigWig fold change over control ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF361FRE, ENCFF948LKH 133322604 ENCODE Processing Pipeline 94f3684ec630f5572afcf5c5d5fc6e0d https://www.encodeproject.org/files/ENCFF634SQG/@@download/ENCFF634SQG.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF038IVP bed narrowPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF361FRE, ENCFF816OHX, ENCFF948LKH 4022146 ENCODE Processing Pipeline 9abd6d78526161455610025b3e5cbe86 https://www.encodeproject.org/files/ENCFF038IVP/@@download/ENCFF038IVP.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF430SIE bed narrowPeak optimal idr thresholded peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF038IVP, ENCFF419RSJ, ENCFF425SFM, ENCFF909XXT 35762 ENCODE Processing Pipeline 9f0108ecc1dd2dd7c60219069f22a2a3 https://www.encodeproject.org/files/ENCFF430SIE/@@download/ENCFF430SIE.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF629ZKN bigWig signal p-value ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF361FRE, ENCFF948LKH 311515549 ENCODE Processing Pipeline 2e1172c3a55e55fd319fd6cd46da656b https://www.encodeproject.org/files/ENCFF629ZKN/@@download/ENCFF629ZKN.bigWig GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF585XPS bigBed narrowPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF425SFM 7855356 ENCODE Processing Pipeline b2b8b2bf82dee551b8a7051bcbe0f7ed https://www.encodeproject.org/files/ENCFF585XPS/@@download/ENCFF585XPS.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF933YPD bigBed narrowPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF909XXT 4834824 ENCODE Processing Pipeline 9b1415205a6c16bc2fbcaa1aa8c61528 https://www.encodeproject.org/files/ENCFF933YPD/@@download/ENCFF933YPD.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF951YMM bigBed narrowPeak peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF038IVP 8540189 ENCODE Processing Pipeline 12a3f7773b79428cec4ee0c35faff0d6 https://www.encodeproject.org/files/ENCFF951YMM/@@download/ENCFF951YMM.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF322AYC bed narrowPeak conservative idr thresholded peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF038IVP, ENCFF419RSJ, ENCFF425SFM, ENCFF909XXT 25047 ENCODE Processing Pipeline 89edc991032726b97800b2f0d9fec09e https://www.encodeproject.org/files/ENCFF322AYC/@@download/ENCFF322AYC.bed.gz GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF736JWR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BJW ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens RXRA-human ENCAB000AKN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF430SIE 106683 ENCODE Processing Pipeline 1e8588cc412bd004f4f43f5e01598e57 https://www.encodeproject.org/files/ENCFF736JWR/@@download/ENCFF736JWR.bigBed GRCh38 released low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000NSQ bam alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NTD 798310641 Richard Myers, HAIB 14d6536cf61a080893a59b58195b0088 https://www.encodeproject.org/files/ENCFF000NSQ/@@download/ENCFF000NSQ.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NSR bigBed broadPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TWH 592417 Richard Myers, HAIB e3c7a6a983e9af6c40f899d97ad0ea12 https://www.encodeproject.org/files/ENCFF000NSR/@@download/ENCFF000NSR.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NSS bigBed broadPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TWI 642458 Richard Myers, HAIB 8f6af20793dca306c34e7b47baacfd4f https://www.encodeproject.org/files/ENCFF000NSS/@@download/ENCFF000NSS.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NST bigWig raw signal ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 1 18875729 Richard Myers, HAIB dddabb53ed22eb305e670e1f3c9b4203 https://www.encodeproject.org/files/ENCFF000NST/@@download/ENCFF000NST.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NSU bam alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NTH 1036320033 Richard Myers, HAIB 08f595f266aa5717c6b9c3799fad10ab https://www.encodeproject.org/files/ENCFF000NSU/@@download/ENCFF000NSU.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000NSV bigWig raw signal ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 1 23184417 Richard Myers, HAIB 21d22c190b57dc86138d137b2fdb1345 https://www.encodeproject.org/files/ENCFF000NSV/@@download/ENCFF000NSV.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000NTD fastq reads ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 916514718 Richard Myers, HAIB b9b3ef998932ad5d5b1fa6ea0c9043b8 https://www.encodeproject.org/files/ENCFF000NTD/@@download/ENCFF000NTD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth biological replicates with identical biosample ENCFF000NTH fastq reads ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1744280834 Richard Myers, HAIB b94fc9c3ce2176aff652256f3edd098e https://www.encodeproject.org/files/ENCFF000NTH/@@download/ENCFF000NTH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, low read depth biological replicates with identical biosample ENCFF001TWH bed broadPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 1 335357 Richard Myers, HAIB 37c8310d98d70a714fa58cd95d8b977c https://www.encodeproject.org/files/ENCFF001TWH/@@download/ENCFF001TWH.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TWI bed broadPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 1 393755 Richard Myers, HAIB 92fd2779ecf7b7233e63ecfe59d28586 https://www.encodeproject.org/files/ENCFF001TWI/@@download/ENCFF001TWI.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CGR bed narrowPeak optimal idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 348483 ENCODE Consortium Analysis Working Group 52a244b336de35419f0cd40fab2edae1 https://www.encodeproject.org/files/ENCFF002CGR/@@download/ENCFF002CGR.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF201UXH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE ENCFF002CGR 802318 ENCODE Consortium 39fa2c3d07d702aa4b92455811c0c298 https://www.encodeproject.org/files/ENCFF201UXH/@@download/ENCFF201UXH.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF272XDG bam unfiltered alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTD, ENCFF643CGH 1175272994 ENCODE Processing Pipeline 74d23f5a035ddfef73828dddc7502f62 https://www.encodeproject.org/files/ENCFF272XDG/@@download/ENCFF272XDG.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF580GMF bam alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTD, ENCFF643CGH 602501977 ENCODE Processing Pipeline 94b4053388ea077f3747ac5ca8b62eeb https://www.encodeproject.org/files/ENCFF580GMF/@@download/ENCFF580GMF.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF724BUK bam unfiltered alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTH, ENCFF643CGH 2081958734 ENCODE Processing Pipeline e9c97b52ef4a39d181c3f89b088be1c6 https://www.encodeproject.org/files/ENCFF724BUK/@@download/ENCFF724BUK.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF942EVB bam alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTH, ENCFF643CGH 659787864 ENCODE Processing Pipeline 345745904ae4ca112c8baf19fe967213 https://www.encodeproject.org/files/ENCFF942EVB/@@download/ENCFF942EVB.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF197DUH bam alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTD, ENCFF807MUK 602023696 ENCODE Processing Pipeline d0dd6cf2fb23ac07a469f78a48d255fe https://www.encodeproject.org/files/ENCFF197DUH/@@download/ENCFF197DUH.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF481NAE bam unfiltered alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NTD, ENCFF807MUK 1171825458 ENCODE Processing Pipeline d4a6c28ae9f699894173cacaae282486 https://www.encodeproject.org/files/ENCFF481NAE/@@download/ENCFF481NAE.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF264DVB bam unfiltered alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTH, ENCFF807MUK 2074883303 ENCODE Processing Pipeline e6f64c30c39e50c7d5062b5ec57ed535 https://www.encodeproject.org/files/ENCFF264DVB/@@download/ENCFF264DVB.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF671MIT bam alignments ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NTH, ENCFF807MUK 653477560 ENCODE Processing Pipeline 269bab4ee54ad9d3479c0b3d763640b3 https://www.encodeproject.org/files/ENCFF671MIT/@@download/ENCFF671MIT.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF259YEO bigWig signal p-value ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF580GMF 451602544 ENCODE Processing Pipeline 3b420512124039be983869c261873117 https://www.encodeproject.org/files/ENCFF259YEO/@@download/ENCFF259YEO.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF189FMI bigWig signal p-value ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF942EVB 408148080 ENCODE Processing Pipeline 745b72aefb2023900b870e93b343f5ee https://www.encodeproject.org/files/ENCFF189FMI/@@download/ENCFF189FMI.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF477CIW bed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF580GMF, ENCFF942EVB 5676608 ENCODE Processing Pipeline a91e86375410e2cf92fb9e8992e1e8c0 https://www.encodeproject.org/files/ENCFF477CIW/@@download/ENCFF477CIW.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF698MPT bigWig signal p-value ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF580GMF, ENCFF942EVB 784304258 ENCODE Processing Pipeline aca7e50c0b2ebf4db366dd147881b062 https://www.encodeproject.org/files/ENCFF698MPT/@@download/ENCFF698MPT.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF531WVY bigWig fold change over control ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF580GMF 272400610 ENCODE Processing Pipeline 8f47b4b78b9862978aa8503c81526dac https://www.encodeproject.org/files/ENCFF531WVY/@@download/ENCFF531WVY.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF898IWR bigWig fold change over control ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF438FFV, ENCFF562HPN, ENCFF580GMF, ENCFF942EVB 622052740 ENCODE Processing Pipeline 35a7b6655d8601bfc941cd3598f6f183 https://www.encodeproject.org/files/ENCFF898IWR/@@download/ENCFF898IWR.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF387RPM bed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF942EVB 4558380 ENCODE Processing Pipeline 5a65843678ca994a33aeb8ec78b8a45c https://www.encodeproject.org/files/ENCFF387RPM/@@download/ENCFF387RPM.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF242YZT bigBed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF387RPM 10528558 ENCODE Processing Pipeline ff8d0894c6afd70110a612047b2a5548 https://www.encodeproject.org/files/ENCFF242YZT/@@download/ENCFF242YZT.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF582ENM bigBed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF477CIW 11274116 ENCODE Processing Pipeline 065579ea712626634eff1a6e36bfe9bc https://www.encodeproject.org/files/ENCFF582ENM/@@download/ENCFF582ENM.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF383HAY bed narrowPeak optimal idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF387RPM, ENCFF419RSJ, ENCFF422WOY, ENCFF477CIW 328184 ENCODE Processing Pipeline c5947f54d87171e46178f9074dfe3a23 https://www.encodeproject.org/files/ENCFF383HAY/@@download/ENCFF383HAY.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF885IAM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF383HAY 624319 ENCODE Processing Pipeline 4a55db64b31272c0da2bf7feab60cd5c https://www.encodeproject.org/files/ENCFF885IAM/@@download/ENCFF885IAM.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF330IWH bigWig fold change over control ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438FFV, ENCFF942EVB 275005443 ENCODE Processing Pipeline 438ca0332e8a7a1818dbee39ad7bf600 https://www.encodeproject.org/files/ENCFF330IWH/@@download/ENCFF330IWH.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF739LNZ bigBed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF422WOY 10591326 ENCODE Processing Pipeline 4664fd30f04a29e9ab990de25bc6ff61 https://www.encodeproject.org/files/ENCFF739LNZ/@@download/ENCFF739LNZ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF800HNH bed narrowPeak conservative idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF387RPM, ENCFF419RSJ, ENCFF422WOY, ENCFF477CIW 269469 ENCODE Processing Pipeline dd0026780d77710d5d385765ea0da957 https://www.encodeproject.org/files/ENCFF800HNH/@@download/ENCFF800HNH.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF422WOY bed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF580GMF 4506731 ENCODE Processing Pipeline dfcbaee834de0215d635b6817c9ea54d https://www.encodeproject.org/files/ENCFF422WOY/@@download/ENCFF422WOY.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF425CMP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF800HNH 541580 ENCODE Processing Pipeline d44311431813cbe6cc3655e0d8170c0f https://www.encodeproject.org/files/ENCFF425CMP/@@download/ENCFF425CMP.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF474WLQ bigWig signal p-value ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF197DUH, ENCFF958RTR 480537953 ENCODE Processing Pipeline 584503fdacd8a923f1e032b91af6521b https://www.encodeproject.org/files/ENCFF474WLQ/@@download/ENCFF474WLQ.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF153DRT bigWig signal p-value ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF671MIT, ENCFF837IOW 408212598 ENCODE Processing Pipeline 5fe3d9b14e0d68d6f8a7dfa230a0f88b https://www.encodeproject.org/files/ENCFF153DRT/@@download/ENCFF153DRT.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF805DGI bigWig fold change over control ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF197DUH, ENCFF958RTR 273215822 ENCODE Processing Pipeline 1bc89594f13a0f6c011bdadb59a546f6 https://www.encodeproject.org/files/ENCFF805DGI/@@download/ENCFF805DGI.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF777JWC bigWig signal p-value ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF197DUH, ENCFF671MIT, ENCFF837IOW, ENCFF958RTR 934078028 ENCODE Processing Pipeline 5d10c6da8dc477218594e95a80c78edb https://www.encodeproject.org/files/ENCFF777JWC/@@download/ENCFF777JWC.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF495MTX bigWig fold change over control ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF671MIT, ENCFF837IOW 274629450 ENCODE Processing Pipeline 61fad61894c350b97895ccf041fc8103 https://www.encodeproject.org/files/ENCFF495MTX/@@download/ENCFF495MTX.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF822XUX bigBed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF046PLS 10679652 ENCODE Processing Pipeline 4af08eb3bb0aa9ff8e2a8e29d8c5ee1c https://www.encodeproject.org/files/ENCFF822XUX/@@download/ENCFF822XUX.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF409EVE bigBed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF289FQM 10636739 ENCODE Processing Pipeline f016e6eba255be4100a258ea81eb6cb1 https://www.encodeproject.org/files/ENCFF409EVE/@@download/ENCFF409EVE.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF667QBX bigBed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF080MVF 11365028 ENCODE Processing Pipeline a5f1b771fb481a6d6b671a52c2e462eb https://www.encodeproject.org/files/ENCFF667QBX/@@download/ENCFF667QBX.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF049DFX bigWig fold change over control ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF197DUH, ENCFF671MIT, ENCFF837IOW, ENCFF958RTR 647577344 ENCODE Processing Pipeline 2e174e6ffcdec803eb133c5bb3ea431b https://www.encodeproject.org/files/ENCFF049DFX/@@download/ENCFF049DFX.bigWig hg19 released low read length, low read depth biological replicates with identical biosample ENCFF080MVF bed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF197DUH, ENCFF671MIT, ENCFF837IOW, ENCFF958RTR 5751017 ENCODE Processing Pipeline 97971d74f93cbb224e9ceeada695cfb3 https://www.encodeproject.org/files/ENCFF080MVF/@@download/ENCFF080MVF.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF046PLS bed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF197DUH, ENCFF958RTR 4572072 ENCODE Processing Pipeline a49f776dcecfc81d1074693be4a16e5e https://www.encodeproject.org/files/ENCFF046PLS/@@download/ENCFF046PLS.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF289FQM bed narrowPeak peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF671MIT, ENCFF837IOW 4637535 ENCODE Processing Pipeline adf6c66b00665025515bad11517e18ef https://www.encodeproject.org/files/ENCFF289FQM/@@download/ENCFF289FQM.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF220QMP bed narrowPeak conservative idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF046PLS, ENCFF080MVF, ENCFF289FQM 276903 ENCODE Processing Pipeline b25a27c2324b76b9f5e1fa777f7be77d https://www.encodeproject.org/files/ENCFF220QMP/@@download/ENCFF220QMP.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF441FOB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF220QMP 553783 ENCODE Processing Pipeline 33dffaa392b6ca1c693456ea2812355e https://www.encodeproject.org/files/ENCFF441FOB/@@download/ENCFF441FOB.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF143BUR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF468MFY 654468 ENCODE Processing Pipeline 998f12cc78ae685341e96bfce7ab19e0 https://www.encodeproject.org/files/ENCFF143BUR/@@download/ENCFF143BUR.bigBed hg19 released low read length, low read depth biological replicates with identical biosample ENCFF468MFY bed narrowPeak optimal idr thresholded peaks ENCSR000BHA ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF046PLS, ENCFF080MVF, ENCFF289FQM 345367 ENCODE Processing Pipeline 7f180aca1612b6d01a7e549b1e685303 https://www.encodeproject.org/files/ENCFF468MFY/@@download/ENCFF468MFY.bed.gz hg19 released low read length, low read depth biological replicates with identical biosample ENCFF000QSE bam alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QSK 253630319 Richard Myers, HAIB 8d60a78d753451403863f6fc67fbdcf1 https://www.encodeproject.org/files/ENCFF000QSE/@@download/ENCFF000QSE.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QSF bam alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QSR 337035906 Richard Myers, HAIB 554c5cdd02c916eb1bddeddead105bd1 https://www.encodeproject.org/files/ENCFF000QSF/@@download/ENCFF000QSF.bam hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QSG bigBed broadPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UOB 71980 Richard Myers, HAIB dd2adf100db8ecea8ae4b7986d569282 https://www.encodeproject.org/files/ENCFF000QSG/@@download/ENCFF000QSG.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QSH bigBed broadPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UOC 288798 Richard Myers, HAIB 36478798e148d1ba3deb9aef8349f311 https://www.encodeproject.org/files/ENCFF000QSH/@@download/ENCFF000QSH.bigBed hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QSJ bigWig raw signal ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 1598592 Richard Myers, HAIB 7b7fe0a06989ac92d7c9232323aef379 https://www.encodeproject.org/files/ENCFF000QSJ/@@download/ENCFF000QSJ.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QSK fastq reads ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 273909547 Richard Myers, HAIB a5a209588ce4e4796a5c36b247e26239 https://www.encodeproject.org/files/ENCFF000QSK/@@download/ENCFF000QSK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QTR/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QSL bigWig raw signal ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 6355375 Richard Myers, HAIB ec1635dc0f20fd1d24347f19cecf5610 https://www.encodeproject.org/files/ENCFF000QSL/@@download/ENCFF000QSL.bigWig hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QSR fastq reads ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 360195967 Richard Myers, HAIB a8b49b59d2c144bb484fbe5fcc382de4 https://www.encodeproject.org/files/ENCFF000QSR/@@download/ENCFF000QSR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QTR/ released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UOB bed broadPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 19358 Richard Myers, HAIB 83d6730cbc1b1e59dfddcea0e56c1e69 https://www.encodeproject.org/files/ENCFF001UOB/@@download/ENCFF001UOB.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UOC bed broadPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 171708 Richard Myers, HAIB b8ceb912b4788c4e8b2020571a1180ac https://www.encodeproject.org/files/ENCFF001UOC/@@download/ENCFF001UOC.bed.gz hg19 archived low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF752OUG bam unfiltered alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QSK, ENCFF643CGH 326565141 ENCODE Processing Pipeline dceaafb8fcb531262d9f9248251ab136 https://www.encodeproject.org/files/ENCFF752OUG/@@download/ENCFF752OUG.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF469ACE bam alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QSK, ENCFF643CGH 133691322 ENCODE Processing Pipeline a10c3aa3039896c4afd1bad64f33049a https://www.encodeproject.org/files/ENCFF469ACE/@@download/ENCFF469ACE.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF834NZK bam unfiltered alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QSR, ENCFF643CGH 435510323 ENCODE Processing Pipeline 6a1c18edf053c03fff4e5369103c0af0 https://www.encodeproject.org/files/ENCFF834NZK/@@download/ENCFF834NZK.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF210CTW bam alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QSR, ENCFF643CGH 211951714 ENCODE Processing Pipeline 6e8b1259c74bc399f6f0477b522a3517 https://www.encodeproject.org/files/ENCFF210CTW/@@download/ENCFF210CTW.bam GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF383MWH bam alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QSK, ENCFF807MUK 133762473 ENCODE Processing Pipeline 7dfb67ca8f287bc93d8b77a4a6f30aea https://www.encodeproject.org/files/ENCFF383MWH/@@download/ENCFF383MWH.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF121KDV bam unfiltered alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QSK, ENCFF807MUK 325867100 ENCODE Processing Pipeline bcd98ce705beb3f6d80f1aef511f50d6 https://www.encodeproject.org/files/ENCFF121KDV/@@download/ENCFF121KDV.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF524OMV bam alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QSR, ENCFF807MUK 212001746 ENCODE Processing Pipeline 9f5b223e40119ee69354d09dc9f48929 https://www.encodeproject.org/files/ENCFF524OMV/@@download/ENCFF524OMV.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF521FZY bam unfiltered alignments ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QSR, ENCFF807MUK 435019613 ENCODE Processing Pipeline 4e1a9e36a94e49bbd32db3f9177c548a https://www.encodeproject.org/files/ENCFF521FZY/@@download/ENCFF521FZY.bam hg19 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF471OQX bigWig fold change over control ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF210CTW, ENCFF287VDN 154111019 ENCODE Processing Pipeline a9f598418b4a139f21cf1f7eb2a6041a https://www.encodeproject.org/files/ENCFF471OQX/@@download/ENCFF471OQX.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF105BRD bed narrowPeak optimal idr thresholded peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF333GXE, ENCFF339QXZ, ENCFF419RSJ, ENCFF645XXL 61535 ENCODE Processing Pipeline 185c4e522911b1b2cb1da4dd412e0abf https://www.encodeproject.org/files/ENCFF105BRD/@@download/ENCFF105BRD.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF729PAX bigWig signal p-value ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF210CTW, ENCFF287VDN, ENCFF469ACE 494228852 ENCODE Processing Pipeline 6dc3b7ab4ae1912396491911d5176be8 https://www.encodeproject.org/files/ENCFF729PAX/@@download/ENCFF729PAX.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF940WVW bigWig signal p-value ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF287VDN, ENCFF469ACE 494440023 ENCODE Processing Pipeline 96c51748699bd936d7e69aee25939f8a https://www.encodeproject.org/files/ENCFF940WVW/@@download/ENCFF940WVW.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF827WPZ bigWig fold change over control ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF287VDN, ENCFF469ACE 85861686 ENCODE Processing Pipeline e4839cb860cd6a0456d83be1aaca668c https://www.encodeproject.org/files/ENCFF827WPZ/@@download/ENCFF827WPZ.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF807HHG bigWig signal p-value ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF210CTW, ENCFF287VDN 426798741 ENCODE Processing Pipeline f67d65baea77032623d50e5ea9725765 https://www.encodeproject.org/files/ENCFF807HHG/@@download/ENCFF807HHG.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF134YSL bigWig fold change over control ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF210CTW, ENCFF287VDN, ENCFF469ACE 228365179 ENCODE Processing Pipeline b3a02aa0d64e9f6f3c911bc807ece603 https://www.encodeproject.org/files/ENCFF134YSL/@@download/ENCFF134YSL.bigWig GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF645XXL bed narrowPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF287VDN, ENCFF469ACE 599259 ENCODE Processing Pipeline bd771721106a061d441c4e142b77210c https://www.encodeproject.org/files/ENCFF645XXL/@@download/ENCFF645XXL.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF339QXZ bed narrowPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF210CTW, ENCFF287VDN 2605517 ENCODE Processing Pipeline c0c9d8b84765cb10dc27b1f48b39f44d https://www.encodeproject.org/files/ENCFF339QXZ/@@download/ENCFF339QXZ.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF333GXE bed narrowPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF210CTW, ENCFF287VDN, ENCFF469ACE 3999701 ENCODE Processing Pipeline b19901564304720170262604c44ae663 https://www.encodeproject.org/files/ENCFF333GXE/@@download/ENCFF333GXE.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF929MOZ bigBed narrowPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF645XXL 1062398 ENCODE Processing Pipeline 7338c7823852ca668914c0a468b6691f https://www.encodeproject.org/files/ENCFF929MOZ/@@download/ENCFF929MOZ.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF027JFK bigBed narrowPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF339QXZ 6001260 ENCODE Processing Pipeline 00c906dd1385751682939fb0eac280f5 https://www.encodeproject.org/files/ENCFF027JFK/@@download/ENCFF027JFK.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF813QLP bigBed narrowPeak peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF333GXE 9271650 ENCODE Processing Pipeline 4b8efc2797703d76264fc9c15570f45d https://www.encodeproject.org/files/ENCFF813QLP/@@download/ENCFF813QLP.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF963WFF bed narrowPeak conservative idr thresholded peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF333GXE, ENCFF339QXZ, ENCFF419RSJ, ENCFF645XXL 23209 ENCODE Processing Pipeline 4796facb7482e605c857247c57eee4d2 https://www.encodeproject.org/files/ENCFF963WFF/@@download/ENCFF963WFF.bed.gz GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF314YAJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF963WFF 83723 ENCODE Processing Pipeline 37fdd5b161efcbe626b4c170f9f7ec8e https://www.encodeproject.org/files/ENCFF314YAJ/@@download/ENCFF314YAJ.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF826EJN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPK ChIP-seq EFO:0002713 Panc1 immortalized cell line unknown male 56 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF105BRD 168688 ENCODE Processing Pipeline 3d57f137c9587e1d8fea2c970d5af914 https://www.encodeproject.org/files/ENCFF826EJN/@@download/ENCFF826EJN.bigBed GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF258VLM fastq reads ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF836VHY 1912767543 Richard Myers, HAIB ae7e9e0b9805e47917a371066794e2e3 SRA:SRR6212836 https://www.encodeproject.org/files/ENCFF258VLM/@@download/ENCFF258VLM.fastq.gz HiSeq 2000 /files/ENCFF465LHG/ released antibody characterized with exemption ENCFF836VHY fastq reads ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF258VLM 1996304832 Richard Myers, HAIB ac94c90a2e0b1405246412597486dac3 SRA:SRR6212836 https://www.encodeproject.org/files/ENCFF836VHY/@@download/ENCFF836VHY.fastq.gz HiSeq 2000 /files/ENCFF631QEA/ released antibody characterized with exemption ENCFF970XTZ bam unfiltered alignments ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF258VLM, ENCFF807MUK, ENCFF836VHY 4728763298 ENCODE Processing Pipeline 47977a7b1ae89e80602dbd6256d21ddd https://www.encodeproject.org/files/ENCFF970XTZ/@@download/ENCFF970XTZ.bam hg19 released antibody characterized with exemption ENCFF972MFX bam unfiltered alignments ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF258VLM, ENCFF643CGH, ENCFF836VHY 4751020591 ENCODE Processing Pipeline 6f4bf103386224d5702648f92e36d97d https://www.encodeproject.org/files/ENCFF972MFX/@@download/ENCFF972MFX.bam GRCh38 released antibody characterized with exemption ENCFF723ZTU bam alignments ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF258VLM, ENCFF807MUK, ENCFF836VHY 3216889576 ENCODE Processing Pipeline 44a4acad7b5f137df99cd03773efba85 https://www.encodeproject.org/files/ENCFF723ZTU/@@download/ENCFF723ZTU.bam hg19 released antibody characterized with exemption ENCFF369OGH bam alignments ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF258VLM, ENCFF643CGH, ENCFF836VHY 3220434073 ENCODE Processing Pipeline 3501de9ccaaceda0f9e5b4ea1026e879 https://www.encodeproject.org/files/ENCFF369OGH/@@download/ENCFF369OGH.bam GRCh38 released antibody characterized with exemption ENCFF614KES bigWig fold change over control ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF369OGH 1188373283 ENCODE Processing Pipeline efab9112d9c87418fa784ee3e905d8f1 https://www.encodeproject.org/files/ENCFF614KES/@@download/ENCFF614KES.bigWig GRCh38 released antibody characterized with exemption ENCFF098TMR bed narrowPeak peaks ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF369OGH 5114875 ENCODE Processing Pipeline a1faaafcdb7004dbd528d61358835d6b https://www.encodeproject.org/files/ENCFF098TMR/@@download/ENCFF098TMR.bed.gz GRCh38 released antibody characterized with exemption ENCFF308SPC bigWig signal p-value ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF369OGH 1443151853 ENCODE Processing Pipeline 8d88e0efa457badf218bb12d784751db https://www.encodeproject.org/files/ENCFF308SPC/@@download/ENCFF308SPC.bigWig GRCh38 released antibody characterized with exemption ENCFF286TEY bigBed narrowPeak peaks ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF098TMR 11939820 ENCODE Processing Pipeline febc635a458a0e820bdc85e12306f83d https://www.encodeproject.org/files/ENCFF286TEY/@@download/ENCFF286TEY.bigBed GRCh38 released antibody characterized with exemption ENCFF191VCL bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF098TMR, ENCFF419RSJ 714 ENCODE Processing Pipeline e187113ce7f293238dae93378bd4d938 https://www.encodeproject.org/files/ENCFF191VCL/@@download/ENCFF191VCL.bed.gz GRCh38 released antibody characterized with exemption ENCFF722LSW bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF191VCL 49192 ENCODE Processing Pipeline d237d2349d77bdfa0eab6d6c5965bffc https://www.encodeproject.org/files/ENCFF722LSW/@@download/ENCFF722LSW.bigBed GRCh38 released antibody characterized with exemption ENCFF027CLO bigWig fold change over control ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF723ZTU 1198108839 ENCODE Processing Pipeline c17aea3256533405fb597b8d459b587c https://www.encodeproject.org/files/ENCFF027CLO/@@download/ENCFF027CLO.bigWig hg19 released antibody characterized with exemption ENCFF839HSY bigWig signal p-value ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF723ZTU 1282052834 ENCODE Processing Pipeline 4622fa948b76de7cebcfd33b8597c383 https://www.encodeproject.org/files/ENCFF839HSY/@@download/ENCFF839HSY.bigWig hg19 released antibody characterized with exemption ENCFF434WMQ bigBed narrowPeak peaks ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF965ZSK 11883957 ENCODE Processing Pipeline 4a29db91cf190b6c04b6d0fc1a22480d https://www.encodeproject.org/files/ENCFF434WMQ/@@download/ENCFF434WMQ.bigBed hg19 released antibody characterized with exemption ENCFF965ZSK bed narrowPeak peaks ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF723ZTU 5086733 ENCODE Processing Pipeline 2c6ed487927383df49e0eafced44efb0 https://www.encodeproject.org/files/ENCFF965ZSK/@@download/ENCFF965ZSK.bed.gz hg19 released antibody characterized with exemption ENCFF105KMS bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF570FPH 16166 ENCODE Processing Pipeline ee52a837211177015a5a6f8793263b25 https://www.encodeproject.org/files/ENCFF105KMS/@@download/ENCFF105KMS.bigBed hg19 released antibody characterized with exemption ENCFF570FPH bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR147VKD ChIP-seq UBERON:0002190 subcutaneous adipose tissue tissue adult female 53 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF965ZSK 834 ENCODE Processing Pipeline 28abb996397817cb76fa72e7a3becaae https://www.encodeproject.org/files/ENCFF570FPH/@@download/ENCFF570FPH.bed.gz hg19 released antibody characterized with exemption ENCFF000QFM bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QFY 1104731999 Richard Myers, HAIB 1b02f6f4302d2d466ca2747abc203625 https://www.encodeproject.org/files/ENCFF000QFM/@@download/ENCFF000QFM.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000QFN bigBed broadPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKZ 125019 Richard Myers, HAIB e924b8a2de2ecce4335a7f5906e6d203 https://www.encodeproject.org/files/ENCFF000QFN/@@download/ENCFF000QFN.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000QFO bigBed broadPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULA 377061 Richard Myers, HAIB d3003871ef08d54da2af62e02f91b0ff https://www.encodeproject.org/files/ENCFF000QFO/@@download/ENCFF000QFO.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000QFP bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QGA 1389342272 Richard Myers, HAIB 69bd7e663fc080eab0918eefd926cb92 https://www.encodeproject.org/files/ENCFF000QFP/@@download/ENCFF000QFP.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000QFQ bigWig raw signal ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 16013780 Richard Myers, HAIB e5e803450632812fda3a7257ade0070f https://www.encodeproject.org/files/ENCFF000QFQ/@@download/ENCFF000QFQ.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000QFR bigWig raw signal ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 31940480 Richard Myers, HAIB ac6c43f9136a41b238d4d6bf487edd15 https://www.encodeproject.org/files/ENCFF000QFR/@@download/ENCFF000QFR.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000QFY fastq reads ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1020121151 Richard Myers, HAIB a097769d3b4cf57bdd13e0001d0bd107 https://www.encodeproject.org/files/ENCFF000QFY/@@download/ENCFF000QFY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF000QGA fastq reads ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1334965584 Richard Myers, HAIB 9e18df3f57739452f007b4427357a2e1 https://www.encodeproject.org/files/ENCFF000QGA/@@download/ENCFF000QGA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF001UKZ bed broadPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 41434 Richard Myers, HAIB 3370f7be2274c325532db967868d8f3d https://www.encodeproject.org/files/ENCFF001UKZ/@@download/ENCFF001UKZ.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF001ULA bed broadPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 211027 Richard Myers, HAIB f5e879a43aabcb257b8553eed167e53a https://www.encodeproject.org/files/ENCFF001ULA/@@download/ENCFF001ULA.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF002CML bed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 289014 ENCODE Consortium Analysis Working Group bda8755d57b4e4a73c98bd34c38c2fe1 https://www.encodeproject.org/files/ENCFF002CML/@@download/ENCFF002CML.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF141QDT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE ENCFF002CML 715121 ENCODE Consortium c836d6d36f60ebc89400eced6979a54f https://www.encodeproject.org/files/ENCFF141QDT/@@download/ENCFF141QDT.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF329LWM bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QFY, ENCFF643CGH 682820508 ENCODE Processing Pipeline 92f019effc0dde5f35af91880b0df07a https://www.encodeproject.org/files/ENCFF329LWM/@@download/ENCFF329LWM.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF669DGA bam unfiltered alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QFY, ENCFF643CGH 1313492897 ENCODE Processing Pipeline 6aac345a8400ea0f6e28c52fd0f52532 https://www.encodeproject.org/files/ENCFF669DGA/@@download/ENCFF669DGA.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF466NDO bam unfiltered alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGA, ENCFF643CGH 1696529585 ENCODE Processing Pipeline 2ad11d045fc61c2ba8aecb7f5b0819c0 https://www.encodeproject.org/files/ENCFF466NDO/@@download/ENCFF466NDO.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF334QAB bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGA, ENCFF643CGH 883001618 ENCODE Processing Pipeline 1f65ed54747371e6c05b24bdfe31b8ce https://www.encodeproject.org/files/ENCFF334QAB/@@download/ENCFF334QAB.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF205GHW bam unfiltered alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QFY, ENCFF807MUK 1308334504 ENCODE Processing Pipeline 0867a364871de94c1e6b54f7e5fe4ef7 https://www.encodeproject.org/files/ENCFF205GHW/@@download/ENCFF205GHW.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF154ZWB bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QFY, ENCFF807MUK 683210409 ENCODE Processing Pipeline 05350367f4c464957b7b82f236fb87c8 https://www.encodeproject.org/files/ENCFF154ZWB/@@download/ENCFF154ZWB.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF125VLH bam unfiltered alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGA, ENCFF807MUK 1691121889 ENCODE Processing Pipeline 5bdd7fbc9afa63a18ea6e703a0c4f8fd https://www.encodeproject.org/files/ENCFF125VLH/@@download/ENCFF125VLH.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF696ANF bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGA, ENCFF807MUK 883557406 ENCODE Processing Pipeline 24250ac6c243fb14a61fb296bafc051d https://www.encodeproject.org/files/ENCFF696ANF/@@download/ENCFF696ANF.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF315OMI bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF329LWM, ENCFF772PJM 214954553 ENCODE Processing Pipeline bacd841501d5ff6f04d36b7cbb8a11d3 https://www.encodeproject.org/files/ENCFF315OMI/@@download/ENCFF315OMI.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF665IPD bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF329LWM, ENCFF334QAB, ENCFF772PJM 182538061 ENCODE Processing Pipeline fcbc63750bd2ccd3a13a4b47deea7b97 https://www.encodeproject.org/files/ENCFF665IPD/@@download/ENCFF665IPD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF175ESY bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334QAB, ENCFF772PJM 309837765 ENCODE Processing Pipeline 06a7917fb60d2c46bbe2d153951eea9a https://www.encodeproject.org/files/ENCFF175ESY/@@download/ENCFF175ESY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF876MPC bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF329LWM, ENCFF334QAB, ENCFF772PJM 507313232 ENCODE Processing Pipeline e27837e31b6377fd14b6be7cac8640c0 https://www.encodeproject.org/files/ENCFF876MPC/@@download/ENCFF876MPC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF566ABE bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334QAB, ENCFF772PJM 192662146 ENCODE Processing Pipeline e9b694cc18aa320a77b1dbd8baf797fc https://www.encodeproject.org/files/ENCFF566ABE/@@download/ENCFF566ABE.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF397MIK bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF329LWM, ENCFF772PJM 255098544 ENCODE Processing Pipeline 2fb256e06c1e112c73778eea1bbcb0ce https://www.encodeproject.org/files/ENCFF397MIK/@@download/ENCFF397MIK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF472UBP bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF628XGA 291649 ENCODE Processing Pipeline b1e80c18d4b9a0afdbde0d7695aea2d9 https://www.encodeproject.org/files/ENCFF472UBP/@@download/ENCFF472UBP.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF643PFS bed narrowPeak conservative idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF628XGA, ENCFF740XTI, ENCFF966MTK 12457 ENCODE Processing Pipeline 8d04c895e8b5b66b9d80aae8eea917f7 https://www.encodeproject.org/files/ENCFF643PFS/@@download/ENCFF643PFS.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF740XTI bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334QAB, ENCFF772PJM 4403214 ENCODE Processing Pipeline 74fbc7e9392c031558a90301479c9a20 https://www.encodeproject.org/files/ENCFF740XTI/@@download/ENCFF740XTI.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF628XGA bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF329LWM, ENCFF772PJM 89962 ENCODE Processing Pipeline e355484f1860478019b7368c7c5c6d76 https://www.encodeproject.org/files/ENCFF628XGA/@@download/ENCFF628XGA.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF941WGF bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF740XTI 10205700 ENCODE Processing Pipeline b1b06e36507075e27a40f79f77cb1a32 https://www.encodeproject.org/files/ENCFF941WGF/@@download/ENCFF941WGF.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF407VGB bed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF628XGA, ENCFF740XTI, ENCFF966MTK 35624 ENCODE Processing Pipeline 65f6f45f8f01ff27847c8d1f175cddb6 https://www.encodeproject.org/files/ENCFF407VGB/@@download/ENCFF407VGB.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF966MTK bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF329LWM, ENCFF334QAB, ENCFF772PJM 4833456 ENCODE Processing Pipeline daa8283138c35cb43f1d943295216391 https://www.encodeproject.org/files/ENCFF966MTK/@@download/ENCFF966MTK.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF088UIB bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF966MTK 10868402 ENCODE Processing Pipeline 1468a495cbe6194298810bdc04924e7f https://www.encodeproject.org/files/ENCFF088UIB/@@download/ENCFF088UIB.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF569YSW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF643PFS 64276 ENCODE Processing Pipeline 5b8ec5882127f862ad4de3b9ba733dc9 https://www.encodeproject.org/files/ENCFF569YSW/@@download/ENCFF569YSW.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF518BUB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF407VGB 113786 ENCODE Processing Pipeline 6d699ff8bdf203c127987f46819cf878 https://www.encodeproject.org/files/ENCFF518BUB/@@download/ENCFF518BUB.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample control low read depth, insufficient replicate concordance ENCFF247HTV fastq reads ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1983536862 Richard Myers, HAIB 4e0a33097f77ce3fbd0612c8cd7c1404 SRA:SRR5331198 https://www.encodeproject.org/files/ENCFF247HTV/@@download/ENCFF247HTV.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF714SGI fastq reads ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1978680822 Richard Myers, HAIB 87d194f1a4b83cc4c84edf54e42148ab SRA:SRR5331197 https://www.encodeproject.org/files/ENCFF714SGI/@@download/ENCFF714SGI.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF573YRY bam unfiltered alignments ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF714SGI 2182199866 ENCODE Processing Pipeline 94ef84cec3b6d797907890a69e1ec19e https://www.encodeproject.org/files/ENCFF573YRY/@@download/ENCFF573YRY.bam GRCh38 released antibody characterized with exemption ENCFF411DVO bam unfiltered alignments ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF247HTV, ENCFF643CGH 2199922288 ENCODE Processing Pipeline ea8756be5dae1b77f2348d1a7c0da258 https://www.encodeproject.org/files/ENCFF411DVO/@@download/ENCFF411DVO.bam GRCh38 released antibody characterized with exemption ENCFF897UYW bam unfiltered alignments ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF247HTV, ENCFF807MUK 2195659086 ENCODE Processing Pipeline bfaa79e7798c2d1df06b4b898b2c32c6 https://www.encodeproject.org/files/ENCFF897UYW/@@download/ENCFF897UYW.bam hg19 released antibody characterized with exemption ENCFF031TCU bam unfiltered alignments ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF714SGI, ENCFF807MUK 2177414725 ENCODE Processing Pipeline bf646e05d84e7bb51c92c655785b9b32 https://www.encodeproject.org/files/ENCFF031TCU/@@download/ENCFF031TCU.bam hg19 released antibody characterized with exemption ENCFF436OMA bam alignments ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF247HTV, ENCFF643CGH 1684344808 ENCODE Processing Pipeline ca9e29e564fc5bffbbe355fc1bc08f8a https://www.encodeproject.org/files/ENCFF436OMA/@@download/ENCFF436OMA.bam GRCh38 released antibody characterized with exemption ENCFF921NVQ bam alignments ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF714SGI, ENCFF807MUK 1651157280 ENCODE Processing Pipeline 75c8aa077b0a0482a9b2b0846c3dca5a https://www.encodeproject.org/files/ENCFF921NVQ/@@download/ENCFF921NVQ.bam hg19 released antibody characterized with exemption ENCFF887RJC bam alignments ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF247HTV, ENCFF807MUK 1683641791 ENCODE Processing Pipeline 64efb6079c9f14372ba6c4aa9221dfa8 https://www.encodeproject.org/files/ENCFF887RJC/@@download/ENCFF887RJC.bam hg19 released antibody characterized with exemption ENCFF123DYP bam alignments ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF714SGI 1652015010 ENCODE Processing Pipeline c46c03a40ce71142800814c2b861b8c9 https://www.encodeproject.org/files/ENCFF123DYP/@@download/ENCFF123DYP.bam GRCh38 released antibody characterized with exemption ENCFF687STK bigWig signal p-value ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF123DYP 612036904 ENCODE Processing Pipeline cafc478784146cb2ca491dba77deed0b https://www.encodeproject.org/files/ENCFF687STK/@@download/ENCFF687STK.bigWig GRCh38 released antibody characterized with exemption ENCFF711RUF bigWig signal p-value ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF123DYP, ENCFF436OMA 616992193 ENCODE Processing Pipeline a45bfcf885219b4fe8db24582d969ed6 https://www.encodeproject.org/files/ENCFF711RUF/@@download/ENCFF711RUF.bigWig GRCh38 released antibody characterized with exemption ENCFF048RFA bigWig signal p-value ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF436OMA 618108329 ENCODE Processing Pipeline f074455e76b4ab8a6fc26356cc8c00bd https://www.encodeproject.org/files/ENCFF048RFA/@@download/ENCFF048RFA.bigWig GRCh38 released antibody characterized with exemption ENCFF194KOM bigWig fold change over control ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF123DYP 596374093 ENCODE Processing Pipeline ccd7e875ab6218f8a67b1b0741064ee4 https://www.encodeproject.org/files/ENCFF194KOM/@@download/ENCFF194KOM.bigWig GRCh38 released antibody characterized with exemption ENCFF068JNP bigWig fold change over control ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF436OMA 603583662 ENCODE Processing Pipeline 25643da636a99c2a64708333dcb65c17 https://www.encodeproject.org/files/ENCFF068JNP/@@download/ENCFF068JNP.bigWig GRCh38 released antibody characterized with exemption ENCFF583TMU bigWig fold change over control ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF123DYP, ENCFF436OMA 1001912021 ENCODE Processing Pipeline 1f62940d8de2aa32ab1f21ff43ea6db6 https://www.encodeproject.org/files/ENCFF583TMU/@@download/ENCFF583TMU.bigWig GRCh38 released antibody characterized with exemption ENCFF153DTK bed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF436OMA 6803705 ENCODE Processing Pipeline 5fa08b0a3956ff9fc9c5f9dcb0e79831 https://www.encodeproject.org/files/ENCFF153DTK/@@download/ENCFF153DTK.bed.gz GRCh38 released antibody characterized with exemption ENCFF473XPU bed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF123DYP, ENCFF436OMA 7130793 ENCODE Processing Pipeline 1cb7304ee7521f6d7a0748329f39c42f https://www.encodeproject.org/files/ENCFF473XPU/@@download/ENCFF473XPU.bed.gz GRCh38 released antibody characterized with exemption ENCFF828CEN bed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF123DYP 6670595 ENCODE Processing Pipeline 704595581b919bcd9b16f3733c0192a5 https://www.encodeproject.org/files/ENCFF828CEN/@@download/ENCFF828CEN.bed.gz GRCh38 released antibody characterized with exemption ENCFF301NSH bigBed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF828CEN 12885683 ENCODE Processing Pipeline edca4715682c9a208ca1b72e13df4735 https://www.encodeproject.org/files/ENCFF301NSH/@@download/ENCFF301NSH.bigBed GRCh38 released antibody characterized with exemption ENCFF155QEZ bigBed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF153DTK 12894736 ENCODE Processing Pipeline 20b4318bc0445036304ac252cc70e697 https://www.encodeproject.org/files/ENCFF155QEZ/@@download/ENCFF155QEZ.bigBed GRCh38 released antibody characterized with exemption ENCFF048GOO bigBed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF473XPU 12815324 ENCODE Processing Pipeline cba6b2809d05cbc6feb275f5f1c2418e https://www.encodeproject.org/files/ENCFF048GOO/@@download/ENCFF048GOO.bigBed GRCh38 released antibody characterized with exemption ENCFF935AGY bed narrowPeak conservative idr thresholded peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF153DTK, ENCFF419RSJ, ENCFF473XPU, ENCFF828CEN 387814 ENCODE Processing Pipeline 758055fe9b608d7bcd83bebbb6c45c05 https://www.encodeproject.org/files/ENCFF935AGY/@@download/ENCFF935AGY.bed.gz GRCh38 released antibody characterized with exemption ENCFF262LJF bigBed narrowPeak conservative idr thresholded peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF935AGY 943014 ENCODE Processing Pipeline b7fcf4ba8f37c97c47de7558136e480b https://www.encodeproject.org/files/ENCFF262LJF/@@download/ENCFF262LJF.bigBed GRCh38 released antibody characterized with exemption ENCFF253EID bed narrowPeak optimal idr thresholded peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF153DTK, ENCFF419RSJ, ENCFF473XPU, ENCFF828CEN 396719 ENCODE Processing Pipeline 87c87b5606d428ac90fb8bc857ea095d https://www.encodeproject.org/files/ENCFF253EID/@@download/ENCFF253EID.bed.gz GRCh38 released antibody characterized with exemption ENCFF047QYI bigBed narrowPeak optimal idr thresholded peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF253EID 959957 ENCODE Processing Pipeline 79608e2628acaa8f14f563a00ef5ccec https://www.encodeproject.org/files/ENCFF047QYI/@@download/ENCFF047QYI.bigBed GRCh38 released antibody characterized with exemption ENCFF098ESM bigWig signal p-value ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF887RJC 1282001245 ENCODE Processing Pipeline 843ebeb3f14995854dcd45022ee90237 https://www.encodeproject.org/files/ENCFF098ESM/@@download/ENCFF098ESM.bigWig hg19 released antibody characterized with exemption ENCFF664DJS bigWig signal p-value ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF921NVQ 1285251304 ENCODE Processing Pipeline 41216ff784d3fdfa3e7e5668d9e9a1df https://www.encodeproject.org/files/ENCFF664DJS/@@download/ENCFF664DJS.bigWig hg19 released antibody characterized with exemption ENCFF627WQV bigWig signal p-value ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF887RJC, ENCFF921NVQ 1352685296 ENCODE Processing Pipeline ac81df9eb442f3c2816fa4d55ceba14f https://www.encodeproject.org/files/ENCFF627WQV/@@download/ENCFF627WQV.bigWig hg19 released antibody characterized with exemption ENCFF264LBZ bigWig fold change over control ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF887RJC 1122965920 ENCODE Processing Pipeline 2c09b3a644d141fe4695183a4c48a8db https://www.encodeproject.org/files/ENCFF264LBZ/@@download/ENCFF264LBZ.bigWig hg19 released antibody characterized with exemption ENCFF945FFH bigWig fold change over control ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF921NVQ 1049737171 ENCODE Processing Pipeline 0a5a52568f221a89213a52363b83bcb2 https://www.encodeproject.org/files/ENCFF945FFH/@@download/ENCFF945FFH.bigWig hg19 released antibody characterized with exemption ENCFF230IJN bigWig fold change over control ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF887RJC, ENCFF921NVQ 1604326042 ENCODE Processing Pipeline f04e927bd1ebe669937446b5b5b87e16 https://www.encodeproject.org/files/ENCFF230IJN/@@download/ENCFF230IJN.bigWig hg19 released antibody characterized with exemption ENCFF308KAE bed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF887RJC 7037785 ENCODE Processing Pipeline 1391340be3595584a1cc0a711cc1de92 https://www.encodeproject.org/files/ENCFF308KAE/@@download/ENCFF308KAE.bed.gz hg19 released antibody characterized with exemption ENCFF317CAE bigBed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF308KAE 12824903 ENCODE Processing Pipeline 4a5af85d7588e5c7df77d67aa9f25550 https://www.encodeproject.org/files/ENCFF317CAE/@@download/ENCFF317CAE.bigBed hg19 released antibody characterized with exemption ENCFF199FRO bed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF921NVQ 7002376 ENCODE Processing Pipeline c421f1d8f4006fbfe7882fc68e83cda1 https://www.encodeproject.org/files/ENCFF199FRO/@@download/ENCFF199FRO.bed.gz hg19 released antibody characterized with exemption ENCFF425QMN bed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF887RJC, ENCFF921NVQ 7225767 ENCODE Processing Pipeline 6161dc6dc75c5c9d3542e29415cf30b1 https://www.encodeproject.org/files/ENCFF425QMN/@@download/ENCFF425QMN.bed.gz hg19 released antibody characterized with exemption ENCFF147QXH bigBed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF199FRO 12868835 ENCODE Processing Pipeline 38c9e09dbe1237e4b4216424949a42e3 https://www.encodeproject.org/files/ENCFF147QXH/@@download/ENCFF147QXH.bigBed hg19 released antibody characterized with exemption ENCFF912EJX bigBed narrowPeak peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF425QMN 12774391 ENCODE Processing Pipeline 6ce6f14b8867a189087c2a8178c876bf https://www.encodeproject.org/files/ENCFF912EJX/@@download/ENCFF912EJX.bigBed hg19 released antibody characterized with exemption ENCFF724AFB bed narrowPeak conservative idr thresholded peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF199FRO, ENCFF308KAE, ENCFF425QMN 380476 ENCODE Processing Pipeline b50d790f0fbe25837fe9720e766a8481 https://www.encodeproject.org/files/ENCFF724AFB/@@download/ENCFF724AFB.bed.gz hg19 released antibody characterized with exemption ENCFF611SBI bigBed narrowPeak conservative idr thresholded peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF724AFB 790135 ENCODE Processing Pipeline 0a983a0550c88a1cb031c084d20cd170 https://www.encodeproject.org/files/ENCFF611SBI/@@download/ENCFF611SBI.bigBed hg19 released antibody characterized with exemption ENCFF969GKJ bed narrowPeak optimal idr thresholded peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF199FRO, ENCFF308KAE, ENCFF425QMN 393609 ENCODE Processing Pipeline 07957e2fa3917e92ccaff4d4305055f4 https://www.encodeproject.org/files/ENCFF969GKJ/@@download/ENCFF969GKJ.bed.gz hg19 released antibody characterized with exemption ENCFF572XNT bigBed narrowPeak optimal idr thresholded peaks ENCSR071YVR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KMT2B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF969GKJ 810962 ENCODE Processing Pipeline b3f36d00b048675b8f93409e2ca7abee https://www.encodeproject.org/files/ENCFF572XNT/@@download/ENCFF572XNT.bigBed hg19 released antibody characterized with exemption ENCFF517FOY fastq reads ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 1708377481 Richard Myers, HAIB 8d8cfb2cdf967131b259cf84056e16ed SRA:SRR5338551 https://www.encodeproject.org/files/ENCFF517FOY/@@download/ENCFF517FOY.fastq.gz HiSeq 2000 /files/ENCFF662ZML/ released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF951QJT fastq reads ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1419621765 Richard Myers, HAIB 93e11a01cdb1e9f4fda4712f2bdca940 SRA:SRR5338552 https://www.encodeproject.org/files/ENCFF951QJT/@@download/ENCFF951QJT.fastq.gz HiSeq 2000 /files/ENCFF662ZML/ released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF447GXR bam alignments ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF807MUK, ENCFF951QJT 1124379905 ENCODE Processing Pipeline 4ce16986c12b9e820480a6482cee6b5c https://www.encodeproject.org/files/ENCFF447GXR/@@download/ENCFF447GXR.bam hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF453OTB bam alignments ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF517FOY, ENCFF807MUK 1382675458 ENCODE Processing Pipeline ef55c47fd0f5b9a31eafc5275ecdf585 https://www.encodeproject.org/files/ENCFF453OTB/@@download/ENCFF453OTB.bam hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF272DEJ bigWig signal p-value ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF106GMN, ENCFF447GXR 425570010 ENCODE Processing Pipeline b2363e47a780e4b606b5040a38a59639 https://www.encodeproject.org/files/ENCFF272DEJ/@@download/ENCFF272DEJ.bigWig hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF935BPG bigWig signal p-value ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF106GMN, ENCFF453OTB 436418243 ENCODE Processing Pipeline b2d570936846a0c6e412ed343ef6dbb5 https://www.encodeproject.org/files/ENCFF935BPG/@@download/ENCFF935BPG.bigWig hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF536CSS bigWig signal p-value ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF106GMN, ENCFF447GXR, ENCFF453OTB 426005306 ENCODE Processing Pipeline 8a86fdd5cbae8681614ddc492e3b06e0 https://www.encodeproject.org/files/ENCFF536CSS/@@download/ENCFF536CSS.bigWig hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF207BPT bigWig fold change over control ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF106GMN, ENCFF453OTB 595888722 ENCODE Processing Pipeline 1f0f7130f78e5650790583ee4e42e851 https://www.encodeproject.org/files/ENCFF207BPT/@@download/ENCFF207BPT.bigWig hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF607UAB bigWig fold change over control ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF106GMN, ENCFF447GXR 516962003 ENCODE Processing Pipeline 013426194811c50a1ab3e8d7ff9df82c https://www.encodeproject.org/files/ENCFF607UAB/@@download/ENCFF607UAB.bigWig hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF680TBL bed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF106GMN, ENCFF453OTB 6263158 ENCODE Processing Pipeline 7a2f2b55d64a26d88a41a20d56e24a23 https://www.encodeproject.org/files/ENCFF680TBL/@@download/ENCFF680TBL.bed.gz hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF664TLP bigWig fold change over control ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF106GMN, ENCFF447GXR, ENCFF453OTB 893199334 ENCODE Processing Pipeline 1aefea032782722a20c9a74ddaf4d32e https://www.encodeproject.org/files/ENCFF664TLP/@@download/ENCFF664TLP.bigWig hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF628ATN bed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF106GMN, ENCFF447GXR 6500122 ENCODE Processing Pipeline c030a9fddb8205541b2c73d382c99b35 https://www.encodeproject.org/files/ENCFF628ATN/@@download/ENCFF628ATN.bed.gz hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF269RLS bed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF106GMN, ENCFF447GXR, ENCFF453OTB 6925591 ENCODE Processing Pipeline 38d954454fba2800a9d89335e867471a https://www.encodeproject.org/files/ENCFF269RLS/@@download/ENCFF269RLS.bed.gz hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF510HMT bigBed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF680TBL 13227130 ENCODE Processing Pipeline d4bd4a2e89fbf3ba6e7788561d8aca99 https://www.encodeproject.org/files/ENCFF510HMT/@@download/ENCFF510HMT.bigBed hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF854ZRJ bigBed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF628ATN 12928709 ENCODE Processing Pipeline 323cccd63a4d850da6e0d97c6fc9f6de https://www.encodeproject.org/files/ENCFF854ZRJ/@@download/ENCFF854ZRJ.bigBed hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF126FRN bigBed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF269RLS 13006679 ENCODE Processing Pipeline 6b5511145c1b75fce8ed546292c77f64 https://www.encodeproject.org/files/ENCFF126FRN/@@download/ENCFF126FRN.bigBed hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF639VNB bed narrowPeak conservative idr thresholded peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF269RLS, ENCFF628ATN, ENCFF680TBL 446959 ENCODE Processing Pipeline a22f5855cbbc46a2d81d39525fe1ab7b https://www.encodeproject.org/files/ENCFF639VNB/@@download/ENCFF639VNB.bed.gz hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF874EVS bed narrowPeak optimal idr thresholded peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF269RLS, ENCFF628ATN, ENCFF680TBL 477282 ENCODE Processing Pipeline be71f391e60994a025c0662242be27ff https://www.encodeproject.org/files/ENCFF874EVS/@@download/ENCFF874EVS.bed.gz hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF507QFU bigBed narrowPeak conservative idr thresholded peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF639VNB 1011394 ENCODE Processing Pipeline e865ddfbecceff3931d22a1346ffec8a https://www.encodeproject.org/files/ENCFF507QFU/@@download/ENCFF507QFU.bigBed hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF801CZC bigBed narrowPeak optimal idr thresholded peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF874EVS 1070543 ENCODE Processing Pipeline 11bd45ec93d68b9acc46c25ced3085b9 https://www.encodeproject.org/files/ENCFF801CZC/@@download/ENCFF801CZC.bigBed hg19 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF635CNZ bam unfiltered alignments ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF951QJT 1518163060 ENCODE Processing Pipeline 75f4e054c40463253f1e2778f9c264af https://www.encodeproject.org/files/ENCFF635CNZ/@@download/ENCFF635CNZ.bam GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF357IEY bam unfiltered alignments ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF517FOY, ENCFF643CGH 1830526549 ENCODE Processing Pipeline ae2dde6728bdd14d7d70964a214c73be https://www.encodeproject.org/files/ENCFF357IEY/@@download/ENCFF357IEY.bam GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF777VSR bam alignments ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF951QJT 1124336501 ENCODE Processing Pipeline b7956a84263b8d6fb18a05c360846a1e https://www.encodeproject.org/files/ENCFF777VSR/@@download/ENCFF777VSR.bam GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF212FUJ bam alignments ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF517FOY, ENCFF643CGH 1382711163 ENCODE Processing Pipeline 8b00d25d574359872f44689f37e73ca0 https://www.encodeproject.org/files/ENCFF212FUJ/@@download/ENCFF212FUJ.bam GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF657MNX bigWig signal p-value ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF400VEC, ENCFF777VSR 426767811 ENCODE Processing Pipeline 2ba9f365370d5bf91a11c758cd5455c0 https://www.encodeproject.org/files/ENCFF657MNX/@@download/ENCFF657MNX.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF396AHR bigWig signal p-value ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF212FUJ, ENCFF400VEC 435669442 ENCODE Processing Pipeline b8eae4bd23a481ef1a47528424c5a8ca https://www.encodeproject.org/files/ENCFF396AHR/@@download/ENCFF396AHR.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF342TJK bigWig signal p-value ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF212FUJ, ENCFF400VEC, ENCFF777VSR 425802706 ENCODE Processing Pipeline 1e82162bea66104884c39483ba9fd4f5 https://www.encodeproject.org/files/ENCFF342TJK/@@download/ENCFF342TJK.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF112WSU bigWig fold change over control ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF400VEC, ENCFF777VSR 520224439 ENCODE Processing Pipeline 78f04140e7fc02a7f458642f7d11bc9b https://www.encodeproject.org/files/ENCFF112WSU/@@download/ENCFF112WSU.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF024NKG bigWig fold change over control ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF212FUJ, ENCFF400VEC 592641968 ENCODE Processing Pipeline d26da1d8c04e15b8a798033bcbb5e1cf https://www.encodeproject.org/files/ENCFF024NKG/@@download/ENCFF024NKG.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF571MPI bed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF400VEC, ENCFF777VSR 6282086 ENCODE Processing Pipeline 2dbf56ef7a04673f7c341e1e6963d172 https://www.encodeproject.org/files/ENCFF571MPI/@@download/ENCFF571MPI.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF618PGT bigWig fold change over control ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF212FUJ, ENCFF400VEC, ENCFF777VSR 897613792 ENCODE Processing Pipeline 742a5b5a537a7885c08a2d297ddc0892 https://www.encodeproject.org/files/ENCFF618PGT/@@download/ENCFF618PGT.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF117JAR bigBed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF571MPI 12917744 ENCODE Processing Pipeline d9abe9e027c0992f38626af4546b4c59 https://www.encodeproject.org/files/ENCFF117JAR/@@download/ENCFF117JAR.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF742EMB bed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF212FUJ, ENCFF400VEC, ENCFF777VSR 6788785 ENCODE Processing Pipeline 6a7c1052f236b3a059a9018de3820f66 https://www.encodeproject.org/files/ENCFF742EMB/@@download/ENCFF742EMB.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF943CQI bigBed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF742EMB 13006846 ENCODE Processing Pipeline 869470751bebea69e9e5e35cd33488e8 https://www.encodeproject.org/files/ENCFF943CQI/@@download/ENCFF943CQI.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF460HFK bigBed narrowPeak optimal idr thresholded peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF571FVN 1077981 ENCODE Processing Pipeline aa40bfaf37ab1797d7c935fe947de4bf https://www.encodeproject.org/files/ENCFF460HFK/@@download/ENCFF460HFK.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF904MXP bed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF212FUJ, ENCFF400VEC 6037465 ENCODE Processing Pipeline 8bc5d9eed95ff29bd65519f3ba31bb66 https://www.encodeproject.org/files/ENCFF904MXP/@@download/ENCFF904MXP.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF637GUJ bigBed narrowPeak conservative idr thresholded peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF721SZO 1012537 ENCODE Processing Pipeline d5e231d62a374efbcf0066fdca5961b2 https://www.encodeproject.org/files/ENCFF637GUJ/@@download/ENCFF637GUJ.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF231EBL bigBed narrowPeak peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF904MXP 13198899 ENCODE Processing Pipeline c9d4cb1b2353610331136190cbb615e8 https://www.encodeproject.org/files/ENCFF231EBL/@@download/ENCFF231EBL.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF721SZO bed narrowPeak conservative idr thresholded peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF571MPI, ENCFF742EMB, ENCFF904MXP 447184 ENCODE Processing Pipeline 6f2c22be0d6de81f373334ab401ce258 https://www.encodeproject.org/files/ENCFF721SZO/@@download/ENCFF721SZO.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF571FVN bed narrowPeak optimal idr thresholded peaks ENCSR331ORD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CREB1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF571MPI, ENCFF742EMB, ENCFF904MXP 480653 ENCODE Processing Pipeline f0299c5d851cd4599b4cec90cbd1fe6c https://www.encodeproject.org/files/ENCFF571FVN/@@download/ENCFF571FVN.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing mapped reads lengths, missing unfiltered alignments ENCFF892EKB fastq reads ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2047838978 Richard Myers, HAIB d13648b97003ed1b870bf432c40a7cd7 SRA:SRR5339230 https://www.encodeproject.org/files/ENCFF892EKB/@@download/ENCFF892EKB.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF336VLV fastq reads ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1864042712 Richard Myers, HAIB 0e631eb2571f22ef6c48972c27ae46e8 SRA:SRR5339229 https://www.encodeproject.org/files/ENCFF336VLV/@@download/ENCFF336VLV.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF015OQD bam unfiltered alignments ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF336VLV, ENCFF807MUK 2158810065 ENCODE Processing Pipeline 169a8c0ef053310ed20d6c473d230a25 https://www.encodeproject.org/files/ENCFF015OQD/@@download/ENCFF015OQD.bam hg19 released antibody characterized with exemption ENCFF740PUZ bam alignments ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF892EKB 1842143132 ENCODE Processing Pipeline 3a3d05726102ce212242ca2141fa27a0 https://www.encodeproject.org/files/ENCFF740PUZ/@@download/ENCFF740PUZ.bam hg19 released antibody characterized with exemption ENCFF684ORD bam unfiltered alignments ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF892EKB 2426753451 ENCODE Processing Pipeline cb26c365ca65deea7604e801ad1547d2 https://www.encodeproject.org/files/ENCFF684ORD/@@download/ENCFF684ORD.bam hg19 released antibody characterized with exemption ENCFF223CHE bam alignments ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF336VLV, ENCFF807MUK 1519151208 ENCODE Processing Pipeline 94a1f77e21a0c3df5e1e01b1d62a72f9 https://www.encodeproject.org/files/ENCFF223CHE/@@download/ENCFF223CHE.bam hg19 released antibody characterized with exemption ENCFF699CPF bam alignments ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF336VLV, ENCFF643CGH 1519668787 ENCODE Processing Pipeline 1122fa21af682d3d664174f607e844bc https://www.encodeproject.org/files/ENCFF699CPF/@@download/ENCFF699CPF.bam GRCh38 released antibody characterized with exemption ENCFF175WMD bam unfiltered alignments ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF336VLV, ENCFF643CGH 2162589060 ENCODE Processing Pipeline 06b5341f2ec8ec52d13a895a5dc50de5 https://www.encodeproject.org/files/ENCFF175WMD/@@download/ENCFF175WMD.bam GRCh38 released antibody characterized with exemption ENCFF818NIT bam alignments ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF892EKB 1843366764 ENCODE Processing Pipeline 4fddc6864052f5c99b70aded87c42b6b https://www.encodeproject.org/files/ENCFF818NIT/@@download/ENCFF818NIT.bam GRCh38 released antibody characterized with exemption ENCFF608KUT bam unfiltered alignments ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF892EKB 2432922183 ENCODE Processing Pipeline a1678f498f02f5be656b758b1a7ae18a https://www.encodeproject.org/files/ENCFF608KUT/@@download/ENCFF608KUT.bam GRCh38 released antibody characterized with exemption ENCFF194KRZ bigWig signal p-value ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF699CPF 646957001 ENCODE Processing Pipeline ca134ab310dcfad5462c54a5045d5069 https://www.encodeproject.org/files/ENCFF194KRZ/@@download/ENCFF194KRZ.bigWig GRCh38 released antibody characterized with exemption ENCFF895LJK bigWig signal p-value ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF818NIT 657951334 ENCODE Processing Pipeline e2a0c9a8b0937bf5a388a068d3436106 https://www.encodeproject.org/files/ENCFF895LJK/@@download/ENCFF895LJK.bigWig GRCh38 released antibody characterized with exemption ENCFF521DTB bigWig signal p-value ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF699CPF, ENCFF818NIT 672729597 ENCODE Processing Pipeline 3f8da55b6c57fcf8811184594a7bc62a https://www.encodeproject.org/files/ENCFF521DTB/@@download/ENCFF521DTB.bigWig GRCh38 released antibody characterized with exemption ENCFF043IOF bigWig fold change over control ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF818NIT 628860161 ENCODE Processing Pipeline e86dab963d7d54d57fb372132255a909 https://www.encodeproject.org/files/ENCFF043IOF/@@download/ENCFF043IOF.bigWig GRCh38 released antibody characterized with exemption ENCFF413SCF bigWig fold change over control ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF699CPF 487121865 ENCODE Processing Pipeline a2298f7b5a281bc2025ae872eb4b7bc6 https://www.encodeproject.org/files/ENCFF413SCF/@@download/ENCFF413SCF.bigWig GRCh38 released antibody characterized with exemption ENCFF139BWF bed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF699CPF, ENCFF818NIT 6635798 ENCODE Processing Pipeline 0b110687bfd5e44992b93c06f9f26a5c https://www.encodeproject.org/files/ENCFF139BWF/@@download/ENCFF139BWF.bed.gz GRCh38 released antibody characterized with exemption ENCFF183ETK bigWig fold change over control ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF699CPF, ENCFF818NIT 928945011 ENCODE Processing Pipeline 7faf3b641d871549be2c1101f7c7a510 https://www.encodeproject.org/files/ENCFF183ETK/@@download/ENCFF183ETK.bigWig GRCh38 released antibody characterized with exemption ENCFF051WMI bigBed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF139BWF 13183724 ENCODE Processing Pipeline 13428235129c2e15522df73e58838f18 https://www.encodeproject.org/files/ENCFF051WMI/@@download/ENCFF051WMI.bigBed GRCh38 released antibody characterized with exemption ENCFF553GVE bigBed narrowPeak conservative idr thresholded peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF235PWV 1364480 ENCODE Processing Pipeline 7b3306d462421e28012ceef0d63ed641 https://www.encodeproject.org/files/ENCFF553GVE/@@download/ENCFF553GVE.bigBed GRCh38 released antibody characterized with exemption ENCFF149BUU bigBed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF291UHF 13222700 ENCODE Processing Pipeline f6f8310bfea571739f0ae66d9a28509e https://www.encodeproject.org/files/ENCFF149BUU/@@download/ENCFF149BUU.bigBed GRCh38 released antibody characterized with exemption ENCFF517EJH bed narrowPeak optimal idr thresholded peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF139BWF, ENCFF291UHF, ENCFF419RSJ, ENCFF649ZDR 830044 ENCODE Processing Pipeline 6582d0e6479a5ac7899cfd624f12e3a8 https://www.encodeproject.org/files/ENCFF517EJH/@@download/ENCFF517EJH.bed.gz GRCh38 released antibody characterized with exemption ENCFF291UHF bed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF818NIT 6202149 ENCODE Processing Pipeline 2fcf2c5477e93e4e238e46978ee05dcc https://www.encodeproject.org/files/ENCFF291UHF/@@download/ENCFF291UHF.bed.gz GRCh38 released antibody characterized with exemption ENCFF235PWV bed narrowPeak conservative idr thresholded peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF139BWF, ENCFF291UHF, ENCFF419RSJ, ENCFF649ZDR 688037 ENCODE Processing Pipeline 4fbc95a3f8f4784172dd638ce575930b https://www.encodeproject.org/files/ENCFF235PWV/@@download/ENCFF235PWV.bed.gz GRCh38 released antibody characterized with exemption ENCFF649ZDR bed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF699CPF 5981263 ENCODE Processing Pipeline 7021119e6f6db89a9b09c5305ff848e8 https://www.encodeproject.org/files/ENCFF649ZDR/@@download/ENCFF649ZDR.bed.gz GRCh38 released antibody characterized with exemption ENCFF499QAG bigBed narrowPeak optimal idr thresholded peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF517EJH 1573642 ENCODE Processing Pipeline 4a364a28594a97061edffe76deaf29d0 https://www.encodeproject.org/files/ENCFF499QAG/@@download/ENCFF499QAG.bigBed GRCh38 released antibody characterized with exemption ENCFF562RCA bigBed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF649ZDR 13070633 ENCODE Processing Pipeline e01e1bb78fd84b846eac4cf863fc3b9c https://www.encodeproject.org/files/ENCFF562RCA/@@download/ENCFF562RCA.bigBed GRCh38 released antibody characterized with exemption ENCFF909JXM bigWig signal p-value ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF740PUZ 1309158181 ENCODE Processing Pipeline f5c03b54d05f684bb170047965f8f281 https://www.encodeproject.org/files/ENCFF909JXM/@@download/ENCFF909JXM.bigWig hg19 released antibody characterized with exemption ENCFF421OKB bigWig signal p-value ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF223CHE 1158198140 ENCODE Processing Pipeline 6a32ed56a5c5d9c5ca5762ffb7bac52a https://www.encodeproject.org/files/ENCFF421OKB/@@download/ENCFF421OKB.bigWig hg19 released antibody characterized with exemption ENCFF670FOZ bigWig signal p-value ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF223CHE, ENCFF740PUZ 1371757997 ENCODE Processing Pipeline 4d7a69df5deb249702eaa1c6c2bfba02 https://www.encodeproject.org/files/ENCFF670FOZ/@@download/ENCFF670FOZ.bigWig hg19 released antibody characterized with exemption ENCFF659ZRV bigWig fold change over control ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF740PUZ 1159438633 ENCODE Processing Pipeline 080295de83719f2ef3d5be49328bcdf4 https://www.encodeproject.org/files/ENCFF659ZRV/@@download/ENCFF659ZRV.bigWig hg19 released antibody characterized with exemption ENCFF665MPX bigWig fold change over control ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF223CHE 895392822 ENCODE Processing Pipeline 5f258cec669b9a89b8febe19602af3f2 https://www.encodeproject.org/files/ENCFF665MPX/@@download/ENCFF665MPX.bigWig hg19 released antibody characterized with exemption ENCFF157FBN bigWig fold change over control ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF223CHE, ENCFF740PUZ 1494838092 ENCODE Processing Pipeline 0e64f0a1f245f7232779c98f79a6d533 https://www.encodeproject.org/files/ENCFF157FBN/@@download/ENCFF157FBN.bigWig hg19 released antibody characterized with exemption ENCFF614RLB bed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF740PUZ 6618173 ENCODE Processing Pipeline 2c3c0ebf72779da50c6af58f47dee890 https://www.encodeproject.org/files/ENCFF614RLB/@@download/ENCFF614RLB.bed.gz hg19 released antibody characterized with exemption ENCFF521SLC bed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF223CHE 6469898 ENCODE Processing Pipeline 1d1d352dddf503d50316e7ee49e9ee95 https://www.encodeproject.org/files/ENCFF521SLC/@@download/ENCFF521SLC.bed.gz hg19 released antibody characterized with exemption ENCFF424PAM bed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF223CHE, ENCFF740PUZ 6901572 ENCODE Processing Pipeline a30f96d1638dfb4a6883aef23b32b60c https://www.encodeproject.org/files/ENCFF424PAM/@@download/ENCFF424PAM.bed.gz hg19 released antibody characterized with exemption ENCFF771KDO bigBed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF614RLB 13204039 ENCODE Processing Pipeline 6664da9ea0894c419435a2392f54c963 https://www.encodeproject.org/files/ENCFF771KDO/@@download/ENCFF771KDO.bigBed hg19 released antibody characterized with exemption ENCFF748NDQ bigBed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF521SLC 13094651 ENCODE Processing Pipeline 42147cd661d828376cf211abb1f31a9e https://www.encodeproject.org/files/ENCFF748NDQ/@@download/ENCFF748NDQ.bigBed hg19 released antibody characterized with exemption ENCFF627LBM bigBed narrowPeak peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF424PAM 13222956 ENCODE Processing Pipeline b0e83dea0323d7a1839f0eddd075b914 https://www.encodeproject.org/files/ENCFF627LBM/@@download/ENCFF627LBM.bigBed hg19 released antibody characterized with exemption ENCFF500LWT bigBed narrowPeak conservative idr thresholded peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF262NES 1430836 ENCODE Processing Pipeline 6635304b728a2aad02f72bb4512db5a1 https://www.encodeproject.org/files/ENCFF500LWT/@@download/ENCFF500LWT.bigBed hg19 released antibody characterized with exemption ENCFF262NES bed narrowPeak conservative idr thresholded peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF424PAM, ENCFF521SLC, ENCFF614RLB 701764 ENCODE Processing Pipeline 02693246bad910d2b4a56b816812fd54 https://www.encodeproject.org/files/ENCFF262NES/@@download/ENCFF262NES.bed.gz hg19 released antibody characterized with exemption ENCFF896NJN bigBed narrowPeak optimal idr thresholded peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF391UDD 1599792 ENCODE Processing Pipeline 6a62a27de478994baa82895c69f4997e https://www.encodeproject.org/files/ENCFF896NJN/@@download/ENCFF896NJN.bigBed hg19 released antibody characterized with exemption ENCFF391UDD bed narrowPeak optimal idr thresholded peaks ENCSR715UCI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX13-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF424PAM, ENCFF521SLC, ENCFF614RLB 816365 ENCODE Processing Pipeline b74563c89c8616c01d6853624ca6f8a2 https://www.encodeproject.org/files/ENCFF391UDD/@@download/ENCFF391UDD.bed.gz hg19 released antibody characterized with exemption ENCFF914FOC fastq reads ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2564142105 Richard Myers, HAIB 0e99cdac3410f44de8d383393855866f SRA:SRR5339272 https://www.encodeproject.org/files/ENCFF914FOC/@@download/ENCFF914FOC.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF948EZE fastq reads ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2338080274 Richard Myers, HAIB 9e75a3b0235b8dfc92996efd8d950296 SRA:SRR5339273 https://www.encodeproject.org/files/ENCFF948EZE/@@download/ENCFF948EZE.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF923LAX bam unfiltered alignments ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF914FOC 3036640799 ENCODE Processing Pipeline 28f0cb5d8c7eab00138b6f3b2a1c67fb https://www.encodeproject.org/files/ENCFF923LAX/@@download/ENCFF923LAX.bam hg19 released antibody characterized with exemption ENCFF706OKF bam unfiltered alignments ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF948EZE 2747983732 ENCODE Processing Pipeline db0c1178c125f5d7766834e6dc253007 https://www.encodeproject.org/files/ENCFF706OKF/@@download/ENCFF706OKF.bam hg19 released antibody characterized with exemption ENCFF359SGD bam unfiltered alignments ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF948EZE 2754161642 ENCODE Processing Pipeline 42ab70230f27261fbdcd5d8aed66abaf https://www.encodeproject.org/files/ENCFF359SGD/@@download/ENCFF359SGD.bam GRCh38 released antibody characterized with exemption ENCFF545AHU bam unfiltered alignments ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF914FOC 3043042535 ENCODE Processing Pipeline 90a91b8c73b8ab2370d12a4955f48a02 https://www.encodeproject.org/files/ENCFF545AHU/@@download/ENCFF545AHU.bam GRCh38 released antibody characterized with exemption ENCFF408DIJ bam alignments ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF948EZE 1959238495 ENCODE Processing Pipeline b30f51db99abbac2317b49f0beb209ad https://www.encodeproject.org/files/ENCFF408DIJ/@@download/ENCFF408DIJ.bam GRCh38 released antibody characterized with exemption ENCFF358IWC bam alignments ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF948EZE 1958243461 ENCODE Processing Pipeline 048ec52c66b355366f02126b7ec09dff https://www.encodeproject.org/files/ENCFF358IWC/@@download/ENCFF358IWC.bam hg19 released antibody characterized with exemption ENCFF511GQK bam alignments ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF914FOC 2187227073 ENCODE Processing Pipeline e883bd578ec65c303c9c8ea0cdb85537 https://www.encodeproject.org/files/ENCFF511GQK/@@download/ENCFF511GQK.bam hg19 released antibody characterized with exemption ENCFF317HWD bam alignments ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF914FOC 2188286279 ENCODE Processing Pipeline f6fd800b285c50e471c3b428c109b477 https://www.encodeproject.org/files/ENCFF317HWD/@@download/ENCFF317HWD.bam GRCh38 released antibody characterized with exemption ENCFF576JWY bigWig signal p-value ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF408DIJ 639055754 ENCODE Processing Pipeline 2777869ac15415601f59a47c4cf3d047 https://www.encodeproject.org/files/ENCFF576JWY/@@download/ENCFF576JWY.bigWig GRCh38 released antibody characterized with exemption ENCFF382CSN bigWig signal p-value ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF317HWD 666312620 ENCODE Processing Pipeline 554150fba986b22c2c16acc97a4786eb https://www.encodeproject.org/files/ENCFF382CSN/@@download/ENCFF382CSN.bigWig GRCh38 released antibody characterized with exemption ENCFF648HUD bigWig signal p-value ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF317HWD, ENCFF408DIJ 672788774 ENCODE Processing Pipeline e17c8dfcc03550faa225f46381cd582d https://www.encodeproject.org/files/ENCFF648HUD/@@download/ENCFF648HUD.bigWig GRCh38 released antibody characterized with exemption ENCFF485YRO bigWig fold change over control ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF317HWD 664463237 ENCODE Processing Pipeline ccc006835a54e418921b73af571a4338 https://www.encodeproject.org/files/ENCFF485YRO/@@download/ENCFF485YRO.bigWig GRCh38 released antibody characterized with exemption ENCFF311BHZ bigWig fold change over control ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF317HWD, ENCFF408DIJ 1058388316 ENCODE Processing Pipeline c2b33ffcc2412f562dc06cdd546b8ba6 https://www.encodeproject.org/files/ENCFF311BHZ/@@download/ENCFF311BHZ.bigWig GRCh38 released antibody characterized with exemption ENCFF564IUH bigBed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF685NJO 13080776 ENCODE Processing Pipeline 7e362658baa45b9803bf63aa19bb71b9 https://www.encodeproject.org/files/ENCFF564IUH/@@download/ENCFF564IUH.bigBed GRCh38 released antibody characterized with exemption ENCFF492TSB bigBed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF716PEJ 13041849 ENCODE Processing Pipeline 5d9580f5a09639190a85aba258ef2a3c https://www.encodeproject.org/files/ENCFF492TSB/@@download/ENCFF492TSB.bigBed GRCh38 released antibody characterized with exemption ENCFF088QFL bigBed narrowPeak conservative idr thresholded peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF253LJN 1289435 ENCODE Processing Pipeline 1ffd8b668d06b79244a879929765ca4e https://www.encodeproject.org/files/ENCFF088QFL/@@download/ENCFF088QFL.bigBed GRCh38 released antibody characterized with exemption ENCFF454ZXF bigWig fold change over control ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF408DIJ 610415142 ENCODE Processing Pipeline a75c1ad1287f7b5e582253f9931e862e https://www.encodeproject.org/files/ENCFF454ZXF/@@download/ENCFF454ZXF.bigWig GRCh38 released antibody characterized with exemption ENCFF364EBP bed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF408DIJ 6203919 ENCODE Processing Pipeline bd3d66e8cf28059aa7b4fdabd790129c https://www.encodeproject.org/files/ENCFF364EBP/@@download/ENCFF364EBP.bed.gz GRCh38 released antibody characterized with exemption ENCFF685NJO bed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF317HWD 6177362 ENCODE Processing Pipeline 80e654e9eb01c756f85d18b0f88c7996 https://www.encodeproject.org/files/ENCFF685NJO/@@download/ENCFF685NJO.bed.gz GRCh38 released antibody characterized with exemption ENCFF716PEJ bed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF317HWD, ENCFF408DIJ 6784964 ENCODE Processing Pipeline 8ef1ce3795320567e4feeb8bc9f02480 https://www.encodeproject.org/files/ENCFF716PEJ/@@download/ENCFF716PEJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF253LJN bed narrowPeak conservative idr thresholded peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF364EBP, ENCFF419RSJ, ENCFF685NJO, ENCFF716PEJ 669671 ENCODE Processing Pipeline aadc5ef2ae1d57fece3a50f5fd82bc4e https://www.encodeproject.org/files/ENCFF253LJN/@@download/ENCFF253LJN.bed.gz GRCh38 released antibody characterized with exemption ENCFF081TRD bigBed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF364EBP 13131219 ENCODE Processing Pipeline 3f174606531e40ae8154362e884a38b9 https://www.encodeproject.org/files/ENCFF081TRD/@@download/ENCFF081TRD.bigBed GRCh38 released antibody characterized with exemption ENCFF014UTU bed narrowPeak optimal idr thresholded peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF364EBP, ENCFF419RSJ, ENCFF685NJO, ENCFF716PEJ 682689 ENCODE Processing Pipeline d073c03fd860893c7b587ec1e14f3362 https://www.encodeproject.org/files/ENCFF014UTU/@@download/ENCFF014UTU.bed.gz GRCh38 released antibody characterized with exemption ENCFF206FLX bigBed narrowPeak optimal idr thresholded peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF014UTU 1310050 ENCODE Processing Pipeline 7858e0098ad98b2da00c37bd4777c52f https://www.encodeproject.org/files/ENCFF206FLX/@@download/ENCFF206FLX.bigBed GRCh38 released antibody characterized with exemption ENCFF418PBN bigWig signal p-value ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF511GQK 1285044768 ENCODE Processing Pipeline 779a48f7bf8baeea89d2a3f69895e7e0 https://www.encodeproject.org/files/ENCFF418PBN/@@download/ENCFF418PBN.bigWig hg19 released antibody characterized with exemption ENCFF087FSW bigWig signal p-value ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF358IWC 1323163518 ENCODE Processing Pipeline 2b61ed8981a8dc800325aad5e29343f3 https://www.encodeproject.org/files/ENCFF087FSW/@@download/ENCFF087FSW.bigWig hg19 released antibody characterized with exemption ENCFF216SNF bigWig signal p-value ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF358IWC, ENCFF511GQK 1681906352 ENCODE Processing Pipeline e33226ad10173d9c88f925808f10fa83 https://www.encodeproject.org/files/ENCFF216SNF/@@download/ENCFF216SNF.bigWig hg19 released antibody characterized with exemption ENCFF878XUT bigWig fold change over control ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF511GQK 1215650991 ENCODE Processing Pipeline 31e389bbb4dfa56c64410812ce147f98 https://www.encodeproject.org/files/ENCFF878XUT/@@download/ENCFF878XUT.bigWig hg19 released antibody characterized with exemption ENCFF720HCY bigWig fold change over control ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF358IWC 1129609634 ENCODE Processing Pipeline 8ae2265dcb86e9a7ce888db6eda06aa0 https://www.encodeproject.org/files/ENCFF720HCY/@@download/ENCFF720HCY.bigWig hg19 released antibody characterized with exemption ENCFF160GBM bigWig fold change over control ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF358IWC, ENCFF511GQK 1641487454 ENCODE Processing Pipeline a7d6ed37582cdb57a1e74007e1f2b687 https://www.encodeproject.org/files/ENCFF160GBM/@@download/ENCFF160GBM.bigWig hg19 released antibody characterized with exemption ENCFF035ILO bed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF511GQK 6746278 ENCODE Processing Pipeline cc33b5ab9cc746d3349b6bc34bb21e0d https://www.encodeproject.org/files/ENCFF035ILO/@@download/ENCFF035ILO.bed.gz hg19 released antibody characterized with exemption ENCFF855PEP bed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF358IWC 6627792 ENCODE Processing Pipeline 622c25fdbfe37b01dfb21de907e24a14 https://www.encodeproject.org/files/ENCFF855PEP/@@download/ENCFF855PEP.bed.gz hg19 released antibody characterized with exemption ENCFF382EUL bed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF358IWC, ENCFF511GQK 6970926 ENCODE Processing Pipeline 13ea798246ba8e0b529c740c40ca03ef https://www.encodeproject.org/files/ENCFF382EUL/@@download/ENCFF382EUL.bed.gz hg19 released antibody characterized with exemption ENCFF851FBL bigBed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF035ILO 13120449 ENCODE Processing Pipeline 5e16ec5a855aca96ae0b9f139f5cc7dc https://www.encodeproject.org/files/ENCFF851FBL/@@download/ENCFF851FBL.bigBed hg19 released antibody characterized with exemption ENCFF102UFN bigBed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF855PEP 13090627 ENCODE Processing Pipeline 15e78114da44fef4bf0badf1a33e98f8 https://www.encodeproject.org/files/ENCFF102UFN/@@download/ENCFF102UFN.bigBed hg19 released antibody characterized with exemption ENCFF333VQM bigBed narrowPeak peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF382EUL 13118764 ENCODE Processing Pipeline a71e44a1a642ec2b8c6ecb36227b9708 https://www.encodeproject.org/files/ENCFF333VQM/@@download/ENCFF333VQM.bigBed hg19 released antibody characterized with exemption ENCFF309LPU bigBed narrowPeak conservative idr thresholded peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF791AQG 1317710 ENCODE Processing Pipeline 148be1a7cc27f1abfd88bcaf9bd283f3 https://www.encodeproject.org/files/ENCFF309LPU/@@download/ENCFF309LPU.bigBed hg19 released antibody characterized with exemption ENCFF791AQG bed narrowPeak conservative idr thresholded peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF035ILO, ENCFF382EUL, ENCFF855PEP 658009 ENCODE Processing Pipeline 3ae198a9077876276e399aafd1b061e4 https://www.encodeproject.org/files/ENCFF791AQG/@@download/ENCFF791AQG.bed.gz hg19 released antibody characterized with exemption ENCFF693ZXB bed narrowPeak optimal idr thresholded peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF035ILO, ENCFF382EUL, ENCFF855PEP 668818 ENCODE Processing Pipeline a1570bdc5faa2092aabd6469237691e8 https://www.encodeproject.org/files/ENCFF693ZXB/@@download/ENCFF693ZXB.bed.gz hg19 released antibody characterized with exemption ENCFF084HBG bigBed narrowPeak optimal idr thresholded peaks ENCSR759BDG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-BCL6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF693ZXB 1336467 ENCODE Processing Pipeline ffdc710b74760432c74d67d0c7050427 https://www.encodeproject.org/files/ENCFF084HBG/@@download/ENCFF084HBG.bigBed hg19 released antibody characterized with exemption ENCFF325WEY fastq reads ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1455378576 Richard Myers, HAIB 12b1ea23fd356d3ba7356a0155f56004 SRA:SRR5339148 https://www.encodeproject.org/files/ENCFF325WEY/@@download/ENCFF325WEY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF911VFY fastq reads ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1381200283 Richard Myers, HAIB e2ecb10fb1809fc63dd4524fb1805bbc SRA:SRR5339149 https://www.encodeproject.org/files/ENCFF911VFY/@@download/ENCFF911VFY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF587OET bam unfiltered alignments ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF325WEY, ENCFF643CGH 1761695322 ENCODE Processing Pipeline eee8ad514c93d5c840bb605f6f85237a https://www.encodeproject.org/files/ENCFF587OET/@@download/ENCFF587OET.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF020KTO bam unfiltered alignments ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF911VFY 1652318320 ENCODE Processing Pipeline f6593d55e222623ebaef56f9beafffb3 https://www.encodeproject.org/files/ENCFF020KTO/@@download/ENCFF020KTO.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF047EZI bam unfiltered alignments ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF325WEY, ENCFF807MUK 1756231857 ENCODE Processing Pipeline 9ae075dd7f570ead1eab29ada102e73d https://www.encodeproject.org/files/ENCFF047EZI/@@download/ENCFF047EZI.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF617JCI bam unfiltered alignments ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF911VFY 1657112171 ENCODE Processing Pipeline d8beba5b67dc54eab282cbec3a892539 https://www.encodeproject.org/files/ENCFF617JCI/@@download/ENCFF617JCI.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF785WJN bam alignments ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF325WEY, ENCFF643CGH 1377582799 ENCODE Processing Pipeline e923e49f41d72070978a5893e1527f68 https://www.encodeproject.org/files/ENCFF785WJN/@@download/ENCFF785WJN.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF239NUC bam alignments ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF911VFY 1200253465 ENCODE Processing Pipeline 48fae87ce0047fb260cec973f4a06cab https://www.encodeproject.org/files/ENCFF239NUC/@@download/ENCFF239NUC.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF581SJH bam alignments ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF325WEY, ENCFF807MUK 1376251380 ENCODE Processing Pipeline 11aa85d605420010efe83263a7c86924 https://www.encodeproject.org/files/ENCFF581SJH/@@download/ENCFF581SJH.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF178FQM bam alignments ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF911VFY 1201205256 ENCODE Processing Pipeline 5f2b5ee9c8b65ebd63d1beba001cb941 https://www.encodeproject.org/files/ENCFF178FQM/@@download/ENCFF178FQM.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF904CUK bigWig signal p-value ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF178FQM 572586459 ENCODE Processing Pipeline 5f66a7c8b65c38f0c99e0c54ca029a58 https://www.encodeproject.org/files/ENCFF904CUK/@@download/ENCFF904CUK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF303QBG bigWig signal p-value ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF785WJN 593631221 ENCODE Processing Pipeline 6892843fd84831dc6896aa6c205cac22 https://www.encodeproject.org/files/ENCFF303QBG/@@download/ENCFF303QBG.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF458HJL bigWig signal p-value ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF178FQM, ENCFF785WJN 643205673 ENCODE Processing Pipeline 703b030328ba2915b64b1c76f8225991 https://www.encodeproject.org/files/ENCFF458HJL/@@download/ENCFF458HJL.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF243VMQ bigWig fold change over control ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF178FQM 460212329 ENCODE Processing Pipeline 0ef37a86db04f23892bf243f304b64f5 https://www.encodeproject.org/files/ENCFF243VMQ/@@download/ENCFF243VMQ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF452RWY bigWig fold change over control ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF785WJN 476424243 ENCODE Processing Pipeline 1bbb13d5945d0aea39f54df6ee1058f4 https://www.encodeproject.org/files/ENCFF452RWY/@@download/ENCFF452RWY.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF027EMM bigWig fold change over control ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF178FQM, ENCFF785WJN 799739574 ENCODE Processing Pipeline 3c2c52b12430ce23bdbada35f2cf1fa6 https://www.encodeproject.org/files/ENCFF027EMM/@@download/ENCFF027EMM.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF144UDC bed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF178FQM 4734456 ENCODE Processing Pipeline 85fe6434103f5aa1a37cbeac38110021 https://www.encodeproject.org/files/ENCFF144UDC/@@download/ENCFF144UDC.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF233GRG bed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF785WJN 5216380 ENCODE Processing Pipeline 533b1436e544b8cfb34624c05884d9c7 https://www.encodeproject.org/files/ENCFF233GRG/@@download/ENCFF233GRG.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF257JTS bed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF178FQM, ENCFF785WJN 3909625 ENCODE Processing Pipeline 7d4e87c170db377b7050936c7dd4686b https://www.encodeproject.org/files/ENCFF257JTS/@@download/ENCFF257JTS.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF535ZJX bigBed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF144UDC 10855517 ENCODE Processing Pipeline abb344b9e25d9a4ba56c2f19cef46c98 https://www.encodeproject.org/files/ENCFF535ZJX/@@download/ENCFF535ZJX.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF297TDF bigBed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF233GRG 11065641 ENCODE Processing Pipeline 31dc6135d3a01757150a26c496d6dbc3 https://www.encodeproject.org/files/ENCFF297TDF/@@download/ENCFF297TDF.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF975ZEI bigBed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF257JTS 8581709 ENCODE Processing Pipeline bf7a862015e07edd4bb6d2eadf9d2c44 https://www.encodeproject.org/files/ENCFF975ZEI/@@download/ENCFF975ZEI.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF587IRE bigBed narrowPeak conservative idr thresholded peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF554QVX 391739 ENCODE Processing Pipeline 58d51e4ada99541c4a98c9dc4a8a5ef0 https://www.encodeproject.org/files/ENCFF587IRE/@@download/ENCFF587IRE.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF554QVX bed narrowPeak conservative idr thresholded peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF144UDC, ENCFF233GRG, ENCFF257JTS, ENCFF419RSJ 186824 ENCODE Processing Pipeline adca6767931e53a376a69611bcdd4cd0 https://www.encodeproject.org/files/ENCFF554QVX/@@download/ENCFF554QVX.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF295CUB bed narrowPeak optimal idr thresholded peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF144UDC, ENCFF233GRG, ENCFF257JTS, ENCFF419RSJ 231114 ENCODE Processing Pipeline 06768d1ab4e618567fd2108fb8fec386 https://www.encodeproject.org/files/ENCFF295CUB/@@download/ENCFF295CUB.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF828QQY bigBed narrowPeak optimal idr thresholded peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF295CUB 455754 ENCODE Processing Pipeline 982887b9a12c9d0f57354f61e1e1b3cd https://www.encodeproject.org/files/ENCFF828QQY/@@download/ENCFF828QQY.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF683NKJ bigWig signal p-value ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF239NUC 1066508165 ENCODE Processing Pipeline 3a4f455d38d0d850b4187ec7904c6490 https://www.encodeproject.org/files/ENCFF683NKJ/@@download/ENCFF683NKJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF795GFW bigWig signal p-value ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF581SJH 1256229995 ENCODE Processing Pipeline 8045704faa8fd3f93e4708ef05f1fde4 https://www.encodeproject.org/files/ENCFF795GFW/@@download/ENCFF795GFW.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF162FKC bigWig signal p-value ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF239NUC, ENCFF581SJH 1245254477 ENCODE Processing Pipeline 6b97ec3e5a072a8d46b41f3eef31bd2e https://www.encodeproject.org/files/ENCFF162FKC/@@download/ENCFF162FKC.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF708ULS bigWig fold change over control ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF239NUC 824081428 ENCODE Processing Pipeline f8d5b61eee963bd6a5e9729cfca2c212 https://www.encodeproject.org/files/ENCFF708ULS/@@download/ENCFF708ULS.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF721HKQ bigWig fold change over control ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF581SJH 905176879 ENCODE Processing Pipeline 429f38f63ccaf20d1feba59c83ce4016 https://www.encodeproject.org/files/ENCFF721HKQ/@@download/ENCFF721HKQ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF322YEC bigWig fold change over control ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF239NUC, ENCFF581SJH 1341158190 ENCODE Processing Pipeline fd246903a79652d7571de4f40a9f5edf https://www.encodeproject.org/files/ENCFF322YEC/@@download/ENCFF322YEC.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF036XYH bed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF239NUC 5811044 ENCODE Processing Pipeline 8c0582824968db8c07dc0c0a1ae21c67 https://www.encodeproject.org/files/ENCFF036XYH/@@download/ENCFF036XYH.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF869IAV bed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF239NUC, ENCFF581SJH 6593714 ENCODE Processing Pipeline bb581d2db0e9605987966e27392e33fd https://www.encodeproject.org/files/ENCFF869IAV/@@download/ENCFF869IAV.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF776ZOB bigBed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF036XYH 11365085 ENCODE Processing Pipeline bc4c66c2d510cfa50e75d38f818d0c09 https://www.encodeproject.org/files/ENCFF776ZOB/@@download/ENCFF776ZOB.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF632ICT bigBed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF399NVO 11269019 ENCODE Processing Pipeline 6eb075a7dfca7709ab9e317d63130663 https://www.encodeproject.org/files/ENCFF632ICT/@@download/ENCFF632ICT.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF399NVO bed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF581SJH 5975742 ENCODE Processing Pipeline 413f6760f41103dd1844ac503bd7d81b https://www.encodeproject.org/files/ENCFF399NVO/@@download/ENCFF399NVO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF288MWR bigBed narrowPeak conservative idr thresholded peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF691BBP 407626 ENCODE Processing Pipeline 98062452c4af427c6ee56d4f59ec7ae6 https://www.encodeproject.org/files/ENCFF288MWR/@@download/ENCFF288MWR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF319NZE bigBed narrowPeak peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF869IAV 13538272 ENCODE Processing Pipeline cfa0f7406acbc4fa26bec340602adec3 https://www.encodeproject.org/files/ENCFF319NZE/@@download/ENCFF319NZE.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF691BBP bed narrowPeak conservative idr thresholded peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF036XYH, ENCFF399NVO, ENCFF869IAV 187959 ENCODE Processing Pipeline 1ec6dea0af30535bd540007855da628b https://www.encodeproject.org/files/ENCFF691BBP/@@download/ENCFF691BBP.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF007HXS bed narrowPeak optimal idr thresholded peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF036XYH, ENCFF399NVO, ENCFF869IAV 230704 ENCODE Processing Pipeline fbdcc436a522c0dee1037d893eced7d3 https://www.encodeproject.org/files/ENCFF007HXS/@@download/ENCFF007HXS.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF685PAG bigBed narrowPeak optimal idr thresholded peaks ENCSR662EOU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF007HXS 470194 ENCODE Processing Pipeline 3ab1579af902342b982b0a2b975f0c82 https://www.encodeproject.org/files/ENCFF685PAG/@@download/ENCFF685PAG.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF068PBQ fastq reads ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2232661054 Richard Myers, HAIB 9de6e9c3300e9d415145a734d4b82f9b SRA:SRR5339144 https://www.encodeproject.org/files/ENCFF068PBQ/@@download/ENCFF068PBQ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF383FTW fastq reads ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2012531426 Richard Myers, HAIB b7a4244f6b1c3b1fe2cd149447b68c46 SRA:SRR5339145 https://www.encodeproject.org/files/ENCFF383FTW/@@download/ENCFF383FTW.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF101BQK bam alignments ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF068PBQ, ENCFF807MUK 2047542572 ENCODE Processing Pipeline da665246ad8c38a316687138098d094e https://www.encodeproject.org/files/ENCFF101BQK/@@download/ENCFF101BQK.bam hg19 released antibody characterized with exemption ENCFF970YTR bam unfiltered alignments ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF068PBQ, ENCFF807MUK 2695310863 ENCODE Processing Pipeline 9a104e243e09add6d92a27511494151e https://www.encodeproject.org/files/ENCFF970YTR/@@download/ENCFF970YTR.bam hg19 released antibody characterized with exemption ENCFF124TLC bam unfiltered alignments ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF383FTW, ENCFF807MUK 2451681319 ENCODE Processing Pipeline cc6c41ab717a57368b41f5f9a401e853 https://www.encodeproject.org/files/ENCFF124TLC/@@download/ENCFF124TLC.bam hg19 released antibody characterized with exemption ENCFF378PCU bam alignments ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF383FTW, ENCFF807MUK 1926843228 ENCODE Processing Pipeline 39ede5d027fa29e0eb2f028516c54190 https://www.encodeproject.org/files/ENCFF378PCU/@@download/ENCFF378PCU.bam hg19 released antibody characterized with exemption ENCFF437BCQ bam unfiltered alignments ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF068PBQ, ENCFF643CGH 2703401260 ENCODE Processing Pipeline 92ff220af7d4c9a44601295a70e20001 https://www.encodeproject.org/files/ENCFF437BCQ/@@download/ENCFF437BCQ.bam GRCh38 released antibody characterized with exemption ENCFF553QXD bam alignments ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF068PBQ, ENCFF643CGH 2049119246 ENCODE Processing Pipeline b2c4e4b96d2a406d2727378dab18203b https://www.encodeproject.org/files/ENCFF553QXD/@@download/ENCFF553QXD.bam GRCh38 released antibody characterized with exemption ENCFF681PWS bam unfiltered alignments ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF383FTW, ENCFF643CGH 2459876405 ENCODE Processing Pipeline d00bb654dbd463139f6ada509c16238c https://www.encodeproject.org/files/ENCFF681PWS/@@download/ENCFF681PWS.bam GRCh38 released antibody characterized with exemption ENCFF685WAA bam alignments ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF383FTW, ENCFF643CGH 1928675958 ENCODE Processing Pipeline a6b18b2a64a7a2d86736475b1f301c4b https://www.encodeproject.org/files/ENCFF685WAA/@@download/ENCFF685WAA.bam GRCh38 released antibody characterized with exemption ENCFF402YSA bigWig signal p-value ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF685WAA 642798189 ENCODE Processing Pipeline 67e9d01b926c23f612d8524ae0da2319 https://www.encodeproject.org/files/ENCFF402YSA/@@download/ENCFF402YSA.bigWig GRCh38 released antibody characterized with exemption ENCFF765EEI bigWig signal p-value ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF553QXD 671494538 ENCODE Processing Pipeline 647fa45649bc2721486bd27873946874 https://www.encodeproject.org/files/ENCFF765EEI/@@download/ENCFF765EEI.bigWig GRCh38 released antibody characterized with exemption ENCFF513PCS bigWig signal p-value ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF553QXD, ENCFF685WAA 662436061 ENCODE Processing Pipeline b91a5c39c3e67b56b9839cc7339f2901 https://www.encodeproject.org/files/ENCFF513PCS/@@download/ENCFF513PCS.bigWig GRCh38 released antibody characterized with exemption ENCFF140ZHW bigWig fold change over control ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF553QXD 696293320 ENCODE Processing Pipeline c63dad7678d4e71ad0298d5f28037d4f https://www.encodeproject.org/files/ENCFF140ZHW/@@download/ENCFF140ZHW.bigWig GRCh38 released antibody characterized with exemption ENCFF851YMO bigWig fold change over control ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF553QXD, ENCFF685WAA 1097024492 ENCODE Processing Pipeline cb75483d58a0e260a347b2a038a212c8 https://www.encodeproject.org/files/ENCFF851YMO/@@download/ENCFF851YMO.bigWig GRCh38 released antibody characterized with exemption ENCFF024CVJ bigWig fold change over control ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF685WAA 644552954 ENCODE Processing Pipeline 3dc0ba314f4c1c9f137829b7656b69a1 https://www.encodeproject.org/files/ENCFF024CVJ/@@download/ENCFF024CVJ.bigWig GRCh38 released antibody characterized with exemption ENCFF490TVK bed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF553QXD 5737264 ENCODE Processing Pipeline d0c8c0b6bbd2137e7d16e93d1b291e18 https://www.encodeproject.org/files/ENCFF490TVK/@@download/ENCFF490TVK.bed.gz GRCh38 released antibody characterized with exemption ENCFF225AMW bigBed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF514DMF 11221270 ENCODE Processing Pipeline 8825ded51e917e5afa93f3ced402e5c0 https://www.encodeproject.org/files/ENCFF225AMW/@@download/ENCFF225AMW.bigBed GRCh38 released antibody characterized with exemption ENCFF895WKC bigBed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF490TVK 13360207 ENCODE Processing Pipeline f2a0abaf42bf0310d4de4c8138d11d1a https://www.encodeproject.org/files/ENCFF895WKC/@@download/ENCFF895WKC.bigBed GRCh38 released antibody characterized with exemption ENCFF514DMF bed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF685WAA 5263326 ENCODE Processing Pipeline 61d52cacb379a100474432f3f98ab45e https://www.encodeproject.org/files/ENCFF514DMF/@@download/ENCFF514DMF.bed.gz GRCh38 released antibody characterized with exemption ENCFF790LLT bed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF553QXD, ENCFF685WAA 6394382 ENCODE Processing Pipeline 090ec064a8a8042492a870647e9e4997 https://www.encodeproject.org/files/ENCFF790LLT/@@download/ENCFF790LLT.bed.gz GRCh38 released antibody characterized with exemption ENCFF264GLW bigBed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF790LLT 13191924 ENCODE Processing Pipeline ddcbcac0e3f7d622b018456c97fae2be https://www.encodeproject.org/files/ENCFF264GLW/@@download/ENCFF264GLW.bigBed GRCh38 released antibody characterized with exemption ENCFF759QNJ bigBed narrowPeak conservative idr thresholded peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF016NUM 283234 ENCODE Processing Pipeline 3bdef12459b6144930fd059a5d798217 https://www.encodeproject.org/files/ENCFF759QNJ/@@download/ENCFF759QNJ.bigBed GRCh38 released antibody characterized with exemption ENCFF623GQJ bigBed narrowPeak optimal idr thresholded peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF431YWW 294772 ENCODE Processing Pipeline 95d65da58ffb9942868270b2aa9aec26 https://www.encodeproject.org/files/ENCFF623GQJ/@@download/ENCFF623GQJ.bigBed GRCh38 released antibody characterized with exemption ENCFF016NUM bed narrowPeak conservative idr thresholded peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF490TVK, ENCFF514DMF, ENCFF790LLT 112426 ENCODE Processing Pipeline e264de3145cfcb772a3398cdb9c1beda https://www.encodeproject.org/files/ENCFF016NUM/@@download/ENCFF016NUM.bed.gz GRCh38 released antibody characterized with exemption ENCFF431YWW bed narrowPeak optimal idr thresholded peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF490TVK, ENCFF514DMF, ENCFF790LLT 120317 ENCODE Processing Pipeline 0d67a99dd848859ae16bfd593725d313 https://www.encodeproject.org/files/ENCFF431YWW/@@download/ENCFF431YWW.bed.gz GRCh38 released antibody characterized with exemption ENCFF137IUV bigWig signal p-value ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF378PCU 1445189677 ENCODE Processing Pipeline 92eeda251e501eef37366d22fe5c6f51 https://www.encodeproject.org/files/ENCFF137IUV/@@download/ENCFF137IUV.bigWig hg19 released antibody characterized with exemption ENCFF675MYN bigWig signal p-value ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF101BQK, ENCFF203ABR 1292537619 ENCODE Processing Pipeline ea947d9bf2d9d6e50270f3c9bb855bf7 https://www.encodeproject.org/files/ENCFF675MYN/@@download/ENCFF675MYN.bigWig hg19 released antibody characterized with exemption ENCFF442OPZ bigWig signal p-value ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF101BQK, ENCFF203ABR, ENCFF378PCU 1740823279 ENCODE Processing Pipeline 2633a6377e0d64d684d4127e25e20fa5 https://www.encodeproject.org/files/ENCFF442OPZ/@@download/ENCFF442OPZ.bigWig hg19 released antibody characterized with exemption ENCFF411ZNU bigWig fold change over control ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF378PCU 1176941406 ENCODE Processing Pipeline 3b8ab202c3153c02cf92cb5af6a8f2d8 https://www.encodeproject.org/files/ENCFF411ZNU/@@download/ENCFF411ZNU.bigWig hg19 released antibody characterized with exemption ENCFF311NJO bigWig fold change over control ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF101BQK, ENCFF203ABR 1262145551 ENCODE Processing Pipeline 6de01b5c7bba5729245e1ae96751e044 https://www.encodeproject.org/files/ENCFF311NJO/@@download/ENCFF311NJO.bigWig hg19 released antibody characterized with exemption ENCFF227UAR bigWig fold change over control ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF101BQK, ENCFF203ABR, ENCFF378PCU 1777745724 ENCODE Processing Pipeline dd1e40e78ae5ca3a8103ae240feeb007 https://www.encodeproject.org/files/ENCFF227UAR/@@download/ENCFF227UAR.bigWig hg19 released antibody characterized with exemption ENCFF840FIK bed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF101BQK, ENCFF203ABR, ENCFF378PCU 7032828 ENCODE Processing Pipeline f627938b3727468ece59cfc982900b3b https://www.encodeproject.org/files/ENCFF840FIK/@@download/ENCFF840FIK.bed.gz hg19 released antibody characterized with exemption ENCFF074TSF bed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF378PCU 6260345 ENCODE Processing Pipeline ebf98b58bf9f340b1d5ef057e7c8ca89 https://www.encodeproject.org/files/ENCFF074TSF/@@download/ENCFF074TSF.bed.gz hg19 released antibody characterized with exemption ENCFF820QNK bigBed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF074TSF 13609948 ENCODE Processing Pipeline fd9d0dfa23a9f8d483c06c3f4b2f09ae https://www.encodeproject.org/files/ENCFF820QNK/@@download/ENCFF820QNK.bigBed hg19 released antibody characterized with exemption ENCFF819ZLV bed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF101BQK, ENCFF203ABR 6629888 ENCODE Processing Pipeline 538671cf8156e5669b7aa516f487832b https://www.encodeproject.org/files/ENCFF819ZLV/@@download/ENCFF819ZLV.bed.gz hg19 released antibody characterized with exemption ENCFF758MOB bigBed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF819ZLV 13483124 ENCODE Processing Pipeline fb143e9ab7be03ac708233da1d55a41a https://www.encodeproject.org/files/ENCFF758MOB/@@download/ENCFF758MOB.bigBed hg19 released antibody characterized with exemption ENCFF159BPQ bigBed narrowPeak peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF840FIK 13449951 ENCODE Processing Pipeline 88925427ba6cff4bfeaae91912c6d912 https://www.encodeproject.org/files/ENCFF159BPQ/@@download/ENCFF159BPQ.bigBed hg19 released antibody characterized with exemption ENCFF679SPF bed narrowPeak optimal idr thresholded peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF074TSF, ENCFF819ZLV, ENCFF840FIK 105934 ENCODE Processing Pipeline 58f3f1a2b5f9adedbf6f1aee3925c96b https://www.encodeproject.org/files/ENCFF679SPF/@@download/ENCFF679SPF.bed.gz hg19 released antibody characterized with exemption ENCFF071VWQ bigBed narrowPeak conservative idr thresholded peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF249IBI 218676 ENCODE Processing Pipeline d15235f41a22aa39bddd494202bde0b2 https://www.encodeproject.org/files/ENCFF071VWQ/@@download/ENCFF071VWQ.bigBed hg19 released antibody characterized with exemption ENCFF394UIG bigBed narrowPeak optimal idr thresholded peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF679SPF 227331 ENCODE Processing Pipeline ae6c816d7805de0a5f60d8b91be5855c https://www.encodeproject.org/files/ENCFF394UIG/@@download/ENCFF394UIG.bigBed hg19 released antibody characterized with exemption ENCFF249IBI bed narrowPeak conservative idr thresholded peaks ENCSR633OVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFX3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF074TSF, ENCFF819ZLV, ENCFF840FIK 99167 ENCODE Processing Pipeline bad9a2f42933be05eea845ec73c6309d https://www.encodeproject.org/files/ENCFF249IBI/@@download/ENCFF249IBI.bed.gz hg19 released antibody characterized with exemption ENCFF526NYU fastq reads ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 821717038 Richard Myers, HAIB 3d1ec6cbcff12cfff941ed18ba9994ae SRA:SRR5339030 https://www.encodeproject.org/files/ENCFF526NYU/@@download/ENCFF526NYU.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF253ROA fastq reads ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1328930452 Richard Myers, HAIB c6fb963d2ea446b39f5115046cd28574 SRA:SRR5339031 https://www.encodeproject.org/files/ENCFF253ROA/@@download/ENCFF253ROA.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF232RDZ bam alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF526NYU, ENCFF807MUK 708606305 ENCODE Processing Pipeline a8801a4f86ee0491ca7f22c5ff3d827a https://www.encodeproject.org/files/ENCFF232RDZ/@@download/ENCFF232RDZ.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF907MUS bam alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF253ROA, ENCFF807MUK 1153891348 ENCODE Processing Pipeline ab542e8c689b5b7df112acd2c3603594 https://www.encodeproject.org/files/ENCFF907MUS/@@download/ENCFF907MUS.bam hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF990SCZ bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF232RDZ 786005173 ENCODE Processing Pipeline 508dfe754a397b6da35f33561b27f984 https://www.encodeproject.org/files/ENCFF990SCZ/@@download/ENCFF990SCZ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF731VSK bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF907MUS 779647413 ENCODE Processing Pipeline b79e594b2529cc697952ccfb0fe79e2a https://www.encodeproject.org/files/ENCFF731VSK/@@download/ENCFF731VSK.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF218GXY bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF232RDZ, ENCFF907MUS 874640687 ENCODE Processing Pipeline 1b9fc0f3616bf0596bceeeb94367bcd1 https://www.encodeproject.org/files/ENCFF218GXY/@@download/ENCFF218GXY.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF916PYQ bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF907MUS 662302222 ENCODE Processing Pipeline 7a560024b079bdb59b0fc486610607bb https://www.encodeproject.org/files/ENCFF916PYQ/@@download/ENCFF916PYQ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF203KTC bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF232RDZ 532405781 ENCODE Processing Pipeline 23d3fb0b921e670afdf8a41f77e0e0f4 https://www.encodeproject.org/files/ENCFF203KTC/@@download/ENCFF203KTC.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF021SXQ bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF232RDZ, ENCFF907MUS 963354845 ENCODE Processing Pipeline f9d15936d35339c8893d6a99a4cef2cf https://www.encodeproject.org/files/ENCFF021SXQ/@@download/ENCFF021SXQ.bigWig hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF590NKV bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF597QZY 11630107 ENCODE Processing Pipeline 0ba46d45111c61a830d5e44a572fc09f https://www.encodeproject.org/files/ENCFF590NKV/@@download/ENCFF590NKV.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF597QZY bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF232RDZ, ENCFF907MUS 5919643 ENCODE Processing Pipeline 5663b0730a149ef14f905bc402ced55b https://www.encodeproject.org/files/ENCFF597QZY/@@download/ENCFF597QZY.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF003PSH bed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF539OHR, ENCFF597QZY, ENCFF906WAQ 70177 ENCODE Processing Pipeline fe52b915cd3c6bdc7a54add5484f1b6d https://www.encodeproject.org/files/ENCFF003PSH/@@download/ENCFF003PSH.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF624QDF bigBed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF003PSH 183011 ENCODE Processing Pipeline aa7a849ea6e2fea96cc2e8b6e4a2ac66 https://www.encodeproject.org/files/ENCFF624QDF/@@download/ENCFF624QDF.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF078CQD bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF539OHR 11224782 ENCODE Processing Pipeline dea4595092b14ad79128eaf94c074962 https://www.encodeproject.org/files/ENCFF078CQD/@@download/ENCFF078CQD.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF460HOI bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF906WAQ 11037671 ENCODE Processing Pipeline 8329e05c9de35087a07213d4f1740513 https://www.encodeproject.org/files/ENCFF460HOI/@@download/ENCFF460HOI.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF269EMM bed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF539OHR, ENCFF597QZY, ENCFF906WAQ 71060 ENCODE Processing Pipeline af53a063019d668f2053979d501052f0 https://www.encodeproject.org/files/ENCFF269EMM/@@download/ENCFF269EMM.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF165YNJ bigBed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF269EMM 184353 ENCODE Processing Pipeline 8cb1b38390ceebb13e40a29d9fe3f1a7 https://www.encodeproject.org/files/ENCFF165YNJ/@@download/ENCFF165YNJ.bigBed hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF539OHR bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF907MUS 5029003 ENCODE Processing Pipeline 139796eb1ef6b10e47dd7dcd30db30a3 https://www.encodeproject.org/files/ENCFF539OHR/@@download/ENCFF539OHR.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF906WAQ bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF232RDZ 4866259 ENCODE Processing Pipeline 08d4a0372abef1262df64685abf4d357 https://www.encodeproject.org/files/ENCFF906WAQ/@@download/ENCFF906WAQ.bed.gz hg19 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF072SKI bam alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF526NYU, ENCFF643CGH 708343934 ENCODE Processing Pipeline 4bade86559c4d07e006fc300cd46f8f4 https://www.encodeproject.org/files/ENCFF072SKI/@@download/ENCFF072SKI.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF100EJJ bam unfiltered alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF526NYU, ENCFF643CGH 940436271 ENCODE Processing Pipeline e8c0bcb0b3fbbb982fd1859945a3682a https://www.encodeproject.org/files/ENCFF100EJJ/@@download/ENCFF100EJJ.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF933PZQ bam unfiltered alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF253ROA, ENCFF643CGH 1524171628 ENCODE Processing Pipeline 7aa02943d9d5b3a9dc4a11ffc4da18d8 https://www.encodeproject.org/files/ENCFF933PZQ/@@download/ENCFF933PZQ.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF030XLK bam alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF253ROA, ENCFF643CGH 1153689566 ENCODE Processing Pipeline af8caa2694858009872092e34b9e23c8 https://www.encodeproject.org/files/ENCFF030XLK/@@download/ENCFF030XLK.bam GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF256VOX bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF030XLK, ENCFF332SVJ 865119991 ENCODE Processing Pipeline 0cf1882dc05bb45d6f0167bb1107639d https://www.encodeproject.org/files/ENCFF256VOX/@@download/ENCFF256VOX.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF923GZG bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF072SKI, ENCFF332SVJ 826378777 ENCODE Processing Pipeline c0a57ee59eb8dd3c623562acf450c7e0 https://www.encodeproject.org/files/ENCFF923GZG/@@download/ENCFF923GZG.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF848NVR bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF030XLK, ENCFF072SKI, ENCFF332SVJ 1026327441 ENCODE Processing Pipeline 85ea7855f034f8ae16e727da759f6ef4 https://www.encodeproject.org/files/ENCFF848NVR/@@download/ENCFF848NVR.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF838JMR bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF030XLK, ENCFF332SVJ 696890026 ENCODE Processing Pipeline e47a68c8c3e4302a9cbaa89319a6ed3b https://www.encodeproject.org/files/ENCFF838JMR/@@download/ENCFF838JMR.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF364TGB bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF072SKI, ENCFF332SVJ 530123314 ENCODE Processing Pipeline dddd4248670ec1f6d933a22682bd647e https://www.encodeproject.org/files/ENCFF364TGB/@@download/ENCFF364TGB.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF255VXF bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF030XLK, ENCFF072SKI, ENCFF332SVJ 981924076 ENCODE Processing Pipeline 37ceaa27d9b24bdff803c2b6b90733b0 https://www.encodeproject.org/files/ENCFF255VXF/@@download/ENCFF255VXF.bigWig GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF428CPW bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF030XLK, ENCFF332SVJ 4789332 ENCODE Processing Pipeline ac6bfa830672a3c48296508dab15ad48 https://www.encodeproject.org/files/ENCFF428CPW/@@download/ENCFF428CPW.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF479NRZ bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF030XLK, ENCFF072SKI, ENCFF332SVJ 5559162 ENCODE Processing Pipeline 1fe0e3b2fa1fbd6d5f49583c1e94b74d https://www.encodeproject.org/files/ENCFF479NRZ/@@download/ENCFF479NRZ.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF743XUM bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF428CPW 11116391 ENCODE Processing Pipeline 040d4de0b3147c8ab92032049d3be3f1 https://www.encodeproject.org/files/ENCFF743XUM/@@download/ENCFF743XUM.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF603XZJ bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF479NRZ 11626495 ENCODE Processing Pipeline ecdfd614829af32f2c281878f6ea44e9 https://www.encodeproject.org/files/ENCFF603XZJ/@@download/ENCFF603XZJ.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF958UWK bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF072SKI, ENCFF332SVJ 4569141 ENCODE Processing Pipeline 5833361a90c90b9a365f6a3de284a994 https://www.encodeproject.org/files/ENCFF958UWK/@@download/ENCFF958UWK.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF648NTJ bigBed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF925OBR 187356 ENCODE Processing Pipeline 391a1c7279f2d380f1d8614424d1f06f https://www.encodeproject.org/files/ENCFF648NTJ/@@download/ENCFF648NTJ.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF233ENP bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF958UWK 10917607 ENCODE Processing Pipeline 382837f9da03d6ba59538e2d03555c69 https://www.encodeproject.org/files/ENCFF233ENP/@@download/ENCFF233ENP.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF270VUX bed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF428CPW, ENCFF479NRZ, ENCFF958UWK 70616 ENCODE Processing Pipeline d2e6b29ef9a1a8ee426483e95978a335 https://www.encodeproject.org/files/ENCFF270VUX/@@download/ENCFF270VUX.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF185OAW bigBed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF270VUX 185774 ENCODE Processing Pipeline 0f19fbfcae4d92b256f10076fa8ca2e6 https://www.encodeproject.org/files/ENCFF185OAW/@@download/ENCFF185OAW.bigBed GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF925OBR bed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF428CPW, ENCFF479NRZ, ENCFF958UWK 71594 ENCODE Processing Pipeline a192e09fb75616923efec4f248adf041 https://www.encodeproject.org/files/ENCFF925OBR/@@download/ENCFF925OBR.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF287ADI fastq reads ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1623083597 Richard Myers, HAIB da1a36b807c378069625527e30cbec39 SRA:SRR5338714 https://www.encodeproject.org/files/ENCFF287ADI/@@download/ENCFF287ADI.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF521IXY fastq reads ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2024292514 Richard Myers, HAIB ab30f08ab18cd683df667230c9a03159 SRA:SRR5338713 https://www.encodeproject.org/files/ENCFF521IXY/@@download/ENCFF521IXY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF250ZEU bam alignments ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF521IXY, ENCFF643CGH 1915484676 ENCODE Processing Pipeline b7ae9f6d4848a17cc9728681878dd7f5 https://www.encodeproject.org/files/ENCFF250ZEU/@@download/ENCFF250ZEU.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF180NFM bam unfiltered alignments ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF287ADI, ENCFF807MUK 1867231258 ENCODE Processing Pipeline 5c629e6d892ee9efe949dc092d6cd4ac https://www.encodeproject.org/files/ENCFF180NFM/@@download/ENCFF180NFM.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF965CQC bam alignments ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF287ADI, ENCFF807MUK 1258641520 ENCODE Processing Pipeline ad55a500374dd28d5387e42e1db65d39 https://www.encodeproject.org/files/ENCFF965CQC/@@download/ENCFF965CQC.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF553BFP bam alignments ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF521IXY, ENCFF807MUK 1914057501 ENCODE Processing Pipeline 4304c9fcb1ef9bbf50ca82d01eafd212 https://www.encodeproject.org/files/ENCFF553BFP/@@download/ENCFF553BFP.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF634VRX bam unfiltered alignments ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF521IXY, ENCFF643CGH 2447069942 ENCODE Processing Pipeline dc222d25933ad9144ae3045a176a8b04 https://www.encodeproject.org/files/ENCFF634VRX/@@download/ENCFF634VRX.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF741KLN bam unfiltered alignments ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF287ADI, ENCFF643CGH 1869301577 ENCODE Processing Pipeline d3d0f9a2c10d4142ef880be166c85a25 https://www.encodeproject.org/files/ENCFF741KLN/@@download/ENCFF741KLN.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF407PYO bam unfiltered alignments ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF521IXY, ENCFF807MUK 2440178875 ENCODE Processing Pipeline 64d2b1fdb3e8b6f5710a2e32bba68a49 https://www.encodeproject.org/files/ENCFF407PYO/@@download/ENCFF407PYO.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF789XWO bam alignments ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF287ADI, ENCFF643CGH 1258849045 ENCODE Processing Pipeline ee209c30b70729344d0ae9eab4d775f1 https://www.encodeproject.org/files/ENCFF789XWO/@@download/ENCFF789XWO.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF402JDY bigWig fold change over control ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF789XWO 428584723 ENCODE Processing Pipeline 22d7e8e0bdd289dda2912aee6cdd7e9f https://www.encodeproject.org/files/ENCFF402JDY/@@download/ENCFF402JDY.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF256ZWF bigWig signal p-value ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF250ZEU 659156935 ENCODE Processing Pipeline 4068c4f970662d20c8503b8052533666 https://www.encodeproject.org/files/ENCFF256ZWF/@@download/ENCFF256ZWF.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF083RHA bigWig signal p-value ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF789XWO 570340923 ENCODE Processing Pipeline 8af9349a3e2887381bd8e89788d4375e https://www.encodeproject.org/files/ENCFF083RHA/@@download/ENCFF083RHA.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF982AAL bigWig signal p-value ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF250ZEU, ENCFF789XWO 678683820 ENCODE Processing Pipeline 20852d8d729f7d0d174e5edeae99291e https://www.encodeproject.org/files/ENCFF982AAL/@@download/ENCFF982AAL.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF042CIY bigWig fold change over control ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF250ZEU 626239977 ENCODE Processing Pipeline 79af090c0910d1fe41ff51ac812f8481 https://www.encodeproject.org/files/ENCFF042CIY/@@download/ENCFF042CIY.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF605TCK bigWig fold change over control ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF250ZEU, ENCFF789XWO 911285692 ENCODE Processing Pipeline 5ef0e98d0049827acbcef48ca8c4a37f https://www.encodeproject.org/files/ENCFF605TCK/@@download/ENCFF605TCK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF309FZW bed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF250ZEU 6283604 ENCODE Processing Pipeline d067c43b3d0ff35854c89d2488ecd613 https://www.encodeproject.org/files/ENCFF309FZW/@@download/ENCFF309FZW.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF225MMJ bigBed narrowPeak optimal idr thresholded peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF179NMB 1309812 ENCODE Processing Pipeline fd8b17eebbcf1fc6d0f0e9a6cdb7c97e https://www.encodeproject.org/files/ENCFF225MMJ/@@download/ENCFF225MMJ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF208JRS bigBed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF453PGL 12510397 ENCODE Processing Pipeline 997134a5d9190999dce05f4a17d5e8d4 https://www.encodeproject.org/files/ENCFF208JRS/@@download/ENCFF208JRS.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF400XLI bed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF789XWO 6852475 ENCODE Processing Pipeline 027ba973a64100bcea6fd67a6650f22d https://www.encodeproject.org/files/ENCFF400XLI/@@download/ENCFF400XLI.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF622EUH bed narrowPeak conservative idr thresholded peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF309FZW, ENCFF400XLI, ENCFF419RSJ, ENCFF453PGL 375363 ENCODE Processing Pipeline 359f738179f2bbae32fd86ad8913d0ad https://www.encodeproject.org/files/ENCFF622EUH/@@download/ENCFF622EUH.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF623WIB bigBed narrowPeak conservative idr thresholded peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF622EUH 748191 ENCODE Processing Pipeline c1a18c42d702e8c276012954104a69da https://www.encodeproject.org/files/ENCFF623WIB/@@download/ENCFF623WIB.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF179NMB bed narrowPeak optimal idr thresholded peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF309FZW, ENCFF400XLI, ENCFF419RSJ, ENCFF453PGL 598746 ENCODE Processing Pipeline 1c358b4723933cd381e9fe37752281fb https://www.encodeproject.org/files/ENCFF179NMB/@@download/ENCFF179NMB.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF954NFO bigBed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF309FZW 13078476 ENCODE Processing Pipeline 9f0109f538cf71ae9a18ae4a7310eafb https://www.encodeproject.org/files/ENCFF954NFO/@@download/ENCFF954NFO.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF538NYP bigBed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF400XLI 12266883 ENCODE Processing Pipeline 590eb6600e3b1edee3600d5ac2245eb4 https://www.encodeproject.org/files/ENCFF538NYP/@@download/ENCFF538NYP.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF453PGL bed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF250ZEU, ENCFF789XWO 7128048 ENCODE Processing Pipeline 99ea8699938f343c31fd3ba0799370cc https://www.encodeproject.org/files/ENCFF453PGL/@@download/ENCFF453PGL.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF813KLS bigWig signal p-value ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF553BFP 1403361373 ENCODE Processing Pipeline 69d93a2c80c224e3f783cea025037d29 https://www.encodeproject.org/files/ENCFF813KLS/@@download/ENCFF813KLS.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF116BFX bigWig signal p-value ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF965CQC 1252146534 ENCODE Processing Pipeline d868c2a357ee2393b72c284794f7a52b https://www.encodeproject.org/files/ENCFF116BFX/@@download/ENCFF116BFX.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF646ZYB bigWig signal p-value ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF553BFP, ENCFF965CQC 1578769278 ENCODE Processing Pipeline 87543f096b7060739779d3c4ccbcbd63 https://www.encodeproject.org/files/ENCFF646ZYB/@@download/ENCFF646ZYB.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF265LHH bigWig fold change over control ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF553BFP 1060720225 ENCODE Processing Pipeline 7290493e9aec43c23985abbd408197d5 https://www.encodeproject.org/files/ENCFF265LHH/@@download/ENCFF265LHH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF516UEC bigWig fold change over control ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF965CQC 787862544 ENCODE Processing Pipeline 644409af8b21065f95543d06e85efc61 https://www.encodeproject.org/files/ENCFF516UEC/@@download/ENCFF516UEC.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF674SCB bigWig fold change over control ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF553BFP, ENCFF965CQC 1471047731 ENCODE Processing Pipeline a65b2993744944e94aa3e6d6e71f7606 https://www.encodeproject.org/files/ENCFF674SCB/@@download/ENCFF674SCB.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF530ZYM bed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF553BFP 6933467 ENCODE Processing Pipeline 1a22c0fdb31099eea0a157fc240e41d7 https://www.encodeproject.org/files/ENCFF530ZYM/@@download/ENCFF530ZYM.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF525HIO bed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF553BFP, ENCFF965CQC 7040250 ENCODE Processing Pipeline 435c6e1e79cb60c5420073935b1b6d37 https://www.encodeproject.org/files/ENCFF525HIO/@@download/ENCFF525HIO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF060WBX bed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF965CQC 6831676 ENCODE Processing Pipeline c5d01810802b20670d1f08bb2293814c https://www.encodeproject.org/files/ENCFF060WBX/@@download/ENCFF060WBX.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF692BGW bigBed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF530ZYM 13045482 ENCODE Processing Pipeline f5554a9241ffb07933f0e0b3d3447d68 https://www.encodeproject.org/files/ENCFF692BGW/@@download/ENCFF692BGW.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF307HMF bigBed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF060WBX 12003612 ENCODE Processing Pipeline 792466db3c92984432f0aa6081e27173 https://www.encodeproject.org/files/ENCFF307HMF/@@download/ENCFF307HMF.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF531ERR bigBed narrowPeak peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF525HIO 12363651 ENCODE Processing Pipeline deabcc63f7d5a009891c238febd74bb4 https://www.encodeproject.org/files/ENCFF531ERR/@@download/ENCFF531ERR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF617JJO bed narrowPeak conservative idr thresholded peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF060WBX, ENCFF525HIO, ENCFF530ZYM 416910 ENCODE Processing Pipeline a0b209ba69bd81bc55103d537a34fad3 https://www.encodeproject.org/files/ENCFF617JJO/@@download/ENCFF617JJO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF916OSQ bed narrowPeak optimal idr thresholded peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF060WBX, ENCFF525HIO, ENCFF530ZYM 611201 ENCODE Processing Pipeline 11f0622c11f0e5b0170cab9af65aeabf https://www.encodeproject.org/files/ENCFF916OSQ/@@download/ENCFF916OSQ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF099ITO bigBed narrowPeak conservative idr thresholded peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF617JJO 830270 ENCODE Processing Pipeline 0c6eef58943980935dbe6b636c561055 https://www.encodeproject.org/files/ENCFF099ITO/@@download/ENCFF099ITO.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF723CKJ bigBed narrowPeak optimal idr thresholded peaks ENCSR415AEB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF48-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF916OSQ 1398808 ENCODE Processing Pipeline 0e430980d1d7c2a8689814594ef50ed5 https://www.encodeproject.org/files/ENCFF723CKJ/@@download/ENCFF723CKJ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF958ONK fastq reads ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1305231981 Richard Myers, HAIB 36660716aea776e687ee414aa8d4f870 SRA:SRR5339371 https://www.encodeproject.org/files/ENCFF958ONK/@@download/ENCFF958ONK.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF895HBS fastq reads ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1268176591 Richard Myers, HAIB 7a48952aeeb58fc9a7443e762d7b8899 SRA:SRR5339370 https://www.encodeproject.org/files/ENCFF895HBS/@@download/ENCFF895HBS.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF368GUS bam unfiltered alignments ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF958ONK 1562935747 ENCODE Processing Pipeline aa3161e9a160ecdefb313f920380382d https://www.encodeproject.org/files/ENCFF368GUS/@@download/ENCFF368GUS.bam hg19 released antibody characterized with exemption ENCFF581GYI bam unfiltered alignments ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF895HBS 1503683129 ENCODE Processing Pipeline b896adacb907bf839b44bf4459c075dc https://www.encodeproject.org/files/ENCFF581GYI/@@download/ENCFF581GYI.bam GRCh38 released antibody characterized with exemption ENCFF569GDP bam unfiltered alignments ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF958ONK 1566308234 ENCODE Processing Pipeline d0a9f847726582af568bbf058c5afea1 https://www.encodeproject.org/files/ENCFF569GDP/@@download/ENCFF569GDP.bam GRCh38 released antibody characterized with exemption ENCFF166IIU bam unfiltered alignments ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF895HBS 1500655975 ENCODE Processing Pipeline ffa8e724a7c584fb988827b421247f9d https://www.encodeproject.org/files/ENCFF166IIU/@@download/ENCFF166IIU.bam hg19 released antibody characterized with exemption ENCFF709KRI bam alignments ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF895HBS 1126521415 ENCODE Processing Pipeline 7f46888b0ebdf63bdff3765cb6bb5de7 https://www.encodeproject.org/files/ENCFF709KRI/@@download/ENCFF709KRI.bam GRCh38 released antibody characterized with exemption ENCFF617NGF bam alignments ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF958ONK 1169491373 ENCODE Processing Pipeline 8f494c97b8868853d546698c54be8988 https://www.encodeproject.org/files/ENCFF617NGF/@@download/ENCFF617NGF.bam GRCh38 released antibody characterized with exemption ENCFF538ZFY bam alignments ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF895HBS 1126004109 ENCODE Processing Pipeline de74a2225ee5ea7ea8c508547b51bfb0 https://www.encodeproject.org/files/ENCFF538ZFY/@@download/ENCFF538ZFY.bam hg19 released antibody characterized with exemption ENCFF124AKH bam alignments ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF958ONK 1168946231 ENCODE Processing Pipeline b355b063655ec498c3c72c84108aee79 https://www.encodeproject.org/files/ENCFF124AKH/@@download/ENCFF124AKH.bam hg19 released antibody characterized with exemption ENCFF475VZM bigWig signal p-value ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF709KRI 490670980 ENCODE Processing Pipeline 0c636ef824d53713347035d29dfe48d2 https://www.encodeproject.org/files/ENCFF475VZM/@@download/ENCFF475VZM.bigWig GRCh38 released antibody characterized with exemption ENCFF130UFC bigWig signal p-value ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF617NGF 441953731 ENCODE Processing Pipeline 22781791589a436e47f3ba48113cf96e https://www.encodeproject.org/files/ENCFF130UFC/@@download/ENCFF130UFC.bigWig GRCh38 released antibody characterized with exemption ENCFF417WTO bigWig fold change over control ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF709KRI 441986446 ENCODE Processing Pipeline 4b2e19f3238c528b73dcafe6175e4f49 https://www.encodeproject.org/files/ENCFF417WTO/@@download/ENCFF417WTO.bigWig GRCh38 released antibody characterized with exemption ENCFF938QCL bigWig signal p-value ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF617NGF, ENCFF709KRI 645053462 ENCODE Processing Pipeline 9ff3398839bb86e95273a829fc62808c https://www.encodeproject.org/files/ENCFF938QCL/@@download/ENCFF938QCL.bigWig GRCh38 released antibody characterized with exemption ENCFF120JDI bigWig fold change over control ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF617NGF 420484396 ENCODE Processing Pipeline 58c4624655e06bc6d8e0b83ef0b230fd https://www.encodeproject.org/files/ENCFF120JDI/@@download/ENCFF120JDI.bigWig GRCh38 released antibody characterized with exemption ENCFF033YFQ bigWig fold change over control ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF617NGF, ENCFF709KRI 718862709 ENCODE Processing Pipeline d165e68eb628c5b1082ff52ee2b36b83 https://www.encodeproject.org/files/ENCFF033YFQ/@@download/ENCFF033YFQ.bigWig GRCh38 released antibody characterized with exemption ENCFF055IDY bed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF709KRI 6092504 ENCODE Processing Pipeline f81ba9f5fc316f3ca0a2e2c6d4d87e68 https://www.encodeproject.org/files/ENCFF055IDY/@@download/ENCFF055IDY.bed.gz GRCh38 released antibody characterized with exemption ENCFF219NYJ bed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF617NGF, ENCFF709KRI 6663345 ENCODE Processing Pipeline 2016e6b248c280645b4c856d45df620e https://www.encodeproject.org/files/ENCFF219NYJ/@@download/ENCFF219NYJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF050THU bed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF617NGF 5612112 ENCODE Processing Pipeline 960d4bad737a6ef711727656800d5117 https://www.encodeproject.org/files/ENCFF050THU/@@download/ENCFF050THU.bed.gz GRCh38 released antibody characterized with exemption ENCFF513LBB bigBed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF055IDY 13021156 ENCODE Processing Pipeline b97232e7f8ace4e86bf504d9beea620d https://www.encodeproject.org/files/ENCFF513LBB/@@download/ENCFF513LBB.bigBed GRCh38 released antibody characterized with exemption ENCFF161ZHG bigBed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF050THU 13172868 ENCODE Processing Pipeline 89def0be7b582763f172811cd545af55 https://www.encodeproject.org/files/ENCFF161ZHG/@@download/ENCFF161ZHG.bigBed GRCh38 released antibody characterized with exemption ENCFF261QVO bigBed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF219NYJ 13078822 ENCODE Processing Pipeline d31553fb4f27ff16a798b66d92f2b0b7 https://www.encodeproject.org/files/ENCFF261QVO/@@download/ENCFF261QVO.bigBed GRCh38 released antibody characterized with exemption ENCFF291BVN bed narrowPeak conservative idr thresholded peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF050THU, ENCFF055IDY, ENCFF219NYJ, ENCFF419RSJ 147689 ENCODE Processing Pipeline c6ed80acf524de1d6df8cd7a3a018f86 https://www.encodeproject.org/files/ENCFF291BVN/@@download/ENCFF291BVN.bed.gz GRCh38 released antibody characterized with exemption ENCFF704ZHJ bigBed narrowPeak conservative idr thresholded peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF291BVN 361217 ENCODE Processing Pipeline dbc8b33f9aeb6876f48f3740380186d7 https://www.encodeproject.org/files/ENCFF704ZHJ/@@download/ENCFF704ZHJ.bigBed GRCh38 released antibody characterized with exemption ENCFF019LNU bigBed narrowPeak optimal idr thresholded peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF125UKX 373800 ENCODE Processing Pipeline 9780d0fdc68f7eb10a700de1819a72c4 https://www.encodeproject.org/files/ENCFF019LNU/@@download/ENCFF019LNU.bigBed GRCh38 released antibody characterized with exemption ENCFF125UKX bed narrowPeak optimal idr thresholded peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF050THU, ENCFF055IDY, ENCFF219NYJ, ENCFF419RSJ 155361 ENCODE Processing Pipeline abd5a5861885054af766f7855daa85a7 https://www.encodeproject.org/files/ENCFF125UKX/@@download/ENCFF125UKX.bed.gz GRCh38 released antibody characterized with exemption ENCFF174RZG bigWig signal p-value ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF538ZFY 1139574984 ENCODE Processing Pipeline 484a205d63c06d4b8c9f6c8da2641b58 https://www.encodeproject.org/files/ENCFF174RZG/@@download/ENCFF174RZG.bigWig hg19 released antibody characterized with exemption ENCFF179RWI bigWig signal p-value ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF124AKH, ENCFF203ABR 1116746779 ENCODE Processing Pipeline c778dc64004947b5df5e16f3ee1a6b2d https://www.encodeproject.org/files/ENCFF179RWI/@@download/ENCFF179RWI.bigWig hg19 released antibody characterized with exemption ENCFF262MAQ bigWig signal p-value ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF124AKH, ENCFF203ABR, ENCFF538ZFY 1414991901 ENCODE Processing Pipeline c3083415b54b57840e0b680a67a13ac1 https://www.encodeproject.org/files/ENCFF262MAQ/@@download/ENCFF262MAQ.bigWig hg19 released antibody characterized with exemption ENCFF039QRC bigWig fold change over control ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF538ZFY 846883454 ENCODE Processing Pipeline 1949c6c58b1cc9aa4427cc5285ba35f4 https://www.encodeproject.org/files/ENCFF039QRC/@@download/ENCFF039QRC.bigWig hg19 released antibody characterized with exemption ENCFF277UYF bigWig fold change over control ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF124AKH, ENCFF203ABR 802744323 ENCODE Processing Pipeline fbbd28672674572124757dcc0ccc289c https://www.encodeproject.org/files/ENCFF277UYF/@@download/ENCFF277UYF.bigWig hg19 released antibody characterized with exemption ENCFF817JXD bigWig fold change over control ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF124AKH, ENCFF203ABR, ENCFF538ZFY 1319849484 ENCODE Processing Pipeline e6f2d07884cbb50573e893f21b5a3f14 https://www.encodeproject.org/files/ENCFF817JXD/@@download/ENCFF817JXD.bigWig hg19 released antibody characterized with exemption ENCFF875AMX bed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF538ZFY 6820955 ENCODE Processing Pipeline 904a33bcfe940d634185e76021b4f8d6 https://www.encodeproject.org/files/ENCFF875AMX/@@download/ENCFF875AMX.bed.gz hg19 released antibody characterized with exemption ENCFF663THQ bigBed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF875AMX 13046670 ENCODE Processing Pipeline d6636de407f197753334a9c2aed31828 https://www.encodeproject.org/files/ENCFF663THQ/@@download/ENCFF663THQ.bigBed hg19 released antibody characterized with exemption ENCFF997CJC bed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF124AKH, ENCFF203ABR, ENCFF538ZFY 7086536 ENCODE Processing Pipeline 64f1027829d1592c9ffcf5cea94a1be9 https://www.encodeproject.org/files/ENCFF997CJC/@@download/ENCFF997CJC.bed.gz hg19 released antibody characterized with exemption ENCFF304SPP bed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF124AKH, ENCFF203ABR 6428572 ENCODE Processing Pipeline 1168510cdabab6a56ab45f3b1982502f https://www.encodeproject.org/files/ENCFF304SPP/@@download/ENCFF304SPP.bed.gz hg19 released antibody characterized with exemption ENCFF878SRV bigBed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF304SPP 13260452 ENCODE Processing Pipeline c69faea2e9fd0aa3dfea7388afab1937 https://www.encodeproject.org/files/ENCFF878SRV/@@download/ENCFF878SRV.bigBed hg19 released antibody characterized with exemption ENCFF506UBO bed narrowPeak conservative idr thresholded peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF304SPP, ENCFF875AMX, ENCFF997CJC 127537 ENCODE Processing Pipeline bb6980eeeffde86425a464bbeb4e245f https://www.encodeproject.org/files/ENCFF506UBO/@@download/ENCFF506UBO.bed.gz hg19 released antibody characterized with exemption ENCFF943FWI bigBed narrowPeak peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF997CJC 13008286 ENCODE Processing Pipeline 3a72d18718eb831b45a5f24e27de560a https://www.encodeproject.org/files/ENCFF943FWI/@@download/ENCFF943FWI.bigBed hg19 released antibody characterized with exemption ENCFF073CIJ bigBed narrowPeak optimal idr thresholded peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF910GER 280542 ENCODE Processing Pipeline abf007a8e9ef446e076d7432c734f2d3 https://www.encodeproject.org/files/ENCFF073CIJ/@@download/ENCFF073CIJ.bigBed hg19 released antibody characterized with exemption ENCFF910GER bed narrowPeak optimal idr thresholded peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF304SPP, ENCFF875AMX, ENCFF997CJC 130841 ENCODE Processing Pipeline 9022ac929144e3b4ede8397e3c3495ba https://www.encodeproject.org/files/ENCFF910GER/@@download/ENCFF910GER.bed.gz hg19 released antibody characterized with exemption ENCFF765WBW bigBed narrowPeak conservative idr thresholded peaks ENCSR823ADL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RFXANK-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF506UBO 275757 ENCODE Processing Pipeline 0284e8c1e042c1adfdd5fa6758c2ad39 https://www.encodeproject.org/files/ENCFF765WBW/@@download/ENCFF765WBW.bigBed hg19 released antibody characterized with exemption ENCFF000PDN bam alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PDZ 359007322 Richard Myers, HAIB e640db7f656105c1c6d3aa6e25431abf https://www.encodeproject.org/files/ENCFF000PDN/@@download/ENCFF000PDN.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDO bigBed broadPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UEU 158808 Richard Myers, HAIB 3c52c1a936620a96d3e342020c10f711 https://www.encodeproject.org/files/ENCFF000PDO/@@download/ENCFF000PDO.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDP bigBed broadPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UEV 86453 Richard Myers, HAIB 7a414dcaa17cd471e7587957dff9519e https://www.encodeproject.org/files/ENCFF000PDP/@@download/ENCFF000PDP.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDR bam alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PEC 1131802327 Richard Myers, HAIB 2462916fba9e70e6e47e1ff46616867f https://www.encodeproject.org/files/ENCFF000PDR/@@download/ENCFF000PDR.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDS bigWig raw signal ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 7515446 Richard Myers, HAIB b68b1802c52a1421944137d428c4dae8 https://www.encodeproject.org/files/ENCFF000PDS/@@download/ENCFF000PDS.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDU bigWig raw signal ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 4232936 Richard Myers, HAIB 7e759725dc4ab254cfc7d2eae5e63286 https://www.encodeproject.org/files/ENCFF000PDU/@@download/ENCFF000PDU.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PDZ fastq reads ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 399132757 Richard Myers, HAIB 27af921eb327e9d9c71c73ca85f16f8a https://www.encodeproject.org/files/ENCFF000PDZ/@@download/ENCFF000PDZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PBO/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000PEC fastq reads ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 955602668 Richard Myers, HAIB 7c1eac6575f5aedde8cdf33f62e03ccb https://www.encodeproject.org/files/ENCFF000PEC/@@download/ENCFF000PEC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000PBO/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UEU bed broadPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 69179 Richard Myers, HAIB ff21d33126eae9e2d9f6aa5cadc17bc7 https://www.encodeproject.org/files/ENCFF001UEU/@@download/ENCFF001UEU.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UEV bed broadPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 25514 Richard Myers, HAIB 88e21a37955d51ed39adf31ed35525f8 https://www.encodeproject.org/files/ENCFF001UEV/@@download/ENCFF001UEV.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF002CJW bed narrowPeak optimal idr thresholded peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 91510 ENCODE Consortium Analysis Working Group be6f4db63d4c847ba0e4002c942f8acf https://www.encodeproject.org/files/ENCFF002CJW/@@download/ENCFF002CJW.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF722IPL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE ENCFF002CJW 236159 ENCODE Consortium c2e6695331377ae5f6cf6ec93bd0605a https://www.encodeproject.org/files/ENCFF722IPL/@@download/ENCFF722IPL.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF226FQN bam unfiltered alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PDZ, ENCFF643CGH 447744915 ENCODE Processing Pipeline b8fa8e4afea869e6752f86a87c428dae https://www.encodeproject.org/files/ENCFF226FQN/@@download/ENCFF226FQN.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF131WPU bam alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PDZ, ENCFF643CGH 160142741 ENCODE Processing Pipeline 8f6d9cdefadf22839e3df9f36cb6930d https://www.encodeproject.org/files/ENCFF131WPU/@@download/ENCFF131WPU.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF843UFJ bam unfiltered alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEC, ENCFF643CGH 1326163068 ENCODE Processing Pipeline 4ab216f6bfd1895f1e35a59e31d5eaef https://www.encodeproject.org/files/ENCFF843UFJ/@@download/ENCFF843UFJ.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF015UAQ bam alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEC, ENCFF643CGH 815179651 ENCODE Processing Pipeline a9652dd7768711ed38764d30aa2e12c1 https://www.encodeproject.org/files/ENCFF015UAQ/@@download/ENCFF015UAQ.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF623YRN bam unfiltered alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PDZ, ENCFF807MUK 446725989 ENCODE Processing Pipeline 2e8ffa7379441c48026ad5da868914e2 https://www.encodeproject.org/files/ENCFF623YRN/@@download/ENCFF623YRN.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF733LNR bam alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PDZ, ENCFF807MUK 160191423 ENCODE Processing Pipeline f2c3e294735b8483e9a9d5d08712a483 https://www.encodeproject.org/files/ENCFF733LNR/@@download/ENCFF733LNR.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF666YXP bam unfiltered alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEC, ENCFF807MUK 1322938485 ENCODE Processing Pipeline f98f3ccaf1b65e5f1f6e0e78ac756f04 https://www.encodeproject.org/files/ENCFF666YXP/@@download/ENCFF666YXP.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF494HTR bam alignments ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PEC, ENCFF807MUK 815162750 ENCODE Processing Pipeline dd7622854da82ae8fdd48404a0229423 https://www.encodeproject.org/files/ENCFF494HTR/@@download/ENCFF494HTR.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF563TDX bigWig signal p-value ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015UAQ, ENCFF131WPU, ENCFF769ESE 504148041 ENCODE Processing Pipeline b1a8570ad7dc748adc68c17178e9918f https://www.encodeproject.org/files/ENCFF563TDX/@@download/ENCFF563TDX.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF971KBG bigWig signal p-value ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015UAQ, ENCFF769ESE 454629295 ENCODE Processing Pipeline 9db7c03124b01cd68da408e587a45cf9 https://www.encodeproject.org/files/ENCFF971KBG/@@download/ENCFF971KBG.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF828HJD bigWig fold change over control ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF131WPU, ENCFF769ESE 100574638 ENCODE Processing Pipeline e839640c28dc0894ec16ec3d8506d9a2 https://www.encodeproject.org/files/ENCFF828HJD/@@download/ENCFF828HJD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF552GAY bigWig signal p-value ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF131WPU, ENCFF769ESE 344355947 ENCODE Processing Pipeline d1829e9fbb0e341dee902ae674832206 https://www.encodeproject.org/files/ENCFF552GAY/@@download/ENCFF552GAY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF455IZJ bigWig fold change over control ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015UAQ, ENCFF769ESE 407911343 ENCODE Processing Pipeline 15afbc1034ca39a70dda8ba25c87186f https://www.encodeproject.org/files/ENCFF455IZJ/@@download/ENCFF455IZJ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF616IIZ bigWig fold change over control ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015UAQ, ENCFF131WPU, ENCFF769ESE 475314349 ENCODE Processing Pipeline ced6a23538a96a929db856fb85e72074 https://www.encodeproject.org/files/ENCFF616IIZ/@@download/ENCFF616IIZ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF943VPI bed narrowPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015UAQ, ENCFF769ESE 4644489 ENCODE Processing Pipeline 5fa3e86dabbb4b63614a96f231450e20 https://www.encodeproject.org/files/ENCFF943VPI/@@download/ENCFF943VPI.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF967SEI bed narrowPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF131WPU, ENCFF769ESE 1448575 ENCODE Processing Pipeline 53c50d35221bd90521bb2c224a104182 https://www.encodeproject.org/files/ENCFF967SEI/@@download/ENCFF967SEI.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF653TUI bed narrowPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF015UAQ, ENCFF131WPU, ENCFF769ESE 4792921 ENCODE Processing Pipeline 52c097a08bb769d5d2c3b2ab69dbe14c https://www.encodeproject.org/files/ENCFF653TUI/@@download/ENCFF653TUI.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF096VKY bigBed narrowPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF943VPI 10919768 ENCODE Processing Pipeline 03448a687ee55087b3465e95cc438c5f https://www.encodeproject.org/files/ENCFF096VKY/@@download/ENCFF096VKY.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF731JES bigBed narrowPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF967SEI 2726558 ENCODE Processing Pipeline 6909ac701fd16b9dbd6e170fc108bf82 https://www.encodeproject.org/files/ENCFF731JES/@@download/ENCFF731JES.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF538TRP bigBed narrowPeak peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF653TUI 11140255 ENCODE Processing Pipeline cda2a1465b97c3fca0419c0ee3da1822 https://www.encodeproject.org/files/ENCFF538TRP/@@download/ENCFF538TRP.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF795HVQ bed narrowPeak conservative idr thresholded peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF653TUI, ENCFF943VPI, ENCFF967SEI 38148 ENCODE Processing Pipeline 2119e3c589989ef0cc0f408fa411a800 https://www.encodeproject.org/files/ENCFF795HVQ/@@download/ENCFF795HVQ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF628NCC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF795HVQ 103888 ENCODE Processing Pipeline ef4056519c7bcf566d208e75f421a20c https://www.encodeproject.org/files/ENCFF628NCC/@@download/ENCFF628NCC.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF422MCZ bed narrowPeak optimal idr thresholded peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF653TUI, ENCFF943VPI, ENCFF967SEI 101619 ENCODE Processing Pipeline 1c06e137ec89274abed357b4111db70a https://www.encodeproject.org/files/ENCFF422MCZ/@@download/ENCFF422MCZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF791QBG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNY ChIP-seq EFO:0002824 HCT116 immortalized cell line adult male unknown Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF422MCZ 214817 ENCODE Processing Pipeline 2cb9cc0b1fbaac3bcf6fa4c84407dedf https://www.encodeproject.org/files/ENCFF791QBG/@@download/ENCFF791QBG.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF302XOK fastq reads ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1065073048 Richard Myers, HAIB 0d0073273e0b190f9dc49d5943238338 SRA:SRR5339013 https://www.encodeproject.org/files/ENCFF302XOK/@@download/ENCFF302XOK.fastq.gz HiSeq 2000 /files/ENCFF086CFB/ released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF500ZBE fastq reads ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 1 50 single-ended 2451222012 Richard Myers, HAIB d991783529600b0044d00c5b3887a46a SRA:SRR5339012 https://www.encodeproject.org/files/ENCFF500ZBE/@@download/ENCFF500ZBE.fastq.gz HiSeq 2000 /files/ENCFF123QZN/ released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF149IEV bigWig signal p-value ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF200LFK, ENCFF321UJV, ENCFF689YYU 781857588 ENCODE Processing Pipeline 0b436db3e05f93963c587e902379eef6 https://www.encodeproject.org/files/ENCFF149IEV/@@download/ENCFF149IEV.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF863AIF bigWig fold change over control ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF200LFK, ENCFF321UJV, ENCFF689YYU 565052758 ENCODE Processing Pipeline 40ae1087ec290f6dd5749e7c27f792de https://www.encodeproject.org/files/ENCFF863AIF/@@download/ENCFF863AIF.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF677IWP bam unfiltered alignments ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 50 ENCFF302XOK, ENCFF643CGH 1073669279 ENCODE Processing Pipeline 746626417bafe7ecf8f3a5f3781b99ed https://www.encodeproject.org/files/ENCFF677IWP/@@download/ENCFF677IWP.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF479OYS bam alignments ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 50 ENCFF302XOK, ENCFF643CGH 775048073 ENCODE Processing Pipeline 228e02bb79f58d8612720e86e2d2b8a2 https://www.encodeproject.org/files/ENCFF479OYS/@@download/ENCFF479OYS.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF002OXS bam unfiltered alignments ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 50 ENCFF500ZBE, ENCFF643CGH 2515205787 ENCODE Processing Pipeline aa9664fb391b5bbab3154ae5b658ed8d https://www.encodeproject.org/files/ENCFF002OXS/@@download/ENCFF002OXS.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF864EDI bam alignments ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 50 ENCFF500ZBE, ENCFF643CGH 1800291274 ENCODE Processing Pipeline 9cd3b255135efbcebd34416af015983a https://www.encodeproject.org/files/ENCFF864EDI/@@download/ENCFF864EDI.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF355OWJ bigWig signal p-value ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF337WHA, ENCFF479OYS, ENCFF610PNU 841488168 ENCODE Processing Pipeline 236a741e22c3fd603894f2e0446a571c https://www.encodeproject.org/files/ENCFF355OWJ/@@download/ENCFF355OWJ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF883GDO bigWig signal p-value ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF337WHA, ENCFF610PNU, ENCFF864EDI 1123744508 ENCODE Processing Pipeline 1f9ea646fd7560a2952c5a4ec19e2814 https://www.encodeproject.org/files/ENCFF883GDO/@@download/ENCFF883GDO.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF323HQX bigWig fold change over control ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF337WHA, ENCFF479OYS, ENCFF610PNU 563425116 ENCODE Processing Pipeline e880ada6b1046907c8e6fc08fc26922e https://www.encodeproject.org/files/ENCFF323HQX/@@download/ENCFF323HQX.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF959JEM bigWig signal p-value ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF337WHA, ENCFF479OYS, ENCFF610PNU, ENCFF864EDI 1265541723 ENCODE Processing Pipeline c6913581fd17935ce124cb95bc7628a9 https://www.encodeproject.org/files/ENCFF959JEM/@@download/ENCFF959JEM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF574JFC bigWig fold change over control ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF337WHA, ENCFF610PNU, ENCFF864EDI 1066121519 ENCODE Processing Pipeline 3c911c4d75238278f66b2485f04fb624 https://www.encodeproject.org/files/ENCFF574JFC/@@download/ENCFF574JFC.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF419EMP bigWig fold change over control ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF337WHA, ENCFF479OYS, ENCFF610PNU, ENCFF864EDI 1282952440 ENCODE Processing Pipeline df3a555b33778ca5e293ce9734c04e55 https://www.encodeproject.org/files/ENCFF419EMP/@@download/ENCFF419EMP.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF027LSP bed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF337WHA, ENCFF479OYS, ENCFF610PNU 5979172 ENCODE Processing Pipeline 5814403de402fb66c36d8831573bedd6 https://www.encodeproject.org/files/ENCFF027LSP/@@download/ENCFF027LSP.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF892FWF bed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF337WHA, ENCFF479OYS, ENCFF610PNU, ENCFF864EDI 6675335 ENCODE Processing Pipeline 1ea9c6d8c89ce35ae2c1a3ec29b69c1f https://www.encodeproject.org/files/ENCFF892FWF/@@download/ENCFF892FWF.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF307CSN bed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF337WHA, ENCFF610PNU, ENCFF864EDI 6384949 ENCODE Processing Pipeline a34181cfa400624e56dace643d3c5277 https://www.encodeproject.org/files/ENCFF307CSN/@@download/ENCFF307CSN.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF905JAC bed narrowPeak optimal idr thresholded peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF027LSP, ENCFF307CSN, ENCFF419RSJ, ENCFF892FWF 1266306 ENCODE Processing Pipeline 023554e312653b4314e473239bbe8dc7 https://www.encodeproject.org/files/ENCFF905JAC/@@download/ENCFF905JAC.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF624DNS bigBed narrowPeak optimal idr thresholded peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF905JAC 2293868 ENCODE Processing Pipeline 8fab22680eebfecd416b9d89142c7646 https://www.encodeproject.org/files/ENCFF624DNS/@@download/ENCFF624DNS.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF678KAD bigBed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF892FWF 13826222 ENCODE Processing Pipeline a11881b995137661d17f0e7f32717a76 https://www.encodeproject.org/files/ENCFF678KAD/@@download/ENCFF678KAD.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF684UQP bigBed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF027LSP 13377080 ENCODE Processing Pipeline d809c7f5fbf5674ae5869ca069f1858f https://www.encodeproject.org/files/ENCFF684UQP/@@download/ENCFF684UQP.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF222OGB bigBed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF307CSN 13789633 ENCODE Processing Pipeline edced8a460951a444f4babc4c28decb6 https://www.encodeproject.org/files/ENCFF222OGB/@@download/ENCFF222OGB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF102LQR bam unfiltered alignments ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 50 ENCFF302XOK, ENCFF807MUK 1070074733 ENCODE Processing Pipeline e5af964d5981031e8254867919637212 https://www.encodeproject.org/files/ENCFF102LQR/@@download/ENCFF102LQR.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF689YYU bam alignments ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 50 ENCFF302XOK, ENCFF807MUK 775248669 ENCODE Processing Pipeline 6421c4ffd3327df3608bb8f8e2aeaf1e https://www.encodeproject.org/files/ENCFF689YYU/@@download/ENCFF689YYU.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF014GDD bam unfiltered alignments ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 50 ENCFF500ZBE, ENCFF807MUK 2503850416 ENCODE Processing Pipeline 88b8e6ae836f5231d9fcc9c93a68927b https://www.encodeproject.org/files/ENCFF014GDD/@@download/ENCFF014GDD.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF295XEM bam alignments ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 50 ENCFF500ZBE, ENCFF807MUK 1800239622 ENCODE Processing Pipeline bc38c210846c98df14e31ed8b66819a6 https://www.encodeproject.org/files/ENCFF295XEM/@@download/ENCFF295XEM.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF611JQN bigWig signal p-value ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF200LFK, ENCFF295XEM, ENCFF321UJV 1145057349 ENCODE Processing Pipeline 452715e31a3c8301171ce339fa052921 https://www.encodeproject.org/files/ENCFF611JQN/@@download/ENCFF611JQN.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF561NYC bigWig fold change over control ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF200LFK, ENCFF295XEM, ENCFF321UJV 1028817929 ENCODE Processing Pipeline 926b80db8263de8ab3162edbc60b6ea6 https://www.encodeproject.org/files/ENCFF561NYC/@@download/ENCFF561NYC.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF280GOT bigWig signal p-value ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF200LFK, ENCFF295XEM, ENCFF321UJV, ENCFF689YYU 1264836462 ENCODE Processing Pipeline 973a617ec9a5e2870496de1201196565 https://www.encodeproject.org/files/ENCFF280GOT/@@download/ENCFF280GOT.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF022XIX bed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF200LFK, ENCFF295XEM, ENCFF321UJV 6385906 ENCODE Processing Pipeline 408cc21c088095523b2496686055c974 https://www.encodeproject.org/files/ENCFF022XIX/@@download/ENCFF022XIX.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF105WKB bigBed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF240XXW 13807639 ENCODE Processing Pipeline 5febc2806e7658774673c5f67e53c74e https://www.encodeproject.org/files/ENCFF105WKB/@@download/ENCFF105WKB.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF957ICB bed narrowPeak conservative idr thresholded peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF022XIX, ENCFF240XXW, ENCFF839MCU 1263017 ENCODE Processing Pipeline 840dc2afdac5b08153d01809a52a89bb https://www.encodeproject.org/files/ENCFF957ICB/@@download/ENCFF957ICB.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF053HXL bigBed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF839MCU 13365966 ENCODE Processing Pipeline caee1a96ffb18853168a0f8389ee7ad7 https://www.encodeproject.org/files/ENCFF053HXL/@@download/ENCFF053HXL.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF713MCF bed narrowPeak optimal idr thresholded peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF022XIX, ENCFF240XXW, ENCFF839MCU 1254968 ENCODE Processing Pipeline 2054296572380b63d6dedec1cf356f04 https://www.encodeproject.org/files/ENCFF713MCF/@@download/ENCFF713MCF.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF240XXW bed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF200LFK, ENCFF295XEM, ENCFF321UJV, ENCFF689YYU 6667890 ENCODE Processing Pipeline 65283874771ddb453e822654f77af35f https://www.encodeproject.org/files/ENCFF240XXW/@@download/ENCFF240XXW.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF294LYA bigBed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF022XIX 13784781 ENCODE Processing Pipeline 73d3de2e688a7ab78b262dbdcd8587f3 https://www.encodeproject.org/files/ENCFF294LYA/@@download/ENCFF294LYA.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF818TPI bigWig fold change over control ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF200LFK, ENCFF295XEM, ENCFF321UJV, ENCFF689YYU 1285039209 ENCODE Processing Pipeline b0f35b35360d87b4bbbb2f8b9a0df791 https://www.encodeproject.org/files/ENCFF818TPI/@@download/ENCFF818TPI.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF839MCU bed narrowPeak peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF200LFK, ENCFF321UJV, ENCFF689YYU 5980828 ENCODE Processing Pipeline c861ae9a61a819a72c11b296796dff7a https://www.encodeproject.org/files/ENCFF839MCU/@@download/ENCFF839MCU.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF388ALA bigBed narrowPeak optimal idr thresholded peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF713MCF 2272655 ENCODE Processing Pipeline 8988961c1d2d44ef4b18dcc017632a83 https://www.encodeproject.org/files/ENCFF388ALA/@@download/ENCFF388ALA.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF952CYX bigBed narrowPeak conservative idr thresholded peaks ENCSR601OGE ChIP-seq UBERON:0002107 liver tissue adult male 32 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF957ICB 2286608 ENCODE Processing Pipeline 5d79a2f51dd92915ef9715fadc032b1f https://www.encodeproject.org/files/ENCFF952CYX/@@download/ENCFF952CYX.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001RUL fastq reads ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1642869457 Richard Myers, HAIB 834b82fbdae742cd8680e7be69c41165 SRA:SRR5331594 https://www.encodeproject.org/files/ENCFF001RUL/@@download/ENCFF001RUL.fastq.gz HiSeq 2000 /files/ENCFF001RVQ/ released antibody characterized with exemption ENCFF001RUM fastq reads ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1959742577 Richard Myers, HAIB 4e63d60d143676d771333502004d6de9 SRA:SRR5331595 https://www.encodeproject.org/files/ENCFF001RUM/@@download/ENCFF001RUM.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption ENCFF820SNZ bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF001RUL, ENCFF807MUK 1313528763 ENCODE Processing Pipeline 2366d44c8ad24b78b9a850b4428fd12a https://www.encodeproject.org/files/ENCFF820SNZ/@@download/ENCFF820SNZ.bam hg19 released antibody characterized with exemption ENCFF641CKM bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF001RUM, ENCFF807MUK 1401989953 ENCODE Processing Pipeline c943b52a7295a776d066dda48a57effc https://www.encodeproject.org/files/ENCFF641CKM/@@download/ENCFF641CKM.bam hg19 released antibody characterized with exemption ENCFF674QBG bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF701AOA 787268136 ENCODE Processing Pipeline 2cc1ea74fbe8f1d2f0885d8d273054e8 https://www.encodeproject.org/files/ENCFF674QBG/@@download/ENCFF674QBG.bigWig hg19 released antibody characterized with exemption ENCFF382IWI bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF701AOA 622083962 ENCODE Processing Pipeline e0b3ddbf45d6d9f8fc73255e51db224b https://www.encodeproject.org/files/ENCFF382IWI/@@download/ENCFF382IWI.bigWig hg19 released antibody characterized with exemption ENCFF895SOZ bam unfiltered alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUM, ENCFF643CGH 1997203362 ENCODE Processing Pipeline 426064d8689e2740dbec39db15da86a9 https://www.encodeproject.org/files/ENCFF895SOZ/@@download/ENCFF895SOZ.bam GRCh38 released antibody characterized with exemption ENCFF889IJX bam unfiltered alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUL, ENCFF643CGH 1752393099 ENCODE Processing Pipeline 02fe68de6f6641af1a1d54ab4d43a087 https://www.encodeproject.org/files/ENCFF889IJX/@@download/ENCFF889IJX.bam GRCh38 released antibody characterized with exemption ENCFF412DRO bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUM, ENCFF643CGH 1401333874 ENCODE Processing Pipeline ef9ef6bc208e78dd1e72f74101d4e9ca https://www.encodeproject.org/files/ENCFF412DRO/@@download/ENCFF412DRO.bam GRCh38 released antibody characterized with exemption ENCFF033UID bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUL, ENCFF643CGH 1313034347 ENCODE Processing Pipeline bd34b869ee9a1699ed68552245fe3a0b https://www.encodeproject.org/files/ENCFF033UID/@@download/ENCFF033UID.bam GRCh38 released antibody characterized with exemption ENCFF016LUR bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033UID, ENCFF505ZUJ 625666621 ENCODE Processing Pipeline 2d2898074280aa5f4550e852d7780e6c https://www.encodeproject.org/files/ENCFF016LUR/@@download/ENCFF016LUR.bigWig GRCh38 released antibody characterized with exemption ENCFF977VWN bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033UID, ENCFF332SVJ, ENCFF412DRO, ENCFF505ZUJ 1356362507 ENCODE Processing Pipeline 1b65bea3c1628e96003a28e5bc2ea70f https://www.encodeproject.org/files/ENCFF977VWN/@@download/ENCFF977VWN.bigWig GRCh38 released antibody characterized with exemption ENCFF392MIK bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF412DRO 752535303 ENCODE Processing Pipeline 931979369c264eb21a5ddb5b0b2cc4fd https://www.encodeproject.org/files/ENCFF392MIK/@@download/ENCFF392MIK.bigWig GRCh38 released antibody characterized with exemption ENCFF935NYZ bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033UID, ENCFF505ZUJ 558508108 ENCODE Processing Pipeline 87de8698419566a32949ba2eefa428e4 https://www.encodeproject.org/files/ENCFF935NYZ/@@download/ENCFF935NYZ.bigWig GRCh38 released antibody characterized with exemption ENCFF707MLG bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF412DRO 618791382 ENCODE Processing Pipeline 047c9e3212a8dd2527cab1da4fb5ce4d https://www.encodeproject.org/files/ENCFF707MLG/@@download/ENCFF707MLG.bigWig GRCh38 released antibody characterized with exemption ENCFF059XSX bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033UID, ENCFF332SVJ, ENCFF412DRO, ENCFF505ZUJ 1270257100 ENCODE Processing Pipeline 925b8e57ca2499b9299228b3392df726 https://www.encodeproject.org/files/ENCFF059XSX/@@download/ENCFF059XSX.bigWig GRCh38 released antibody characterized with exemption ENCFF387MDX bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033UID, ENCFF332SVJ, ENCFF412DRO, ENCFF505ZUJ 7184179 ENCODE Processing Pipeline 3fd2a3ed842a80455970f014fbf56c10 https://www.encodeproject.org/files/ENCFF387MDX/@@download/ENCFF387MDX.bed.gz GRCh38 released antibody characterized with exemption ENCFF719NDZ bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF904ELN 12819286 ENCODE Processing Pipeline f99113c4ebb463232d40e66d730bd7c7 https://www.encodeproject.org/files/ENCFF719NDZ/@@download/ENCFF719NDZ.bigBed GRCh38 released antibody characterized with exemption ENCFF284GKR bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF387MDX 12863754 ENCODE Processing Pipeline 1bc407f34e41b218a66903aee311c329 https://www.encodeproject.org/files/ENCFF284GKR/@@download/ENCFF284GKR.bigBed GRCh38 released antibody characterized with exemption ENCFF610YNO bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033UID, ENCFF505ZUJ 6394031 ENCODE Processing Pipeline bcf49f2753707148c025f7cd24f8f2a2 https://www.encodeproject.org/files/ENCFF610YNO/@@download/ENCFF610YNO.bed.gz GRCh38 released antibody characterized with exemption ENCFF904ELN bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF412DRO 6800130 ENCODE Processing Pipeline 390ee1ca8c1ea1096b445e6e99f9980b https://www.encodeproject.org/files/ENCFF904ELN/@@download/ENCFF904ELN.bed.gz GRCh38 released antibody characterized with exemption ENCFF201YMA bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF610YNO 13057783 ENCODE Processing Pipeline 7bf9bef4b622cce389580a33cfc7cf4c https://www.encodeproject.org/files/ENCFF201YMA/@@download/ENCFF201YMA.bigBed GRCh38 released antibody characterized with exemption ENCFF782OUZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF548ITQ 786201 ENCODE Processing Pipeline 24661e5f422f2a4a931b5eadf660d7e6 https://www.encodeproject.org/files/ENCFF782OUZ/@@download/ENCFF782OUZ.bigBed GRCh38 released antibody characterized with exemption ENCFF548ITQ bed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF387MDX, ENCFF419RSJ, ENCFF610YNO, ENCFF904ELN 300978 ENCODE Processing Pipeline b9119c3ba9d91361e3b906e073ad32e3 https://www.encodeproject.org/files/ENCFF548ITQ/@@download/ENCFF548ITQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF573ZWL bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF069AAY 966144 ENCODE Processing Pipeline 05012f3d4f0ebbe24af189f307871a2c https://www.encodeproject.org/files/ENCFF573ZWL/@@download/ENCFF573ZWL.bigBed GRCh38 released antibody characterized with exemption ENCFF069AAY bed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF387MDX, ENCFF419RSJ, ENCFF610YNO, ENCFF904ELN 400019 ENCODE Processing Pipeline 4fae0f8dac0d78ddbd10368544c7f6a5 https://www.encodeproject.org/files/ENCFF069AAY/@@download/ENCFF069AAY.bed.gz GRCh38 released antibody characterized with exemption ENCFF701AOA bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUM, ENCFF807MUK 1401989981 ENCODE Processing Pipeline 886396e42d2767db9bd6c9e97183179e https://www.encodeproject.org/files/ENCFF701AOA/@@download/ENCFF701AOA.bam hg19 released antibody characterized with exemption ENCFF892AIU bam unfiltered alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUM, ENCFF807MUK 1996110281 ENCODE Processing Pipeline 1878afb148745ccb48dfd8d3658090af https://www.encodeproject.org/files/ENCFF892AIU/@@download/ENCFF892AIU.bam hg19 released antibody characterized with exemption ENCFF877BNT bam unfiltered alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUL, ENCFF807MUK 1750014544 ENCODE Processing Pipeline fd2ad31c91540d62f0fd19fe8a463849 https://www.encodeproject.org/files/ENCFF877BNT/@@download/ENCFF877BNT.bam hg19 released antibody characterized with exemption ENCFF310TZE bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUL, ENCFF807MUK 1313528791 ENCODE Processing Pipeline 0a2369d3a599e39d68ebd1a687712382 https://www.encodeproject.org/files/ENCFF310TZE/@@download/ENCFF310TZE.bam hg19 released antibody characterized with exemption ENCFF254EUL bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF310TZE, ENCFF747SPK 685692749 ENCODE Processing Pipeline 0b2cd8dbec0761a2db79379beea16209 https://www.encodeproject.org/files/ENCFF254EUL/@@download/ENCFF254EUL.bigWig hg19 released antibody characterized with exemption ENCFF177KXS bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF310TZE, ENCFF747SPK 554899467 ENCODE Processing Pipeline 58b29c363adced03e69daca59be92e85 https://www.encodeproject.org/files/ENCFF177KXS/@@download/ENCFF177KXS.bigWig hg19 released antibody characterized with exemption ENCFF235RTU bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF310TZE, ENCFF701AOA, ENCFF747SPK 1272334142 ENCODE Processing Pipeline d77fa00a35e579565dcb218da6c8a719 https://www.encodeproject.org/files/ENCFF235RTU/@@download/ENCFF235RTU.bigWig hg19 released antibody characterized with exemption ENCFF965ONO bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF131YKB 13039717 ENCODE Processing Pipeline b20f967a96986846abdcde29135bdba9 https://www.encodeproject.org/files/ENCFF965ONO/@@download/ENCFF965ONO.bigBed hg19 released antibody characterized with exemption ENCFF842BNK bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF875TQG 12811998 ENCODE Processing Pipeline 6705b73e7ba39165a3eccbf3d0a3f892 https://www.encodeproject.org/files/ENCFF842BNK/@@download/ENCFF842BNK.bigBed hg19 released antibody characterized with exemption ENCFF410JJC bed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF131YKB, ENCFF235FTG, ENCFF875TQG 299981 ENCODE Processing Pipeline 994f8104a748fbc318af07ff06bd751c https://www.encodeproject.org/files/ENCFF410JJC/@@download/ENCFF410JJC.bed.gz hg19 released antibody characterized with exemption ENCFF131YKB bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF310TZE, ENCFF747SPK 6404445 ENCODE Processing Pipeline ce527a6d51afbb56bee2e1ff7aa357bf https://www.encodeproject.org/files/ENCFF131YKB/@@download/ENCFF131YKB.bed.gz hg19 released antibody characterized with exemption ENCFF875TQG bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF701AOA 6802573 ENCODE Processing Pipeline 51bb4cfa7573995a9a30f2d4d51524c1 https://www.encodeproject.org/files/ENCFF875TQG/@@download/ENCFF875TQG.bed.gz hg19 released antibody characterized with exemption ENCFF079EFI bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF178MOP 963963 ENCODE Processing Pipeline d62a0aaef6139d4594c8b1fbb30f8907 https://www.encodeproject.org/files/ENCFF079EFI/@@download/ENCFF079EFI.bigBed hg19 released antibody characterized with exemption ENCFF166SEG bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF310TZE, ENCFF701AOA, ENCFF747SPK 1225888351 ENCODE Processing Pipeline 4d14bf7e2aa45fedb63d9a8775861172 https://www.encodeproject.org/files/ENCFF166SEG/@@download/ENCFF166SEG.bigWig hg19 released antibody characterized with exemption ENCFF751OGO bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF235FTG 12855971 ENCODE Processing Pipeline 29a24805491c7190438e891408717912 https://www.encodeproject.org/files/ENCFF751OGO/@@download/ENCFF751OGO.bigBed hg19 released antibody characterized with exemption ENCFF235FTG bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF310TZE, ENCFF701AOA, ENCFF747SPK 7184972 ENCODE Processing Pipeline ebea0ab3ee602810ee67f0f4c8e5709b https://www.encodeproject.org/files/ENCFF235FTG/@@download/ENCFF235FTG.bed.gz hg19 released antibody characterized with exemption ENCFF163TFW bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF410JJC 782926 ENCODE Processing Pipeline b2a3e3af765ee5ee6a5a99192c2d9ba4 https://www.encodeproject.org/files/ENCFF163TFW/@@download/ENCFF163TFW.bigBed hg19 released antibody characterized with exemption ENCFF178MOP bed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF131YKB, ENCFF235FTG, ENCFF875TQG 398842 ENCODE Processing Pipeline 8793c337b4cbb250f1ea3226f4282427 https://www.encodeproject.org/files/ENCFF178MOP/@@download/ENCFF178MOP.bed.gz hg19 released antibody characterized with exemption ENCFF435TOG fastq reads ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 1 50 single-ended 1494953897 Richard Myers, HAIB 79de8cdd48748c4ecdc4674de263dda0 SRA:SRR5338912 https://www.encodeproject.org/files/ENCFF435TOG/@@download/ENCFF435TOG.fastq.gz HiSeq 2000 /files/ENCFF805GCU/ released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF366KUG fastq reads ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 1 50 single-ended 1173947745 Richard Myers, HAIB b7c21d795409589cfa7b66fd55603469 SRA:SRR5338913 https://www.encodeproject.org/files/ENCFF366KUG/@@download/ENCFF366KUG.fastq.gz HiSeq 2000 /files/ENCFF929JYK/ released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF927UXE bigWig signal p-value ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF924XUU 684444938 ENCODE Processing Pipeline 93acf3678d0dcf91874d3f5d4707403f https://www.encodeproject.org/files/ENCFF927UXE/@@download/ENCFF927UXE.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF475HAH bigWig fold change over control ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF924XUU 442139111 ENCODE Processing Pipeline bdd6ca33bd436b85ef92dfa6f6240e32 https://www.encodeproject.org/files/ENCFF475HAH/@@download/ENCFF475HAH.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF417XGQ bam unfiltered alignments ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 50 ENCFF435TOG, ENCFF643CGH 1531373682 ENCODE Processing Pipeline a9f55ef5365d6a165b71d40abf2895b2 https://www.encodeproject.org/files/ENCFF417XGQ/@@download/ENCFF417XGQ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF172NQP bam unfiltered alignments ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 50 ENCFF366KUG, ENCFF643CGH 1179823949 ENCODE Processing Pipeline d6a4da2abca30b1a928a7244cabd59be https://www.encodeproject.org/files/ENCFF172NQP/@@download/ENCFF172NQP.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF058OZQ bam alignments ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 50 ENCFF366KUG, ENCFF643CGH 841836651 ENCODE Processing Pipeline ac34dce2e14b2e0341af40eaa185af01 https://www.encodeproject.org/files/ENCFF058OZQ/@@download/ENCFF058OZQ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF658AIS bam alignments ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 50 ENCFF435TOG, ENCFF643CGH 1101997075 ENCODE Processing Pipeline fddae2efea2e038c6232cad24b341a3a https://www.encodeproject.org/files/ENCFF658AIS/@@download/ENCFF658AIS.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF309PIL bigWig signal p-value ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF658AIS 615903256 ENCODE Processing Pipeline 60de38315df3b3cf99ef324e47937095 https://www.encodeproject.org/files/ENCFF309PIL/@@download/ENCFF309PIL.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF893AYJ bigWig signal p-value ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF058OZQ, ENCFF406XEH 642931257 ENCODE Processing Pipeline 1b055acd1dac968e7465a3d7b523891e https://www.encodeproject.org/files/ENCFF893AYJ/@@download/ENCFF893AYJ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF770KHN bigWig fold change over control ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF658AIS 609995950 ENCODE Processing Pipeline 075c2aef00211799b3c1a0a01407672b https://www.encodeproject.org/files/ENCFF770KHN/@@download/ENCFF770KHN.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF179EEK bigWig signal p-value ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF058OZQ, ENCFF370PSF, ENCFF406XEH, ENCFF658AIS 1051019986 ENCODE Processing Pipeline 32e726568b3500a46694a851305d7f07 https://www.encodeproject.org/files/ENCFF179EEK/@@download/ENCFF179EEK.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF838TLG bigWig fold change over control ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF058OZQ, ENCFF406XEH 440295925 ENCODE Processing Pipeline b4a14d3e3d91c07b5d17775c29a75eb7 https://www.encodeproject.org/files/ENCFF838TLG/@@download/ENCFF838TLG.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF352PXN bigWig fold change over control ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF058OZQ, ENCFF370PSF, ENCFF406XEH, ENCFF658AIS 1107416513 ENCODE Processing Pipeline f37048dfaa31d496ca0f81800a3bcc80 https://www.encodeproject.org/files/ENCFF352PXN/@@download/ENCFF352PXN.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF673VPE bed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF058OZQ, ENCFF406XEH 5728991 ENCODE Processing Pipeline ebe930090b603b626707ecd427f48877 https://www.encodeproject.org/files/ENCFF673VPE/@@download/ENCFF673VPE.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF477KMO bed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF370PSF, ENCFF658AIS 6477123 ENCODE Processing Pipeline abbc39dec14038a5d6d4209798bd9a24 https://www.encodeproject.org/files/ENCFF477KMO/@@download/ENCFF477KMO.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF745QWG bigBed narrowPeak optimal idr thresholded peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF837QHJ 2112506 ENCODE Processing Pipeline 10af06479488f276787cc286b49b2458 https://www.encodeproject.org/files/ENCFF745QWG/@@download/ENCFF745QWG.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF957IBE bed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF058OZQ, ENCFF370PSF, ENCFF406XEH, ENCFF658AIS 6698355 ENCODE Processing Pipeline 7ef5a49cfee88a6b124c262bb6f733f3 https://www.encodeproject.org/files/ENCFF957IBE/@@download/ENCFF957IBE.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF068ZIQ bigBed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF673VPE 13424227 ENCODE Processing Pipeline 474052edb5dfb2da5c9e96deea144997 https://www.encodeproject.org/files/ENCFF068ZIQ/@@download/ENCFF068ZIQ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF639EJK bed narrowPeak conservative idr thresholded peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF477KMO, ENCFF673VPE, ENCFF957IBE 1156238 ENCODE Processing Pipeline 4f06adea29026bd0d20de6c890745220 https://www.encodeproject.org/files/ENCFF639EJK/@@download/ENCFF639EJK.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF837QHJ bed narrowPeak optimal idr thresholded peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF477KMO, ENCFF673VPE, ENCFF957IBE 1167325 ENCODE Processing Pipeline 88e740cf796432bbac51385b15ea8d76 https://www.encodeproject.org/files/ENCFF837QHJ/@@download/ENCFF837QHJ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF472OXH bigBed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF477KMO 13455959 ENCODE Processing Pipeline 1e450c855f212113765f6b38173a6bca https://www.encodeproject.org/files/ENCFF472OXH/@@download/ENCFF472OXH.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF646VSL bigBed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF957IBE 13600748 ENCODE Processing Pipeline 9370c3462558706169fdb9e5e70148cc https://www.encodeproject.org/files/ENCFF646VSL/@@download/ENCFF646VSL.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF095RAG bigBed narrowPeak conservative idr thresholded peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF639EJK 2094004 ENCODE Processing Pipeline 497ae5ea4aafda3a2575462c01168c9b https://www.encodeproject.org/files/ENCFF095RAG/@@download/ENCFF095RAG.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF518GRP bam alignments ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 50 ENCFF435TOG, ENCFF807MUK 1102293383 ENCODE Processing Pipeline 559578d3ae13356a5089e75b5dd1ff9d https://www.encodeproject.org/files/ENCFF518GRP/@@download/ENCFF518GRP.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF574JJN bam unfiltered alignments ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 50 ENCFF366KUG, ENCFF807MUK 1176805469 ENCODE Processing Pipeline 6714938d9141424a6028ae4c635f3f12 https://www.encodeproject.org/files/ENCFF574JJN/@@download/ENCFF574JJN.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF924XUU bam alignments ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 50 ENCFF366KUG, ENCFF807MUK 842128068 ENCODE Processing Pipeline cd9304a964fcf6e83c804ea0d476e4c4 https://www.encodeproject.org/files/ENCFF924XUU/@@download/ENCFF924XUU.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF869BCE bam unfiltered alignments ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 50 ENCFF435TOG, ENCFF807MUK 1525805761 ENCODE Processing Pipeline b9dcdb1d5a1675417a4f2ea76742dea3 https://www.encodeproject.org/files/ENCFF869BCE/@@download/ENCFF869BCE.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF028IJX bigWig signal p-value ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF518GRP 626579985 ENCODE Processing Pipeline c10bef98327be844ec1160daa0982299 https://www.encodeproject.org/files/ENCFF028IJX/@@download/ENCFF028IJX.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF374OPD bigWig signal p-value ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF518GRP, ENCFF924XUU 1269892538 ENCODE Processing Pipeline 973e1cfcc2fd3ec8272d6e09b3d308f9 https://www.encodeproject.org/files/ENCFF374OPD/@@download/ENCFF374OPD.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF618OVE bed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF518GRP, ENCFF924XUU 6698758 ENCODE Processing Pipeline 18c1e407dcfbbe6b7e5b747a0dd75d3c https://www.encodeproject.org/files/ENCFF618OVE/@@download/ENCFF618OVE.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF901DDA bed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF518GRP 6321436 ENCODE Processing Pipeline 226a375cdfc7012ccf666775f92149d7 https://www.encodeproject.org/files/ENCFF901DDA/@@download/ENCFF901DDA.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF798EUL bigBed narrowPeak conservative idr thresholded peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF562IOY 2091794 ENCODE Processing Pipeline a4e46ab7ce904c98d7267c4b896b7520 https://www.encodeproject.org/files/ENCFF798EUL/@@download/ENCFF798EUL.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF352XJS bigWig fold change over control ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF518GRP 609900271 ENCODE Processing Pipeline 4dd10880a3762c6dab3d8d09600f472e https://www.encodeproject.org/files/ENCFF352XJS/@@download/ENCFF352XJS.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF229IAR bigWig fold change over control ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF518GRP, ENCFF924XUU 1094907588 ENCODE Processing Pipeline d6b03c24e0e32b7b3cd2c07e076d7864 https://www.encodeproject.org/files/ENCFF229IAR/@@download/ENCFF229IAR.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF088ETE bed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF924XUU 5730112 ENCODE Processing Pipeline 69f10978867227b1778fdc35f1339bfd https://www.encodeproject.org/files/ENCFF088ETE/@@download/ENCFF088ETE.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF565HEZ bigBed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1 ENCFF901DDA 13264286 ENCODE Processing Pipeline 3e5e0d438728474de5ea4b88c3778808 https://www.encodeproject.org/files/ENCFF565HEZ/@@download/ENCFF565HEZ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF524OMS bigBed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF618OVE 13597260 ENCODE Processing Pipeline 77768c3398c973c463b5d93f1e0569ad https://www.encodeproject.org/files/ENCFF524OMS/@@download/ENCFF524OMS.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF201MOM bed narrowPeak optimal idr thresholded peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF088ETE, ENCFF618OVE, ENCFF901DDA 1163150 ENCODE Processing Pipeline a2e668e5d2b1eee01a1e10e713d8b6b6 https://www.encodeproject.org/files/ENCFF201MOM/@@download/ENCFF201MOM.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF723BBU bigBed narrowPeak optimal idr thresholded peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF201MOM 2105727 ENCODE Processing Pipeline 74c88eaba3b4767dc8424ad6b45ade4a https://www.encodeproject.org/files/ENCFF723BBU/@@download/ENCFF723BBU.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF370VQE bigBed narrowPeak peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 2 ENCFF088ETE 13418869 ENCODE Processing Pipeline 743fc2c5562cbcb546da8bd55ec7855e https://www.encodeproject.org/files/ENCFF370VQE/@@download/ENCFF370VQE.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF562IOY bed narrowPeak conservative idr thresholded peaks ENCSR445QRF ChIP-seq UBERON:0002107 liver tissue child female 4 year Homo sapiens HNF4A-human ENCAB000AHP DNA False 2016-06-30 ENCODE 1, 2 ENCFF001TDO, ENCFF088ETE, ENCFF618OVE, ENCFF901DDA 1155630 ENCODE Processing Pipeline 09ce4a47a5d702a4d3aaee66fa1d5942 https://www.encodeproject.org/files/ENCFF562IOY/@@download/ENCFF562IOY.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NYS bam alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000NZH 852373336 Richard Myers, HAIB 07e7eb98afe186496a387c34b4699b9a https://www.encodeproject.org/files/ENCFF000NYS/@@download/ENCFF000NYS.bam hg19 archived low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NYT bigBed broadPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TXW 480299 Richard Myers, HAIB cc9f378c2c3af70f19f99378f8bccb50 https://www.encodeproject.org/files/ENCFF000NYT/@@download/ENCFF000NYT.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NYU bigBed broadPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TXX 305845 Richard Myers, HAIB 84599874511916d9ca9e86da43e1c060 https://www.encodeproject.org/files/ENCFF000NYU/@@download/ENCFF000NYU.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NYV bigWig raw signal ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 25608562 Richard Myers, HAIB 10c4ca4024c96d05a7e4d81f0b886008 https://www.encodeproject.org/files/ENCFF000NYV/@@download/ENCFF000NYV.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NYW bam alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000NZG 1341600814 Richard Myers, HAIB 6a14de4571be25a5eb6dffbb8469b43d https://www.encodeproject.org/files/ENCFF000NYW/@@download/ENCFF000NYW.bam hg19 archived low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NYX bigWig raw signal ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 9992559 Richard Myers, HAIB a05c1182b3269efa5353f54d7238e810 https://www.encodeproject.org/files/ENCFF000NYX/@@download/ENCFF000NYX.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NZG fastq reads ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 754739900 Richard Myers, HAIB a18d83a560f04bb18b4ab5ea2caecc60 https://www.encodeproject.org/files/ENCFF000NZG/@@download/ENCFF000NZG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000NZH fastq reads ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 558811486 Richard Myers, HAIB aa9f424a3feae1d620194ec0cb465151 https://www.encodeproject.org/files/ENCFF000NZH/@@download/ENCFF000NZH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCU/ released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001TXW bed broadPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 1 240803 Richard Myers, HAIB f24789c55ae60cf5179f98e5964a4fd1 https://www.encodeproject.org/files/ENCFF001TXW/@@download/ENCFF001TXW.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001TXX bed broadPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 1 126216 Richard Myers, HAIB 0786f37aa6f0692d2aaef5817f7e4054 https://www.encodeproject.org/files/ENCFF001TXX/@@download/ENCFF001TXX.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF002CHI bed narrowPeak optimal idr thresholded peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 115128 ENCODE Consortium Analysis Working Group 0258dfcc5a886fb896f9f4e633e299dd https://www.encodeproject.org/files/ENCFF002CHI/@@download/ENCFF002CHI.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF845LPS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE ENCFF002CHI 319108 ENCODE Consortium c3b3da65ad51e994e40795209e4612c0 https://www.encodeproject.org/files/ENCFF845LPS/@@download/ENCFF845LPS.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF699DCV bam unfiltered alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZH, ENCFF643CGH 685221658 ENCODE Processing Pipeline 53d4d30f6b1baa581cb2d730952d29f6 https://www.encodeproject.org/files/ENCFF699DCV/@@download/ENCFF699DCV.bam GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF238NNG bam alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZH, ENCFF643CGH 310275520 ENCODE Processing Pipeline 7599dcd4abaf09cb6ffedc43703a36c7 https://www.encodeproject.org/files/ENCFF238NNG/@@download/ENCFF238NNG.bam GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF465HGT bam unfiltered alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZG, ENCFF643CGH 994115228 ENCODE Processing Pipeline a3e89d80ab8ae55bec4762011d9d61bf https://www.encodeproject.org/files/ENCFF465HGT/@@download/ENCFF465HGT.bam GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF725DLZ bam alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZG, ENCFF643CGH 599962686 ENCODE Processing Pipeline 5f82c1cb2947b17272ec39b3c5bbaead https://www.encodeproject.org/files/ENCFF725DLZ/@@download/ENCFF725DLZ.bam GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF369KBK bam unfiltered alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZH, ENCFF807MUK 682953244 ENCODE Processing Pipeline 4322108bb08030026dd22b8c28aee2aa https://www.encodeproject.org/files/ENCFF369KBK/@@download/ENCFF369KBK.bam hg19 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF187YDX bam alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000NZH, ENCFF807MUK 309178351 ENCODE Processing Pipeline 0c58dd0be7608af3d9c84b4dd1f1ba83 https://www.encodeproject.org/files/ENCFF187YDX/@@download/ENCFF187YDX.bam hg19 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF234DXO bam alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZG, ENCFF807MUK 597556285 ENCODE Processing Pipeline 0d0d50c13ac18ccee1fbf4878e8be6b7 https://www.encodeproject.org/files/ENCFF234DXO/@@download/ENCFF234DXO.bam hg19 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF431HRP bam unfiltered alignments ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000NZG, ENCFF807MUK 990901497 ENCODE Processing Pipeline 9f7b5e1bb883c4fac30a6a6ddf7424ab https://www.encodeproject.org/files/ENCFF431HRP/@@download/ENCFF431HRP.bam hg19 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF174NFH bigWig signal p-value ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF725DLZ 406639379 ENCODE Processing Pipeline bf6ddeae2978cfe43bbb307e574a477e https://www.encodeproject.org/files/ENCFF174NFH/@@download/ENCFF174NFH.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF619YLP bigWig signal p-value ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF238NNG, ENCFF438FFV 360626772 ENCODE Processing Pipeline 62fd7cafe0bc99068264162e1397bebb https://www.encodeproject.org/files/ENCFF619YLP/@@download/ENCFF619YLP.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF826BKR bigWig signal p-value ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF238NNG, ENCFF438FFV, ENCFF562HPN, ENCFF725DLZ 734765993 ENCODE Processing Pipeline 45a7696aa832d3bf5a6d2752c8fdc346 https://www.encodeproject.org/files/ENCFF826BKR/@@download/ENCFF826BKR.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF296HRK bigWig fold change over control ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF725DLZ 279053604 ENCODE Processing Pipeline 1aa2900e8a4e7c79af452f130319519e https://www.encodeproject.org/files/ENCFF296HRK/@@download/ENCFF296HRK.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF399SZY bigWig fold change over control ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF238NNG, ENCFF438FFV, ENCFF562HPN, ENCFF725DLZ 500378476 ENCODE Processing Pipeline cd33d6d28a772dd9f73ad3a6581fc840 https://www.encodeproject.org/files/ENCFF399SZY/@@download/ENCFF399SZY.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF464GYA bigWig fold change over control ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF238NNG, ENCFF438FFV 128337601 ENCODE Processing Pipeline 582e14c948126fd07fb446d6f865bf84 https://www.encodeproject.org/files/ENCFF464GYA/@@download/ENCFF464GYA.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF899RAJ bed narrowPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF562HPN, ENCFF725DLZ 4360194 ENCODE Processing Pipeline 7219bebfbd849aed818cd746acdedf15 https://www.encodeproject.org/files/ENCFF899RAJ/@@download/ENCFF899RAJ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF404QHU bed narrowPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF238NNG, ENCFF438FFV 1149531 ENCODE Processing Pipeline 3124f38680d3e4bbe13b65f769b59656 https://www.encodeproject.org/files/ENCFF404QHU/@@download/ENCFF404QHU.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF270CFW bigBed narrowPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF404QHU 2129781 ENCODE Processing Pipeline 1580bc3fe1c243f50b7c708cc2328303 https://www.encodeproject.org/files/ENCFF270CFW/@@download/ENCFF270CFW.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF486GIV bed narrowPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF238NNG, ENCFF438FFV, ENCFF562HPN, ENCFF725DLZ 5175861 ENCODE Processing Pipeline 76ccc9fd1954871ffa96f188d6c91246 https://www.encodeproject.org/files/ENCFF486GIV/@@download/ENCFF486GIV.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF204BQF bigBed narrowPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF899RAJ 10686924 ENCODE Processing Pipeline 6b8c7b7e572f12ef62ed82b072f63048 https://www.encodeproject.org/files/ENCFF204BQF/@@download/ENCFF204BQF.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF723KBR bigBed narrowPeak peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF486GIV 11309209 ENCODE Processing Pipeline d8243b96aa2324c4072438a1f7da30af https://www.encodeproject.org/files/ENCFF723KBR/@@download/ENCFF723KBR.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF510FUM bed narrowPeak optimal idr thresholded peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF404QHU, ENCFF419RSJ, ENCFF486GIV, ENCFF899RAJ 87078 ENCODE Processing Pipeline e5671af475cef3c62bdaba84b37c57e1 https://www.encodeproject.org/files/ENCFF510FUM/@@download/ENCFF510FUM.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF803HGS bed narrowPeak conservative idr thresholded peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF404QHU, ENCFF419RSJ, ENCFF486GIV, ENCFF899RAJ 39648 ENCODE Processing Pipeline f65e486ab2cb208ecf0b8478980f1e3b https://www.encodeproject.org/files/ENCFF803HGS/@@download/ENCFF803HGS.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF155DSW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF510FUM 228448 ENCODE Processing Pipeline 2da29a38a1d9d0afebf60481cf264297 https://www.encodeproject.org/files/ENCFF155DSW/@@download/ENCFF155DSW.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF208HOU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BHB ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF803HGS 125694 ENCODE Processing Pipeline 63caac3fdacbe8828580996dc6de6b0c https://www.encodeproject.org/files/ENCFF208HOU/@@download/ENCFF208HOU.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000MWI bigBed broadPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TRK 270458 Richard Myers, HAIB cd3f1f1387ca094d8362c2b1bf5e4b8d https://www.encodeproject.org/files/ENCFF000MWI/@@download/ENCFF000MWI.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000MWJ bigBed broadPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TRL 279027 Richard Myers, HAIB a614e2e663c00a952245770cf6855849 https://www.encodeproject.org/files/ENCFF000MWJ/@@download/ENCFF000MWJ.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000MWK bam alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000MWR 1479102561 Richard Myers, HAIB 277c8e162ce8672db52f7c37323456c6 https://www.encodeproject.org/files/ENCFF000MWK/@@download/ENCFF000MWK.bam hg19 archived low read length biological replicates with identical biosample ENCFF000MWL bam alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000MWV 1951872284 Richard Myers, HAIB 956f565436c79bafe0f2c21edf6aaf99 https://www.encodeproject.org/files/ENCFF000MWL/@@download/ENCFF000MWL.bam hg19 archived low read length biological replicates with identical biosample ENCFF000MWM bigWig raw signal ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 1 8435358 Richard Myers, HAIB 87fe3cf050fdbcd40979c41e263d035f https://www.encodeproject.org/files/ENCFF000MWM/@@download/ENCFF000MWM.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000MWN bigWig raw signal ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 1 13152616 Richard Myers, HAIB b01534f9d4b9ada083539567ea58c1f8 https://www.encodeproject.org/files/ENCFF000MWN/@@download/ENCFF000MWN.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000MWR fastq reads ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1465772209 Richard Myers, HAIB 9d583412509a7f6c8b59c186e7668eeb https://www.encodeproject.org/files/ENCFF000MWR/@@download/ENCFF000MWR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF000MWV fastq reads ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1958922263 Richard Myers, HAIB a7f8fea140cb20c8a2cc649479735b92 https://www.encodeproject.org/files/ENCFF000MWV/@@download/ENCFF000MWV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF001TRK bed broadPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 1 119243 Richard Myers, HAIB 9a033fe031324ce8e9510144c674a79d https://www.encodeproject.org/files/ENCFF001TRK/@@download/ENCFF001TRK.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF001TRL bed broadPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 1 134692 Richard Myers, HAIB e314747374d7d8fbff011d21f63a34e9 https://www.encodeproject.org/files/ENCFF001TRL/@@download/ENCFF001TRL.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF002CFG bed narrowPeak optimal idr thresholded peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 171585 ENCODE Consortium Analysis Working Group 855e1ac06f0ade38ebf68e24b50e1240 https://www.encodeproject.org/files/ENCFF002CFG/@@download/ENCFF002CFG.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF042NFZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE ENCFF002CFG 506042 ENCODE Consortium f8418e171c3cdacb54631f0e22e8d2a7 https://www.encodeproject.org/files/ENCFF042NFZ/@@download/ENCFF042NFZ.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF697IMJ bam alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MWR, ENCFF643CGH 935860438 ENCODE Processing Pipeline ab4296a0f502639983c28a38df35e814 https://www.encodeproject.org/files/ENCFF697IMJ/@@download/ENCFF697IMJ.bam GRCh38 released low read length biological replicates with identical biosample ENCFF798VAK bam unfiltered alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MWR, ENCFF643CGH 1607681427 ENCODE Processing Pipeline 74d655ed677b4acd829f13794d12789c https://www.encodeproject.org/files/ENCFF798VAK/@@download/ENCFF798VAK.bam GRCh38 released low read length biological replicates with identical biosample ENCFF675HNB bam unfiltered alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MWV, ENCFF643CGH 2125526413 ENCODE Processing Pipeline a9f533e08dca977843be1765afa0af01 https://www.encodeproject.org/files/ENCFF675HNB/@@download/ENCFF675HNB.bam GRCh38 released low read length biological replicates with identical biosample ENCFF523LJK bam alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MWV, ENCFF643CGH 1291127895 ENCODE Processing Pipeline 1fccfd21c43d1a3e03a0ea65b65331e8 https://www.encodeproject.org/files/ENCFF523LJK/@@download/ENCFF523LJK.bam GRCh38 released low read length biological replicates with identical biosample ENCFF102RTL bam unfiltered alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MWR, ENCFF807MUK 1601869760 ENCODE Processing Pipeline c6ec14656c8119dc0e81aae5ecdd5fc4 https://www.encodeproject.org/files/ENCFF102RTL/@@download/ENCFF102RTL.bam hg19 released low read length biological replicates with identical biosample ENCFF214OIG bam alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MWR, ENCFF807MUK 936042068 ENCODE Processing Pipeline 9ecf1c2e567e6168404e607a36f2663f https://www.encodeproject.org/files/ENCFF214OIG/@@download/ENCFF214OIG.bam hg19 released low read length biological replicates with identical biosample ENCFF476QIG bam unfiltered alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MWV, ENCFF807MUK 2119805604 ENCODE Processing Pipeline 11dcd09a77659dee58b014bf7fd3d277 https://www.encodeproject.org/files/ENCFF476QIG/@@download/ENCFF476QIG.bam hg19 released low read length biological replicates with identical biosample ENCFF488IBU bam alignments ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MWV, ENCFF807MUK 1291191700 ENCODE Processing Pipeline f322b755b94ffb769f18ea0e2c9ab0e4 https://www.encodeproject.org/files/ENCFF488IBU/@@download/ENCFF488IBU.bam hg19 released low read length biological replicates with identical biosample ENCFF622PBL bigWig signal p-value ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF697IMJ 593076675 ENCODE Processing Pipeline 95c619440d4774445bd65f82dfc74579 https://www.encodeproject.org/files/ENCFF622PBL/@@download/ENCFF622PBL.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF463NSR bigWig signal p-value ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 ENCFF523LJK, ENCFF656HEF 731108367 ENCODE Processing Pipeline 1181530a61f5831f36016f64d96d7146 https://www.encodeproject.org/files/ENCFF463NSR/@@download/ENCFF463NSR.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF494GFB bigWig signal p-value ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF523LJK, ENCFF656HEF, ENCFF697IMJ 818318658 ENCODE Processing Pipeline 4b827144dfb14c1df2a15c99087cbdcf https://www.encodeproject.org/files/ENCFF494GFB/@@download/ENCFF494GFB.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF668RXF bigWig fold change over control ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF697IMJ 558320929 ENCODE Processing Pipeline a148bf127229949f2ee0f703f24bf7ea https://www.encodeproject.org/files/ENCFF668RXF/@@download/ENCFF668RXF.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF406LCV bigWig fold change over control ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 ENCFF523LJK, ENCFF656HEF 684036430 ENCODE Processing Pipeline f1721300b13b5bd33049f702d103d54d https://www.encodeproject.org/files/ENCFF406LCV/@@download/ENCFF406LCV.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF705EUJ bigWig fold change over control ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF523LJK, ENCFF656HEF, ENCFF697IMJ 968417451 ENCODE Processing Pipeline f4026de6fe56b2a2d7370f27ddd51388 https://www.encodeproject.org/files/ENCFF705EUJ/@@download/ENCFF705EUJ.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF428AQR bed narrowPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF523LJK, ENCFF656HEF, ENCFF697IMJ 6882638 ENCODE Processing Pipeline a163df53a865631549c263c4cb3e000a https://www.encodeproject.org/files/ENCFF428AQR/@@download/ENCFF428AQR.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF216EYM bed narrowPeak conservative idr thresholded peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF274CGL, ENCFF419RSJ, ENCFF428AQR, ENCFF672LYJ 184104 ENCODE Processing Pipeline 8b0a0e61049b6c12f7f076aa811b9f2d https://www.encodeproject.org/files/ENCFF216EYM/@@download/ENCFF216EYM.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF417XUC bigBed narrowPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 ENCFF672LYJ 13279103 ENCODE Processing Pipeline 0e3c43900734181deb6f94941df766ad https://www.encodeproject.org/files/ENCFF417XUC/@@download/ENCFF417XUC.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF072NOR bigBed narrowPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 ENCFF274CGL 13150135 ENCODE Processing Pipeline 275e57cc84e0f20d73d3d9f98218c336 https://www.encodeproject.org/files/ENCFF072NOR/@@download/ENCFF072NOR.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF818POY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF216EYM 427767 ENCODE Processing Pipeline e1ccaf0298462a868b7da526573e3a39 https://www.encodeproject.org/files/ENCFF818POY/@@download/ENCFF818POY.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF672LYJ bed narrowPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF697IMJ 6098964 ENCODE Processing Pipeline c320087fcfbe6b88ad18708d56966205 https://www.encodeproject.org/files/ENCFF672LYJ/@@download/ENCFF672LYJ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF274CGL bed narrowPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 2 ENCFF523LJK, ENCFF656HEF 6225873 ENCODE Processing Pipeline 01fa803a18a998f2ceeb0bdf7cc116ce https://www.encodeproject.org/files/ENCFF274CGL/@@download/ENCFF274CGL.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF062CUB bigBed narrowPeak peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF428AQR 13170681 ENCODE Processing Pipeline 4bd61b2c8b03aef4bf752458f4154e15 https://www.encodeproject.org/files/ENCFF062CUB/@@download/ENCFF062CUB.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF826YLA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF851UTY 449905 ENCODE Processing Pipeline d80957d2f332221a7c2e4f202ff9d0a7 https://www.encodeproject.org/files/ENCFF826YLA/@@download/ENCFF826YLA.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF851UTY bed narrowPeak optimal idr thresholded peaks ENCSR000BPS ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ATF3-human ENCAB000ADZ DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF274CGL, ENCFF419RSJ, ENCFF428AQR, ENCFF672LYJ 197435 ENCODE Processing Pipeline e06e0d40cee0a6b92de8eb706f0f3b65 https://www.encodeproject.org/files/ENCFF851UTY/@@download/ENCFF851UTY.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF000PZR bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QAD 724967517 Richard Myers, HAIB 44933e7b898c45a05c028fa556fe6df5 https://www.encodeproject.org/files/ENCFF000PZR/@@download/ENCFF000PZR.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000PZS bigBed broadPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJV 277544 Richard Myers, HAIB c6ff6501ac73e183d411ed92b9b9478d https://www.encodeproject.org/files/ENCFF000PZS/@@download/ENCFF000PZS.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000PZT bigBed broadPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJW 412886 Richard Myers, HAIB 05c16e30e01e5049f60565228351800f https://www.encodeproject.org/files/ENCFF000PZT/@@download/ENCFF000PZT.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000PZU bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QAG 887356958 Richard Myers, HAIB a7f1d54b0ba75fe2d39fe2f15f27e12c https://www.encodeproject.org/files/ENCFF000PZU/@@download/ENCFF000PZU.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000PZW bigWig raw signal ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 9304110 Richard Myers, HAIB 82774d4abfd3d4eaea053677cc62b0d5 https://www.encodeproject.org/files/ENCFF000PZW/@@download/ENCFF000PZW.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF000PZX bigWig raw signal ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 14335386 Richard Myers, HAIB 342b5a20b68cf59da04e830d15fcfb81 https://www.encodeproject.org/files/ENCFF000PZX/@@download/ENCFF000PZX.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF000QAD fastq reads ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 639416588 Richard Myers, HAIB 41f21840663efa4d30658feb461bd82e https://www.encodeproject.org/files/ENCFF000QAD/@@download/ENCFF000QAD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QAG fastq reads ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 842080084 Richard Myers, HAIB d5ee5136c9faa9f506d3a6aa1de370c6 https://www.encodeproject.org/files/ENCFF000QAG/@@download/ENCFF000QAG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF001UJV bed broadPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 130970 Richard Myers, HAIB ec22eab1c9937560e7edbf6f3ad4823e https://www.encodeproject.org/files/ENCFF001UJV/@@download/ENCFF001UJV.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF001UJW bed broadPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 216089 Richard Myers, HAIB bf4270991ba79f1639f996dfa4db6949 https://www.encodeproject.org/files/ENCFF001UJW/@@download/ENCFF001UJW.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF002CLX bed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 212269 ENCODE Consortium Analysis Working Group 351582bb9b47db34b6c4e31180a91d50 https://www.encodeproject.org/files/ENCFF002CLX/@@download/ENCFF002CLX.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample control low read depth ENCFF360UPF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE ENCFF002CLX 517062 ENCODE Consortium dca239eafae13672688e4cfc228c637f https://www.encodeproject.org/files/ENCFF360UPF/@@download/ENCFF360UPF.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF906ZOM bam unfiltered alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAD, ENCFF643CGH 878463243 ENCODE Processing Pipeline 39cabd1b32442a256bf0e5f03d6b3bfc https://www.encodeproject.org/files/ENCFF906ZOM/@@download/ENCFF906ZOM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF401KIO bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAD, ENCFF643CGH 487812812 ENCODE Processing Pipeline 8531a957858f31e389f85b8844b2923c https://www.encodeproject.org/files/ENCFF401KIO/@@download/ENCFF401KIO.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF639FFA bam unfiltered alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAG, ENCFF643CGH 1116340109 ENCODE Processing Pipeline cad8d73804fb0eb06cfc0507cf15a8e9 https://www.encodeproject.org/files/ENCFF639FFA/@@download/ENCFF639FFA.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF398SXO bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAG, ENCFF643CGH 593850793 ENCODE Processing Pipeline 88209b545cbda3c0e4ec8efa5786855a https://www.encodeproject.org/files/ENCFF398SXO/@@download/ENCFF398SXO.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF093QSS bam unfiltered alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAD, ENCFF807MUK 876794946 ENCODE Processing Pipeline 77836f583589c13544b784b03fc1f399 https://www.encodeproject.org/files/ENCFF093QSS/@@download/ENCFF093QSS.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF006UXO bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAD, ENCFF807MUK 488117088 ENCODE Processing Pipeline 4068c0f0a3a9ae9ec765fb3bb351fbdd https://www.encodeproject.org/files/ENCFF006UXO/@@download/ENCFF006UXO.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF364BDB bam unfiltered alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAG, ENCFF807MUK 1114739788 ENCODE Processing Pipeline 94f4a7f864f97dd4fa3c823ace992639 https://www.encodeproject.org/files/ENCFF364BDB/@@download/ENCFF364BDB.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF468AKT bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAG, ENCFF807MUK 594261500 ENCODE Processing Pipeline 2a361fc67c68b5ce356d2d4892d8e622 https://www.encodeproject.org/files/ENCFF468AKT/@@download/ENCFF468AKT.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF136XEI bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401KIO, ENCFF772PJM 214353811 ENCODE Processing Pipeline c4cf495d4eb38c52d73035562a7b5dc0 https://www.encodeproject.org/files/ENCFF136XEI/@@download/ENCFF136XEI.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF348XLA bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF398SXO, ENCFF772PJM 206940532 ENCODE Processing Pipeline 7a3867e7c4742a1633ed08d67b34f7b1 https://www.encodeproject.org/files/ENCFF348XLA/@@download/ENCFF348XLA.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF151QKU bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF398SXO, ENCFF401KIO, ENCFF772PJM 188002672 ENCODE Processing Pipeline c64ed3c8ca120d5496dc416e30103657 https://www.encodeproject.org/files/ENCFF151QKU/@@download/ENCFF151QKU.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF120VZU bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401KIO, ENCFF772PJM 204647979 ENCODE Processing Pipeline 93876a08841395e9a8f9a36aebf88284 https://www.encodeproject.org/files/ENCFF120VZU/@@download/ENCFF120VZU.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF912HSU bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF398SXO, ENCFF401KIO, ENCFF772PJM 5554652 ENCODE Processing Pipeline bb9b6f8752b916f9b14c57d4038020e5 https://www.encodeproject.org/files/ENCFF912HSU/@@download/ENCFF912HSU.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF928OFV bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401KIO, ENCFF772PJM 4608923 ENCODE Processing Pipeline d7acca94b1164ef2ee6e3e4e901095fd https://www.encodeproject.org/files/ENCFF928OFV/@@download/ENCFF928OFV.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF068VFA bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF912HSU 12724921 ENCODE Processing Pipeline 5947e084e74c61dad3e47596855b8239 https://www.encodeproject.org/files/ENCFF068VFA/@@download/ENCFF068VFA.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF825HSY bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF398SXO, ENCFF772PJM 223077456 ENCODE Processing Pipeline 6d3c8a86624468371d60ef05dd10dbc1 https://www.encodeproject.org/files/ENCFF825HSY/@@download/ENCFF825HSY.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF291YLM bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF398SXO, ENCFF401KIO, ENCFF772PJM 378937514 ENCODE Processing Pipeline 8837ddc367fba206c67bd3fa785d3298 https://www.encodeproject.org/files/ENCFF291YLM/@@download/ENCFF291YLM.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF501FIE bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF928OFV 10304445 ENCODE Processing Pipeline 8fce11503d55339d6e1090852097a87c https://www.encodeproject.org/files/ENCFF501FIE/@@download/ENCFF501FIE.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF840ZBH bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF780KUW 4341364 ENCODE Processing Pipeline 86dd67c9a3f1a584df19eda9cd0e9b56 https://www.encodeproject.org/files/ENCFF840ZBH/@@download/ENCFF840ZBH.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF461PRP bed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF780KUW, ENCFF912HSU, ENCFF928OFV 206712 ENCODE Processing Pipeline 709b8e71866304816aad277c92c8a529 https://www.encodeproject.org/files/ENCFF461PRP/@@download/ENCFF461PRP.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF780KUW bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF398SXO, ENCFF772PJM 1813656 ENCODE Processing Pipeline 0a31bd7c7d097b456fbae9809f31c11b https://www.encodeproject.org/files/ENCFF780KUW/@@download/ENCFF780KUW.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF711WZW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF461PRP 462954 ENCODE Processing Pipeline dc5d7bfb892bbc16f8b536fa313f85e1 https://www.encodeproject.org/files/ENCFF711WZW/@@download/ENCFF711WZW.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample control low read depth ENCFF000QCT bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QDH 1160484172 Richard Myers, HAIB b1b4dcb51da6fb67a786ddd60fd651af https://www.encodeproject.org/files/ENCFF000QCT/@@download/ENCFF000QCT.bam hg19 archived inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF000QCU bigBed broadPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UKP 348395 Richard Myers, HAIB 2b59fc2ff6d1be97356557186c186d81 https://www.encodeproject.org/files/ENCFF000QCU/@@download/ENCFF000QCU.bigBed hg19 archived inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF000QCV bigBed broadPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UKQ 520351 Richard Myers, HAIB 1665d624b7e1d5177e6310cfb9feb5f0 https://www.encodeproject.org/files/ENCFF000QCV/@@download/ENCFF000QCV.bigBed hg19 archived inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF000QCY bigWig raw signal ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 1 15292931 Richard Myers, HAIB 330d4387d621d861e56923176e27ef72 https://www.encodeproject.org/files/ENCFF000QCY/@@download/ENCFF000QCY.bigWig hg19 archived inconsistent platforms, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000QCZ bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QDJ 1510774310 Richard Myers, HAIB eda2ab07e66552a27d1b05ffe90fafd5 https://www.encodeproject.org/files/ENCFF000QCZ/@@download/ENCFF000QCZ.bam hg19 archived inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF000QDA bigWig raw signal ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 1 21203744 Richard Myers, HAIB 58d94ccc35edefaa79eb08d3df13e6ef https://www.encodeproject.org/files/ENCFF000QDA/@@download/ENCFF000QDA.bigWig hg19 archived inconsistent platforms, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000QDH fastq reads ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1119231529 Richard Myers, HAIB 5d09c14c17a2415631baae8e382669b0 https://www.encodeproject.org/files/ENCFF000QDH/@@download/ENCFF000QDH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF000QDJ fastq reads ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1476342849 Richard Myers, HAIB 05418c532444c1a97167b1c9c4fcea3e https://www.encodeproject.org/files/ENCFF000QDJ/@@download/ENCFF000QDJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF001UKP bed broadPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 1 187649 Richard Myers, HAIB 75044ed4b50141c9407944a29fc6f154 https://www.encodeproject.org/files/ENCFF001UKP/@@download/ENCFF001UKP.bed.gz hg19 archived inconsistent platforms, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UKQ bed broadPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 1 329971 Richard Myers, HAIB 99c5e56d15b4d804a40eb6f17617ab57 https://www.encodeproject.org/files/ENCFF001UKQ/@@download/ENCFF001UKQ.bed.gz hg19 archived inconsistent platforms, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CMG bed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 315726 ENCODE Consortium Analysis Working Group 1d1567ffccbd267df03c88c0b848fb7a https://www.encodeproject.org/files/ENCFF002CMG/@@download/ENCFF002CMG.bed.gz hg19 archived inconsistent platforms, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF217NGN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE ENCFF002CMG 690667 ENCODE Consortium a7d8aedb7fd36829c76975c71e41cc80 https://www.encodeproject.org/files/ENCFF217NGN/@@download/ENCFF217NGN.bigBed hg19 archived inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF271YAJ bam unfiltered alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QDH, ENCFF643CGH 1266209804 ENCODE Processing Pipeline 4a7787c521913708a048d282026911f9 https://www.encodeproject.org/files/ENCFF271YAJ/@@download/ENCFF271YAJ.bam GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF491DUD bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QDH, ENCFF643CGH 838143169 ENCODE Processing Pipeline 68835c98d12bf80ca87aceae4ea715d6 https://www.encodeproject.org/files/ENCFF491DUD/@@download/ENCFF491DUD.bam GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF079DUY bam unfiltered alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QDJ, ENCFF643CGH 1596593688 ENCODE Processing Pipeline 4bf78d37efc002f6f8b5cd7e41551fbb https://www.encodeproject.org/files/ENCFF079DUY/@@download/ENCFF079DUY.bam GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF112WHF bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QDJ, ENCFF643CGH 834158636 ENCODE Processing Pipeline 737a77a7329a778a1db4508694816d23 https://www.encodeproject.org/files/ENCFF112WHF/@@download/ENCFF112WHF.bam GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF922XZM bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QDH, ENCFF807MUK 838568154 ENCODE Processing Pipeline 83f43f6128f5f6870423375e7c88aa36 https://www.encodeproject.org/files/ENCFF922XZM/@@download/ENCFF922XZM.bam hg19 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF667QID bam unfiltered alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QDH, ENCFF807MUK 1263717040 ENCODE Processing Pipeline 2f5af03dcef1244a000784a2e77d0bbe https://www.encodeproject.org/files/ENCFF667QID/@@download/ENCFF667QID.bam hg19 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF468QVC bam unfiltered alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QDJ, ENCFF807MUK 1593465870 ENCODE Processing Pipeline 761ca028a3ebb1362423ca09c82bce94 https://www.encodeproject.org/files/ENCFF468QVC/@@download/ENCFF468QVC.bam hg19 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF183MYT bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QDJ, ENCFF807MUK 834574217 ENCODE Processing Pipeline 96ce150872f7d4e1af336fa348ef2772 https://www.encodeproject.org/files/ENCFF183MYT/@@download/ENCFF183MYT.bam hg19 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF780FJX bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF491DUD, ENCFF836OEO 654761975 ENCODE Processing Pipeline 060cca211f4d1820a427ce8678c946fc https://www.encodeproject.org/files/ENCFF780FJX/@@download/ENCFF780FJX.bigWig GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF526JYS bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF112WHF, ENCFF836OEO 613960516 ENCODE Processing Pipeline fa1477a07ff07818fcb9e01f69f973b6 https://www.encodeproject.org/files/ENCFF526JYS/@@download/ENCFF526JYS.bigWig GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF813JIT bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF112WHF, ENCFF491DUD, ENCFF836OEO 827809912 ENCODE Processing Pipeline 72312e1c14c95522901683af83d57b7e https://www.encodeproject.org/files/ENCFF813JIT/@@download/ENCFF813JIT.bigWig GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF717BCO bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF491DUD, ENCFF836OEO 519842501 ENCODE Processing Pipeline 33007d49ba914e0222553e95b23a6d20 https://www.encodeproject.org/files/ENCFF717BCO/@@download/ENCFF717BCO.bigWig GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF239VGO bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF112WHF, ENCFF836OEO 513198206 ENCODE Processing Pipeline 177f5052766cd0c83df6c027c8684029 https://www.encodeproject.org/files/ENCFF239VGO/@@download/ENCFF239VGO.bigWig GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF706GUM bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF491DUD, ENCFF836OEO 6268388 ENCODE Processing Pipeline 539ce4eb7c3b405d0b061c71a74b8bcb https://www.encodeproject.org/files/ENCFF706GUM/@@download/ENCFF706GUM.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF282KQX bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF112WHF, ENCFF836OEO 6526092 ENCODE Processing Pipeline 718f440292da58cd51b99a8121b7bf3d https://www.encodeproject.org/files/ENCFF282KQX/@@download/ENCFF282KQX.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF668SKC bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF112WHF, ENCFF491DUD, ENCFF836OEO 807417593 ENCODE Processing Pipeline 8b1e576e846e06f35350cf299c426b0d https://www.encodeproject.org/files/ENCFF668SKC/@@download/ENCFF668SKC.bigWig GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF762ZDW bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF970LID 12789980 ENCODE Processing Pipeline cb289db8df912544b9805fcf8af5c2e1 https://www.encodeproject.org/files/ENCFF762ZDW/@@download/ENCFF762ZDW.bigBed GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF825CZN bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF706GUM 12996980 ENCODE Processing Pipeline 9511957bdcb8dffa10c2ce9fb5d5abf5 https://www.encodeproject.org/files/ENCFF825CZN/@@download/ENCFF825CZN.bigBed GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF613YPH bed narrowPeak conservative idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF282KQX, ENCFF419RSJ, ENCFF706GUM, ENCFF970LID 301783 ENCODE Processing Pipeline c3ee9d8cb0d6c85dbde80b35e9a28ead https://www.encodeproject.org/files/ENCFF613YPH/@@download/ENCFF613YPH.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF706UMH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF613YPH 670552 ENCODE Processing Pipeline 05277c09a50dd2d9b2ff30ffe5773525 https://www.encodeproject.org/files/ENCFF706UMH/@@download/ENCFF706UMH.bigBed GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF800QDU bed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF282KQX, ENCFF419RSJ, ENCFF706GUM, ENCFF970LID 365755 ENCODE Processing Pipeline 6eec23a48cdde52ad1922299a27a72ad https://www.encodeproject.org/files/ENCFF800QDU/@@download/ENCFF800QDU.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF079KZJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF800QDU 765834 ENCODE Processing Pipeline bcca0bec94a80d1a02f66c4160da7787 https://www.encodeproject.org/files/ENCFF079KZJ/@@download/ENCFF079KZJ.bigBed GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF970LID bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF112WHF, ENCFF491DUD, ENCFF836OEO 6973318 ENCODE Processing Pipeline 5699a10f512ad737a3557ab65c6d76d4 https://www.encodeproject.org/files/ENCFF970LID/@@download/ENCFF970LID.bed.gz GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF379OZC bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF282KQX 12792240 ENCODE Processing Pipeline beeeacf12cc13a54a548b7ef4bd418d6 https://www.encodeproject.org/files/ENCFF379OZC/@@download/ENCFF379OZC.bigBed GRCh38 released inconsistent platforms, low read length, low read depth biological replicates with identical biosample ENCFF000MZP bam alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000MZX 948010282 Richard Myers, HAIB 3897aa3d15358095bf44f6b7056820bb https://www.encodeproject.org/files/ENCFF000MZP/@@download/ENCFF000MZP.bam hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000MZQ bam alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NAA 705843644 Richard Myers, HAIB 26543d457be1318fefdde7aae7b81366 https://www.encodeproject.org/files/ENCFF000MZQ/@@download/ENCFF000MZQ.bam hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000MZR bigBed broadPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TSF 143092 Richard Myers, HAIB 3e9cf1ca58dfca68f8b4849dfbcef20d https://www.encodeproject.org/files/ENCFF000MZR/@@download/ENCFF000MZR.bigBed hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000MZS bigBed broadPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TSG 158050 Richard Myers, HAIB f9976339d3fca110d77eb36abe8de7a6 https://www.encodeproject.org/files/ENCFF000MZS/@@download/ENCFF000MZS.bigBed hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000MZU bigWig raw signal ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 1 24591006 Richard Myers, HAIB 33bd64d6f51cc7686411ff694017abf3 https://www.encodeproject.org/files/ENCFF000MZU/@@download/ENCFF000MZU.bigWig hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000MZV bigWig raw signal ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 1 19942024 Richard Myers, HAIB c5460dd41c856ba07a12ba10b741b7f4 https://www.encodeproject.org/files/ENCFF000MZV/@@download/ENCFF000MZV.bigWig hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000MZX fastq reads ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 855755233 Richard Myers, HAIB 9f04c2fc914d74dc9380e7f61140347f https://www.encodeproject.org/files/ENCFF000MZX/@@download/ENCFF000MZX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NAI/ released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NAA fastq reads ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 611684293 Richard Myers, HAIB 5539e58f145db47b94d96552f422c65d https://www.encodeproject.org/files/ENCFF000NAA/@@download/ENCFF000NAA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NAH/ released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF001TSF bed broadPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 1 50889 Richard Myers, HAIB a59f2fa316c975c380ba37786215e3ff https://www.encodeproject.org/files/ENCFF001TSF/@@download/ENCFF001TSF.bed.gz hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TSG bed broadPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 1 59563 Richard Myers, HAIB 84231efff23f7973548c830e59e5d1a5 https://www.encodeproject.org/files/ENCFF001TSG/@@download/ENCFF001TSG.bed.gz hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CFO bed narrowPeak optimal idr thresholded peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 204700 ENCODE Consortium Analysis Working Group c0c762bbe57d6947f4cf6f91af263c70 https://www.encodeproject.org/files/ENCFF002CFO/@@download/ENCFF002CFO.bed.gz hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF507EQC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE ENCFF002CFO 590600 ENCODE Consortium e63b364a03a0d40228ece7d1b6918136 https://www.encodeproject.org/files/ENCFF507EQC/@@download/ENCFF507EQC.bigBed hg19 archived moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF979UTR bam unfiltered alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAA, ENCFF643CGH 821843615 ENCODE Processing Pipeline 0bcec409b4386115b690c6a01661b2ab https://www.encodeproject.org/files/ENCFF979UTR/@@download/ENCFF979UTR.bam GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF946SJM bam alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAA, ENCFF643CGH 523936487 ENCODE Processing Pipeline 2f756348abf7924828cdbfcafc9e7844 https://www.encodeproject.org/files/ENCFF946SJM/@@download/ENCFF946SJM.bam GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF522ITC bam unfiltered alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZX, ENCFF643CGH 1128020733 ENCODE Processing Pipeline c5addbc138fd3bd99a03846daf2873a4 https://www.encodeproject.org/files/ENCFF522ITC/@@download/ENCFF522ITC.bam GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF086NWX bam alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZX, ENCFF643CGH 653194705 ENCODE Processing Pipeline adc2880968b9e1b71b169f8bf8437cf3 https://www.encodeproject.org/files/ENCFF086NWX/@@download/ENCFF086NWX.bam GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF380FAD bam unfiltered alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAA, ENCFF807MUK 818492274 ENCODE Processing Pipeline aff19bad0cc241043018c381baa28b38 https://www.encodeproject.org/files/ENCFF380FAD/@@download/ENCFF380FAD.bam hg19 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF844ECI bam alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NAA, ENCFF807MUK 524166209 ENCODE Processing Pipeline b931f417a0adc54564c8d14952275a2c https://www.encodeproject.org/files/ENCFF844ECI/@@download/ENCFF844ECI.bam hg19 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF741QQZ bam unfiltered alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZX, ENCFF807MUK 1121998687 ENCODE Processing Pipeline 98973847b86fc67e8c7a79d75327a0e6 https://www.encodeproject.org/files/ENCFF741QQZ/@@download/ENCFF741QQZ.bam hg19 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF288LFN bam alignments ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZX, ENCFF807MUK 653405776 ENCODE Processing Pipeline bfb61cc3a27fc67b221d564673121c1c https://www.encodeproject.org/files/ENCFF288LFN/@@download/ENCFF288LFN.bam hg19 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF391XNE bigWig signal p-value ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF086NWX, ENCFF285GBC, ENCFF325BGM 497786954 ENCODE Processing Pipeline 86b652d2cd58a938f2644a23e23069bf https://www.encodeproject.org/files/ENCFF391XNE/@@download/ENCFF391XNE.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF657JGX bigWig signal p-value ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF285GBC, ENCFF325BGM, ENCFF946SJM 525227202 ENCODE Processing Pipeline 1691717338a609f0c47a9c5ea52acc71 https://www.encodeproject.org/files/ENCFF657JGX/@@download/ENCFF657JGX.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF151ELU bigWig signal p-value ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF086NWX, ENCFF285GBC, ENCFF325BGM, ENCFF946SJM 640887229 ENCODE Processing Pipeline 095c8a60e9055e874a50846e653ba2e5 https://www.encodeproject.org/files/ENCFF151ELU/@@download/ENCFF151ELU.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF360ZUI bed narrowPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF285GBC, ENCFF325BGM, ENCFF946SJM 4586855 ENCODE Processing Pipeline a079b2992b1d17394e039f5b154eefad https://www.encodeproject.org/files/ENCFF360ZUI/@@download/ENCFF360ZUI.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF283SQY bigWig fold change over control ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF285GBC, ENCFF325BGM, ENCFF946SJM 352408261 ENCODE Processing Pipeline 94cbe9287619f7e8b69a813f4d5ccb33 https://www.encodeproject.org/files/ENCFF283SQY/@@download/ENCFF283SQY.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF781GKO bigWig fold change over control ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF086NWX, ENCFF285GBC, ENCFF325BGM 426316657 ENCODE Processing Pipeline 7a86d0fb35e0e31d8e3df45d9a3c7077 https://www.encodeproject.org/files/ENCFF781GKO/@@download/ENCFF781GKO.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF020CLB bed narrowPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF086NWX, ENCFF285GBC, ENCFF325BGM 4384684 ENCODE Processing Pipeline d2fefe7ccbcb3aabd92d4cc4e0e7f884 https://www.encodeproject.org/files/ENCFF020CLB/@@download/ENCFF020CLB.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF204MVK bed narrowPeak conservative idr thresholded peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF020CLB, ENCFF360ZUI, ENCFF419RSJ, ENCFF776JXN 131425 ENCODE Processing Pipeline 1caea240ba3a72f5d5742a55e510d77d https://www.encodeproject.org/files/ENCFF204MVK/@@download/ENCFF204MVK.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF113NFH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF204MVK 302764 ENCODE Processing Pipeline 8aa339f2b972f4a6ef592bb59a81ad4a https://www.encodeproject.org/files/ENCFF113NFH/@@download/ENCFF113NFH.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF865MYW bigWig fold change over control ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF086NWX, ENCFF285GBC, ENCFF325BGM, ENCFF946SJM 635548512 ENCODE Processing Pipeline 934518c5d1860ad19ad553175f4d6697 https://www.encodeproject.org/files/ENCFF865MYW/@@download/ENCFF865MYW.bigWig GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF776JXN bed narrowPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF086NWX, ENCFF285GBC, ENCFF325BGM, ENCFF946SJM 5217110 ENCODE Processing Pipeline 46b1433ee3305c0057e96f093106fd4e https://www.encodeproject.org/files/ENCFF776JXN/@@download/ENCFF776JXN.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF307CHY bigBed narrowPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF776JXN 11335734 ENCODE Processing Pipeline a8fc1777bb7621f874fc55ec62ab0585 https://www.encodeproject.org/files/ENCFF307CHY/@@download/ENCFF307CHY.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF167BKY bed narrowPeak optimal idr thresholded peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF020CLB, ENCFF360ZUI, ENCFF419RSJ, ENCFF776JXN 161457 ENCODE Processing Pipeline b945dd19b97b57d0deb565923a6f415b https://www.encodeproject.org/files/ENCFF167BKY/@@download/ENCFF167BKY.bed.gz GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF554RKL bigBed narrowPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF020CLB 10691175 ENCODE Processing Pipeline 4b6e29e43e34602a35d80f3f23730535 https://www.encodeproject.org/files/ENCFF554RKL/@@download/ENCFF554RKL.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF212BVS bigBed narrowPeak peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF360ZUI 10486254 ENCODE Processing Pipeline 12ce9e4e59cffd209f01a19bebc04165 https://www.encodeproject.org/files/ENCFF212BVS/@@download/ENCFF212BVS.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF996AUB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPX ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens dexamethasone FOXA1-human ENCAB000AGM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF167BKY 351271 ENCODE Processing Pipeline cd31a754a0713773830606e8642be85b https://www.encodeproject.org/files/ENCFF996AUB/@@download/ENCFF996AUB.bigBed GRCh38 released moderate library complexity, mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000NHB bam alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NHP 264375859 Richard Myers, HAIB ffadccbc691b5acd2c061feb3dacb9f9 https://www.encodeproject.org/files/ENCFF000NHB/@@download/ENCFF000NHB.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NHC bigBed broadPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TTP 994381 Richard Myers, HAIB 1ae7d43c04c3fde8f189a8c1a384117a https://www.encodeproject.org/files/ENCFF000NHC/@@download/ENCFF000NHC.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NHD bigBed broadPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TTQ 885970 Richard Myers, HAIB 99b2ea969089e07f2a779a0b4ecff19b https://www.encodeproject.org/files/ENCFF000NHD/@@download/ENCFF000NHD.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000NHE bam alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NHM 687870087 Richard Myers, HAIB 33cba81ee76d227e6022905dcd099d28 https://www.encodeproject.org/files/ENCFF000NHE/@@download/ENCFF000NHE.bam hg19 archived low read length biological replicates with identical biosample ENCFF000NHF bigWig raw signal ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 1 44095376 Richard Myers, HAIB 895e35673bb2cc49252df5612ef965fc https://www.encodeproject.org/files/ENCFF000NHF/@@download/ENCFF000NHF.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NHH bigWig raw signal ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 1 48283919 Richard Myers, HAIB 085a04bd603dd60667cd20ab1c689953 https://www.encodeproject.org/files/ENCFF000NHH/@@download/ENCFF000NHH.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000NHM fastq reads ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1391072997 Richard Myers, HAIB 5c55d2f40b4e848a651394270a66b201 https://www.encodeproject.org/files/ENCFF000NHM/@@download/ENCFF000NHM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF000NHP fastq reads ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1960945915 Richard Myers, HAIB 0b8a11a9bf9c2745a58741778226617f https://www.encodeproject.org/files/ENCFF000NHP/@@download/ENCFF000NHP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF001TTP bed broadPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 1 552020 Richard Myers, HAIB b3cc229e1a48fa258ff5f7b81d25e593 https://www.encodeproject.org/files/ENCFF001TTP/@@download/ENCFF001TTP.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF001TTQ bed broadPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 1 481272 Richard Myers, HAIB 1f273bd3ca7f370fd8e569885110e8d4 https://www.encodeproject.org/files/ENCFF001TTQ/@@download/ENCFF001TTQ.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF498BNK bam unfiltered alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHM, ENCFF643CGH 1665155134 ENCODE Processing Pipeline 025502ab877b0d8c9f5dd80e712cffa8 https://www.encodeproject.org/files/ENCFF498BNK/@@download/ENCFF498BNK.bam GRCh38 released low read length biological replicates with identical biosample ENCFF415SIE bam alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHM, ENCFF643CGH 1012420132 ENCODE Processing Pipeline 9cbf074c7db96293bf987a5771626f43 https://www.encodeproject.org/files/ENCFF415SIE/@@download/ENCFF415SIE.bam GRCh38 released low read length biological replicates with identical biosample ENCFF916AFL bam alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHP, ENCFF643CGH 1369436583 ENCODE Processing Pipeline 4dc725f2761c8ab8dff44947ce89e93e https://www.encodeproject.org/files/ENCFF916AFL/@@download/ENCFF916AFL.bam GRCh38 released low read length biological replicates with identical biosample ENCFF659LAW bam unfiltered alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHP, ENCFF643CGH 2141909715 ENCODE Processing Pipeline 584f04b3eb75d2e0b08bc26505ff58c6 https://www.encodeproject.org/files/ENCFF659LAW/@@download/ENCFF659LAW.bam GRCh38 released low read length biological replicates with identical biosample ENCFF566LGK bam unfiltered alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHM, ENCFF807MUK 1659627883 ENCODE Processing Pipeline 8829b6d90cf3028ed0aeca260e9f59df https://www.encodeproject.org/files/ENCFF566LGK/@@download/ENCFF566LGK.bam hg19 released low read length biological replicates with identical biosample ENCFF309RPK bam alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHM, ENCFF807MUK 1012542744 ENCODE Processing Pipeline 78c2861bc59cefeb82833224adbedb3f https://www.encodeproject.org/files/ENCFF309RPK/@@download/ENCFF309RPK.bam hg19 released low read length biological replicates with identical biosample ENCFF453WTN bam alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHP, ENCFF807MUK 1369465419 ENCODE Processing Pipeline 852f3b35c115e60d74f35b28d766cde7 https://www.encodeproject.org/files/ENCFF453WTN/@@download/ENCFF453WTN.bam hg19 released low read length biological replicates with identical biosample ENCFF395QYJ bam unfiltered alignments ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHP, ENCFF807MUK 2134860993 ENCODE Processing Pipeline 5734c87fe0e2e58a3544c5140312f9e6 https://www.encodeproject.org/files/ENCFF395QYJ/@@download/ENCFF395QYJ.bam hg19 released low read length biological replicates with identical biosample ENCFF060QXT bigWig signal p-value ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 ENCFF415SIE, ENCFF656HEF 621373589 ENCODE Processing Pipeline d71534721c5edf9ff94889cbcf336bd7 https://www.encodeproject.org/files/ENCFF060QXT/@@download/ENCFF060QXT.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF006NOU bigWig signal p-value ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF916AFL 742183054 ENCODE Processing Pipeline d57091397006efe2367b9964603d97e8 https://www.encodeproject.org/files/ENCFF006NOU/@@download/ENCFF006NOU.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF989LTI bigWig signal p-value ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF415SIE, ENCFF656HEF, ENCFF916AFL 831480574 ENCODE Processing Pipeline d2324d23f1fb591d73f1621ec60c6a51 https://www.encodeproject.org/files/ENCFF989LTI/@@download/ENCFF989LTI.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF285YRP bigWig fold change over control ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF916AFL 711454313 ENCODE Processing Pipeline abaf6ae61d511f02aab5726f40cacc53 https://www.encodeproject.org/files/ENCFF285YRP/@@download/ENCFF285YRP.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF041KIM bigBed narrowPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF610EDQ 13149041 ENCODE Processing Pipeline 0305532bccdd3c58edf804fae01a84d6 https://www.encodeproject.org/files/ENCFF041KIM/@@download/ENCFF041KIM.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF476BDL bigWig fold change over control ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF415SIE, ENCFF656HEF, ENCFF916AFL 1005724400 ENCODE Processing Pipeline fb6cd03aac99e9a74867ac15a627a0a2 https://www.encodeproject.org/files/ENCFF476BDL/@@download/ENCFF476BDL.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF727NIO bigWig fold change over control ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 ENCFF415SIE, ENCFF656HEF 541356904 ENCODE Processing Pipeline a8fc5bc92c4b53ac6277875e835e2cc6 https://www.encodeproject.org/files/ENCFF727NIO/@@download/ENCFF727NIO.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF904RCL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF154NAC 1368507 ENCODE Processing Pipeline af7be895a8aa50458d770395976b711b https://www.encodeproject.org/files/ENCFF904RCL/@@download/ENCFF904RCL.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF050VEY bigBed narrowPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 ENCFF876WDK 13098483 ENCODE Processing Pipeline 883c5b4536f528944d28e3b37eebb627 https://www.encodeproject.org/files/ENCFF050VEY/@@download/ENCFF050VEY.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF186GQS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF404OSB 1386463 ENCODE Processing Pipeline 938219054b57bab58dfdd60594d86fe0 https://www.encodeproject.org/files/ENCFF186GQS/@@download/ENCFF186GQS.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF876WDK bed narrowPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1 ENCFF415SIE, ENCFF656HEF 6286361 ENCODE Processing Pipeline 6096775da84525c353e7a3b9b932b2ff https://www.encodeproject.org/files/ENCFF876WDK/@@download/ENCFF876WDK.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF994BNZ bed narrowPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 ENCFF656HEF, ENCFF916AFL 6466312 ENCODE Processing Pipeline 98d005b835186ca62cf6497fc40b69f1 https://www.encodeproject.org/files/ENCFF994BNZ/@@download/ENCFF994BNZ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF610EDQ bed narrowPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF415SIE, ENCFF656HEF, ENCFF916AFL 6897731 ENCODE Processing Pipeline 855d2463a90aa54375e78378c3a6d14e https://www.encodeproject.org/files/ENCFF610EDQ/@@download/ENCFF610EDQ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF330WDU bigBed narrowPeak peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 2 ENCFF994BNZ 13139341 ENCODE Processing Pipeline 188d187c31f55ebb1d1fdc1d81b110ca https://www.encodeproject.org/files/ENCFF330WDU/@@download/ENCFF330WDU.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF154NAC bed narrowPeak conservative idr thresholded peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF610EDQ, ENCFF876WDK, ENCFF994BNZ 740057 ENCODE Processing Pipeline 8abc5675916c56957895fa4dd4955171 https://www.encodeproject.org/files/ENCFF154NAC/@@download/ENCFF154NAC.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF404OSB bed narrowPeak optimal idr thresholded peaks ENCSR000BPE ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol SP1-human ENCAB000AKY DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF610EDQ, ENCFF876WDK, ENCFF994BNZ 752376 ENCODE Processing Pipeline aecdec7b31fc9db30b11613945fec2cf https://www.encodeproject.org/files/ENCFF404OSB/@@download/ENCFF404OSB.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF493APP fastq reads ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1831820877 Richard Myers, HAIB 6907002f4c993d5e928215c45513dd0b SRA:SRR5338776 https://www.encodeproject.org/files/ENCFF493APP/@@download/ENCFF493APP.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF213TBR fastq reads ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1921021613 Richard Myers, HAIB a113b4c4ab67d0b24b6af3de76ea4214 SRA:SRR5338775 https://www.encodeproject.org/files/ENCFF213TBR/@@download/ENCFF213TBR.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF683UBX bam unfiltered alignments ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF493APP, ENCFF807MUK 2225136434 ENCODE Processing Pipeline 3c58a2fff64d4c25a858a3404c1e65ba https://www.encodeproject.org/files/ENCFF683UBX/@@download/ENCFF683UBX.bam hg19 released antibody characterized with exemption ENCFF055WET bam unfiltered alignments ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF213TBR, ENCFF643CGH 2334933175 ENCODE Processing Pipeline 8ea5ea5a6df838ef709c84b97696d134 https://www.encodeproject.org/files/ENCFF055WET/@@download/ENCFF055WET.bam GRCh38 released antibody characterized with exemption ENCFF093BRP bam unfiltered alignments ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF493APP, ENCFF643CGH 2232814396 ENCODE Processing Pipeline 91d5d3d5c724241b7ca0b460fcdc6167 https://www.encodeproject.org/files/ENCFF093BRP/@@download/ENCFF093BRP.bam GRCh38 released antibody characterized with exemption ENCFF257TDA bam alignments ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF213TBR, ENCFF807MUK 1845614774 ENCODE Processing Pipeline d6b3d24fdec1c49a8290dee554372ae2 https://www.encodeproject.org/files/ENCFF257TDA/@@download/ENCFF257TDA.bam hg19 released antibody characterized with exemption ENCFF631BPZ bam unfiltered alignments ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF213TBR, ENCFF807MUK 2327921878 ENCODE Processing Pipeline 74e8803e732f005a97c36f783bf2c718 https://www.encodeproject.org/files/ENCFF631BPZ/@@download/ENCFF631BPZ.bam hg19 released antibody characterized with exemption ENCFF438WBW bam alignments ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF213TBR, ENCFF643CGH 1847116122 ENCODE Processing Pipeline 5c39879adc866f23496d0e6edd677c95 https://www.encodeproject.org/files/ENCFF438WBW/@@download/ENCFF438WBW.bam GRCh38 released antibody characterized with exemption ENCFF221NHN bam alignments ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF493APP, ENCFF643CGH 1686042558 ENCODE Processing Pipeline 4a885d7cfebc1bb4caa151350d8dc881 https://www.encodeproject.org/files/ENCFF221NHN/@@download/ENCFF221NHN.bam GRCh38 released antibody characterized with exemption ENCFF749AGZ bam alignments ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF493APP, ENCFF807MUK 1684587174 ENCODE Processing Pipeline 0e3e88a36691631833c877b39126beae https://www.encodeproject.org/files/ENCFF749AGZ/@@download/ENCFF749AGZ.bam hg19 released antibody characterized with exemption ENCFF695NQS bigWig signal p-value ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF438WBW 647757811 ENCODE Processing Pipeline b64610afb5ca07b5007b43d511290fa3 https://www.encodeproject.org/files/ENCFF695NQS/@@download/ENCFF695NQS.bigWig GRCh38 released antibody characterized with exemption ENCFF633JNF bigWig signal p-value ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF221NHN 599407994 ENCODE Processing Pipeline eb2af68775660d90e761af038f9d8021 https://www.encodeproject.org/files/ENCFF633JNF/@@download/ENCFF633JNF.bigWig GRCh38 released antibody characterized with exemption ENCFF703MVX bigWig signal p-value ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF221NHN, ENCFF438WBW 611547948 ENCODE Processing Pipeline 69933c56438e8cc6b3469e08a6fa8e15 https://www.encodeproject.org/files/ENCFF703MVX/@@download/ENCFF703MVX.bigWig GRCh38 released antibody characterized with exemption ENCFF287DEY bigWig fold change over control ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF221NHN 572603693 ENCODE Processing Pipeline 142dc44e7dc14ee4d20323ff91477db9 https://www.encodeproject.org/files/ENCFF287DEY/@@download/ENCFF287DEY.bigWig GRCh38 released antibody characterized with exemption ENCFF212QLU bigWig fold change over control ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF438WBW 617620947 ENCODE Processing Pipeline 85321bcb890b065524c8f2081552d9c5 https://www.encodeproject.org/files/ENCFF212QLU/@@download/ENCFF212QLU.bigWig GRCh38 released antibody characterized with exemption ENCFF456DQX bigBed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF976CEN 13118517 ENCODE Processing Pipeline aede8d01acf64defdd813e6a961e9fc1 https://www.encodeproject.org/files/ENCFF456DQX/@@download/ENCFF456DQX.bigBed GRCh38 released antibody characterized with exemption ENCFF935HCT bigBed narrowPeak conservative idr thresholded peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF132YJB 376451 ENCODE Processing Pipeline 2d50fdb855279ec3569f66074e8ab0a2 https://www.encodeproject.org/files/ENCFF935HCT/@@download/ENCFF935HCT.bigBed GRCh38 released antibody characterized with exemption ENCFF569VMP bed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF438WBW 5946519 ENCODE Processing Pipeline b8ccd6d786e4abdc325601da1dfdba33 https://www.encodeproject.org/files/ENCFF569VMP/@@download/ENCFF569VMP.bed.gz GRCh38 released antibody characterized with exemption ENCFF132YJB bed narrowPeak conservative idr thresholded peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF317BYR, ENCFF419RSJ, ENCFF569VMP, ENCFF976CEN 181606 ENCODE Processing Pipeline 09eba94d27bc896e3c95632819c8ce90 https://www.encodeproject.org/files/ENCFF132YJB/@@download/ENCFF132YJB.bed.gz GRCh38 released antibody characterized with exemption ENCFF317BYR bed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF221NHN 5891898 ENCODE Processing Pipeline e3399067e8ca20a482d1924063af8710 https://www.encodeproject.org/files/ENCFF317BYR/@@download/ENCFF317BYR.bed.gz GRCh38 released antibody characterized with exemption ENCFF976CEN bed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF221NHN, ENCFF438WBW 6755735 ENCODE Processing Pipeline f3a8934423f406f7e52bd623e8577733 https://www.encodeproject.org/files/ENCFF976CEN/@@download/ENCFF976CEN.bed.gz GRCh38 released antibody characterized with exemption ENCFF707FKN bigBed narrowPeak optimal idr thresholded peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF281KMO 381302 ENCODE Processing Pipeline fcc4140ce500c39f72217c0aa843fea3 https://www.encodeproject.org/files/ENCFF707FKN/@@download/ENCFF707FKN.bigBed GRCh38 released antibody characterized with exemption ENCFF702EUF bigWig fold change over control ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF221NHN, ENCFF438WBW 968763314 ENCODE Processing Pipeline 4f00a9559fc42984c25997cfaf2f0a8b https://www.encodeproject.org/files/ENCFF702EUF/@@download/ENCFF702EUF.bigWig GRCh38 released antibody characterized with exemption ENCFF988NHT bigBed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF569VMP 13091890 ENCODE Processing Pipeline a3ed2fe110218f7be833a29f7c65f6c3 https://www.encodeproject.org/files/ENCFF988NHT/@@download/ENCFF988NHT.bigBed GRCh38 released antibody characterized with exemption ENCFF364HMC bigBed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF317BYR 13281040 ENCODE Processing Pipeline da0de318088b514a4c4c8207f1b0f506 https://www.encodeproject.org/files/ENCFF364HMC/@@download/ENCFF364HMC.bigBed GRCh38 released antibody characterized with exemption ENCFF281KMO bed narrowPeak optimal idr thresholded peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF317BYR, ENCFF419RSJ, ENCFF569VMP, ENCFF976CEN 184064 ENCODE Processing Pipeline 3991be1edd1df07f3eaf05cf43d1c995 https://www.encodeproject.org/files/ENCFF281KMO/@@download/ENCFF281KMO.bed.gz GRCh38 released antibody characterized with exemption ENCFF042VCR bigWig signal p-value ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF749AGZ 1409815533 ENCODE Processing Pipeline 9f2e72aee4e0564ce34cb40e91927273 https://www.encodeproject.org/files/ENCFF042VCR/@@download/ENCFF042VCR.bigWig hg19 released antibody characterized with exemption ENCFF795NBH bigWig signal p-value ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF257TDA 1278467795 ENCODE Processing Pipeline 3161b2586f933b44795e8ce30bcf9171 https://www.encodeproject.org/files/ENCFF795NBH/@@download/ENCFF795NBH.bigWig hg19 released antibody characterized with exemption ENCFF868NAM bigWig signal p-value ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF257TDA, ENCFF749AGZ 1632833974 ENCODE Processing Pipeline 5500b5974429b56ad93f1e0520fd6d1a https://www.encodeproject.org/files/ENCFF868NAM/@@download/ENCFF868NAM.bigWig hg19 released antibody characterized with exemption ENCFF673VKR bigWig fold change over control ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF749AGZ 1051095662 ENCODE Processing Pipeline a747b3c82d7c4435612b487ea17f310f https://www.encodeproject.org/files/ENCFF673VKR/@@download/ENCFF673VKR.bigWig hg19 released antibody characterized with exemption ENCFF251OUD bigWig fold change over control ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF257TDA, ENCFF749AGZ 1586051095 ENCODE Processing Pipeline a627cc0d771a27b159eed3a2e87fc231 https://www.encodeproject.org/files/ENCFF251OUD/@@download/ENCFF251OUD.bigWig hg19 released antibody characterized with exemption ENCFF068OLO bigWig fold change over control ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF257TDA 1123989982 ENCODE Processing Pipeline 5a3f389f2317cd1a7fe15705835e3b99 https://www.encodeproject.org/files/ENCFF068OLO/@@download/ENCFF068OLO.bigWig hg19 released antibody characterized with exemption ENCFF257NTY bed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF257TDA 6739981 ENCODE Processing Pipeline 3f0a7592b6ffcfa92d2df40bab24c6ef https://www.encodeproject.org/files/ENCFF257NTY/@@download/ENCFF257NTY.bed.gz hg19 released antibody characterized with exemption ENCFF922DWF bed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF257TDA, ENCFF749AGZ 7057501 ENCODE Processing Pipeline 45d851ecd3ba8303dc5e47124e4a0e70 https://www.encodeproject.org/files/ENCFF922DWF/@@download/ENCFF922DWF.bed.gz hg19 released antibody characterized with exemption ENCFF923IQR bigBed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF827WKX 13320851 ENCODE Processing Pipeline 99d433e848da97d3dea5d6fae04cebfd https://www.encodeproject.org/files/ENCFF923IQR/@@download/ENCFF923IQR.bigBed hg19 released antibody characterized with exemption ENCFF827WKX bed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF749AGZ 6575494 ENCODE Processing Pipeline 70cf963599a4067dd0af68d639846f8b https://www.encodeproject.org/files/ENCFF827WKX/@@download/ENCFF827WKX.bed.gz hg19 released antibody characterized with exemption ENCFF057MON bed narrowPeak optimal idr thresholded peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF257NTY, ENCFF827WKX, ENCFF922DWF 165137 ENCODE Processing Pipeline c9f063add4945005f635fff52fb8f507 https://www.encodeproject.org/files/ENCFF057MON/@@download/ENCFF057MON.bed.gz hg19 released antibody characterized with exemption ENCFF744NWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF057MON 363687 ENCODE Processing Pipeline d130612e079506ba689de484e6b70cbc https://www.encodeproject.org/files/ENCFF744NWJ/@@download/ENCFF744NWJ.bigBed hg19 released antibody characterized with exemption ENCFF063ORV bigBed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF922DWF 13093184 ENCODE Processing Pipeline 552ef447431ad21f196bf31868ac6638 https://www.encodeproject.org/files/ENCFF063ORV/@@download/ENCFF063ORV.bigBed hg19 released antibody characterized with exemption ENCFF922ZVG bigBed narrowPeak peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF257NTY 13115961 ENCODE Processing Pipeline 88cf288de04c4376e5b87072674f7a75 https://www.encodeproject.org/files/ENCFF922ZVG/@@download/ENCFF922ZVG.bigBed hg19 released antibody characterized with exemption ENCFF955RFS bed narrowPeak conservative idr thresholded peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF257NTY, ENCFF827WKX, ENCFF922DWF 161766 ENCODE Processing Pipeline a709e21cf01f973f2242dd77eb70524b https://www.encodeproject.org/files/ENCFF955RFS/@@download/ENCFF955RFS.bed.gz hg19 released antibody characterized with exemption ENCFF012JPN bigBed narrowPeak conservative idr thresholded peaks ENCSR487CPI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP64-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF955RFS 358459 ENCODE Processing Pipeline 260e5f890ede49337626b99c1fc0a35a https://www.encodeproject.org/files/ENCFF012JPN/@@download/ENCFF012JPN.bigBed hg19 released antibody characterized with exemption ENCFF170AOL fastq reads ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1282048117 Richard Myers, HAIB 7f74bb12c2f6f5aa6d2d2f01f4513554 SRA:SRR5331426 https://www.encodeproject.org/files/ENCFF170AOL/@@download/ENCFF170AOL.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF149FLF fastq reads ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1335946409 Richard Myers, HAIB 3f64b7ee701985595753036282fd10d5 SRA:SRR5331427 https://www.encodeproject.org/files/ENCFF149FLF/@@download/ENCFF149FLF.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF504FEY bam unfiltered alignments ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF170AOL, ENCFF807MUK 1514031915 ENCODE Processing Pipeline bc6a5dd78b0f360cf17a3942474251cd https://www.encodeproject.org/files/ENCFF504FEY/@@download/ENCFF504FEY.bam hg19 released antibody characterized with exemption ENCFF517DLT bam unfiltered alignments ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF149FLF, ENCFF807MUK 1537077753 ENCODE Processing Pipeline f2d034c00a2135aa8ea69fb94a686548 https://www.encodeproject.org/files/ENCFF517DLT/@@download/ENCFF517DLT.bam hg19 released antibody characterized with exemption ENCFF238YWI bam unfiltered alignments ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF170AOL, ENCFF643CGH 1517192822 ENCODE Processing Pipeline 3a946a6954d12feeeeed6eb2a7744b05 https://www.encodeproject.org/files/ENCFF238YWI/@@download/ENCFF238YWI.bam GRCh38 released antibody characterized with exemption ENCFF627NHL bam unfiltered alignments ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF149FLF, ENCFF643CGH 1539972244 ENCODE Processing Pipeline 3fb795fbcbb1d1dd0d0f5ec5995999d0 https://www.encodeproject.org/files/ENCFF627NHL/@@download/ENCFF627NHL.bam GRCh38 released antibody characterized with exemption ENCFF431XUQ bam alignments ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF170AOL, ENCFF643CGH 1138828617 ENCODE Processing Pipeline db178e0d8dd1eb4470e8f6251e0a6ae0 https://www.encodeproject.org/files/ENCFF431XUQ/@@download/ENCFF431XUQ.bam GRCh38 released antibody characterized with exemption ENCFF176ZRH bam alignments ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF170AOL, ENCFF807MUK 1138189694 ENCODE Processing Pipeline e7718ca50b5a77a3d9b9fd12e46f861f https://www.encodeproject.org/files/ENCFF176ZRH/@@download/ENCFF176ZRH.bam hg19 released antibody characterized with exemption ENCFF380CUY bam alignments ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF149FLF, ENCFF807MUK 1123743199 ENCODE Processing Pipeline 37bd780e62fd059ff472bb9d80d6ffb1 https://www.encodeproject.org/files/ENCFF380CUY/@@download/ENCFF380CUY.bam hg19 released antibody characterized with exemption ENCFF847EMM bam alignments ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF149FLF, ENCFF643CGH 1124266267 ENCODE Processing Pipeline 1d4b185eb44c70d0fbc3b32d0048dbdb https://www.encodeproject.org/files/ENCFF847EMM/@@download/ENCFF847EMM.bam GRCh38 released antibody characterized with exemption ENCFF858GVY bigWig signal p-value ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF431XUQ 599035861 ENCODE Processing Pipeline a4e869f79eba3dce5f633ff4b3700bb5 https://www.encodeproject.org/files/ENCFF858GVY/@@download/ENCFF858GVY.bigWig GRCh38 released antibody characterized with exemption ENCFF658UDW bigWig signal p-value ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF431XUQ, ENCFF847EMM 674086564 ENCODE Processing Pipeline 9832f1096eb713ecec1beabd6d9bcdd8 https://www.encodeproject.org/files/ENCFF658UDW/@@download/ENCFF658UDW.bigWig GRCh38 released antibody characterized with exemption ENCFF984KOZ bigWig signal p-value ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF847EMM 500046226 ENCODE Processing Pipeline edb5d5f17b4c5ad15042ae123730b966 https://www.encodeproject.org/files/ENCFF984KOZ/@@download/ENCFF984KOZ.bigWig GRCh38 released antibody characterized with exemption ENCFF675AAN bigWig fold change over control ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF431XUQ 464655415 ENCODE Processing Pipeline 12511a47ef41a77d01e235bb1cfeaccc https://www.encodeproject.org/files/ENCFF675AAN/@@download/ENCFF675AAN.bigWig GRCh38 released antibody characterized with exemption ENCFF272BDX bigWig fold change over control ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF847EMM 456515708 ENCODE Processing Pipeline 1353ec6b7172f07e6718429fefa23737 https://www.encodeproject.org/files/ENCFF272BDX/@@download/ENCFF272BDX.bigWig GRCh38 released antibody characterized with exemption ENCFF277QPV bigWig fold change over control ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF431XUQ, ENCFF847EMM 769901030 ENCODE Processing Pipeline 5dad4c4b56beb4970a3ea1ad718ee3fa https://www.encodeproject.org/files/ENCFF277QPV/@@download/ENCFF277QPV.bigWig GRCh38 released antibody characterized with exemption ENCFF401OCK bed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF431XUQ 5593968 ENCODE Processing Pipeline d3786f493fc3cc86348bfba396dce1ea https://www.encodeproject.org/files/ENCFF401OCK/@@download/ENCFF401OCK.bed.gz GRCh38 released antibody characterized with exemption ENCFF415HVP bed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF847EMM 5811808 ENCODE Processing Pipeline 4a25720b2f2fa11e35d1b7fbc3e9fd42 https://www.encodeproject.org/files/ENCFF415HVP/@@download/ENCFF415HVP.bed.gz GRCh38 released antibody characterized with exemption ENCFF419DHT bed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF431XUQ, ENCFF847EMM 6368970 ENCODE Processing Pipeline 8c906d8464dbae9094eea00c9ca1bd41 https://www.encodeproject.org/files/ENCFF419DHT/@@download/ENCFF419DHT.bed.gz GRCh38 released antibody characterized with exemption ENCFF147HIB bigBed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF415HVP 13212342 ENCODE Processing Pipeline 610ab48a4a185652361912d7e320aff0 https://www.encodeproject.org/files/ENCFF147HIB/@@download/ENCFF147HIB.bigBed GRCh38 released antibody characterized with exemption ENCFF838KWS bigBed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF401OCK 13146297 ENCODE Processing Pipeline 280e835a5a52d524f976e440a43fd0bb https://www.encodeproject.org/files/ENCFF838KWS/@@download/ENCFF838KWS.bigBed GRCh38 released antibody characterized with exemption ENCFF261IYR bigBed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419DHT 13260306 ENCODE Processing Pipeline 8d01e1f2639c0563160311f7cccd87c0 https://www.encodeproject.org/files/ENCFF261IYR/@@download/ENCFF261IYR.bigBed GRCh38 released antibody characterized with exemption ENCFF928SXE bed narrowPeak conservative idr thresholded peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF401OCK, ENCFF415HVP, ENCFF419DHT, ENCFF419RSJ 611892 ENCODE Processing Pipeline 12930fab3c0bacbfbc1b6ad2efbc1277 https://www.encodeproject.org/files/ENCFF928SXE/@@download/ENCFF928SXE.bed.gz GRCh38 released antibody characterized with exemption ENCFF278ZNM bed narrowPeak optimal idr thresholded peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF401OCK, ENCFF415HVP, ENCFF419DHT, ENCFF419RSJ 671510 ENCODE Processing Pipeline 7e0159e6c6504797c7230c5d87b288a3 https://www.encodeproject.org/files/ENCFF278ZNM/@@download/ENCFF278ZNM.bed.gz GRCh38 released antibody characterized with exemption ENCFF966HEA bigBed narrowPeak conservative idr thresholded peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF928SXE 1231763 ENCODE Processing Pipeline d8d104b2e962fc93d07217493643f919 https://www.encodeproject.org/files/ENCFF966HEA/@@download/ENCFF966HEA.bigBed GRCh38 released antibody characterized with exemption ENCFF246YII bigBed narrowPeak optimal idr thresholded peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF278ZNM 1322962 ENCODE Processing Pipeline f4f4c5b637edfb60def53eb277fdfaf4 https://www.encodeproject.org/files/ENCFF246YII/@@download/ENCFF246YII.bigBed GRCh38 released antibody characterized with exemption ENCFF219HSO bigWig signal p-value ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF176ZRH, ENCFF203ABR 1180744500 ENCODE Processing Pipeline fc358e76b46a85fa6aead59d7cac6838 https://www.encodeproject.org/files/ENCFF219HSO/@@download/ENCFF219HSO.bigWig hg19 released antibody characterized with exemption ENCFF523UVW bigWig signal p-value ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF380CUY 1180758933 ENCODE Processing Pipeline d897a99a8071b496fe29bed11739f6c1 https://www.encodeproject.org/files/ENCFF523UVW/@@download/ENCFF523UVW.bigWig hg19 released antibody characterized with exemption ENCFF232ESW bigWig fold change over control ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF176ZRH, ENCFF203ABR 891046002 ENCODE Processing Pipeline 59dc7fa5e261044b07c1229aff1f9bab https://www.encodeproject.org/files/ENCFF232ESW/@@download/ENCFF232ESW.bigWig hg19 released antibody characterized with exemption ENCFF568BWK bigWig signal p-value ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF176ZRH, ENCFF203ABR, ENCFF380CUY 1407967500 ENCODE Processing Pipeline c2c90899fe825616027b1b247949d7e4 https://www.encodeproject.org/files/ENCFF568BWK/@@download/ENCFF568BWK.bigWig hg19 released antibody characterized with exemption ENCFF421LRM bigWig fold change over control ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF380CUY 852033215 ENCODE Processing Pipeline 55bf2e614ae79a60ee7b54174c5d3717 https://www.encodeproject.org/files/ENCFF421LRM/@@download/ENCFF421LRM.bigWig hg19 released antibody characterized with exemption ENCFF142JQU bigWig fold change over control ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF176ZRH, ENCFF203ABR, ENCFF380CUY 1347322501 ENCODE Processing Pipeline aad97c745c9be94e2a5729bd56fef659 https://www.encodeproject.org/files/ENCFF142JQU/@@download/ENCFF142JQU.bigWig hg19 released antibody characterized with exemption ENCFF716YYO bed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF380CUY 6163098 ENCODE Processing Pipeline 07dd9cd1f5045e0f059d031de28cae46 https://www.encodeproject.org/files/ENCFF716YYO/@@download/ENCFF716YYO.bed.gz hg19 released antibody characterized with exemption ENCFF918LPX bed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF176ZRH, ENCFF203ABR 6209851 ENCODE Processing Pipeline 3c4914186e9741b352e5e1a081c4b8c2 https://www.encodeproject.org/files/ENCFF918LPX/@@download/ENCFF918LPX.bed.gz hg19 released antibody characterized with exemption ENCFF045CXK bed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF176ZRH, ENCFF203ABR, ENCFF380CUY 6677123 ENCODE Processing Pipeline ebc0878a0ec4de16519ceeb265b66bf6 https://www.encodeproject.org/files/ENCFF045CXK/@@download/ENCFF045CXK.bed.gz hg19 released antibody characterized with exemption ENCFF616UPI bigBed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF716YYO 12995416 ENCODE Processing Pipeline 51ed136fc76271dbecd05049824e598f https://www.encodeproject.org/files/ENCFF616UPI/@@download/ENCFF616UPI.bigBed hg19 released antibody characterized with exemption ENCFF602FLN bigBed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF045CXK 13162431 ENCODE Processing Pipeline d772defde727b3d48f8792b3b31fd8d4 https://www.encodeproject.org/files/ENCFF602FLN/@@download/ENCFF602FLN.bigBed hg19 released antibody characterized with exemption ENCFF245HZT bigBed narrowPeak peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF918LPX 13223716 ENCODE Processing Pipeline 67abaf085b0b49c9c8932b752fcfddc0 https://www.encodeproject.org/files/ENCFF245HZT/@@download/ENCFF245HZT.bigBed hg19 released antibody characterized with exemption ENCFF455XOE bed narrowPeak conservative idr thresholded peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF045CXK, ENCFF716YYO, ENCFF918LPX 606493 ENCODE Processing Pipeline 71a496bf1afac74724d68c6f13b49208 https://www.encodeproject.org/files/ENCFF455XOE/@@download/ENCFF455XOE.bed.gz hg19 released antibody characterized with exemption ENCFF823USP bed narrowPeak optimal idr thresholded peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF045CXK, ENCFF716YYO, ENCFF918LPX 653855 ENCODE Processing Pipeline e3e569c9f86d208e4facdfad87406b48 https://www.encodeproject.org/files/ENCFF823USP/@@download/ENCFF823USP.bed.gz hg19 released antibody characterized with exemption ENCFF709NBJ bigBed narrowPeak conservative idr thresholded peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF455XOE 1265980 ENCODE Processing Pipeline 52770844f709a73fe54872a6c5ea56a8 https://www.encodeproject.org/files/ENCFF709NBJ/@@download/ENCFF709NBJ.bigBed hg19 released antibody characterized with exemption ENCFF452FPL bigBed narrowPeak optimal idr thresholded peaks ENCSR201GGK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIL3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF823USP 1337275 ENCODE Processing Pipeline a53599f4f268c59adc889bc322f8f66b https://www.encodeproject.org/files/ENCFF452FPL/@@download/ENCFF452FPL.bigBed hg19 released antibody characterized with exemption ENCFF268REE fastq reads ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1483921770 Richard Myers, HAIB a7b86b36c6ada5de37dc748364d95a26 SRA:SRR5339606 https://www.encodeproject.org/files/ENCFF268REE/@@download/ENCFF268REE.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF482RBF fastq reads ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1235831575 Richard Myers, HAIB f3649783e9f1d1df41ec49dbd3f1e325 SRA:SRR5339605 https://www.encodeproject.org/files/ENCFF482RBF/@@download/ENCFF482RBF.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF177GEH bam unfiltered alignments ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF268REE, ENCFF643CGH 1454485756 ENCODE Processing Pipeline 0e51bb7817cbed27a76710e2bc7f4f3b https://www.encodeproject.org/files/ENCFF177GEH/@@download/ENCFF177GEH.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF939QRF bam unfiltered alignments ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF482RBF, ENCFF807MUK 1251844970 ENCODE Processing Pipeline 4dbb1aa2d5da7871d213fae85f17e46a https://www.encodeproject.org/files/ENCFF939QRF/@@download/ENCFF939QRF.bam hg19 released antibody characterized with exemption, low read depth ENCFF473VCY bam unfiltered alignments ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF268REE, ENCFF807MUK 1452812203 ENCODE Processing Pipeline e3b5babe68940cd306b85fb222e2fb6c https://www.encodeproject.org/files/ENCFF473VCY/@@download/ENCFF473VCY.bam hg19 released antibody characterized with exemption, low read depth ENCFF647QVM bam unfiltered alignments ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF482RBF, ENCFF643CGH 1253543226 ENCODE Processing Pipeline fd257d78a9ea110e0454a744eb145a5a https://www.encodeproject.org/files/ENCFF647QVM/@@download/ENCFF647QVM.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF340WWW bam alignments ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF482RBF, ENCFF643CGH 973760622 ENCODE Processing Pipeline 1f453303a38ce206800610c9415c39f1 https://www.encodeproject.org/files/ENCFF340WWW/@@download/ENCFF340WWW.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF244QRT bam alignments ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF482RBF, ENCFF807MUK 973556139 ENCODE Processing Pipeline af4d126ddad40bc2b0b26e0c8f8c5cdd https://www.encodeproject.org/files/ENCFF244QRT/@@download/ENCFF244QRT.bam hg19 released antibody characterized with exemption, low read depth ENCFF706WAT bam alignments ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF268REE, ENCFF807MUK 1051364467 ENCODE Processing Pipeline 9023fed389e469cd522209e4cad839cd https://www.encodeproject.org/files/ENCFF706WAT/@@download/ENCFF706WAT.bam hg19 released antibody characterized with exemption, low read depth ENCFF515TAU bam alignments ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF268REE, ENCFF643CGH 1051584745 ENCODE Processing Pipeline c234494f1ea81faffab704362a47a150 https://www.encodeproject.org/files/ENCFF515TAU/@@download/ENCFF515TAU.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF612YHM bigWig signal p-value ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF340WWW 586595640 ENCODE Processing Pipeline c024a9de62c22fd8793c65749bd0c36c https://www.encodeproject.org/files/ENCFF612YHM/@@download/ENCFF612YHM.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF617ELJ bigWig signal p-value ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF515TAU 520931481 ENCODE Processing Pipeline 1537fc90bd616f2a00d0606c052b93be https://www.encodeproject.org/files/ENCFF617ELJ/@@download/ENCFF617ELJ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF960LYC bigWig fold change over control ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF515TAU 403919981 ENCODE Processing Pipeline 16853b96e462b4b3f7b2ff6901d7edfb https://www.encodeproject.org/files/ENCFF960LYC/@@download/ENCFF960LYC.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF392JHQ bigWig signal p-value ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF340WWW, ENCFF515TAU 626674339 ENCODE Processing Pipeline 3cf8aaab8f6a0eb18a661d36af54b936 https://www.encodeproject.org/files/ENCFF392JHQ/@@download/ENCFF392JHQ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF534XZR bigWig fold change over control ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF340WWW 393994613 ENCODE Processing Pipeline e079acd8206454627d612e330d289c4c https://www.encodeproject.org/files/ENCFF534XZR/@@download/ENCFF534XZR.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF549MBZ bigWig fold change over control ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF340WWW, ENCFF515TAU 666558876 ENCODE Processing Pipeline d5522b7ea692ad08884e082dd2400775 https://www.encodeproject.org/files/ENCFF549MBZ/@@download/ENCFF549MBZ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF670ZZL bed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF515TAU 6163801 ENCODE Processing Pipeline 524794d680eb805e3f08cba8fdc326bf https://www.encodeproject.org/files/ENCFF670ZZL/@@download/ENCFF670ZZL.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF454INC bigBed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF670ZZL 12645222 ENCODE Processing Pipeline 7748002b42901e9b7fca581a77db725a https://www.encodeproject.org/files/ENCFF454INC/@@download/ENCFF454INC.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF279RBI bed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF340WWW 6267493 ENCODE Processing Pipeline 64b4acf935d572bbf81a0482d78d75bc https://www.encodeproject.org/files/ENCFF279RBI/@@download/ENCFF279RBI.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF517IJC bed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF340WWW, ENCFF515TAU 6713748 ENCODE Processing Pipeline a4d07aec3065571d0a73b7b6efcf7077 https://www.encodeproject.org/files/ENCFF517IJC/@@download/ENCFF517IJC.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF372IZW bigBed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF279RBI 12582850 ENCODE Processing Pipeline 5baa9b46e5bfe5157001fb175cf20451 https://www.encodeproject.org/files/ENCFF372IZW/@@download/ENCFF372IZW.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF189NTN bed narrowPeak conservative idr thresholded peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF279RBI, ENCFF419RSJ, ENCFF517IJC, ENCFF670ZZL 1124229 ENCODE Processing Pipeline 50eb3a87ba2c4e8f9f5b156abb3e97fa https://www.encodeproject.org/files/ENCFF189NTN/@@download/ENCFF189NTN.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF404MAS bigBed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF517IJC 12697841 ENCODE Processing Pipeline e83ec826f666bf352324726927ad62ce https://www.encodeproject.org/files/ENCFF404MAS/@@download/ENCFF404MAS.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF557UNV bigBed narrowPeak optimal idr thresholded peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF430RKX 2349074 ENCODE Processing Pipeline 0a4f60594bc63cb8ac446d3bcd760653 https://www.encodeproject.org/files/ENCFF557UNV/@@download/ENCFF557UNV.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF430RKX bed narrowPeak optimal idr thresholded peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF279RBI, ENCFF419RSJ, ENCFF517IJC, ENCFF670ZZL 1166851 ENCODE Processing Pipeline 2d58b5893f635c8976fe5fe574bb7fb6 https://www.encodeproject.org/files/ENCFF430RKX/@@download/ENCFF430RKX.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF562QEA bigBed narrowPeak conservative idr thresholded peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF189NTN 2280426 ENCODE Processing Pipeline 18a7dbe3038190dce0a5350afad19b15 https://www.encodeproject.org/files/ENCFF562QEA/@@download/ENCFF562QEA.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF516YGF bigWig signal p-value ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF706WAT 1157071739 ENCODE Processing Pipeline 48bf36b9c03018ed99d16246791120ce https://www.encodeproject.org/files/ENCFF516YGF/@@download/ENCFF516YGF.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF261BVB bigWig signal p-value ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF244QRT 1254553560 ENCODE Processing Pipeline 6a9c57741ada7bc9bb25976694ba5424 https://www.encodeproject.org/files/ENCFF261BVB/@@download/ENCFF261BVB.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF309ZRM bigWig signal p-value ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF244QRT, ENCFF706WAT 1459264475 ENCODE Processing Pipeline 77097e0799a31cc638523402026e9dfa https://www.encodeproject.org/files/ENCFF309ZRM/@@download/ENCFF309ZRM.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF259YPS bigWig fold change over control ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF706WAT 743457399 ENCODE Processing Pipeline eb281b6f14f9160dc4f5476b2a8df1f0 https://www.encodeproject.org/files/ENCFF259YPS/@@download/ENCFF259YPS.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF790ETM bigWig fold change over control ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF244QRT 727197397 ENCODE Processing Pipeline a93dcdbbd8f8cad86f22045b45d5654c https://www.encodeproject.org/files/ENCFF790ETM/@@download/ENCFF790ETM.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF846DFV bigWig fold change over control ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF244QRT, ENCFF706WAT 1152983825 ENCODE Processing Pipeline 7f52d4969f04478cd274fc878655c959 https://www.encodeproject.org/files/ENCFF846DFV/@@download/ENCFF846DFV.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF190UUO bed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF706WAT 6526727 ENCODE Processing Pipeline 963237eb997213e3cad8566da10d8d4a https://www.encodeproject.org/files/ENCFF190UUO/@@download/ENCFF190UUO.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF848YTC bed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF244QRT 6564830 ENCODE Processing Pipeline 9a3e968041c1b1c1d3e083e7e0033939 https://www.encodeproject.org/files/ENCFF848YTC/@@download/ENCFF848YTC.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF440NXD bigBed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF190UUO 12636748 ENCODE Processing Pipeline e1910d464ba346ad2d976f68cc2e7820 https://www.encodeproject.org/files/ENCFF440NXD/@@download/ENCFF440NXD.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF121PMC bed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF244QRT, ENCFF706WAT 6877229 ENCODE Processing Pipeline 4ed416261a2fdf4da08b85e75e47eb8d https://www.encodeproject.org/files/ENCFF121PMC/@@download/ENCFF121PMC.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF761DSU bigBed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF848YTC 12452190 ENCODE Processing Pipeline b237a6a9da739bdd5494095bf8e2a499 https://www.encodeproject.org/files/ENCFF761DSU/@@download/ENCFF761DSU.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF506KOD bigBed narrowPeak peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF121PMC 12607957 ENCODE Processing Pipeline 0bf58f3fc3894364b3e6ed05cbb3196c https://www.encodeproject.org/files/ENCFF506KOD/@@download/ENCFF506KOD.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF295TJG bed narrowPeak optimal idr thresholded peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF121PMC, ENCFF190UUO, ENCFF848YTC 1213040 ENCODE Processing Pipeline 7dbde427a24bcdfb4c7254eecd81f278 https://www.encodeproject.org/files/ENCFF295TJG/@@download/ENCFF295TJG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF729ARL bed narrowPeak conservative idr thresholded peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF121PMC, ENCFF190UUO, ENCFF848YTC 1163314 ENCODE Processing Pipeline 64c6a212df45c4b8324553d8af9b7977 https://www.encodeproject.org/files/ENCFF729ARL/@@download/ENCFF729ARL.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF314KOU bigBed narrowPeak conservative idr thresholded peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF729ARL 2312085 ENCODE Processing Pipeline 5a7a2aeff618e2ad0db234af026fd282 https://www.encodeproject.org/files/ENCFF314KOU/@@download/ENCFF314KOU.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF094DPP bigBed narrowPeak optimal idr thresholded peaks ENCSR959OMS ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SAP130-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF295TJG 2393353 ENCODE Processing Pipeline 4f66c51ae175b020328e4788b18ecf1c https://www.encodeproject.org/files/ENCFF094DPP/@@download/ENCFF094DPP.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF784EQQ fastq reads ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1873783381 Richard Myers, HAIB 19d276ae0c5f7ff6592e598356a7ea29 SRA:SRR5331451 https://www.encodeproject.org/files/ENCFF784EQQ/@@download/ENCFF784EQQ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF908GXH fastq reads ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2081808087 Richard Myers, HAIB 119cfd62385de3ebece2675951ebd71b SRA:SRR5331452 https://www.encodeproject.org/files/ENCFF908GXH/@@download/ENCFF908GXH.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF590MFY bam unfiltered alignments ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF908GXH 2360535446 ENCODE Processing Pipeline 00c7dfeb55bbebcadda5463d32bfeb0a https://www.encodeproject.org/files/ENCFF590MFY/@@download/ENCFF590MFY.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF118WFV bam unfiltered alignments ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF784EQQ 2200189924 ENCODE Processing Pipeline b65dc544c1be82b89b1eae3836f07f7e https://www.encodeproject.org/files/ENCFF118WFV/@@download/ENCFF118WFV.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF079KMF bam unfiltered alignments ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF784EQQ, ENCFF807MUK 2194176679 ENCODE Processing Pipeline 4c06691d4021710a1c3ca2a74dd31d50 https://www.encodeproject.org/files/ENCFF079KMF/@@download/ENCFF079KMF.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF664VVG bam unfiltered alignments ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF908GXH 2365767587 ENCODE Processing Pipeline 2c62e47d3ef69ad80d8f203b2102f234 https://www.encodeproject.org/files/ENCFF664VVG/@@download/ENCFF664VVG.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF290GQR bam alignments ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF784EQQ 1711479022 ENCODE Processing Pipeline 4bff585d0d380d3dd1a4b27cea964fa6 https://www.encodeproject.org/files/ENCFF290GQR/@@download/ENCFF290GQR.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF369RCJ bam alignments ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF784EQQ, ENCFF807MUK 1710160872 ENCODE Processing Pipeline 23bc8dd0b9399b4646c9c0e2acea7a92 https://www.encodeproject.org/files/ENCFF369RCJ/@@download/ENCFF369RCJ.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF778TOE bam alignments ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF908GXH 1794815302 ENCODE Processing Pipeline de64af9df234476a37160412d7f760dd https://www.encodeproject.org/files/ENCFF778TOE/@@download/ENCFF778TOE.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF109RLL bam alignments ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF908GXH 1795598977 ENCODE Processing Pipeline 0d812476bf5d5c717d998f693d758b21 https://www.encodeproject.org/files/ENCFF109RLL/@@download/ENCFF109RLL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF731ION bigWig signal p-value ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF109RLL 668889682 ENCODE Processing Pipeline 380d7369cab72ebbe4d12e8de984bcb7 https://www.encodeproject.org/files/ENCFF731ION/@@download/ENCFF731ION.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF997SFG bigWig signal p-value ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF290GQR 623418440 ENCODE Processing Pipeline 7322414890139a0791ceddb39a08ce08 https://www.encodeproject.org/files/ENCFF997SFG/@@download/ENCFF997SFG.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF218WYC bigWig signal p-value ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF109RLL, ENCFF290GQR 655860957 ENCODE Processing Pipeline 253aedf16f0181f6d331c5858813e61c https://www.encodeproject.org/files/ENCFF218WYC/@@download/ENCFF218WYC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF938FCP bigWig fold change over control ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF109RLL 655222049 ENCODE Processing Pipeline 3f19f88d1a58b7771ac56f1abb5259ae https://www.encodeproject.org/files/ENCFF938FCP/@@download/ENCFF938FCP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF161LYV bigWig fold change over control ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF290GQR 599031218 ENCODE Processing Pipeline 18c229a4a7a3fc464a813311cbbb0402 https://www.encodeproject.org/files/ENCFF161LYV/@@download/ENCFF161LYV.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF501PAT bigWig fold change over control ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF109RLL, ENCFF290GQR 1030105541 ENCODE Processing Pipeline ed3624823d1575e19b5306cf46c41702 https://www.encodeproject.org/files/ENCFF501PAT/@@download/ENCFF501PAT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF865HMI bed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF290GQR 5950684 ENCODE Processing Pipeline b132635c921dcb33c7cb9c66c63f06af https://www.encodeproject.org/files/ENCFF865HMI/@@download/ENCFF865HMI.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF756IEC bed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF109RLL 6464717 ENCODE Processing Pipeline a22fed79d3e3672c14c7dd3f1933727e https://www.encodeproject.org/files/ENCFF756IEC/@@download/ENCFF756IEC.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF843NDF bed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF109RLL, ENCFF290GQR 6854653 ENCODE Processing Pipeline dacbfd6947c50ea4fdeea916322cd7db https://www.encodeproject.org/files/ENCFF843NDF/@@download/ENCFF843NDF.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF059QCS bigBed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF865HMI 13214129 ENCODE Processing Pipeline 24bf4f9f54819b532f6c900a6366283f https://www.encodeproject.org/files/ENCFF059QCS/@@download/ENCFF059QCS.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF276OCH bigBed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF756IEC 12991591 ENCODE Processing Pipeline cb4e7800973f23f7464ee30a8ab6d37d https://www.encodeproject.org/files/ENCFF276OCH/@@download/ENCFF276OCH.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF554BEA bigBed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF843NDF 13018549 ENCODE Processing Pipeline 0a9e6ec584ace8a52eb496d08e3d0da7 https://www.encodeproject.org/files/ENCFF554BEA/@@download/ENCFF554BEA.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF695HIB bed narrowPeak conservative idr thresholded peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF756IEC, ENCFF843NDF, ENCFF865HMI 377072 ENCODE Processing Pipeline ebe4769d723cac31de68a7e8d257d6ad https://www.encodeproject.org/files/ENCFF695HIB/@@download/ENCFF695HIB.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF782FTA bigBed narrowPeak conservative idr thresholded peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF695HIB 669202 ENCODE Processing Pipeline 438dc9f54582c065e88dea1147f5b4e3 https://www.encodeproject.org/files/ENCFF782FTA/@@download/ENCFF782FTA.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF926VIT bed narrowPeak optimal idr thresholded peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF756IEC, ENCFF843NDF, ENCFF865HMI 504793 ENCODE Processing Pipeline 6208eb84b17b4b5652435eb841582be0 https://www.encodeproject.org/files/ENCFF926VIT/@@download/ENCFF926VIT.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF154UIR bigBed narrowPeak optimal idr thresholded peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF926VIT 1030805 ENCODE Processing Pipeline ff7d74be84662c47f38d5414c4e906af https://www.encodeproject.org/files/ENCFF154UIR/@@download/ENCFF154UIR.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF556UBP bigWig signal p-value ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF369RCJ 1299431360 ENCODE Processing Pipeline 562b9e20b5267c6e3d1c08ec434cb2b0 https://www.encodeproject.org/files/ENCFF556UBP/@@download/ENCFF556UBP.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF974UOH bigWig signal p-value ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF778TOE 1325453913 ENCODE Processing Pipeline bb22315774ed652b712cf408c6d9a4a3 https://www.encodeproject.org/files/ENCFF974UOH/@@download/ENCFF974UOH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF935KTN bigWig signal p-value ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF369RCJ, ENCFF778TOE 1751822153 ENCODE Processing Pipeline b75735c2a5c8090fd3732961ce5a2d65 https://www.encodeproject.org/files/ENCFF935KTN/@@download/ENCFF935KTN.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF676OIW bigWig fold change over control ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF369RCJ 1083734446 ENCODE Processing Pipeline 3b340bff2f55dea0fc98e5cbd2c82348 https://www.encodeproject.org/files/ENCFF676OIW/@@download/ENCFF676OIW.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF743FCF bigWig fold change over control ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF778TOE 1166405017 ENCODE Processing Pipeline 7a653a90b9f2370f62f69dc7ca59ceeb https://www.encodeproject.org/files/ENCFF743FCF/@@download/ENCFF743FCF.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF496WQN bigWig fold change over control ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF369RCJ, ENCFF778TOE 1695954279 ENCODE Processing Pipeline b1ec2c499c0413b9fb9d099558fb5ad4 https://www.encodeproject.org/files/ENCFF496WQN/@@download/ENCFF496WQN.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF935DLZ bed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF369RCJ 6528624 ENCODE Processing Pipeline f542afd8f9ef41d104caa9c6d1c39220 https://www.encodeproject.org/files/ENCFF935DLZ/@@download/ENCFF935DLZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF483QHT bed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF778TOE 6812213 ENCODE Processing Pipeline 6d477a04bb9cc5498596c59cefd6922a https://www.encodeproject.org/files/ENCFF483QHT/@@download/ENCFF483QHT.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF627RNW bigBed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF935DLZ 13249008 ENCODE Processing Pipeline 3cdf1f3ed89731bd1f202e913a7e2697 https://www.encodeproject.org/files/ENCFF627RNW/@@download/ENCFF627RNW.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF528FVE bed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF369RCJ, ENCFF778TOE 7025592 ENCODE Processing Pipeline 9c2e99b8b110f922e3f27e251fd2cb55 https://www.encodeproject.org/files/ENCFF528FVE/@@download/ENCFF528FVE.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF986CEO bed narrowPeak conservative idr thresholded peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF483QHT, ENCFF528FVE, ENCFF935DLZ 377894 ENCODE Processing Pipeline 8fc2257a90279c749a19a95e22a960fb https://www.encodeproject.org/files/ENCFF986CEO/@@download/ENCFF986CEO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF593NKM bigBed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF483QHT 13005075 ENCODE Processing Pipeline 5c4b232fdc46741fb6e1bbaa4c4dd7d8 https://www.encodeproject.org/files/ENCFF593NKM/@@download/ENCFF593NKM.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF245FCX bigBed narrowPeak peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF528FVE 13043585 ENCODE Processing Pipeline 52ca53554a729be3e676f12e19729799 https://www.encodeproject.org/files/ENCFF245FCX/@@download/ENCFF245FCX.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF601ROG bigBed narrowPeak conservative idr thresholded peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF986CEO 688637 ENCODE Processing Pipeline cff68f979f96d2eb8fc11d32ac309559 https://www.encodeproject.org/files/ENCFF601ROG/@@download/ENCFF601ROG.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF116GAH bed narrowPeak optimal idr thresholded peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF483QHT, ENCFF528FVE, ENCFF935DLZ 489976 ENCODE Processing Pipeline 1ee10f2b1a95191139ba1807d397608f https://www.encodeproject.org/files/ENCFF116GAH/@@download/ENCFF116GAH.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF380CZX bigBed narrowPeak optimal idr thresholded peaks ENCSR226QQM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NFIA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF116GAH 1046623 ENCODE Processing Pipeline 24cedb279fc1fbeb8b614ed21d1446f1 https://www.encodeproject.org/files/ENCFF380CZX/@@download/ENCFF380CZX.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF962UNX fastq reads ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1384711038 Richard Myers, HAIB c375703600524382d58160d905901734 SRA:SRR5339016 https://www.encodeproject.org/files/ENCFF962UNX/@@download/ENCFF962UNX.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF041ESH bam unfiltered alignments ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF962UNX 1636018199 ENCODE Processing Pipeline 5b0034ca604f31ed946542c58ca93a73 https://www.encodeproject.org/files/ENCFF041ESH/@@download/ENCFF041ESH.bam hg19 released antibody characterized with exemption ENCFF192YVA bam unfiltered alignments ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF962UNX 1639004067 ENCODE Processing Pipeline 676ae0431aef33cd12143d595688d043 https://www.encodeproject.org/files/ENCFF192YVA/@@download/ENCFF192YVA.bam GRCh38 released antibody characterized with exemption ENCFF215KQN bam alignments ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF962UNX 1230430796 ENCODE Processing Pipeline 323ba65395e069c81a8f6e96ebbdb887 https://www.encodeproject.org/files/ENCFF215KQN/@@download/ENCFF215KQN.bam hg19 released antibody characterized with exemption ENCFF513QRO bam alignments ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF962UNX 1230948598 ENCODE Processing Pipeline 7e2b584e7ef2edd7f7dce90c29e1a065 https://www.encodeproject.org/files/ENCFF513QRO/@@download/ENCFF513QRO.bam GRCh38 released antibody characterized with exemption ENCFF868BZO fastq reads ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1265886999 Richard Myers, HAIB 16468df07a266392e53ac5c4ae21bfb3 SRA:SRR5339017 https://www.encodeproject.org/files/ENCFF868BZO/@@download/ENCFF868BZO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF045BLR bam unfiltered alignments ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF868BZO 1516968799 ENCODE Processing Pipeline 6d41d1ab5b0d8a9360560edf08ef2885 https://www.encodeproject.org/files/ENCFF045BLR/@@download/ENCFF045BLR.bam hg19 released antibody characterized with exemption ENCFF966PFR bam unfiltered alignments ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF868BZO 1520925712 ENCODE Processing Pipeline 919d0d10762edeb15bd0c849b0924574 https://www.encodeproject.org/files/ENCFF966PFR/@@download/ENCFF966PFR.bam GRCh38 released antibody characterized with exemption ENCFF784EHE bam alignments ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF868BZO 1117600598 ENCODE Processing Pipeline f47b797efb8147cad7ae9b804d1fc3c2 https://www.encodeproject.org/files/ENCFF784EHE/@@download/ENCFF784EHE.bam hg19 released antibody characterized with exemption ENCFF077LTT bam alignments ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF868BZO 1118324790 ENCODE Processing Pipeline 59341c0776ac717c8c21052ae7290e64 https://www.encodeproject.org/files/ENCFF077LTT/@@download/ENCFF077LTT.bam GRCh38 released antibody characterized with exemption ENCFF745CSS bigWig signal p-value ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF077LTT 509822815 ENCODE Processing Pipeline f8da6c546c50d9c09a875abe6be0376b https://www.encodeproject.org/files/ENCFF745CSS/@@download/ENCFF745CSS.bigWig GRCh38 released antibody characterized with exemption ENCFF289UBD bigWig signal p-value ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF513QRO 604590005 ENCODE Processing Pipeline 7f96f9139f5bc9b98376e5c651f0141c https://www.encodeproject.org/files/ENCFF289UBD/@@download/ENCFF289UBD.bigWig GRCh38 released antibody characterized with exemption ENCFF587TLI bigWig signal p-value ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF077LTT, ENCFF513QRO 648302900 ENCODE Processing Pipeline ff7429f21ae60ec8ed80378801e181fe https://www.encodeproject.org/files/ENCFF587TLI/@@download/ENCFF587TLI.bigWig GRCh38 released antibody characterized with exemption ENCFF638BJN bigWig fold change over control ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF077LTT, ENCFF513QRO 730401828 ENCODE Processing Pipeline 627db27d52a0d535b12a9feed4530526 https://www.encodeproject.org/files/ENCFF638BJN/@@download/ENCFF638BJN.bigWig GRCh38 released antibody characterized with exemption ENCFF885GWG bigWig fold change over control ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF077LTT 452566075 ENCODE Processing Pipeline 1ebe9cf2ef09fea706455e2f59449e23 https://www.encodeproject.org/files/ENCFF885GWG/@@download/ENCFF885GWG.bigWig GRCh38 released antibody characterized with exemption ENCFF983TWG bigWig fold change over control ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF513QRO 429095035 ENCODE Processing Pipeline 86abba89b24cfc1a5774c27bf93b166c https://www.encodeproject.org/files/ENCFF983TWG/@@download/ENCFF983TWG.bigWig GRCh38 released antibody characterized with exemption ENCFF580QKB bed narrowPeak peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF077LTT 5713902 ENCODE Processing Pipeline 97fc0893f53be65382f41ca8b3635c8f https://www.encodeproject.org/files/ENCFF580QKB/@@download/ENCFF580QKB.bed.gz GRCh38 released antibody characterized with exemption ENCFF219UYP bed narrowPeak peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF077LTT, ENCFF513QRO 6597910 ENCODE Processing Pipeline 5116e951c15625268f802cbdf169b20b https://www.encodeproject.org/files/ENCFF219UYP/@@download/ENCFF219UYP.bed.gz GRCh38 released antibody characterized with exemption ENCFF579BMX bed narrowPeak peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF513QRO 6076308 ENCODE Processing Pipeline 6e34d1ebb3f8d0081e23b8516608c31f https://www.encodeproject.org/files/ENCFF579BMX/@@download/ENCFF579BMX.bed.gz GRCh38 released antibody characterized with exemption ENCFF625EWP bigBed narrowPeak peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF580QKB 13191544 ENCODE Processing Pipeline e5af479a97bcf72a50292b511a756964 https://www.encodeproject.org/files/ENCFF625EWP/@@download/ENCFF625EWP.bigBed GRCh38 released antibody characterized with exemption ENCFF850RXD bigBed narrowPeak peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF579BMX 13043721 ENCODE Processing Pipeline 2eee37552cc76104116817e9dbc47181 https://www.encodeproject.org/files/ENCFF850RXD/@@download/ENCFF850RXD.bigBed GRCh38 released antibody characterized with exemption ENCFF300FSQ bed narrowPeak conservative idr thresholded peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF219UYP, ENCFF419RSJ, ENCFF579BMX, ENCFF580QKB 216226 ENCODE Processing Pipeline 86c31aac03c800ed9395ee60ad97b331 https://www.encodeproject.org/files/ENCFF300FSQ/@@download/ENCFF300FSQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF456VCT bigBed narrowPeak conservative idr thresholded peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF300FSQ 487117 ENCODE Processing Pipeline 0f68cabe6daf45768457593ca343ed36 https://www.encodeproject.org/files/ENCFF456VCT/@@download/ENCFF456VCT.bigBed GRCh38 released antibody characterized with exemption ENCFF027UTC bed narrowPeak optimal idr thresholded peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF219UYP, ENCFF419RSJ, ENCFF579BMX, ENCFF580QKB 243172 ENCODE Processing Pipeline ebd7961dfbd821c6ea547fc6a2b9c9bf https://www.encodeproject.org/files/ENCFF027UTC/@@download/ENCFF027UTC.bed.gz GRCh38 released antibody characterized with exemption ENCFF486FZB bigBed narrowPeak peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF219UYP 13107628 ENCODE Processing Pipeline 20f416d60be6f5a53bbc0e1994e16dd2 https://www.encodeproject.org/files/ENCFF486FZB/@@download/ENCFF486FZB.bigBed GRCh38 released antibody characterized with exemption ENCFF207SEA bigBed narrowPeak optimal idr thresholded peaks ENCSR586DEH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZFP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF027UTC 537037 ENCODE Processing Pipeline af6161ef8af58a19295b447d3b6bd47f https://www.encodeproject.org/files/ENCFF207SEA/@@download/ENCFF207SEA.bigBed GRCh38 released antibody characterized with exemption ENCFF921JLH fastq reads ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 1 50 single-ended 1751151420 Richard Myers, HAIB c236e7b1991e83290250c7c099833058 SRA:SRR5331525 https://www.encodeproject.org/files/ENCFF921JLH/@@download/ENCFF921JLH.fastq.gz HiSeq 2000 /files/ENCFF929JZL/ released antibody characterized with exemption, low read depth ENCFF350SEQ fastq reads ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 1 50 single-ended 1059310410 Richard Myers, HAIB 767141de59443fc427cb82686098e19f SRA:SRR5331526 https://www.encodeproject.org/files/ENCFF350SEQ/@@download/ENCFF350SEQ.fastq.gz HiSeq 2000 /files/ENCFF929JZL/ released antibody characterized with exemption, low read depth ENCFF214GRW bam unfiltered alignments ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 50 ENCFF350SEQ, ENCFF643CGH 1080345345 ENCODE Processing Pipeline 09347256ac793160e3cf969223e00124 https://www.encodeproject.org/files/ENCFF214GRW/@@download/ENCFF214GRW.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF992GVS bam unfiltered alignments ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 50 ENCFF350SEQ, ENCFF807MUK 1078560503 ENCODE Processing Pipeline 890d9769d1972c9a1c91d7a08098f086 https://www.encodeproject.org/files/ENCFF992GVS/@@download/ENCFF992GVS.bam hg19 released antibody characterized with exemption, low read depth ENCFF185KPG bam unfiltered alignments ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 50 ENCFF807MUK, ENCFF921JLH 1831967389 ENCODE Processing Pipeline 1cdcc441f59dcba9dcad3cfab95f7d4f https://www.encodeproject.org/files/ENCFF185KPG/@@download/ENCFF185KPG.bam hg19 released antibody characterized with exemption, low read depth ENCFF899AJU bam unfiltered alignments ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 50 ENCFF643CGH, ENCFF921JLH 1835538210 ENCODE Processing Pipeline ab031a87d9cb6f82d155b1f1bf85262e https://www.encodeproject.org/files/ENCFF899AJU/@@download/ENCFF899AJU.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF077SLS bam alignments ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 50 ENCFF350SEQ, ENCFF807MUK 787240767 ENCODE Processing Pipeline b7a07710d94c341399003c110a04cb65 https://www.encodeproject.org/files/ENCFF077SLS/@@download/ENCFF077SLS.bam hg19 released antibody characterized with exemption, low read depth ENCFF895OOM bam alignments ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 50 ENCFF350SEQ, ENCFF643CGH 787068594 ENCODE Processing Pipeline bff009d674d57b57f4752f78960998fc https://www.encodeproject.org/files/ENCFF895OOM/@@download/ENCFF895OOM.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF092EIK bam alignments ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 50 ENCFF643CGH, ENCFF921JLH 1257875124 ENCODE Processing Pipeline e5017a41f9b7e81d2cfb35afd9088f44 https://www.encodeproject.org/files/ENCFF092EIK/@@download/ENCFF092EIK.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF012XJU bam alignments ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 50 ENCFF807MUK, ENCFF921JLH 1258126501 ENCODE Processing Pipeline 8caae9c190b52e530dca2aec9073c804 https://www.encodeproject.org/files/ENCFF012XJU/@@download/ENCFF012XJU.bam hg19 released antibody characterized with exemption, low read depth ENCFF888WJV bigWig signal p-value ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 ENCFF092EIK, ENCFF167KVB 482225533 ENCODE Processing Pipeline 9eb807d3ca9c3d94a0b751066ab52a66 https://www.encodeproject.org/files/ENCFF888WJV/@@download/ENCFF888WJV.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF855MUE bigWig signal p-value ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 ENCFF012XJU, ENCFF943PEE 492870668 ENCODE Processing Pipeline cab91331f21138529f8c12c1ba5eea83 https://www.encodeproject.org/files/ENCFF855MUE/@@download/ENCFF855MUE.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF104SOW bigWig signal p-value ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 ENCFF167KVB, ENCFF895OOM 447750635 ENCODE Processing Pipeline 267bb9fa4a772961a6267571c54b6900 https://www.encodeproject.org/files/ENCFF104SOW/@@download/ENCFF104SOW.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF083OFO bigWig fold change over control ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 ENCFF167KVB, ENCFF895OOM 394078112 ENCODE Processing Pipeline 815396c2d269f715ec181943ad93a5d6 https://www.encodeproject.org/files/ENCFF083OFO/@@download/ENCFF083OFO.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF192BGD bigWig fold change over control ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF092EIK, ENCFF167KVB, ENCFF895OOM 698131541 ENCODE Processing Pipeline c1ee4ded1a9ba96f7b324ff68098ab1c https://www.encodeproject.org/files/ENCFF192BGD/@@download/ENCFF192BGD.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF180SMM bed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 ENCFF167KVB, ENCFF895OOM 5402456 ENCODE Processing Pipeline 880151362de313616f4996cb3dacd393 https://www.encodeproject.org/files/ENCFF180SMM/@@download/ENCFF180SMM.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF842FHZ bigBed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 ENCFF305SID 13244330 ENCODE Processing Pipeline 32d9d8ee50b33dd27dac24687236f418 https://www.encodeproject.org/files/ENCFF842FHZ/@@download/ENCFF842FHZ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF617NCB bigBed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF724DWZ 13422239 ENCODE Processing Pipeline 8e74b8722c5ca4f70d379df789d5b3b4 https://www.encodeproject.org/files/ENCFF617NCB/@@download/ENCFF617NCB.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF191PCD bigBed narrowPeak conservative idr thresholded peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF571PSU 920019 ENCODE Processing Pipeline a56aafed62a4a0ce8901aae1ef44c5bc https://www.encodeproject.org/files/ENCFF191PCD/@@download/ENCFF191PCD.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF399XDT bigWig signal p-value ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 ENCFF077SLS, ENCFF943PEE 437579206 ENCODE Processing Pipeline 99090ec622f3d25f5d4bc9e870b46644 https://www.encodeproject.org/files/ENCFF399XDT/@@download/ENCFF399XDT.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF254ROB bed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF012XJU, ENCFF077SLS, ENCFF943PEE 6360415 ENCODE Processing Pipeline 753004b6ae128496d124cd7d4f6c1467 https://www.encodeproject.org/files/ENCFF254ROB/@@download/ENCFF254ROB.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF597VAW bigBed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 ENCFF981TNW 13076355 ENCODE Processing Pipeline 0facc80da170230553ef6f5883e6bf87 https://www.encodeproject.org/files/ENCFF597VAW/@@download/ENCFF597VAW.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF022ZFZ bigWig fold change over control ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 ENCFF077SLS, ENCFF943PEE 396886423 ENCODE Processing Pipeline ab93f7c208317930a4f9750093a9fa1d https://www.encodeproject.org/files/ENCFF022ZFZ/@@download/ENCFF022ZFZ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF167QAZ bigBed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 ENCFF060UON 13240320 ENCODE Processing Pipeline 53f45f2580322f76d6f152007d984d48 https://www.encodeproject.org/files/ENCFF167QAZ/@@download/ENCFF167QAZ.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF571PSU bed narrowPeak conservative idr thresholded peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF060UON, ENCFF254ROB, ENCFF981TNW 435670 ENCODE Processing Pipeline 81220b56844539519bff04e96db16c4a https://www.encodeproject.org/files/ENCFF571PSU/@@download/ENCFF571PSU.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF305SID bed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 ENCFF092EIK, ENCFF167KVB 5875813 ENCODE Processing Pipeline 7912a0ddbe148c9054bee50d5030def9 https://www.encodeproject.org/files/ENCFF305SID/@@download/ENCFF305SID.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF724DWZ bed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF092EIK, ENCFF167KVB, ENCFF895OOM 6360974 ENCODE Processing Pipeline 1e31bdeeacd5cf9e8a76461660fceb43 https://www.encodeproject.org/files/ENCFF724DWZ/@@download/ENCFF724DWZ.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF060UON bed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 ENCFF012XJU, ENCFF943PEE 5878604 ENCODE Processing Pipeline bd67f7069e6e6856ed84be2f0a2f89af https://www.encodeproject.org/files/ENCFF060UON/@@download/ENCFF060UON.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF480DSN bigBed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF254ROB 13417075 ENCODE Processing Pipeline bc3ede8449338c6b772a2d33a0a01e75 https://www.encodeproject.org/files/ENCFF480DSN/@@download/ENCFF480DSN.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF450SOG bed narrowPeak optimal idr thresholded peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF060UON, ENCFF254ROB, ENCFF981TNW 454562 ENCODE Processing Pipeline 97db8e93f9a5aa34a7c3dc136cde0431 https://www.encodeproject.org/files/ENCFF450SOG/@@download/ENCFF450SOG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF855TOS bigBed narrowPeak optimal idr thresholded peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF450SOG 949119 ENCODE Processing Pipeline 40cfcfb1ef354369d238f0d5c1265fd8 https://www.encodeproject.org/files/ENCFF855TOS/@@download/ENCFF855TOS.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF716RLN bigWig signal p-value ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF012XJU, ENCFF077SLS, ENCFF943PEE 569193053 ENCODE Processing Pipeline 1864cbb4baa14656f1752ef9af7ef3be https://www.encodeproject.org/files/ENCFF716RLN/@@download/ENCFF716RLN.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF973JHV bigWig fold change over control ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 ENCFF092EIK, ENCFF167KVB 481492284 ENCODE Processing Pipeline 895659310be32c1fba2830f4c5088a33 https://www.encodeproject.org/files/ENCFF973JHV/@@download/ENCFF973JHV.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF215XMA bigWig fold change over control ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF012XJU, ENCFF077SLS, ENCFF943PEE 702648994 ENCODE Processing Pipeline 385bd71b4500817425a6ea7d54065311 https://www.encodeproject.org/files/ENCFF215XMA/@@download/ENCFF215XMA.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF754ASE bigBed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 ENCFF180SMM 13079144 ENCODE Processing Pipeline 5ee334c0f74cf4c31be48ee5724f2a8e https://www.encodeproject.org/files/ENCFF754ASE/@@download/ENCFF754ASE.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF926MTA bed narrowPeak conservative idr thresholded peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF180SMM, ENCFF305SID, ENCFF419RSJ, ENCFF724DWZ 435764 ENCODE Processing Pipeline b54ea09bd9193576336854734b1b642a https://www.encodeproject.org/files/ENCFF926MTA/@@download/ENCFF926MTA.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF790IOM bigBed narrowPeak conservative idr thresholded peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF926MTA 921326 ENCODE Processing Pipeline ba3bb080f108cfb0e0380e8e9c4c4b62 https://www.encodeproject.org/files/ENCFF790IOM/@@download/ENCFF790IOM.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF209LZU bigBed narrowPeak optimal idr thresholded peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF613KAB 954410 ENCODE Processing Pipeline 2380552789b2f432ddb7a53a635d7758 https://www.encodeproject.org/files/ENCFF209LZU/@@download/ENCFF209LZU.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF858PBB bigWig signal p-value ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF092EIK, ENCFF167KVB, ENCFF895OOM 568855319 ENCODE Processing Pipeline 3a0274859595779b325969990a5e097e https://www.encodeproject.org/files/ENCFF858PBB/@@download/ENCFF858PBB.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF338ZRS bigWig fold change over control ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1 ENCFF012XJU, ENCFF943PEE 481712003 ENCODE Processing Pipeline 4f46fc52fa2dac5421cadb458d14c67d https://www.encodeproject.org/files/ENCFF338ZRS/@@download/ENCFF338ZRS.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF613KAB bed narrowPeak optimal idr thresholded peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 1, 2 ENCFF180SMM, ENCFF305SID, ENCFF419RSJ, ENCFF724DWZ 456421 ENCODE Processing Pipeline 520639ff104533331bd03278ccb235bd https://www.encodeproject.org/files/ENCFF613KAB/@@download/ENCFF613KAB.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF981TNW bed narrowPeak peaks ENCSR269TNX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPA-human ENCAB697XQW DNA False 2016-10-31 ENCODE 2 ENCFF077SLS, ENCFF943PEE 5403664 ENCODE Processing Pipeline 6d4779a856d29b4fdebf5465a2a6bd46 https://www.encodeproject.org/files/ENCFF981TNW/@@download/ENCFF981TNW.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF371NAN fastq reads ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1806136009 Richard Myers, HAIB 8bcdd1ae6c6a88cf8183f16c6e64e440 SRA:SRR5338925 https://www.encodeproject.org/files/ENCFF371NAN/@@download/ENCFF371NAN.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF345EHR fastq reads ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2062722923 Richard Myers, HAIB 80827ff7037a2d4c822f7fb8d3965e28 SRA:SRR5338926 https://www.encodeproject.org/files/ENCFF345EHR/@@download/ENCFF345EHR.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF465UWH bam unfiltered alignments ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF345EHR, ENCFF643CGH 2234868680 ENCODE Processing Pipeline c1d7be2a9a87a6cd0bd7da1796a737ca https://www.encodeproject.org/files/ENCFF465UWH/@@download/ENCFF465UWH.bam GRCh38 released antibody characterized with exemption ENCFF142XSK bam unfiltered alignments ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF345EHR, ENCFF807MUK 2236779407 ENCODE Processing Pipeline 05060fd78982ec5460c77a879c2b1390 https://www.encodeproject.org/files/ENCFF142XSK/@@download/ENCFF142XSK.bam hg19 released antibody characterized with exemption ENCFF026KAS bam unfiltered alignments ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF371NAN, ENCFF643CGH 1943869139 ENCODE Processing Pipeline 89d76152915aaacd82eef88560e8286b https://www.encodeproject.org/files/ENCFF026KAS/@@download/ENCFF026KAS.bam GRCh38 released antibody characterized with exemption ENCFF243MLA bam unfiltered alignments ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF371NAN, ENCFF807MUK 1944849722 ENCODE Processing Pipeline eaeaaf6b72f538df689d80f0c41004ab https://www.encodeproject.org/files/ENCFF243MLA/@@download/ENCFF243MLA.bam hg19 released antibody characterized with exemption ENCFF774TIB bam alignments ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF371NAN, ENCFF807MUK 1269894450 ENCODE Processing Pipeline 7a23ee176f78414cd117b84d1c135b82 https://www.encodeproject.org/files/ENCFF774TIB/@@download/ENCFF774TIB.bam hg19 released antibody characterized with exemption ENCFF523VQN bam alignments ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF371NAN, ENCFF643CGH 1270246654 ENCODE Processing Pipeline 06408f1dbf90cdf9d12c63377621124d https://www.encodeproject.org/files/ENCFF523VQN/@@download/ENCFF523VQN.bam GRCh38 released antibody characterized with exemption ENCFF404YMM bam alignments ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF345EHR, ENCFF643CGH 1464823134 ENCODE Processing Pipeline 927b077f4503207ea493e150497ed1bb https://www.encodeproject.org/files/ENCFF404YMM/@@download/ENCFF404YMM.bam GRCh38 released antibody characterized with exemption ENCFF463MDN bam alignments ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF345EHR, ENCFF807MUK 1464181818 ENCODE Processing Pipeline 1cc146778f6363c8d960c7abf6c7489a https://www.encodeproject.org/files/ENCFF463MDN/@@download/ENCFF463MDN.bam hg19 released antibody characterized with exemption ENCFF752UCV bigWig signal p-value ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF404YMM 494002287 ENCODE Processing Pipeline 499cc2d8c4053465ae1563ab3d30390c https://www.encodeproject.org/files/ENCFF752UCV/@@download/ENCFF752UCV.bigWig GRCh38 released antibody characterized with exemption ENCFF933IGL bigWig signal p-value ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF523VQN 639867407 ENCODE Processing Pipeline a2864aea0debd96f908c1abedf59d836 https://www.encodeproject.org/files/ENCFF933IGL/@@download/ENCFF933IGL.bigWig GRCh38 released antibody characterized with exemption ENCFF935NVE bigWig signal p-value ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF404YMM, ENCFF523VQN 658118338 ENCODE Processing Pipeline 78cc19a428031330ec0d24ab7aa23ffd https://www.encodeproject.org/files/ENCFF935NVE/@@download/ENCFF935NVE.bigWig GRCh38 released antibody characterized with exemption ENCFF154PWP bigWig fold change over control ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF523VQN 487536284 ENCODE Processing Pipeline 3b10e43af5d787f49aba63724ff89a76 https://www.encodeproject.org/files/ENCFF154PWP/@@download/ENCFF154PWP.bigWig GRCh38 released antibody characterized with exemption ENCFF042VJD bigWig fold change over control ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF404YMM 539951050 ENCODE Processing Pipeline 36e922d1eab72df4e219411228422ca2 https://www.encodeproject.org/files/ENCFF042VJD/@@download/ENCFF042VJD.bigWig GRCh38 released antibody characterized with exemption ENCFF206SFE bigWig fold change over control ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF404YMM, ENCFF523VQN 855648550 ENCODE Processing Pipeline cb24e3809665647233101e30720ddb8b https://www.encodeproject.org/files/ENCFF206SFE/@@download/ENCFF206SFE.bigWig GRCh38 released antibody characterized with exemption ENCFF116GNA bed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF523VQN 6499975 ENCODE Processing Pipeline be6349cafd07fece759ad0e700a1bb0c https://www.encodeproject.org/files/ENCFF116GNA/@@download/ENCFF116GNA.bed.gz GRCh38 released antibody characterized with exemption ENCFF059YKU bed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF404YMM 6468310 ENCODE Processing Pipeline 93d6d768cdc14152975b80e097410162 https://www.encodeproject.org/files/ENCFF059YKU/@@download/ENCFF059YKU.bed.gz GRCh38 released antibody characterized with exemption ENCFF058MPA bed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF404YMM, ENCFF523VQN 6913793 ENCODE Processing Pipeline 6ab806edc92358d4aa1de6fd85031783 https://www.encodeproject.org/files/ENCFF058MPA/@@download/ENCFF058MPA.bed.gz GRCh38 released antibody characterized with exemption ENCFF158UYU bigBed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF116GNA 12740585 ENCODE Processing Pipeline 26417ff3624e93f105b9738fe4d97bed https://www.encodeproject.org/files/ENCFF158UYU/@@download/ENCFF158UYU.bigBed GRCh38 released antibody characterized with exemption ENCFF910RIN bigBed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF059YKU 12941403 ENCODE Processing Pipeline 67e1dd357ff251335a9559867093b41a https://www.encodeproject.org/files/ENCFF910RIN/@@download/ENCFF910RIN.bigBed GRCh38 released antibody characterized with exemption ENCFF102KJV bigBed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF058MPA 12766676 ENCODE Processing Pipeline 3c67b54bfd870d6c2b0c730cc15a7e9f https://www.encodeproject.org/files/ENCFF102KJV/@@download/ENCFF102KJV.bigBed GRCh38 released antibody characterized with exemption ENCFF655VHR bigBed narrowPeak conservative idr thresholded peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF846OVB 1166391 ENCODE Processing Pipeline 835bf6d43ef242ae901f253ab1a86d3e https://www.encodeproject.org/files/ENCFF655VHR/@@download/ENCFF655VHR.bigBed GRCh38 released antibody characterized with exemption ENCFF846OVB bed narrowPeak conservative idr thresholded peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF058MPA, ENCFF059YKU, ENCFF116GNA, ENCFF419RSJ 629935 ENCODE Processing Pipeline 7a202780d6387059bd74d8952d68fa23 https://www.encodeproject.org/files/ENCFF846OVB/@@download/ENCFF846OVB.bed.gz GRCh38 released antibody characterized with exemption ENCFF587YUU bigBed narrowPeak optimal idr thresholded peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF054TEP 1174469 ENCODE Processing Pipeline 270c8210a5f5174bc78807e088867173 https://www.encodeproject.org/files/ENCFF587YUU/@@download/ENCFF587YUU.bigBed GRCh38 released antibody characterized with exemption ENCFF054TEP bed narrowPeak optimal idr thresholded peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF058MPA, ENCFF059YKU, ENCFF116GNA, ENCFF419RSJ 635606 ENCODE Processing Pipeline d0d0cdc9bd6d402585dcef6dad2d74c5 https://www.encodeproject.org/files/ENCFF054TEP/@@download/ENCFF054TEP.bed.gz GRCh38 released antibody characterized with exemption ENCFF588KOY bigWig signal p-value ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF774TIB 1326409800 ENCODE Processing Pipeline 205f02ff231f19a98e088fb2861832c4 https://www.encodeproject.org/files/ENCFF588KOY/@@download/ENCFF588KOY.bigWig hg19 released antibody characterized with exemption ENCFF692ZFX bigWig signal p-value ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF463MDN 1350287337 ENCODE Processing Pipeline 16d2fe01fbfd996cccf54373f772c10b https://www.encodeproject.org/files/ENCFF692ZFX/@@download/ENCFF692ZFX.bigWig hg19 released antibody characterized with exemption ENCFF204JJP bigWig fold change over control ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF463MDN 997780014 ENCODE Processing Pipeline 50d55120cab2580f33d573241078bf90 https://www.encodeproject.org/files/ENCFF204JJP/@@download/ENCFF204JJP.bigWig hg19 released antibody characterized with exemption ENCFF766EZW bigWig signal p-value ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF463MDN, ENCFF774TIB 1585819779 ENCODE Processing Pipeline e6489cd202dc5d2d54e320a83342ca70 https://www.encodeproject.org/files/ENCFF766EZW/@@download/ENCFF766EZW.bigWig hg19 released antibody characterized with exemption ENCFF139JFM bigWig fold change over control ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF774TIB 960642416 ENCODE Processing Pipeline 06565f4a757c47ff20bf668028c599bc https://www.encodeproject.org/files/ENCFF139JFM/@@download/ENCFF139JFM.bigWig hg19 released antibody characterized with exemption ENCFF363YQT bigWig fold change over control ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF463MDN, ENCFF774TIB 1445174405 ENCODE Processing Pipeline 227663b7ea6f91b82f0e3fed228ca4a5 https://www.encodeproject.org/files/ENCFF363YQT/@@download/ENCFF363YQT.bigWig hg19 released antibody characterized with exemption ENCFF942SPR bed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF774TIB 6817291 ENCODE Processing Pipeline 2907ce317efaa297bc43c8ca0eb9cb74 https://www.encodeproject.org/files/ENCFF942SPR/@@download/ENCFF942SPR.bed.gz hg19 released antibody characterized with exemption ENCFF916LOP bed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF463MDN, ENCFF774TIB 7164499 ENCODE Processing Pipeline 2f09d70f378e148e7af9414d38c54c59 https://www.encodeproject.org/files/ENCFF916LOP/@@download/ENCFF916LOP.bed.gz hg19 released antibody characterized with exemption ENCFF435TGK bed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF463MDN 6966635 ENCODE Processing Pipeline 0bf8d3fdd297d53839ce0fbe5316367a https://www.encodeproject.org/files/ENCFF435TGK/@@download/ENCFF435TGK.bed.gz hg19 released antibody characterized with exemption ENCFF094GPG bigBed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF942SPR 12628791 ENCODE Processing Pipeline c353e211ec8a7d55a92002a59ec06d8c https://www.encodeproject.org/files/ENCFF094GPG/@@download/ENCFF094GPG.bigBed hg19 released antibody characterized with exemption ENCFF171YYY bigBed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF435TGK 13009795 ENCODE Processing Pipeline f439607b15bbd3162e1afd58784b667f https://www.encodeproject.org/files/ENCFF171YYY/@@download/ENCFF171YYY.bigBed hg19 released antibody characterized with exemption ENCFF764VEP bigBed narrowPeak peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF916LOP 12840393 ENCODE Processing Pipeline 6300455a45301f6125535c24127be2b7 https://www.encodeproject.org/files/ENCFF764VEP/@@download/ENCFF764VEP.bigBed hg19 released antibody characterized with exemption ENCFF106DGJ bed narrowPeak optimal idr thresholded peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF435TGK, ENCFF916LOP, ENCFF942SPR 662044 ENCODE Processing Pipeline 97d6977994544427b738f60719368b09 https://www.encodeproject.org/files/ENCFF106DGJ/@@download/ENCFF106DGJ.bed.gz hg19 released antibody characterized with exemption ENCFF794QNM bigBed narrowPeak optimal idr thresholded peaks ENCSR562POI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THAP11-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF106DGJ 1229368 ENCODE Processing Pipeline ca9d5ad37bcd4b053abbfb98885339e9 https://www.encodeproject.org/files/ENCFF794QNM/@@download/ENCFF794QNM.bigBed hg19 released antibody characterized with exemption ENCFF095AEN fastq reads ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1387382347 Richard Myers, HAIB 5aaaecd48d9509a3c7741d5428b85849 SRA:SRR5339380 https://www.encodeproject.org/files/ENCFF095AEN/@@download/ENCFF095AEN.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF862ZWK fastq reads ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1543752932 Richard Myers, HAIB 519b0cc90cfbbab5ecda3cb11e09296f SRA:SRR5339379 https://www.encodeproject.org/files/ENCFF862ZWK/@@download/ENCFF862ZWK.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF928UGX bam unfiltered alignments ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF095AEN, ENCFF807MUK 1483936293 ENCODE Processing Pipeline 534ba4931b54236d65d2690bc84952d7 https://www.encodeproject.org/files/ENCFF928UGX/@@download/ENCFF928UGX.bam hg19 released antibody characterized with exemption ENCFF612OKW bam unfiltered alignments ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF862ZWK 1606132165 ENCODE Processing Pipeline 0627032e6055c85bff893ac0e25d6922 https://www.encodeproject.org/files/ENCFF612OKW/@@download/ENCFF612OKW.bam GRCh38 released antibody characterized with exemption ENCFF158MII bam unfiltered alignments ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF095AEN, ENCFF643CGH 1487716435 ENCODE Processing Pipeline 57ce3ba0f4b6d94bded78b6d1f8472bb https://www.encodeproject.org/files/ENCFF158MII/@@download/ENCFF158MII.bam GRCh38 released antibody characterized with exemption ENCFF466FOB bam unfiltered alignments ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF862ZWK 1603376365 ENCODE Processing Pipeline 568cc63b0280418a176c752d93932672 https://www.encodeproject.org/files/ENCFF466FOB/@@download/ENCFF466FOB.bam hg19 released antibody characterized with exemption ENCFF784OML bam alignments ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF095AEN, ENCFF807MUK 1118214477 ENCODE Processing Pipeline 28a974dc75923fe2d6f735855fc29629 https://www.encodeproject.org/files/ENCFF784OML/@@download/ENCFF784OML.bam hg19 released antibody characterized with exemption ENCFF471KSC bam alignments ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF862ZWK 1171157212 ENCODE Processing Pipeline 02ac50a6db4f09377d083ea4525cb878 https://www.encodeproject.org/files/ENCFF471KSC/@@download/ENCFF471KSC.bam GRCh38 released antibody characterized with exemption ENCFF399MTG bam alignments ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF095AEN, ENCFF643CGH 1118877915 ENCODE Processing Pipeline b3db353645aa01a1742702e618d0f739 https://www.encodeproject.org/files/ENCFF399MTG/@@download/ENCFF399MTG.bam GRCh38 released antibody characterized with exemption ENCFF254QWH bam alignments ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF862ZWK 1170786581 ENCODE Processing Pipeline be8289e14ae33f441bfc91fbd27fb8a5 https://www.encodeproject.org/files/ENCFF254QWH/@@download/ENCFF254QWH.bam hg19 released antibody characterized with exemption ENCFF398EKQ bigWig signal p-value ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF471KSC 467827939 ENCODE Processing Pipeline a66edb600d0bafabfd05614dd0d398b5 https://www.encodeproject.org/files/ENCFF398EKQ/@@download/ENCFF398EKQ.bigWig GRCh38 released antibody characterized with exemption ENCFF271JKO bigWig signal p-value ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF399MTG 520698521 ENCODE Processing Pipeline 7a20e6b64808d194b17c1b11fe20636b https://www.encodeproject.org/files/ENCFF271JKO/@@download/ENCFF271JKO.bigWig GRCh38 released antibody characterized with exemption ENCFF126RBQ bigWig signal p-value ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF399MTG, ENCFF471KSC 673352650 ENCODE Processing Pipeline 431af4b16fa94c36175b43425650c4e5 https://www.encodeproject.org/files/ENCFF126RBQ/@@download/ENCFF126RBQ.bigWig GRCh38 released antibody characterized with exemption ENCFF911AWW bigWig fold change over control ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF471KSC 465745064 ENCODE Processing Pipeline 4f83949c25babb5995f7251026ef711f https://www.encodeproject.org/files/ENCFF911AWW/@@download/ENCFF911AWW.bigWig GRCh38 released antibody characterized with exemption ENCFF238NVL bigWig fold change over control ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF399MTG 459880569 ENCODE Processing Pipeline c7c08db302d9d224c9d7eff85e03ded5 https://www.encodeproject.org/files/ENCFF238NVL/@@download/ENCFF238NVL.bigWig GRCh38 released antibody characterized with exemption ENCFF851CDJ bigWig fold change over control ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF399MTG, ENCFF471KSC 769281946 ENCODE Processing Pipeline 9a1dc88a83d71b16db091ed32b552040 https://www.encodeproject.org/files/ENCFF851CDJ/@@download/ENCFF851CDJ.bigWig GRCh38 released antibody characterized with exemption ENCFF280NGD bed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF471KSC 5731533 ENCODE Processing Pipeline 28616afca926c82dfc97cc52385cafb7 https://www.encodeproject.org/files/ENCFF280NGD/@@download/ENCFF280NGD.bed.gz GRCh38 released antibody characterized with exemption ENCFF045RQG bed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF399MTG 5377307 ENCODE Processing Pipeline 70722df144fe86e2dbdc12413c08dd32 https://www.encodeproject.org/files/ENCFF045RQG/@@download/ENCFF045RQG.bed.gz GRCh38 released antibody characterized with exemption ENCFF949ZYZ bed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF399MTG, ENCFF471KSC 6257460 ENCODE Processing Pipeline 4d2b0c2cc899b671abc6dd4ca5c2509b https://www.encodeproject.org/files/ENCFF949ZYZ/@@download/ENCFF949ZYZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF942OEJ bigBed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF280NGD 12993266 ENCODE Processing Pipeline 0cd2840d4ebf8f5f284116796fa8d2aa https://www.encodeproject.org/files/ENCFF942OEJ/@@download/ENCFF942OEJ.bigBed GRCh38 released antibody characterized with exemption ENCFF902FGV bigBed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF045RQG 13151062 ENCODE Processing Pipeline 109d61f6b0a8b4dc39524d3f97749a83 https://www.encodeproject.org/files/ENCFF902FGV/@@download/ENCFF902FGV.bigBed GRCh38 released antibody characterized with exemption ENCFF574ZLJ bigBed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF949ZYZ 13170291 ENCODE Processing Pipeline 43b263ac462e69202a847933df59cd14 https://www.encodeproject.org/files/ENCFF574ZLJ/@@download/ENCFF574ZLJ.bigBed GRCh38 released antibody characterized with exemption ENCFF863TTH bed narrowPeak conservative idr thresholded peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF045RQG, ENCFF280NGD, ENCFF419RSJ, ENCFF949ZYZ 567940 ENCODE Processing Pipeline 6f9bab0e691df46a8f5d3bfeaedf6870 https://www.encodeproject.org/files/ENCFF863TTH/@@download/ENCFF863TTH.bed.gz GRCh38 released antibody characterized with exemption ENCFF786BSA bed narrowPeak optimal idr thresholded peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF045RQG, ENCFF280NGD, ENCFF419RSJ, ENCFF949ZYZ 644584 ENCODE Processing Pipeline c17a093b670dbea4317afef2fac097c0 https://www.encodeproject.org/files/ENCFF786BSA/@@download/ENCFF786BSA.bed.gz GRCh38 released antibody characterized with exemption ENCFF937TCE bigBed narrowPeak conservative idr thresholded peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF863TTH 1125788 ENCODE Processing Pipeline aeaf016ec9dc5c79d4af7fd361a1df72 https://www.encodeproject.org/files/ENCFF937TCE/@@download/ENCFF937TCE.bigBed GRCh38 released antibody characterized with exemption ENCFF056BFN bigBed narrowPeak optimal idr thresholded peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF786BSA 1240030 ENCODE Processing Pipeline 0e1f168ef3237fd252bb9c93dfdc6411 https://www.encodeproject.org/files/ENCFF056BFN/@@download/ENCFF056BFN.bigBed GRCh38 released antibody characterized with exemption ENCFF210HRJ bigWig signal p-value ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF254QWH 1182831041 ENCODE Processing Pipeline b2adf85fdae664bbb6b3df9303b88ad1 https://www.encodeproject.org/files/ENCFF210HRJ/@@download/ENCFF210HRJ.bigWig hg19 released antibody characterized with exemption ENCFF277OIU bigWig signal p-value ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF784OML 1168515244 ENCODE Processing Pipeline d1ccd0151ea4cce04a186a28987435c9 https://www.encodeproject.org/files/ENCFF277OIU/@@download/ENCFF277OIU.bigWig hg19 released antibody characterized with exemption ENCFF025LQB bigWig signal p-value ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF254QWH, ENCFF784OML 1404449307 ENCODE Processing Pipeline 7584bf090a139e44a70816c8b10bd9ac https://www.encodeproject.org/files/ENCFF025LQB/@@download/ENCFF025LQB.bigWig hg19 released antibody characterized with exemption ENCFF164WSI bigWig fold change over control ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF254QWH 884736892 ENCODE Processing Pipeline 9bd0c8186cf1e1cc4056fd0b3af5db35 https://www.encodeproject.org/files/ENCFF164WSI/@@download/ENCFF164WSI.bigWig hg19 released antibody characterized with exemption ENCFF084FPA bigWig fold change over control ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF784OML 874812920 ENCODE Processing Pipeline abe4122af556b57d44f25f2301a3ad33 https://www.encodeproject.org/files/ENCFF084FPA/@@download/ENCFF084FPA.bigWig hg19 released antibody characterized with exemption ENCFF517TGS bigWig fold change over control ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF254QWH, ENCFF784OML 1347394226 ENCODE Processing Pipeline b5fbda3bfd635dfd3395a777bfc47595 https://www.encodeproject.org/files/ENCFF517TGS/@@download/ENCFF517TGS.bigWig hg19 released antibody characterized with exemption ENCFF614LFE bed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF254QWH 6405359 ENCODE Processing Pipeline 83c4efe2348a579e7265eaca24f6529c https://www.encodeproject.org/files/ENCFF614LFE/@@download/ENCFF614LFE.bed.gz hg19 released antibody characterized with exemption ENCFF651MYL bed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF784OML 6070841 ENCODE Processing Pipeline bce36ae0ca5ba42452121e0c5418c447 https://www.encodeproject.org/files/ENCFF651MYL/@@download/ENCFF651MYL.bed.gz hg19 released antibody characterized with exemption ENCFF378WYA bed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF254QWH, ENCFF784OML 6785220 ENCODE Processing Pipeline 9078bbae3368fd6cbb254ff3d233f9d1 https://www.encodeproject.org/files/ENCFF378WYA/@@download/ENCFF378WYA.bed.gz hg19 released antibody characterized with exemption ENCFF492KJA bigBed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF614LFE 13144542 ENCODE Processing Pipeline 48655ea25949935ec7e736f709a9e76c https://www.encodeproject.org/files/ENCFF492KJA/@@download/ENCFF492KJA.bigBed hg19 released antibody characterized with exemption ENCFF811LFP bigBed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF378WYA 13287466 ENCODE Processing Pipeline 66347a0ab371c67bb221e8d344e2d7d5 https://www.encodeproject.org/files/ENCFF811LFP/@@download/ENCFF811LFP.bigBed hg19 released antibody characterized with exemption ENCFF637PDB bigBed narrowPeak peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF651MYL 13355048 ENCODE Processing Pipeline 5c4034e92bd94425ba9cf81430871c9f https://www.encodeproject.org/files/ENCFF637PDB/@@download/ENCFF637PDB.bigBed hg19 released antibody characterized with exemption ENCFF518ZXD bed narrowPeak optimal idr thresholded peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF378WYA, ENCFF614LFE, ENCFF651MYL 642388 ENCODE Processing Pipeline 0126686f382b16e6194d34e2f03fe860 https://www.encodeproject.org/files/ENCFF518ZXD/@@download/ENCFF518ZXD.bed.gz hg19 released antibody characterized with exemption ENCFF203RWA bed narrowPeak conservative idr thresholded peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF378WYA, ENCFF614LFE, ENCFF651MYL 566370 ENCODE Processing Pipeline f5d0ce24207332357bf5b3bc8d6131f2 https://www.encodeproject.org/files/ENCFF203RWA/@@download/ENCFF203RWA.bed.gz hg19 released antibody characterized with exemption ENCFF348GTX bigBed narrowPeak conservative idr thresholded peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203RWA 1166320 ENCODE Processing Pipeline fce014d0856710f1a995b0b9b76c37f6 https://www.encodeproject.org/files/ENCFF348GTX/@@download/ENCFF348GTX.bigBed hg19 released antibody characterized with exemption ENCFF970KQA bigBed narrowPeak optimal idr thresholded peaks ENCSR798IJO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-NR2F6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF518ZXD 1277254 ENCODE Processing Pipeline 3e3b9aac187ed1f1a12a0a42bdf87aa7 https://www.encodeproject.org/files/ENCFF970KQA/@@download/ENCFF970KQA.bigBed hg19 released antibody characterized with exemption ENCFF395VGH fastq reads ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 975913234 Richard Myers, HAIB c571b0c1e60ce7628155c8f39757a653 SRA:SRR5339403 https://www.encodeproject.org/files/ENCFF395VGH/@@download/ENCFF395VGH.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF967ZPY fastq reads ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 999426684 Richard Myers, HAIB d1bb759ebecb3ba19d50b7b424fee270 SRA:SRR5339404 https://www.encodeproject.org/files/ENCFF967ZPY/@@download/ENCFF967ZPY.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF393RUJ bam alignments ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF395VGH, ENCFF807MUK 864622523 ENCODE Processing Pipeline 92bf620f4587a56ef9bd2e00dae9973d https://www.encodeproject.org/files/ENCFF393RUJ/@@download/ENCFF393RUJ.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF085FPP bam alignments ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF807MUK, ENCFF967ZPY 880022900 ENCODE Processing Pipeline b5908fcff7fa702d28cb963132e16d17 https://www.encodeproject.org/files/ENCFF085FPP/@@download/ENCFF085FPP.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF526SLI bigWig fold change over control ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF393RUJ 389126418 ENCODE Processing Pipeline 2721bd9c8e7751ab6e60b46172817af4 https://www.encodeproject.org/files/ENCFF526SLI/@@download/ENCFF526SLI.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF268REH bigWig signal p-value ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF085FPP, ENCFF393RUJ 448640928 ENCODE Processing Pipeline 582c39959181b2ae601f8b25a2ca5901 https://www.encodeproject.org/files/ENCFF268REH/@@download/ENCFF268REH.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF235ZRP bigWig signal p-value ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF085FPP 440347792 ENCODE Processing Pipeline edf8b9fcc650666dd0de40b39ba9511e https://www.encodeproject.org/files/ENCFF235ZRP/@@download/ENCFF235ZRP.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF972ISD bigWig signal p-value ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF393RUJ 405455369 ENCODE Processing Pipeline d2284cdb532dcb6469e63c63a8466420 https://www.encodeproject.org/files/ENCFF972ISD/@@download/ENCFF972ISD.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF620DEV bigBed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF230HGO 10981213 ENCODE Processing Pipeline cc7c58ca1dfc198ad4d567e591c78d77 https://www.encodeproject.org/files/ENCFF620DEV/@@download/ENCFF620DEV.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF803XGI bigBed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF834BOR 13247441 ENCODE Processing Pipeline 2d12595c50b4efd5038bc3671bda16f3 https://www.encodeproject.org/files/ENCFF803XGI/@@download/ENCFF803XGI.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF834BOR bed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF393RUJ 5406547 ENCODE Processing Pipeline 295d2864b809ecf79aa410e9a0825b44 https://www.encodeproject.org/files/ENCFF834BOR/@@download/ENCFF834BOR.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF196WAX bigWig fold change over control ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF085FPP 398568236 ENCODE Processing Pipeline 3462dc8ec86f0b72c3429ca53100b433 https://www.encodeproject.org/files/ENCFF196WAX/@@download/ENCFF196WAX.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF364KNO bed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF085FPP, ENCFF393RUJ 6190963 ENCODE Processing Pipeline cead607a97332b0825b7f114932060ff https://www.encodeproject.org/files/ENCFF364KNO/@@download/ENCFF364KNO.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF363DJS bigWig fold change over control ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF085FPP, ENCFF393RUJ 672424316 ENCODE Processing Pipeline 1df2512f90204e15e8989b3aa2db369b https://www.encodeproject.org/files/ENCFF363DJS/@@download/ENCFF363DJS.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF230HGO bed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF085FPP 5142371 ENCODE Processing Pipeline 71ba62913bf26163ca612c6859c38da0 https://www.encodeproject.org/files/ENCFF230HGO/@@download/ENCFF230HGO.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF790ZAE bigBed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF364KNO 13382775 ENCODE Processing Pipeline 2d7f002dc5896cb5a996f3f081fbfc42 https://www.encodeproject.org/files/ENCFF790ZAE/@@download/ENCFF790ZAE.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF866XQJ bam unfiltered alignments ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF967ZPY 1148317691 ENCODE Processing Pipeline 5cfe47d7b547097142ccc0461936470d https://www.encodeproject.org/files/ENCFF866XQJ/@@download/ENCFF866XQJ.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF763CXZ bam unfiltered alignments ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF395VGH, ENCFF643CGH 1118237476 ENCODE Processing Pipeline 6c7965c7dbeb58c9916ef995dab5a8a9 https://www.encodeproject.org/files/ENCFF763CXZ/@@download/ENCFF763CXZ.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF430JGU bam alignments ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF395VGH, ENCFF643CGH 864613783 ENCODE Processing Pipeline 4e4ec66ef696ce0c15c1bcc676ede440 https://www.encodeproject.org/files/ENCFF430JGU/@@download/ENCFF430JGU.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF347VYQ bam alignments ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF967ZPY 879995232 ENCODE Processing Pipeline 0b4b519bf12c3ae8a7d9ab90b5900a12 https://www.encodeproject.org/files/ENCFF347VYQ/@@download/ENCFF347VYQ.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF507ZCH bigWig signal p-value ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF347VYQ, ENCFF582CVJ 440332623 ENCODE Processing Pipeline 638e6c6a03a8c0d11258aac8228e2cc2 https://www.encodeproject.org/files/ENCFF507ZCH/@@download/ENCFF507ZCH.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF519WBV bigWig signal p-value ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF430JGU, ENCFF582CVJ 523343776 ENCODE Processing Pipeline 1b5cc458c12246bf59705f13fabd7fb0 https://www.encodeproject.org/files/ENCFF519WBV/@@download/ENCFF519WBV.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF961QEI bigWig signal p-value ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF347VYQ, ENCFF430JGU, ENCFF582CVJ 451623943 ENCODE Processing Pipeline 517e1c3be7281106a19af465b4ab8aca https://www.encodeproject.org/files/ENCFF961QEI/@@download/ENCFF961QEI.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF053JPE bigWig fold change over control ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF347VYQ, ENCFF582CVJ 399088263 ENCODE Processing Pipeline 7e336f4740453d07495c27ec5ccc97af https://www.encodeproject.org/files/ENCFF053JPE/@@download/ENCFF053JPE.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF698GHR bigWig fold change over control ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF430JGU, ENCFF582CVJ 398879223 ENCODE Processing Pipeline 35e470e502bd3201d327e50afae24c42 https://www.encodeproject.org/files/ENCFF698GHR/@@download/ENCFF698GHR.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF969COV bed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF430JGU, ENCFF582CVJ 5207293 ENCODE Processing Pipeline d200740a4838e72fc10411397809ca31 https://www.encodeproject.org/files/ENCFF969COV/@@download/ENCFF969COV.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF393EHU bigWig fold change over control ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF347VYQ, ENCFF430JGU, ENCFF582CVJ 677124061 ENCODE Processing Pipeline fae09ac76a85f258c9466e6e28b12f2c https://www.encodeproject.org/files/ENCFF393EHU/@@download/ENCFF393EHU.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF536VXH bigBed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF802CVR 10909676 ENCODE Processing Pipeline 7f805681c37bfcb2fe6731b7b09cb14f https://www.encodeproject.org/files/ENCFF536VXH/@@download/ENCFF536VXH.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF891YYT bigBed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF969COV 13165772 ENCODE Processing Pipeline 36ce8109ad5eb4df1541a525aca11b49 https://www.encodeproject.org/files/ENCFF891YYT/@@download/ENCFF891YYT.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF802CVR bed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF347VYQ, ENCFF582CVJ 5001112 ENCODE Processing Pipeline 76cbf35439463ae14508fad114f79acd https://www.encodeproject.org/files/ENCFF802CVR/@@download/ENCFF802CVR.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF252UBE bigBed narrowPeak optimal idr thresholded peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF709YWO 281925 ENCODE Processing Pipeline 2bb84837e23ab5798a9653ee1c0e57f5 https://www.encodeproject.org/files/ENCFF252UBE/@@download/ENCFF252UBE.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF461ZTU bed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF347VYQ, ENCFF430JGU, ENCFF582CVJ 5949426 ENCODE Processing Pipeline fd6bf29e8071f5be2124767ddaacbbce https://www.encodeproject.org/files/ENCFF461ZTU/@@download/ENCFF461ZTU.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF709YWO bed narrowPeak optimal idr thresholded peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF461ZTU, ENCFF802CVR, ENCFF969COV 115548 ENCODE Processing Pipeline 14d34688c62574886efa3b6d3b1e605c https://www.encodeproject.org/files/ENCFF709YWO/@@download/ENCFF709YWO.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF024TSH bigBed narrowPeak peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF461ZTU 13363870 ENCODE Processing Pipeline a195f9fffc6f0603cd43ecd42d6ab3aa https://www.encodeproject.org/files/ENCFF024TSH/@@download/ENCFF024TSH.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF357SNU bigBed narrowPeak conservative idr thresholded peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF038ZBJ 206241 ENCODE Processing Pipeline 4ac08990aa15f393ab4fab406031e084 https://www.encodeproject.org/files/ENCFF357SNU/@@download/ENCFF357SNU.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF667PAI bed narrowPeak optimal idr thresholded peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF230HGO, ENCFF364KNO, ENCFF834BOR 103649 ENCODE Processing Pipeline 20d1799d8450373b83edb9309eb79e80 https://www.encodeproject.org/files/ENCFF667PAI/@@download/ENCFF667PAI.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF038ZBJ bed narrowPeak conservative idr thresholded peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF230HGO, ENCFF364KNO, ENCFF834BOR 97138 ENCODE Processing Pipeline e35c55d8a1ba98825a79c5767fb4d473 https://www.encodeproject.org/files/ENCFF038ZBJ/@@download/ENCFF038ZBJ.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF144JLJ bigBed narrowPeak optimal idr thresholded peaks ENCSR849DFF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF667PAI 214235 ENCODE Processing Pipeline 2f10fbb2d4d8bdfe81517ee66388fff2 https://www.encodeproject.org/files/ENCFF144JLJ/@@download/ENCFF144JLJ.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF079AGT fastq reads ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2974691562 Richard Myers, HAIB 182ff6310784f27f2f900a54012c3b3f SRA:SRR5339096 https://www.encodeproject.org/files/ENCFF079AGT/@@download/ENCFF079AGT.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF753ADO fastq reads ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1831918467 Richard Myers, HAIB 75ca786931af2c2aecc9cb733a8372d6 SRA:SRR5339095 https://www.encodeproject.org/files/ENCFF753ADO/@@download/ENCFF753ADO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF374GYZ bam unfiltered alignments ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF753ADO, ENCFF807MUK 2225443771 ENCODE Processing Pipeline 292846e1417ffad71890b7f84e4e315c https://www.encodeproject.org/files/ENCFF374GYZ/@@download/ENCFF374GYZ.bam hg19 released antibody characterized with exemption ENCFF259SVJ bam unfiltered alignments ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF079AGT, ENCFF807MUK 3536275768 ENCODE Processing Pipeline cccf1d36b8f35322ec3f5bbcf468f41d https://www.encodeproject.org/files/ENCFF259SVJ/@@download/ENCFF259SVJ.bam hg19 released antibody characterized with exemption ENCFF859RGN bam unfiltered alignments ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF079AGT, ENCFF643CGH 3548359882 ENCODE Processing Pipeline 16551e4f53f47fa502498749ae59ddf3 https://www.encodeproject.org/files/ENCFF859RGN/@@download/ENCFF859RGN.bam GRCh38 released antibody characterized with exemption ENCFF987STE bam unfiltered alignments ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF753ADO 2233002717 ENCODE Processing Pipeline 9d5fc3c0b9eb0a4496b5d0ba7a45aca2 https://www.encodeproject.org/files/ENCFF987STE/@@download/ENCFF987STE.bam GRCh38 released antibody characterized with exemption ENCFF754VKI bam alignments ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF753ADO, ENCFF807MUK 1640726578 ENCODE Processing Pipeline 3a7de9dede9183457b1f76bbaaa15784 https://www.encodeproject.org/files/ENCFF754VKI/@@download/ENCFF754VKI.bam hg19 released antibody characterized with exemption ENCFF372XYO bam alignments ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF753ADO 1642464166 ENCODE Processing Pipeline 7e23e159a8fd443d6a7f12f97bf24aa0 https://www.encodeproject.org/files/ENCFF372XYO/@@download/ENCFF372XYO.bam GRCh38 released antibody characterized with exemption ENCFF453XVL bam alignments ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF079AGT, ENCFF643CGH 2717160667 ENCODE Processing Pipeline 9bf815839e7058557d22465cb84d4bde https://www.encodeproject.org/files/ENCFF453XVL/@@download/ENCFF453XVL.bam GRCh38 released antibody characterized with exemption ENCFF970BNS bam alignments ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF079AGT, ENCFF807MUK 2714457672 ENCODE Processing Pipeline d8e3aaa515af2b8a5144e7b2c6d55a00 https://www.encodeproject.org/files/ENCFF970BNS/@@download/ENCFF970BNS.bam hg19 released antibody characterized with exemption ENCFF743QXT bigWig signal p-value ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF372XYO, ENCFF453XVL 639584594 ENCODE Processing Pipeline 570c9ad75b538ebe3731d3ad50e8cebe https://www.encodeproject.org/files/ENCFF743QXT/@@download/ENCFF743QXT.bigWig GRCh38 released antibody characterized with exemption ENCFF864GAC bigWig signal p-value ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF453XVL 669520516 ENCODE Processing Pipeline be56c89516c0777ba37268255eba2b14 https://www.encodeproject.org/files/ENCFF864GAC/@@download/ENCFF864GAC.bigWig GRCh38 released antibody characterized with exemption ENCFF625NUH bigWig signal p-value ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF372XYO 666042346 ENCODE Processing Pipeline 0361be0616a26285608084607ea322be https://www.encodeproject.org/files/ENCFF625NUH/@@download/ENCFF625NUH.bigWig GRCh38 released antibody characterized with exemption ENCFF897CCJ bigWig fold change over control ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF453XVL 862667721 ENCODE Processing Pipeline da7a2b161ba0636cf1f88958528628d6 https://www.encodeproject.org/files/ENCFF897CCJ/@@download/ENCFF897CCJ.bigWig GRCh38 released antibody characterized with exemption ENCFF802XFR bigWig fold change over control ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF372XYO, ENCFF453XVL 1175810107 ENCODE Processing Pipeline ea36279ce82a6115341fee5b82bc50cf https://www.encodeproject.org/files/ENCFF802XFR/@@download/ENCFF802XFR.bigWig GRCh38 released antibody characterized with exemption ENCFF178FID bed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF453XVL 5784442 ENCODE Processing Pipeline 899726cf32a073be3256f2a2d62a1c49 https://www.encodeproject.org/files/ENCFF178FID/@@download/ENCFF178FID.bed.gz GRCh38 released antibody characterized with exemption ENCFF454LGN bigBed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF182XWQ 11236089 ENCODE Processing Pipeline c52daac1f4e66649b6a952fc99f8e33c https://www.encodeproject.org/files/ENCFF454LGN/@@download/ENCFF454LGN.bigBed GRCh38 released antibody characterized with exemption ENCFF042QZA bigBed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF521USI 11118655 ENCODE Processing Pipeline bcac23b495daa73f93d2a82319ef09e7 https://www.encodeproject.org/files/ENCFF042QZA/@@download/ENCFF042QZA.bigBed GRCh38 released antibody characterized with exemption ENCFF248DOY bigWig fold change over control ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF372XYO 534987060 ENCODE Processing Pipeline a3e4bc9aa78a1e64a60cad1ee9315a14 https://www.encodeproject.org/files/ENCFF248DOY/@@download/ENCFF248DOY.bigWig GRCh38 released antibody characterized with exemption ENCFF995ZSA bed narrowPeak optimal idr thresholded peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF178FID, ENCFF182XWQ, ENCFF419RSJ, ENCFF521USI 147515 ENCODE Processing Pipeline 7c2a70920be27fbeeba68c2cb5cd9a4d https://www.encodeproject.org/files/ENCFF995ZSA/@@download/ENCFF995ZSA.bed.gz GRCh38 released antibody characterized with exemption ENCFF182XWQ bed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF372XYO 5006424 ENCODE Processing Pipeline e7ecccd6eabb45d1b4d34980c206bce7 https://www.encodeproject.org/files/ENCFF182XWQ/@@download/ENCFF182XWQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF948VRJ bed narrowPeak conservative idr thresholded peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF178FID, ENCFF182XWQ, ENCFF419RSJ, ENCFF521USI 110873 ENCODE Processing Pipeline 70fb39dc648d32021c2731c7914e4eb2 https://www.encodeproject.org/files/ENCFF948VRJ/@@download/ENCFF948VRJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF521USI bed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF372XYO, ENCFF453XVL 6299525 ENCODE Processing Pipeline d9fd8a6c422b10ee88389fbdc2aafbba https://www.encodeproject.org/files/ENCFF521USI/@@download/ENCFF521USI.bed.gz GRCh38 released antibody characterized with exemption ENCFF419RND bigBed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF178FID 13468711 ENCODE Processing Pipeline 55156341e712680806f439e76e320c38 https://www.encodeproject.org/files/ENCFF419RND/@@download/ENCFF419RND.bigBed GRCh38 released antibody characterized with exemption ENCFF362XIC bigBed narrowPeak conservative idr thresholded peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF948VRJ 233466 ENCODE Processing Pipeline ca204970faaf0f036e0d34042e535947 https://www.encodeproject.org/files/ENCFF362XIC/@@download/ENCFF362XIC.bigBed GRCh38 released antibody characterized with exemption ENCFF516JMB bigBed narrowPeak optimal idr thresholded peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF995ZSA 281765 ENCODE Processing Pipeline 3fac5ff71a9f5a7506fb790c5ccb25b5 https://www.encodeproject.org/files/ENCFF516JMB/@@download/ENCFF516JMB.bigBed GRCh38 released antibody characterized with exemption ENCFF043UOT bigWig signal p-value ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF970BNS 1280336918 ENCODE Processing Pipeline 5b848a7b0065ba974f321e12928dcf2f https://www.encodeproject.org/files/ENCFF043UOT/@@download/ENCFF043UOT.bigWig hg19 released antibody characterized with exemption ENCFF941GVE bigWig signal p-value ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF754VKI 1289861198 ENCODE Processing Pipeline de82d78a734dfbae98cf9d4a47da4842 https://www.encodeproject.org/files/ENCFF941GVE/@@download/ENCFF941GVE.bigWig hg19 released antibody characterized with exemption ENCFF914XTE bigWig signal p-value ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF754VKI, ENCFF970BNS 1705834355 ENCODE Processing Pipeline d47f923eef3ee7e0777e84318cb0c1b2 https://www.encodeproject.org/files/ENCFF914XTE/@@download/ENCFF914XTE.bigWig hg19 released antibody characterized with exemption ENCFF337ZHH bigWig fold change over control ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF970BNS 1417858799 ENCODE Processing Pipeline 1dfa7d899a468e96455ce63722693ce5 https://www.encodeproject.org/files/ENCFF337ZHH/@@download/ENCFF337ZHH.bigWig hg19 released antibody characterized with exemption ENCFF707SKM bigWig fold change over control ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF754VKI 996914848 ENCODE Processing Pipeline 96f76207368d18608ea1b5a0c54c0efe https://www.encodeproject.org/files/ENCFF707SKM/@@download/ENCFF707SKM.bigWig hg19 released antibody characterized with exemption ENCFF486XEI bigWig fold change over control ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF754VKI, ENCFF970BNS 1840062736 ENCODE Processing Pipeline 776e193a84c090d1110e4350fce3ec70 https://www.encodeproject.org/files/ENCFF486XEI/@@download/ENCFF486XEI.bigWig hg19 released antibody characterized with exemption ENCFF982JLX bed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF970BNS 6582722 ENCODE Processing Pipeline dda7cf3d1254906d95592536b1dd4c76 https://www.encodeproject.org/files/ENCFF982JLX/@@download/ENCFF982JLX.bed.gz hg19 released antibody characterized with exemption ENCFF959BSS bed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF754VKI 5959172 ENCODE Processing Pipeline 5130dd852416e154d8619cc2e9ee3f9e https://www.encodeproject.org/files/ENCFF959BSS/@@download/ENCFF959BSS.bed.gz hg19 released antibody characterized with exemption ENCFF932MXK bed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF754VKI, ENCFF970BNS 6959929 ENCODE Processing Pipeline e44d24a0f6189d1029ed414ed411a35a https://www.encodeproject.org/files/ENCFF932MXK/@@download/ENCFF932MXK.bed.gz hg19 released antibody characterized with exemption ENCFF399IFW bigBed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF982JLX 13612093 ENCODE Processing Pipeline 914aa069d7688e6b734273e08c9efd2d https://www.encodeproject.org/files/ENCFF399IFW/@@download/ENCFF399IFW.bigBed hg19 released antibody characterized with exemption ENCFF124YPR bigBed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF959BSS 11344414 ENCODE Processing Pipeline baa273d432364f1ba4fe5d1b0df6ed40 https://www.encodeproject.org/files/ENCFF124YPR/@@download/ENCFF124YPR.bigBed hg19 released antibody characterized with exemption ENCFF606MDN bed narrowPeak conservative idr thresholded peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF932MXK, ENCFF959BSS, ENCFF982JLX 111724 ENCODE Processing Pipeline 9829b11aaed649d507c61ccd7a689c45 https://www.encodeproject.org/files/ENCFF606MDN/@@download/ENCFF606MDN.bed.gz hg19 released antibody characterized with exemption ENCFF492BFD bigBed narrowPeak peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF932MXK 11416123 ENCODE Processing Pipeline 5dc0b3be4218c500a64d6f0cb2779285 https://www.encodeproject.org/files/ENCFF492BFD/@@download/ENCFF492BFD.bigBed hg19 released antibody characterized with exemption ENCFF496SOQ bigBed narrowPeak optimal idr thresholded peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF172WZC 277820 ENCODE Processing Pipeline 8b227ba6d8cdd6c525d6cc8e1996ee4a https://www.encodeproject.org/files/ENCFF496SOQ/@@download/ENCFF496SOQ.bigBed hg19 released antibody characterized with exemption ENCFF353DOD bigBed narrowPeak conservative idr thresholded peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF606MDN 240466 ENCODE Processing Pipeline 4a1f535b7bb8a06a0dbcb89921ed1626 https://www.encodeproject.org/files/ENCFF353DOD/@@download/ENCFF353DOD.bigBed hg19 released antibody characterized with exemption ENCFF172WZC bed narrowPeak optimal idr thresholded peaks ENCSR553QMC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF7-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF932MXK, ENCFF959BSS, ENCFF982JLX 139478 ENCODE Processing Pipeline 1cfd9eb23e90a2cc62c49a6d12fb602c https://www.encodeproject.org/files/ENCFF172WZC/@@download/ENCFF172WZC.bed.gz hg19 released antibody characterized with exemption ENCFF928MCL fastq reads ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1393297540 Richard Myers, HAIB 4aee42d225bfaefb599dfc7e5b0d0fb2 SRA:SRR5331379 https://www.encodeproject.org/files/ENCFF928MCL/@@download/ENCFF928MCL.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF649ROJ fastq reads ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1692088325 Richard Myers, HAIB 99e01925768e490675cdb6ee0207bd19 SRA:SRR5331378 https://www.encodeproject.org/files/ENCFF649ROJ/@@download/ENCFF649ROJ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF721QQA bam unfiltered alignments ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF928MCL 1609591267 ENCODE Processing Pipeline 246ac45a4cd8b81b4c3063f3c1d6124c https://www.encodeproject.org/files/ENCFF721QQA/@@download/ENCFF721QQA.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF304OJT bam unfiltered alignments ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF649ROJ 1974046062 ENCODE Processing Pipeline 74dd7ee7d876f87cc1931284f052f8cc https://www.encodeproject.org/files/ENCFF304OJT/@@download/ENCFF304OJT.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF744DAV bam unfiltered alignments ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF928MCL 1607128311 ENCODE Processing Pipeline ef949e50c97ea61a9c275200616b81f2 https://www.encodeproject.org/files/ENCFF744DAV/@@download/ENCFF744DAV.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF327HGF bam alignments ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF928MCL 1253372090 ENCODE Processing Pipeline 3fe7b202743e3e1ca4753218762e6910 https://www.encodeproject.org/files/ENCFF327HGF/@@download/ENCFF327HGF.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF649DFV bam unfiltered alignments ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF649ROJ, ENCFF807MUK 1969766549 ENCODE Processing Pipeline 57868429baa76b93298717fd6b204678 https://www.encodeproject.org/files/ENCFF649DFV/@@download/ENCFF649DFV.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF578RKV bam alignments ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF649ROJ 1561009394 ENCODE Processing Pipeline 395cb10e5f888cf2fefd9cf36d01d901 https://www.encodeproject.org/files/ENCFF578RKV/@@download/ENCFF578RKV.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF697DRW bam alignments ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF928MCL 1252951867 ENCODE Processing Pipeline 50608a61416fc596aa32335488147720 https://www.encodeproject.org/files/ENCFF697DRW/@@download/ENCFF697DRW.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF454AYY bam alignments ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF649ROJ, ENCFF807MUK 1560031248 ENCODE Processing Pipeline a283f8c646208343c86f49e660439304 https://www.encodeproject.org/files/ENCFF454AYY/@@download/ENCFF454AYY.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF392CPT bigWig signal p-value ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF578RKV 651527659 ENCODE Processing Pipeline c2d9315ff7c449bc98b9718e6fe2a4b2 https://www.encodeproject.org/files/ENCFF392CPT/@@download/ENCFF392CPT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF232PPT bigWig signal p-value ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF327HGF, ENCFF578RKV 669827773 ENCODE Processing Pipeline ad73e589793457e53aa61754530aadd1 https://www.encodeproject.org/files/ENCFF232PPT/@@download/ENCFF232PPT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF766RSM bigWig signal p-value ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF327HGF 634921096 ENCODE Processing Pipeline c49d9486a5c19398347f33bc654beb2e https://www.encodeproject.org/files/ENCFF766RSM/@@download/ENCFF766RSM.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF282KDI bigWig fold change over control ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF327HGF 500556471 ENCODE Processing Pipeline 5b02e4faaf730400fd53683a21f6445d https://www.encodeproject.org/files/ENCFF282KDI/@@download/ENCFF282KDI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF243FAP bigWig fold change over control ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF578RKV 583625916 ENCODE Processing Pipeline 5259f670582afa3761fe4fa62ae9f2ae https://www.encodeproject.org/files/ENCFF243FAP/@@download/ENCFF243FAP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF939AAT bigWig fold change over control ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF327HGF, ENCFF578RKV 889415579 ENCODE Processing Pipeline 9f7f6d39e30a8249e6c68f6a1aafc65f https://www.encodeproject.org/files/ENCFF939AAT/@@download/ENCFF939AAT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF256TQH bed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF578RKV 6402716 ENCODE Processing Pipeline 8367caaa93b1259ad5062318debde6f8 https://www.encodeproject.org/files/ENCFF256TQH/@@download/ENCFF256TQH.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF021VBL bigBed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF256TQH 13043141 ENCODE Processing Pipeline 83c00e495d7b48f25e5e8eb0aff0baad https://www.encodeproject.org/files/ENCFF021VBL/@@download/ENCFF021VBL.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF521DTH bed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF327HGF, ENCFF578RKV 7009636 ENCODE Processing Pipeline f980a46889593d4e709ebc99f486e0a6 https://www.encodeproject.org/files/ENCFF521DTH/@@download/ENCFF521DTH.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF004JJW bed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF327HGF 6613336 ENCODE Processing Pipeline c040d409aa5645061480292e7d257c4b https://www.encodeproject.org/files/ENCFF004JJW/@@download/ENCFF004JJW.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF821AMU bigBed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF004JJW 12564961 ENCODE Processing Pipeline 07cfc0c5cf54c8ee08ca97369d5afcb3 https://www.encodeproject.org/files/ENCFF821AMU/@@download/ENCFF821AMU.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF333ROM bigBed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF521DTH 12735642 ENCODE Processing Pipeline ebd17646c70492e954c2df04e27f1ab9 https://www.encodeproject.org/files/ENCFF333ROM/@@download/ENCFF333ROM.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF927IXY bigBed narrowPeak conservative idr thresholded peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF906KLB 434199 ENCODE Processing Pipeline 186b44093e4d7f3c3f89115c14d39ec3 https://www.encodeproject.org/files/ENCFF927IXY/@@download/ENCFF927IXY.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF906KLB bed narrowPeak conservative idr thresholded peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF004JJW, ENCFF256TQH, ENCFF419RSJ, ENCFF521DTH 232491 ENCODE Processing Pipeline bdffb3ad8033fd552856c44852df85e3 https://www.encodeproject.org/files/ENCFF906KLB/@@download/ENCFF906KLB.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF053GKA bed narrowPeak optimal idr thresholded peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF004JJW, ENCFF256TQH, ENCFF419RSJ, ENCFF521DTH 288179 ENCODE Processing Pipeline a1b0b7beffa17637d6e83981e6100edf https://www.encodeproject.org/files/ENCFF053GKA/@@download/ENCFF053GKA.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF178LDO bigBed narrowPeak optimal idr thresholded peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF053GKA 619186 ENCODE Processing Pipeline 75dba3854ab78b17ac47433522e46dec https://www.encodeproject.org/files/ENCFF178LDO/@@download/ENCFF178LDO.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF654XJH bigWig signal p-value ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF454AYY 1284747133 ENCODE Processing Pipeline 0dff582cbe5a833da2c782f63cc08a34 https://www.encodeproject.org/files/ENCFF654XJH/@@download/ENCFF654XJH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF848OVG bigWig signal p-value ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF697DRW 1279927596 ENCODE Processing Pipeline ecfded0247a7a5968aee42365ada0759 https://www.encodeproject.org/files/ENCFF848OVG/@@download/ENCFF848OVG.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF059XUT bigWig signal p-value ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF454AYY, ENCFF697DRW 1617535912 ENCODE Processing Pipeline b98d7d4691845ce88bba110aea888e17 https://www.encodeproject.org/files/ENCFF059XUT/@@download/ENCFF059XUT.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF938XLK bigWig fold change over control ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF454AYY 995397029 ENCODE Processing Pipeline bb52a1eb751e920a8db2e7311120ae38 https://www.encodeproject.org/files/ENCFF938XLK/@@download/ENCFF938XLK.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF646IGY bigWig fold change over control ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF454AYY, ENCFF697DRW 1445343571 ENCODE Processing Pipeline 541fadd1c58f6e41df13c13ada546d76 https://www.encodeproject.org/files/ENCFF646IGY/@@download/ENCFF646IGY.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF331UVQ bigWig fold change over control ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF697DRW 903955248 ENCODE Processing Pipeline d81393653961825a4a512ecad759a4d3 https://www.encodeproject.org/files/ENCFF331UVQ/@@download/ENCFF331UVQ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF365ZGD bed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF454AYY 6859543 ENCODE Processing Pipeline f1632e4dc7f3997b93294987f5d079d5 https://www.encodeproject.org/files/ENCFF365ZGD/@@download/ENCFF365ZGD.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF561ICJ bed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF697DRW 6858502 ENCODE Processing Pipeline d3e949555df36dc36966d1ddb939371d https://www.encodeproject.org/files/ENCFF561ICJ/@@download/ENCFF561ICJ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF166NFR bed narrowPeak optimal idr thresholded peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF365ZGD, ENCFF561ICJ, ENCFF827NBF 272344 ENCODE Processing Pipeline 067e2e5d44a2f5ff4be900c6a27fe9d6 https://www.encodeproject.org/files/ENCFF166NFR/@@download/ENCFF166NFR.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF827NBF bed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF454AYY, ENCFF697DRW 7081561 ENCODE Processing Pipeline 7b01bf9e2fad2fadac1c260f9a238b71 https://www.encodeproject.org/files/ENCFF827NBF/@@download/ENCFF827NBF.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF340NLF bigBed narrowPeak optimal idr thresholded peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF166NFR 506299 ENCODE Processing Pipeline 4bfab3ec5fac10f559d16c425b4e03c1 https://www.encodeproject.org/files/ENCFF340NLF/@@download/ENCFF340NLF.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF564UGX bed narrowPeak conservative idr thresholded peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF365ZGD, ENCFF561ICJ, ENCFF827NBF 238774 ENCODE Processing Pipeline b3adc2b53cb4d281a9ba3b49dc82b47b https://www.encodeproject.org/files/ENCFF564UGX/@@download/ENCFF564UGX.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF205YHD bigBed narrowPeak conservative idr thresholded peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF564UGX 461113 ENCODE Processing Pipeline 84acad594d770ec9ac37aff7e39d9164 https://www.encodeproject.org/files/ENCFF205YHD/@@download/ENCFF205YHD.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF707CQY bigBed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF561ICJ 12395994 ENCODE Processing Pipeline 2247bbabade9de6de265429bb91ab1f4 https://www.encodeproject.org/files/ENCFF707CQY/@@download/ENCFF707CQY.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF415JPA bigBed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF827NBF 12631454 ENCODE Processing Pipeline 94c8270c327f73c0e9e92fdbdb6c63e6 https://www.encodeproject.org/files/ENCFF415JPA/@@download/ENCFF415JPA.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF164XBZ bigBed narrowPeak peaks ENCSR184SVO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZBTB26-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF365ZGD 12943294 ENCODE Processing Pipeline 31f5700c47939248413790646e4df57c https://www.encodeproject.org/files/ENCFF164XBZ/@@download/ENCFF164XBZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF731JAM fastq reads ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1409768115 Richard Myers, HAIB 63f5e56f3e08d209dc8e6e88bdc33f6f SRA:SRR5331643 https://www.encodeproject.org/files/ENCFF731JAM/@@download/ENCFF731JAM.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF249QKO fastq reads ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1225446607 Richard Myers, HAIB 923c5cb6b159d7a192a9ce68d3815ed6 SRA:SRR5331644 https://www.encodeproject.org/files/ENCFF249QKO/@@download/ENCFF249QKO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF330ZRD bam unfiltered alignments ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF249QKO, ENCFF643CGH 1485030842 ENCODE Processing Pipeline 2ae30c5078123a12166fb1ce0cfda498 https://www.encodeproject.org/files/ENCFF330ZRD/@@download/ENCFF330ZRD.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF512JVS bam unfiltered alignments ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF731JAM 1670073428 ENCODE Processing Pipeline 6a50735c9c546d769a4a496aaafad5a9 https://www.encodeproject.org/files/ENCFF512JVS/@@download/ENCFF512JVS.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF501INZ bam unfiltered alignments ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF249QKO, ENCFF807MUK 1480550022 ENCODE Processing Pipeline f440b570f19b72336b45da0b2d2240de https://www.encodeproject.org/files/ENCFF501INZ/@@download/ENCFF501INZ.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF477SJK bam unfiltered alignments ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF731JAM, ENCFF807MUK 1666888508 ENCODE Processing Pipeline 8ccf21f532a9f398721e92a870a59ce2 https://www.encodeproject.org/files/ENCFF477SJK/@@download/ENCFF477SJK.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF340NFD bam alignments ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF249QKO, ENCFF643CGH 1079290340 ENCODE Processing Pipeline bfa665c2361b78b0341c96b25d5834ba https://www.encodeproject.org/files/ENCFF340NFD/@@download/ENCFF340NFD.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF321FUE bam alignments ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF249QKO, ENCFF807MUK 1078215807 ENCODE Processing Pipeline 020bdd242e0fa7a0301b129bd4c1ecb2 https://www.encodeproject.org/files/ENCFF321FUE/@@download/ENCFF321FUE.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF884YQM bam alignments ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF731JAM 1259644167 ENCODE Processing Pipeline 249ee991ace1d8ddf6d8e2fc9db18d1b https://www.encodeproject.org/files/ENCFF884YQM/@@download/ENCFF884YQM.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF451EVJ bam alignments ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF731JAM, ENCFF807MUK 1259136429 ENCODE Processing Pipeline 12b6673e723e8209f9cbd4b37db166e3 https://www.encodeproject.org/files/ENCFF451EVJ/@@download/ENCFF451EVJ.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF630FGU bigWig signal p-value ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF884YQM 621846709 ENCODE Processing Pipeline e285f5f8b2f13ac17e6d2c7b9cf77b70 https://www.encodeproject.org/files/ENCFF630FGU/@@download/ENCFF630FGU.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF078LOT bigWig signal p-value ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF340NFD, ENCFF884YQM 678080757 ENCODE Processing Pipeline 1e88957c9276e2d3097e0552d5c58bca https://www.encodeproject.org/files/ENCFF078LOT/@@download/ENCFF078LOT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF255VIM bigWig fold change over control ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF884YQM 505648597 ENCODE Processing Pipeline f4aa4c8e22fad1357a460e81af474229 https://www.encodeproject.org/files/ENCFF255VIM/@@download/ENCFF255VIM.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF009IEM bigWig signal p-value ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF340NFD 494907476 ENCODE Processing Pipeline f2d3ac7ae91c13fe66cb19ee9a79e872 https://www.encodeproject.org/files/ENCFF009IEM/@@download/ENCFF009IEM.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF167HRN bigWig fold change over control ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF340NFD 430798836 ENCODE Processing Pipeline 5fbc436d6e5d2eb944c90cb588174069 https://www.encodeproject.org/files/ENCFF167HRN/@@download/ENCFF167HRN.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF567JHI bigWig fold change over control ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF340NFD, ENCFF884YQM 783019842 ENCODE Processing Pipeline b2fd5ea0eb95275289eb815a59ad6eaf https://www.encodeproject.org/files/ENCFF567JHI/@@download/ENCFF567JHI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF184BHB bed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF884YQM 5670547 ENCODE Processing Pipeline 38feec04f46f93a7aefe9302acaea538 https://www.encodeproject.org/files/ENCFF184BHB/@@download/ENCFF184BHB.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF469MPO bed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF340NFD, ENCFF884YQM 6175303 ENCODE Processing Pipeline 3ebdf17f43253c613d330d46ba332714 https://www.encodeproject.org/files/ENCFF469MPO/@@download/ENCFF469MPO.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF422DMI bigBed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF184BHB 13070523 ENCODE Processing Pipeline 0a0e2b4bd3b95cc72b466a0ae98b6953 https://www.encodeproject.org/files/ENCFF422DMI/@@download/ENCFF422DMI.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF943SCQ bed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF340NFD 4969250 ENCODE Processing Pipeline 02fb5c2b085e4cba3edcf81756f8bc0d https://www.encodeproject.org/files/ENCFF943SCQ/@@download/ENCFF943SCQ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF651MZD bigBed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF943SCQ 10974180 ENCODE Processing Pipeline 54b0e8ffdb1b6b1ad43f130cc9d6e18d https://www.encodeproject.org/files/ENCFF651MZD/@@download/ENCFF651MZD.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF179WWW bigBed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF469MPO 13288716 ENCODE Processing Pipeline f2cbd2d15ef25668fffc7e83382895cf https://www.encodeproject.org/files/ENCFF179WWW/@@download/ENCFF179WWW.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF132QXR bed narrowPeak conservative idr thresholded peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF184BHB, ENCFF419RSJ, ENCFF469MPO, ENCFF943SCQ 373024 ENCODE Processing Pipeline 9a810137e47013f2da2a281a28f1b3bf https://www.encodeproject.org/files/ENCFF132QXR/@@download/ENCFF132QXR.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF185BHD bed narrowPeak optimal idr thresholded peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF184BHB, ENCFF419RSJ, ENCFF469MPO, ENCFF943SCQ 418168 ENCODE Processing Pipeline 18c8b9b04db04bc3173350089d44d721 https://www.encodeproject.org/files/ENCFF185BHD/@@download/ENCFF185BHD.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF433GOE bigBed narrowPeak optimal idr thresholded peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF185BHD 858591 ENCODE Processing Pipeline de9beb5e9a0952662686e9afd4f1b116 https://www.encodeproject.org/files/ENCFF433GOE/@@download/ENCFF433GOE.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF041EXL bigBed narrowPeak conservative idr thresholded peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF132QXR 789405 ENCODE Processing Pipeline 3ea0b4db1dbaa9d268b55ee78649bc16 https://www.encodeproject.org/files/ENCFF041EXL/@@download/ENCFF041EXL.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF041GLB bigWig signal p-value ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF451EVJ 1155432087 ENCODE Processing Pipeline 76541886b923ed25bd28b327aa05c851 https://www.encodeproject.org/files/ENCFF041GLB/@@download/ENCFF041GLB.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF666IIX bigWig signal p-value ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF321FUE 1158645516 ENCODE Processing Pipeline 569dff49adbba3d0ce3035edadff0559 https://www.encodeproject.org/files/ENCFF666IIX/@@download/ENCFF666IIX.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF183CQJ bigWig signal p-value ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF321FUE, ENCFF451EVJ 1271417407 ENCODE Processing Pipeline 470bcb226093c5dbb13ba486ac610425 https://www.encodeproject.org/files/ENCFF183CQJ/@@download/ENCFF183CQJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF871BPJ bigWig fold change over control ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF451EVJ 984902005 ENCODE Processing Pipeline e2e5ba39c30be43c381dc6418abb4cad https://www.encodeproject.org/files/ENCFF871BPJ/@@download/ENCFF871BPJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF407SAH bigWig fold change over control ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF321FUE 787254848 ENCODE Processing Pipeline 947fc10a746da43c08572f6997a0f020 https://www.encodeproject.org/files/ENCFF407SAH/@@download/ENCFF407SAH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF114DWU bigWig fold change over control ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF321FUE, ENCFF451EVJ 1364054063 ENCODE Processing Pipeline bb8fa63008b198b6cae7aad8cabb7e5f https://www.encodeproject.org/files/ENCFF114DWU/@@download/ENCFF114DWU.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF676GNF bed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF321FUE 5813648 ENCODE Processing Pipeline ab35861a70e53bc286761572377cd7f7 https://www.encodeproject.org/files/ENCFF676GNF/@@download/ENCFF676GNF.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF136EWC bed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF321FUE, ENCFF451EVJ 6736732 ENCODE Processing Pipeline b79abc11020cc592300708a87c208a4b https://www.encodeproject.org/files/ENCFF136EWC/@@download/ENCFF136EWC.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF562QNG bigBed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF480ZUI 13216999 ENCODE Processing Pipeline 2570f4237ace62ab107e6372b0a87977 https://www.encodeproject.org/files/ENCFF562QNG/@@download/ENCFF562QNG.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF480ZUI bed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF451EVJ 6462431 ENCODE Processing Pipeline 26588437b4708bd22563a17f3b2860f9 https://www.encodeproject.org/files/ENCFF480ZUI/@@download/ENCFF480ZUI.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF747JNL bigBed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF676GNF 11280725 ENCODE Processing Pipeline 9ceea7843590620fe5066636d650f63b https://www.encodeproject.org/files/ENCFF747JNL/@@download/ENCFF747JNL.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF501PVO bed narrowPeak conservative idr thresholded peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF136EWC, ENCFF480ZUI, ENCFF676GNF 376786 ENCODE Processing Pipeline 5089f19d050816d990ea6a8afe22f244 https://www.encodeproject.org/files/ENCFF501PVO/@@download/ENCFF501PVO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF172QOE bigBed narrowPeak peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF136EWC 13361704 ENCODE Processing Pipeline 2c84837b2c087748bfef0f51a5101e27 https://www.encodeproject.org/files/ENCFF172QOE/@@download/ENCFF172QOE.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF534IGX bigBed narrowPeak conservative idr thresholded peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF501PVO 665951 ENCODE Processing Pipeline f689d6a33aca1d73875b9a22f97208cb https://www.encodeproject.org/files/ENCFF534IGX/@@download/ENCFF534IGX.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF478GBC bed narrowPeak optimal idr thresholded peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF136EWC, ENCFF480ZUI, ENCFF676GNF 416453 ENCODE Processing Pipeline e26e614b8f85a64d8257168f89ab9cbe https://www.encodeproject.org/files/ENCFF478GBC/@@download/ENCFF478GBC.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF673ZOU bigBed narrowPeak optimal idr thresholded peaks ENCSR019NPF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SP5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF478GBC 891855 ENCODE Processing Pipeline 460ca87a1d772ab0f3c45aeea9122f68 https://www.encodeproject.org/files/ENCFF673ZOU/@@download/ENCFF673ZOU.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF771RGQ fastq reads ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2021761567 Richard Myers, HAIB 4e566f12db57bd080d8dd44d9ddf4572 SRA:SRR5331281 https://www.encodeproject.org/files/ENCFF771RGQ/@@download/ENCFF771RGQ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF082XMQ fastq reads ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1672336259 Richard Myers, HAIB 18b66dd6133d1b8026c836163351e620 SRA:SRR5331282 https://www.encodeproject.org/files/ENCFF082XMQ/@@download/ENCFF082XMQ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF838RHI bam unfiltered alignments ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF771RGQ 2166491968 ENCODE Processing Pipeline d047a0df121a45d01b4c7ac6febc59b2 https://www.encodeproject.org/files/ENCFF838RHI/@@download/ENCFF838RHI.bam GRCh38 released antibody characterized with exemption ENCFF138ZVN bam unfiltered alignments ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF082XMQ, ENCFF643CGH 1804260852 ENCODE Processing Pipeline e108131e0c49d187879ab2e816b973f4 https://www.encodeproject.org/files/ENCFF138ZVN/@@download/ENCFF138ZVN.bam GRCh38 released antibody characterized with exemption ENCFF321LZY bam unfiltered alignments ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF082XMQ, ENCFF807MUK 1799864878 ENCODE Processing Pipeline bffb4a258573aba2df2534072f7acd89 https://www.encodeproject.org/files/ENCFF321LZY/@@download/ENCFF321LZY.bam hg19 released antibody characterized with exemption ENCFF356KHQ bam unfiltered alignments ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF771RGQ, ENCFF807MUK 2161175882 ENCODE Processing Pipeline 6b324abeff97763587bec87d48afe8c7 https://www.encodeproject.org/files/ENCFF356KHQ/@@download/ENCFF356KHQ.bam hg19 released antibody characterized with exemption ENCFF707MEF bam alignments ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF771RGQ 1660287107 ENCODE Processing Pipeline 5075fdc0160ba111f4c38a4bf826e184 https://www.encodeproject.org/files/ENCFF707MEF/@@download/ENCFF707MEF.bam GRCh38 released antibody characterized with exemption ENCFF405FFP bam alignments ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF082XMQ, ENCFF643CGH 1395001508 ENCODE Processing Pipeline e7503c5d5c6f3b86e534fc6d5ff59213 https://www.encodeproject.org/files/ENCFF405FFP/@@download/ENCFF405FFP.bam GRCh38 released antibody characterized with exemption ENCFF739MET bam alignments ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF082XMQ, ENCFF807MUK 1393941537 ENCODE Processing Pipeline bd8e7a5d4123fc0ac9bb08a744a592ca https://www.encodeproject.org/files/ENCFF739MET/@@download/ENCFF739MET.bam hg19 released antibody characterized with exemption ENCFF646JVE bam alignments ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF771RGQ, ENCFF807MUK 1659104091 ENCODE Processing Pipeline 42a5bde9c3a4866a69652fceef8aee04 https://www.encodeproject.org/files/ENCFF646JVE/@@download/ENCFF646JVE.bam hg19 released antibody characterized with exemption ENCFF217XSJ bigWig signal p-value ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF707MEF 675484034 ENCODE Processing Pipeline e0bf6ef6d5006a630eb87b904bcb06c7 https://www.encodeproject.org/files/ENCFF217XSJ/@@download/ENCFF217XSJ.bigWig GRCh38 released antibody characterized with exemption ENCFF336VPJ bigWig signal p-value ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF405FFP, ENCFF707MEF 652374872 ENCODE Processing Pipeline 7eeee2c068afd6af55e93378f6312e7e https://www.encodeproject.org/files/ENCFF336VPJ/@@download/ENCFF336VPJ.bigWig GRCh38 released antibody characterized with exemption ENCFF927USB bigWig signal p-value ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF405FFP 462114731 ENCODE Processing Pipeline 88f391d375fcb5ced64089c79a34f097 https://www.encodeproject.org/files/ENCFF927USB/@@download/ENCFF927USB.bigWig GRCh38 released antibody characterized with exemption ENCFF792LMU bigWig fold change over control ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF707MEF 588185812 ENCODE Processing Pipeline ef3b8b059e0708783a457dc67910c722 https://www.encodeproject.org/files/ENCFF792LMU/@@download/ENCFF792LMU.bigWig GRCh38 released antibody characterized with exemption ENCFF956XKB bigWig fold change over control ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF405FFP 481361950 ENCODE Processing Pipeline 6a6bcec7dea3253831aec84dda578d75 https://www.encodeproject.org/files/ENCFF956XKB/@@download/ENCFF956XKB.bigWig GRCh38 released antibody characterized with exemption ENCFF127MNH bigWig fold change over control ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF405FFP, ENCFF707MEF 909145833 ENCODE Processing Pipeline cbaf9ce60ecd64c00abaee9194bcf1bf https://www.encodeproject.org/files/ENCFF127MNH/@@download/ENCFF127MNH.bigWig GRCh38 released antibody characterized with exemption ENCFF566FRU bed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF707MEF 5742365 ENCODE Processing Pipeline 030263a5676982c7c10a4f19585aaa79 https://www.encodeproject.org/files/ENCFF566FRU/@@download/ENCFF566FRU.bed.gz GRCh38 released antibody characterized with exemption ENCFF574WMJ bed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF405FFP, ENCFF707MEF 6398493 ENCODE Processing Pipeline 43e8b31992c7958214202043cb8d1bad https://www.encodeproject.org/files/ENCFF574WMJ/@@download/ENCFF574WMJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF328UHH bed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF405FFP 5399348 ENCODE Processing Pipeline 9f7cec5dd6cdc4e6a83cd7e46167465f https://www.encodeproject.org/files/ENCFF328UHH/@@download/ENCFF328UHH.bed.gz GRCh38 released antibody characterized with exemption ENCFF302FFR bigBed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF566FRU 13273719 ENCODE Processing Pipeline 23201f46cd364d77fdb0221d5382cb08 https://www.encodeproject.org/files/ENCFF302FFR/@@download/ENCFF302FFR.bigBed GRCh38 released antibody characterized with exemption ENCFF844BHB bigBed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF328UHH 13276845 ENCODE Processing Pipeline ea759030d3d89c549e38eedca3cc59ad https://www.encodeproject.org/files/ENCFF844BHB/@@download/ENCFF844BHB.bigBed GRCh38 released antibody characterized with exemption ENCFF163JRA bigBed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF574WMJ 13363835 ENCODE Processing Pipeline c7044c2e491f75fb3c4b2568ae5029bf https://www.encodeproject.org/files/ENCFF163JRA/@@download/ENCFF163JRA.bigBed GRCh38 released antibody characterized with exemption ENCFF284NPD bed narrowPeak conservative idr thresholded peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF328UHH, ENCFF419RSJ, ENCFF566FRU, ENCFF574WMJ 272879 ENCODE Processing Pipeline e9e3096966b484a6e2efa564a09f6b8e https://www.encodeproject.org/files/ENCFF284NPD/@@download/ENCFF284NPD.bed.gz GRCh38 released antibody characterized with exemption ENCFF571OYS bigBed narrowPeak conservative idr thresholded peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF284NPD 497001 ENCODE Processing Pipeline 3a77d018c773e91bbef403ff6d8fe8a9 https://www.encodeproject.org/files/ENCFF571OYS/@@download/ENCFF571OYS.bigBed GRCh38 released antibody characterized with exemption ENCFF232WMR bed narrowPeak optimal idr thresholded peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF328UHH, ENCFF419RSJ, ENCFF566FRU, ENCFF574WMJ 280586 ENCODE Processing Pipeline 92474e4326ce8decf57395bba18f1df3 https://www.encodeproject.org/files/ENCFF232WMR/@@download/ENCFF232WMR.bed.gz GRCh38 released antibody characterized with exemption ENCFF613URD bigBed narrowPeak optimal idr thresholded peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF232WMR 614717 ENCODE Processing Pipeline 14d0314fc912e941719073351eb88475 https://www.encodeproject.org/files/ENCFF613URD/@@download/ENCFF613URD.bigBed GRCh38 released antibody characterized with exemption ENCFF469BXD bigWig signal p-value ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF646JVE 1282647774 ENCODE Processing Pipeline fedffc28fe6da759d0c14e969417a395 https://www.encodeproject.org/files/ENCFF469BXD/@@download/ENCFF469BXD.bigWig hg19 released antibody characterized with exemption ENCFF250SOM bigWig signal p-value ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF739MET 1234261366 ENCODE Processing Pipeline 75fda41de8db7d2d2865b997d6319c81 https://www.encodeproject.org/files/ENCFF250SOM/@@download/ENCFF250SOM.bigWig hg19 released antibody characterized with exemption ENCFF542RWV bigWig signal p-value ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF646JVE, ENCFF739MET 1612038508 ENCODE Processing Pipeline 886b5ca842d8d6dcf58e365b400f9afd https://www.encodeproject.org/files/ENCFF542RWV/@@download/ENCFF542RWV.bigWig hg19 released antibody characterized with exemption ENCFF429TNC bigWig fold change over control ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF646JVE 1018854697 ENCODE Processing Pipeline e6f26cb7ba8dd80c296908a18bad98e5 https://www.encodeproject.org/files/ENCFF429TNC/@@download/ENCFF429TNC.bigWig hg19 released antibody characterized with exemption ENCFF396SYX bigWig fold change over control ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF739MET 916875784 ENCODE Processing Pipeline ad77b7527857dce823367135eab3f1c9 https://www.encodeproject.org/files/ENCFF396SYX/@@download/ENCFF396SYX.bigWig hg19 released antibody characterized with exemption ENCFF276RTX bigWig fold change over control ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF646JVE, ENCFF739MET 1457798956 ENCODE Processing Pipeline 3d696ae5151ecc27ad351ceba720b6d1 https://www.encodeproject.org/files/ENCFF276RTX/@@download/ENCFF276RTX.bigWig hg19 released antibody characterized with exemption ENCFF409MWH bed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF646JVE 6453966 ENCODE Processing Pipeline 6f7abd79e442de86cae2d5492382a014 https://www.encodeproject.org/files/ENCFF409MWH/@@download/ENCFF409MWH.bed.gz hg19 released antibody characterized with exemption ENCFF908VCH bed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF739MET 6247113 ENCODE Processing Pipeline da189223a005217fb5c2881d257510e7 https://www.encodeproject.org/files/ENCFF908VCH/@@download/ENCFF908VCH.bed.gz hg19 released antibody characterized with exemption ENCFF048IUI bed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF646JVE, ENCFF739MET 6890456 ENCODE Processing Pipeline c324baec9b747db23a9e69f83b647654 https://www.encodeproject.org/files/ENCFF048IUI/@@download/ENCFF048IUI.bed.gz hg19 released antibody characterized with exemption ENCFF301QLW bigBed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF908VCH 13431013 ENCODE Processing Pipeline a012b43a82d5255eb2fd25e6c7ca372a https://www.encodeproject.org/files/ENCFF301QLW/@@download/ENCFF301QLW.bigBed hg19 released antibody characterized with exemption ENCFF145ZZQ bigBed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF409MWH 13357308 ENCODE Processing Pipeline 5cf91958c3749bde9bf9b50bfbb4c1f5 https://www.encodeproject.org/files/ENCFF145ZZQ/@@download/ENCFF145ZZQ.bigBed hg19 released antibody characterized with exemption ENCFF681MLY bigBed narrowPeak peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF048IUI 13298138 ENCODE Processing Pipeline dd1a541f16c69e37a3c4e45d7b4bd96a https://www.encodeproject.org/files/ENCFF681MLY/@@download/ENCFF681MLY.bigBed hg19 released antibody characterized with exemption ENCFF097GQF bed narrowPeak conservative idr thresholded peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF048IUI, ENCFF409MWH, ENCFF908VCH 249444 ENCODE Processing Pipeline 76f3ba4b997008103d90a651be866d50 https://www.encodeproject.org/files/ENCFF097GQF/@@download/ENCFF097GQF.bed.gz hg19 released antibody characterized with exemption ENCFF883YNO bed narrowPeak optimal idr thresholded peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF048IUI, ENCFF409MWH, ENCFF908VCH 265326 ENCODE Processing Pipeline 45d570958ee37878e149aa6dfcd84504 https://www.encodeproject.org/files/ENCFF883YNO/@@download/ENCFF883YNO.bed.gz hg19 released antibody characterized with exemption ENCFF211AXQ bigBed narrowPeak conservative idr thresholded peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF097GQF 470957 ENCODE Processing Pipeline 5dcab0dd32eae0dd4ee5034cb2eeacda https://www.encodeproject.org/files/ENCFF211AXQ/@@download/ENCFF211AXQ.bigBed hg19 released antibody characterized with exemption ENCFF242PTN bigBed narrowPeak optimal idr thresholded peaks ENCSR125DAD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MLX-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF883YNO 492157 ENCODE Processing Pipeline 57230ce36294a02af98048c921562168 https://www.encodeproject.org/files/ENCFF242PTN/@@download/ENCFF242PTN.bigBed hg19 released antibody characterized with exemption ENCFF096ZDV fastq reads ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1150001557 Richard Myers, HAIB 7760d83e8b57c4d994c595cf344da3ee SRA:SRR5339246 https://www.encodeproject.org/files/ENCFF096ZDV/@@download/ENCFF096ZDV.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF158NYT fastq reads ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1128293897 Richard Myers, HAIB 598d9e266a093f57beee09123fe62b90 SRA:SRR5339245 https://www.encodeproject.org/files/ENCFF158NYT/@@download/ENCFF158NYT.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF916QTN bam unfiltered alignments ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF158NYT, ENCFF643CGH 1376319275 ENCODE Processing Pipeline 5fddba4a92de6fa9084e29efa3b8ded2 https://www.encodeproject.org/files/ENCFF916QTN/@@download/ENCFF916QTN.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF132JHZ bam unfiltered alignments ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF096ZDV, ENCFF643CGH 1385131824 ENCODE Processing Pipeline 6326610b39ab89ab1b8c8a498d9b7838 https://www.encodeproject.org/files/ENCFF132JHZ/@@download/ENCFF132JHZ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF972SOH bam unfiltered alignments ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF158NYT, ENCFF807MUK 1372099280 ENCODE Processing Pipeline 6d2340a93a2615219976a05232e11da7 https://www.encodeproject.org/files/ENCFF972SOH/@@download/ENCFF972SOH.bam hg19 released antibody characterized with exemption, low read depth ENCFF844DSF bam unfiltered alignments ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF096ZDV, ENCFF807MUK 1380538399 ENCODE Processing Pipeline d138c56d0924219ac00704c761e6d36f https://www.encodeproject.org/files/ENCFF844DSF/@@download/ENCFF844DSF.bam hg19 released antibody characterized with exemption, low read depth ENCFF953PIE bam alignments ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF096ZDV, ENCFF643CGH 1063126377 ENCODE Processing Pipeline d51d0b230939a69165560ace03031b4c https://www.encodeproject.org/files/ENCFF953PIE/@@download/ENCFF953PIE.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF417TWE bam alignments ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF158NYT, ENCFF643CGH 1051152011 ENCODE Processing Pipeline 8f95e2600705c4416138bda2cea60ef6 https://www.encodeproject.org/files/ENCFF417TWE/@@download/ENCFF417TWE.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF616BTZ bam alignments ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF096ZDV, ENCFF807MUK 1061929131 ENCODE Processing Pipeline db6fce2b46572d3329f15a48b4410305 https://www.encodeproject.org/files/ENCFF616BTZ/@@download/ENCFF616BTZ.bam hg19 released antibody characterized with exemption, low read depth ENCFF851OMU bam alignments ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF158NYT, ENCFF807MUK 1050260466 ENCODE Processing Pipeline c439c3d26d8e2b1eef81d0710c1039f9 https://www.encodeproject.org/files/ENCFF851OMU/@@download/ENCFF851OMU.bam hg19 released antibody characterized with exemption, low read depth ENCFF530FQU bigWig signal p-value ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF953PIE 454960460 ENCODE Processing Pipeline 9f6807f48020784119f57905c6d27ef6 https://www.encodeproject.org/files/ENCFF530FQU/@@download/ENCFF530FQU.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF880PWR bigWig signal p-value ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF417TWE 459585689 ENCODE Processing Pipeline f84eb2afd04e9ad777c39e77df3369ad https://www.encodeproject.org/files/ENCFF880PWR/@@download/ENCFF880PWR.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF215WTV bigWig signal p-value ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF417TWE, ENCFF953PIE 680646969 ENCODE Processing Pipeline 70ce205c5ab9f1f0aa94af500a062621 https://www.encodeproject.org/files/ENCFF215WTV/@@download/ENCFF215WTV.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF572YKR bigWig fold change over control ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF417TWE 382095865 ENCODE Processing Pipeline df22ce8c86b307430302a7ef7c1e26d4 https://www.encodeproject.org/files/ENCFF572YKR/@@download/ENCFF572YKR.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF179MGX bigWig fold change over control ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF953PIE 463511867 ENCODE Processing Pipeline 47b65a870d1436cc9b20e14212b8ecb9 https://www.encodeproject.org/files/ENCFF179MGX/@@download/ENCFF179MGX.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF555CAR bed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF953PIE 5204779 ENCODE Processing Pipeline 6b8e487e895b7d94bd3931b731d6e40e https://www.encodeproject.org/files/ENCFF555CAR/@@download/ENCFF555CAR.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF573WUB bigWig fold change over control ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF417TWE, ENCFF953PIE 703726262 ENCODE Processing Pipeline f8de4209894729efd73297a99d3da87b https://www.encodeproject.org/files/ENCFF573WUB/@@download/ENCFF573WUB.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF816UCP bed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF417TWE, ENCFF953PIE 3860561 ENCODE Processing Pipeline cfa9064c88377417e6ee1f3241138342 https://www.encodeproject.org/files/ENCFF816UCP/@@download/ENCFF816UCP.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF118XJU bed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF417TWE 4564501 ENCODE Processing Pipeline 18f22e7eae932532730781d1c1e6513a https://www.encodeproject.org/files/ENCFF118XJU/@@download/ENCFF118XJU.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF786ARO bigBed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF555CAR 13241983 ENCODE Processing Pipeline 83c216f9019153a180e22422004bfc6b https://www.encodeproject.org/files/ENCFF786ARO/@@download/ENCFF786ARO.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF709DKY bigBed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF118XJU 10866417 ENCODE Processing Pipeline 37775ed107e546c86428542f18d66c05 https://www.encodeproject.org/files/ENCFF709DKY/@@download/ENCFF709DKY.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF492YUE bed narrowPeak conservative idr thresholded peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF118XJU, ENCFF419RSJ, ENCFF555CAR, ENCFF816UCP 92416 ENCODE Processing Pipeline 5356e15fde55c322daf10cabfc3b7c42 https://www.encodeproject.org/files/ENCFF492YUE/@@download/ENCFF492YUE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF108SWW bigBed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF816UCP 8861778 ENCODE Processing Pipeline 1cf5b9c633730da4a678cd514671725b https://www.encodeproject.org/files/ENCFF108SWW/@@download/ENCFF108SWW.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF219KQD bed narrowPeak optimal idr thresholded peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF118XJU, ENCFF419RSJ, ENCFF555CAR, ENCFF816UCP 96642 ENCODE Processing Pipeline 37d4ec54e1348b58a00981165750e36b https://www.encodeproject.org/files/ENCFF219KQD/@@download/ENCFF219KQD.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF530TAN bigBed narrowPeak conservative idr thresholded peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF492YUE 241716 ENCODE Processing Pipeline 840f8e89a9fb53bf463b5ebdff300f3d https://www.encodeproject.org/files/ENCFF530TAN/@@download/ENCFF530TAN.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF211OJQ bigBed narrowPeak optimal idr thresholded peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF219KQD 249540 ENCODE Processing Pipeline c2e1161893a9e19b96777c65ea6b51bf https://www.encodeproject.org/files/ENCFF211OJQ/@@download/ENCFF211OJQ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF219KRX bigWig signal p-value ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF616BTZ 1204877010 ENCODE Processing Pipeline 803ee2c454240a909b59c792d5af4448 https://www.encodeproject.org/files/ENCFF219KRX/@@download/ENCFF219KRX.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF544JVV bigWig signal p-value ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF851OMU 1189178254 ENCODE Processing Pipeline 8b44d99e8546d8c8557f0c39115735fd https://www.encodeproject.org/files/ENCFF544JVV/@@download/ENCFF544JVV.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF077JJL bigWig signal p-value ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF616BTZ, ENCFF851OMU 1305954756 ENCODE Processing Pipeline 0302c13810ce72d8a31d949336252327 https://www.encodeproject.org/files/ENCFF077JJL/@@download/ENCFF077JJL.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF848MUF bigWig fold change over control ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF616BTZ 793823988 ENCODE Processing Pipeline 2e8707ac8ecca5cdf49267ffb42ffc9f https://www.encodeproject.org/files/ENCFF848MUF/@@download/ENCFF848MUF.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF494PFO bigWig fold change over control ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF851OMU 742707194 ENCODE Processing Pipeline 4c815a85487c1626b853bd1bd4345336 https://www.encodeproject.org/files/ENCFF494PFO/@@download/ENCFF494PFO.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF164AVP bigWig fold change over control ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF616BTZ, ENCFF851OMU 1199914024 ENCODE Processing Pipeline 631c0616f9acc902b6e7a10e31b5d638 https://www.encodeproject.org/files/ENCFF164AVP/@@download/ENCFF164AVP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF720MSK bed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF851OMU 5278336 ENCODE Processing Pipeline f7e369c1ef6322eb8a5914d6b9f6a4bc https://www.encodeproject.org/files/ENCFF720MSK/@@download/ENCFF720MSK.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF971XWG bed narrowPeak conservative idr thresholded peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF256UTK, ENCFF720MSK, ENCFF814AHA 92121 ENCODE Processing Pipeline c9c9f82bdc66bcef396d056fb396614d https://www.encodeproject.org/files/ENCFF971XWG/@@download/ENCFF971XWG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF057KCR bigBed narrowPeak conservative idr thresholded peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF971XWG 199486 ENCODE Processing Pipeline c0d17a8e005f5dbf6c84dd0fe794269b https://www.encodeproject.org/files/ENCFF057KCR/@@download/ENCFF057KCR.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF256UTK bed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF616BTZ 6125036 ENCODE Processing Pipeline f2736f9429eb78e9bc837e77e6f79815 https://www.encodeproject.org/files/ENCFF256UTK/@@download/ENCFF256UTK.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF653VQI bigBed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF814AHA 13543676 ENCODE Processing Pipeline 59ee2091d83bf346c5f70646b705ff0a https://www.encodeproject.org/files/ENCFF653VQI/@@download/ENCFF653VQI.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF814AHA bed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF616BTZ, ENCFF851OMU 6598559 ENCODE Processing Pipeline b7a8c964ad238408e35f13e8437624d6 https://www.encodeproject.org/files/ENCFF814AHA/@@download/ENCFF814AHA.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF925VUE bigBed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF256UTK 13458753 ENCODE Processing Pipeline a878287a5b964d367b62ad253d06eaa9 https://www.encodeproject.org/files/ENCFF925VUE/@@download/ENCFF925VUE.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF747DSG bigBed narrowPeak peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF720MSK 11288076 ENCODE Processing Pipeline cd1b89abf287e11f70a2fe4870a4bd04 https://www.encodeproject.org/files/ENCFF747DSG/@@download/ENCFF747DSG.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF003IPS bed narrowPeak optimal idr thresholded peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF256UTK, ENCFF720MSK, ENCFF814AHA 95590 ENCODE Processing Pipeline a257ff36c4713239dd04cd1b7758fa23 https://www.encodeproject.org/files/ENCFF003IPS/@@download/ENCFF003IPS.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF826PEG bigBed narrowPeak optimal idr thresholded peaks ENCSR745VSQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GMEB2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF003IPS 203892 ENCODE Processing Pipeline 1dbfe6c9a4abea925075261e4b8c242e https://www.encodeproject.org/files/ENCFF826PEG/@@download/ENCFF826PEG.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF296DPR fastq reads ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 1 50 single-ended 1245481885 Richard Myers, HAIB ff9ab5a35a9948e6812eba0de6c07cb6 SRA:SRR6212924 https://www.encodeproject.org/files/ENCFF296DPR/@@download/ENCFF296DPR.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released inconsistent control read length, antibody characterized with exemption, low read depth ENCFF656IHM fastq reads ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 1 50 single-ended 928023841 Richard Myers, HAIB 84005dc7217df49670ef14c7b9da6b82 SRA:SRR6212923 https://www.encodeproject.org/files/ENCFF656IHM/@@download/ENCFF656IHM.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released inconsistent control read length, antibody characterized with exemption, low read depth ENCFF603CIW bam unfiltered alignments ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 50 ENCFF643CGH, ENCFF656IHM 1062769032 ENCODE Processing Pipeline 569f7f71a61e902ed82da75839115762 https://www.encodeproject.org/files/ENCFF603CIW/@@download/ENCFF603CIW.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF728SLT bam unfiltered alignments ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 50 ENCFF296DPR, ENCFF643CGH 1407486418 ENCODE Processing Pipeline 5d0f74dfe927c7cc215b1802af4b0fd4 https://www.encodeproject.org/files/ENCFF728SLT/@@download/ENCFF728SLT.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF569SUT bam unfiltered alignments ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 50 ENCFF656IHM, ENCFF807MUK 1059215337 ENCODE Processing Pipeline 82ffa137c8a7b542508e4a695441ff68 https://www.encodeproject.org/files/ENCFF569SUT/@@download/ENCFF569SUT.bam hg19 released antibody characterized with exemption, low read depth ENCFF127FFH bam alignments ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 50 ENCFF643CGH, ENCFF656IHM 832241361 ENCODE Processing Pipeline b8380095939caf492e368b4756b49f84 https://www.encodeproject.org/files/ENCFF127FFH/@@download/ENCFF127FFH.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF859TFA bam unfiltered alignments ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 50 ENCFF296DPR, ENCFF807MUK 1402533666 ENCODE Processing Pipeline a5c472d0daad7a69492311ce533b1f8e https://www.encodeproject.org/files/ENCFF859TFA/@@download/ENCFF859TFA.bam hg19 released antibody characterized with exemption, low read depth ENCFF465AXY bam alignments ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 50 ENCFF656IHM, ENCFF807MUK 832335548 ENCODE Processing Pipeline 4a80bc8b5ff02918eef6715d0970af03 https://www.encodeproject.org/files/ENCFF465AXY/@@download/ENCFF465AXY.bam hg19 released antibody characterized with exemption, low read depth ENCFF919JRJ bam alignments ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 50 ENCFF296DPR, ENCFF807MUK 1084252405 ENCODE Processing Pipeline b481c04cfdc847ced9ee0a7c8d9a660f https://www.encodeproject.org/files/ENCFF919JRJ/@@download/ENCFF919JRJ.bam hg19 released antibody characterized with exemption, low read depth ENCFF581GQK bam alignments ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 50 ENCFF296DPR, ENCFF643CGH 1084142910 ENCODE Processing Pipeline 45ee6ee0aeb9609c714bb06674e34692 https://www.encodeproject.org/files/ENCFF581GQK/@@download/ENCFF581GQK.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF930SDS bigWig signal p-value ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 ENCFF127FFH 524287239 ENCODE Processing Pipeline b0dbe966de089adb8713baa2af733788 https://www.encodeproject.org/files/ENCFF930SDS/@@download/ENCFF930SDS.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF670XWO bigWig fold change over control ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 ENCFF127FFH 422471558 ENCODE Processing Pipeline 40770755d0bc7237cdb5e3c725ecb402 https://www.encodeproject.org/files/ENCFF670XWO/@@download/ENCFF670XWO.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF197FAS bigWig signal p-value ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 ENCFF581GQK 532512261 ENCODE Processing Pipeline 34ce56e656b73a3a95469b30db496df4 https://www.encodeproject.org/files/ENCFF197FAS/@@download/ENCFF197FAS.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF124BUY bigWig signal p-value ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF127FFH, ENCFF581GQK 646725578 ENCODE Processing Pipeline 59fb3bc7076516437698be7a184ebb58 https://www.encodeproject.org/files/ENCFF124BUY/@@download/ENCFF124BUY.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF864GEM bigWig fold change over control ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 ENCFF581GQK 508488037 ENCODE Processing Pipeline b1e80e6e843a5a9f907cf2f7632dc64c https://www.encodeproject.org/files/ENCFF864GEM/@@download/ENCFF864GEM.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF296KGM bigWig fold change over control ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF127FFH, ENCFF581GQK 799477470 ENCODE Processing Pipeline 6967139255a4e360f8e3f9f1c85fa9b2 https://www.encodeproject.org/files/ENCFF296KGM/@@download/ENCFF296KGM.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF700XUG bed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 ENCFF127FFH 5928637 ENCODE Processing Pipeline c61d8bad22c9bd49ff3788731c7e948d https://www.encodeproject.org/files/ENCFF700XUG/@@download/ENCFF700XUG.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF755JSV bed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 ENCFF581GQK 6029841 ENCODE Processing Pipeline f0f5f7e98a6e28dd8a90290b192bf58c https://www.encodeproject.org/files/ENCFF755JSV/@@download/ENCFF755JSV.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF471LSV bed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF127FFH, ENCFF581GQK 6688821 ENCODE Processing Pipeline 77fcf4d7a13b8e168ac57e9443f5b767 https://www.encodeproject.org/files/ENCFF471LSV/@@download/ENCFF471LSV.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF359STX bigBed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 ENCFF700XUG 13134284 ENCODE Processing Pipeline 877cbab7aad7b73f861015170bcf171f https://www.encodeproject.org/files/ENCFF359STX/@@download/ENCFF359STX.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF616YYQ bigBed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 ENCFF755JSV 13183949 ENCODE Processing Pipeline e77d35222c1d11ef1a209fb0038d5faa https://www.encodeproject.org/files/ENCFF616YYQ/@@download/ENCFF616YYQ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF799EUB bigBed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF471LSV 13150490 ENCODE Processing Pipeline 5a822bdd50e07a4bf20a5edbe4edcd40 https://www.encodeproject.org/files/ENCFF799EUB/@@download/ENCFF799EUB.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF113GDJ bed narrowPeak conservative idr thresholded peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF471LSV, ENCFF700XUG, ENCFF755JSV 141899 ENCODE Processing Pipeline bfb6d26e637918ab8f6a98a7d8db76e5 https://www.encodeproject.org/files/ENCFF113GDJ/@@download/ENCFF113GDJ.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF573WGP bigBed narrowPeak conservative idr thresholded peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF113GDJ 302404 ENCODE Processing Pipeline 9faa475eb0def428dcfdd9ea7f52c961 https://www.encodeproject.org/files/ENCFF573WGP/@@download/ENCFF573WGP.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF845MDX bed narrowPeak optimal idr thresholded peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF471LSV, ENCFF700XUG, ENCFF755JSV 161009 ENCODE Processing Pipeline 4d315e2072da9802cc808fd975de19f1 https://www.encodeproject.org/files/ENCFF845MDX/@@download/ENCFF845MDX.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF934ZLO bigBed narrowPeak optimal idr thresholded peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF845MDX 329400 ENCODE Processing Pipeline 8c54be8ebecce9f27511158ef4a22ecd https://www.encodeproject.org/files/ENCFF934ZLO/@@download/ENCFF934ZLO.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF336PWR bigWig fold change over control ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF465AXY, ENCFF919JRJ 787560639 ENCODE Processing Pipeline ee4659a56def9a3cf85130747b29d202 https://www.encodeproject.org/files/ENCFF336PWR/@@download/ENCFF336PWR.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF363YVH bed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 ENCFF196CDN, ENCFF465AXY 5932161 ENCODE Processing Pipeline ab7e414613dcace052d721b2ffdde662 https://www.encodeproject.org/files/ENCFF363YVH/@@download/ENCFF363YVH.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF103OKZ bigWig fold change over control ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 ENCFF465AXY 410514944 ENCODE Processing Pipeline 54c9693340c0034f6b95d4aaabe782b4 https://www.encodeproject.org/files/ENCFF103OKZ/@@download/ENCFF103OKZ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF393KLI bed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF196CDN, ENCFF465AXY, ENCFF919JRJ 6731966 ENCODE Processing Pipeline 694d08c68a714f0aa07cc9af0fd9d6cc https://www.encodeproject.org/files/ENCFF393KLI/@@download/ENCFF393KLI.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF202EIZ bigBed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 ENCFF642EEJ 13142874 ENCODE Processing Pipeline 3d901206f6074e2263990848fc4ae4b1 https://www.encodeproject.org/files/ENCFF202EIZ/@@download/ENCFF202EIZ.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF868KNP bigBed narrowPeak optimal idr thresholded peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF609WOU 327086 ENCODE Processing Pipeline 4ed9c7d6e2c4b410805d993fd2a25808 https://www.encodeproject.org/files/ENCFF868KNP/@@download/ENCFF868KNP.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF223SET bigWig signal p-value ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 ENCFF465AXY 512061831 ENCODE Processing Pipeline ed25c6e93f882f37cde77c89980e711f https://www.encodeproject.org/files/ENCFF223SET/@@download/ENCFF223SET.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF903EDA bigBed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF393KLI 13134230 ENCODE Processing Pipeline 6f05ebc6517177ff603b43900f70fc02 https://www.encodeproject.org/files/ENCFF903EDA/@@download/ENCFF903EDA.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF290GSN bigWig signal p-value ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF465AXY, ENCFF919JRJ 637442285 ENCODE Processing Pipeline 4c91960d66d07deec83323bac61bf70a https://www.encodeproject.org/files/ENCFF290GSN/@@download/ENCFF290GSN.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF927XWS bigBed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1 ENCFF363YVH 13135076 ENCODE Processing Pipeline 0d5ccc71b6903dd00db5906400585550 https://www.encodeproject.org/files/ENCFF927XWS/@@download/ENCFF927XWS.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF609WOU bed narrowPeak optimal idr thresholded peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF001TDO, ENCFF363YVH, ENCFF393KLI, ENCFF642EEJ 159675 ENCODE Processing Pipeline 03c98b7c4b415a53bd0155369a2c64a3 https://www.encodeproject.org/files/ENCFF609WOU/@@download/ENCFF609WOU.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF948SBT bigWig signal p-value ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 ENCFF919JRJ 522387847 ENCODE Processing Pipeline 0694fed92eeb5a77c02b25d7894bf0ef https://www.encodeproject.org/files/ENCFF948SBT/@@download/ENCFF948SBT.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF134SIP bigWig fold change over control ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 ENCFF919JRJ 498611710 ENCODE Processing Pipeline 7bf75e2c1964d8b5d62c74a51e7c8acb https://www.encodeproject.org/files/ENCFF134SIP/@@download/ENCFF134SIP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF815VNN bed narrowPeak conservative idr thresholded peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF001TDO, ENCFF363YVH, ENCFF393KLI, ENCFF642EEJ 141252 ENCODE Processing Pipeline 32bcf4a6b1af123ba12259ac55d503a0 https://www.encodeproject.org/files/ENCFF815VNN/@@download/ENCFF815VNN.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF437JGO bigBed narrowPeak conservative idr thresholded peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 1, 2 ENCFF815VNN 299932 ENCODE Processing Pipeline 15702ebaee115b0c1d23f733cd26a7b3 https://www.encodeproject.org/files/ENCFF437JGO/@@download/ENCFF437JGO.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF642EEJ bed narrowPeak peaks ENCSR182QWU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2017-03-16 ENCODE 2 ENCFF196CDN, ENCFF919JRJ 5986896 ENCODE Processing Pipeline 9f7a2a771c19c79799faaf794076b3d0 https://www.encodeproject.org/files/ENCFF642EEJ/@@download/ENCFF642EEJ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF703VJZ fastq reads ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1533980297 Richard Myers, HAIB 0a344be8607434655c97039db1bc82ae SRA:SRR5338903 https://www.encodeproject.org/files/ENCFF703VJZ/@@download/ENCFF703VJZ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF974TAR fastq reads ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1739179056 Richard Myers, HAIB 57480f804badeb78daaa7f143ed763a5 SRA:SRR5338902 https://www.encodeproject.org/files/ENCFF974TAR/@@download/ENCFF974TAR.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF452YXR bam unfiltered alignments ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF703VJZ 1650303325 ENCODE Processing Pipeline e8e78908232af68c25bea869f3e9a101 https://www.encodeproject.org/files/ENCFF452YXR/@@download/ENCFF452YXR.bam GRCh38 released antibody characterized with exemption ENCFF990TVD bam unfiltered alignments ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF974TAR 1841348293 ENCODE Processing Pipeline c256c701f27455138e78ad6d906aea74 https://www.encodeproject.org/files/ENCFF990TVD/@@download/ENCFF990TVD.bam hg19 released antibody characterized with exemption ENCFF308LVZ bam unfiltered alignments ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF974TAR 1844946113 ENCODE Processing Pipeline 1cc9bd2dbc4afb46bc243ab1184f3196 https://www.encodeproject.org/files/ENCFF308LVZ/@@download/ENCFF308LVZ.bam GRCh38 released antibody characterized with exemption ENCFF789JAG bam unfiltered alignments ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF703VJZ, ENCFF807MUK 1647376005 ENCODE Processing Pipeline f7cc590e79aa55054c311203ed6ec531 https://www.encodeproject.org/files/ENCFF789JAG/@@download/ENCFF789JAG.bam hg19 released antibody characterized with exemption ENCFF211PNG bam alignments ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF703VJZ 1310429502 ENCODE Processing Pipeline df3f74e177b547ef1f5af82d20f5ee3f https://www.encodeproject.org/files/ENCFF211PNG/@@download/ENCFF211PNG.bam GRCh38 released antibody characterized with exemption ENCFF869KFS bam alignments ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF974TAR 1432560498 ENCODE Processing Pipeline b251cff34bbc740a0e8287f6313e22d1 https://www.encodeproject.org/files/ENCFF869KFS/@@download/ENCFF869KFS.bam GRCh38 released antibody characterized with exemption ENCFF727JMT bam alignments ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF703VJZ, ENCFF807MUK 1309970801 ENCODE Processing Pipeline 826d2393f709066ce2e43444052db5b4 https://www.encodeproject.org/files/ENCFF727JMT/@@download/ENCFF727JMT.bam hg19 released antibody characterized with exemption ENCFF414LDK bam alignments ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF974TAR 1431942198 ENCODE Processing Pipeline 2e063e2719a44469d50e75f09c777e7e https://www.encodeproject.org/files/ENCFF414LDK/@@download/ENCFF414LDK.bam hg19 released antibody characterized with exemption ENCFF485LAX bigWig signal p-value ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF211PNG 528834403 ENCODE Processing Pipeline 91dcbc3459981c30aea228dc5cb127c6 https://www.encodeproject.org/files/ENCFF485LAX/@@download/ENCFF485LAX.bigWig GRCh38 released antibody characterized with exemption ENCFF457NLY bigWig signal p-value ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF211PNG, ENCFF869KFS 652196012 ENCODE Processing Pipeline cbee79e5eb4b9edcdc53bf698e1b8b5c https://www.encodeproject.org/files/ENCFF457NLY/@@download/ENCFF457NLY.bigWig GRCh38 released antibody characterized with exemption ENCFF054SEQ bigWig signal p-value ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF869KFS 494704052 ENCODE Processing Pipeline 6e489179648bc4eb83acb17a9b006248 https://www.encodeproject.org/files/ENCFF054SEQ/@@download/ENCFF054SEQ.bigWig GRCh38 released antibody characterized with exemption ENCFF760DGU bigWig fold change over control ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF211PNG 505210440 ENCODE Processing Pipeline 1e0aeb0e81939a4cbb76e1f93b43979d https://www.encodeproject.org/files/ENCFF760DGU/@@download/ENCFF760DGU.bigWig GRCh38 released antibody characterized with exemption ENCFF913DCK bigWig fold change over control ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF869KFS 540105023 ENCODE Processing Pipeline a9610fb99d4f52ee3071d6d68ab75889 https://www.encodeproject.org/files/ENCFF913DCK/@@download/ENCFF913DCK.bigWig GRCh38 released antibody characterized with exemption ENCFF479OGO bigWig fold change over control ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF211PNG, ENCFF869KFS 848316973 ENCODE Processing Pipeline 6c1b5fb68fc536862e0020e88c9756d1 https://www.encodeproject.org/files/ENCFF479OGO/@@download/ENCFF479OGO.bigWig GRCh38 released antibody characterized with exemption ENCFF391ONP bed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF869KFS 6019380 ENCODE Processing Pipeline 17cad7a8b9eef1a3de96b4a54ba0c4e7 https://www.encodeproject.org/files/ENCFF391ONP/@@download/ENCFF391ONP.bed.gz GRCh38 released antibody characterized with exemption ENCFF130VUU bed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF211PNG 5981979 ENCODE Processing Pipeline 2ce428e2cb8fbe2fc20ff95922db551e https://www.encodeproject.org/files/ENCFF130VUU/@@download/ENCFF130VUU.bed.gz GRCh38 released antibody characterized with exemption ENCFF987AVT bigBed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF130VUU 13028862 ENCODE Processing Pipeline 083dda9f70231d73fbaee15595787385 https://www.encodeproject.org/files/ENCFF987AVT/@@download/ENCFF987AVT.bigBed GRCh38 released antibody characterized with exemption ENCFF622SUG bed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF211PNG, ENCFF869KFS 6652216 ENCODE Processing Pipeline 6b9a5e291c43575e00d24a578392a558 https://www.encodeproject.org/files/ENCFF622SUG/@@download/ENCFF622SUG.bed.gz GRCh38 released antibody characterized with exemption ENCFF632PYF bigBed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF391ONP 13077008 ENCODE Processing Pipeline d17bbd7202c8cc0a39b8d6b2c5b7be7a https://www.encodeproject.org/files/ENCFF632PYF/@@download/ENCFF632PYF.bigBed GRCh38 released antibody characterized with exemption ENCFF950QXN bigBed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF622SUG 13044183 ENCODE Processing Pipeline f5a4c8f12a07ee10645e366c115a7d68 https://www.encodeproject.org/files/ENCFF950QXN/@@download/ENCFF950QXN.bigBed GRCh38 released antibody characterized with exemption ENCFF608VWO bigBed narrowPeak conservative idr thresholded peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF790ENL 1110401 ENCODE Processing Pipeline ea9a1daaabafb0917f83ea526d119122 https://www.encodeproject.org/files/ENCFF608VWO/@@download/ENCFF608VWO.bigBed GRCh38 released antibody characterized with exemption ENCFF790ENL bed narrowPeak conservative idr thresholded peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF130VUU, ENCFF391ONP, ENCFF419RSJ, ENCFF622SUG 553838 ENCODE Processing Pipeline 2ce53c91568065b2477b11c3bc590a1c https://www.encodeproject.org/files/ENCFF790ENL/@@download/ENCFF790ENL.bed.gz GRCh38 released antibody characterized with exemption ENCFF460HAG bed narrowPeak optimal idr thresholded peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF130VUU, ENCFF391ONP, ENCFF419RSJ, ENCFF622SUG 589255 ENCODE Processing Pipeline 72f69888525fa2233e4687627fd15be9 https://www.encodeproject.org/files/ENCFF460HAG/@@download/ENCFF460HAG.bed.gz GRCh38 released antibody characterized with exemption ENCFF817OFY bigBed narrowPeak optimal idr thresholded peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF460HAG 1163788 ENCODE Processing Pipeline 046860758810835d8805c85570a25bcc https://www.encodeproject.org/files/ENCFF817OFY/@@download/ENCFF817OFY.bigBed GRCh38 released antibody characterized with exemption ENCFF368GCM bigWig signal p-value ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF727JMT 1340752435 ENCODE Processing Pipeline 6c48caa7853e0012992eff894e79b124 https://www.encodeproject.org/files/ENCFF368GCM/@@download/ENCFF368GCM.bigWig hg19 released antibody characterized with exemption ENCFF161YZP bigWig signal p-value ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF414LDK 1379658705 ENCODE Processing Pipeline 922810e974d43602bbc74fed8a8da063 https://www.encodeproject.org/files/ENCFF161YZP/@@download/ENCFF161YZP.bigWig hg19 released antibody characterized with exemption ENCFF533HJI bigWig signal p-value ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF414LDK, ENCFF727JMT 1540620587 ENCODE Processing Pipeline 4c1ef9c20588947c8e7d8df48c85b7a8 https://www.encodeproject.org/files/ENCFF533HJI/@@download/ENCFF533HJI.bigWig hg19 released antibody characterized with exemption ENCFF742XPP bigWig fold change over control ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF727JMT 955676030 ENCODE Processing Pipeline 295148f7bf09719958164cf7b4df2209 https://www.encodeproject.org/files/ENCFF742XPP/@@download/ENCFF742XPP.bigWig hg19 released antibody characterized with exemption ENCFF286TME bigWig fold change over control ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF414LDK 1010996794 ENCODE Processing Pipeline 74cd81a63447e6d422c5ba7057825cb3 https://www.encodeproject.org/files/ENCFF286TME/@@download/ENCFF286TME.bigWig hg19 released antibody characterized with exemption ENCFF602IQI bigWig fold change over control ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF414LDK, ENCFF727JMT 1470291879 ENCODE Processing Pipeline 14df106ce871d09723b2976cbb16b712 https://www.encodeproject.org/files/ENCFF602IQI/@@download/ENCFF602IQI.bigWig hg19 released antibody characterized with exemption ENCFF855GZK bed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF727JMT 6644733 ENCODE Processing Pipeline a3b80b34086a6f1e8b98442731258cfb https://www.encodeproject.org/files/ENCFF855GZK/@@download/ENCFF855GZK.bed.gz hg19 released antibody characterized with exemption ENCFF135ZRF bed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF414LDK 6549088 ENCODE Processing Pipeline f665fb69be027834e35ecbb6fe699834 https://www.encodeproject.org/files/ENCFF135ZRF/@@download/ENCFF135ZRF.bed.gz hg19 released antibody characterized with exemption ENCFF618EJI bigBed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF855GZK 13061984 ENCODE Processing Pipeline f6bf7e2902f0f163c17e69b00d51e186 https://www.encodeproject.org/files/ENCFF618EJI/@@download/ENCFF618EJI.bigBed hg19 released antibody characterized with exemption ENCFF293CHO bed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF414LDK, ENCFF727JMT 6943324 ENCODE Processing Pipeline 2fe3b1bad722d0d413e5cfa4fa451f61 https://www.encodeproject.org/files/ENCFF293CHO/@@download/ENCFF293CHO.bed.gz hg19 released antibody characterized with exemption ENCFF669FCP bigBed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF135ZRF 13085970 ENCODE Processing Pipeline 4b94b85b53e8fe589bec3d6981b2e5ee https://www.encodeproject.org/files/ENCFF669FCP/@@download/ENCFF669FCP.bigBed hg19 released antibody characterized with exemption ENCFF396WIJ bigBed narrowPeak peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF293CHO 13065536 ENCODE Processing Pipeline dc0c53d9b748cde9a3612c5d722d64ed https://www.encodeproject.org/files/ENCFF396WIJ/@@download/ENCFF396WIJ.bigBed hg19 released antibody characterized with exemption ENCFF909FST bed narrowPeak conservative idr thresholded peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF135ZRF, ENCFF293CHO, ENCFF855GZK 558161 ENCODE Processing Pipeline 41f87f3e16f42ea4730d447543fb58c5 https://www.encodeproject.org/files/ENCFF909FST/@@download/ENCFF909FST.bed.gz hg19 released antibody characterized with exemption ENCFF680EQI bed narrowPeak optimal idr thresholded peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF135ZRF, ENCFF293CHO, ENCFF855GZK 584258 ENCODE Processing Pipeline 9d368ef9b978b7bef392898995c638bd https://www.encodeproject.org/files/ENCFF680EQI/@@download/ENCFF680EQI.bed.gz hg19 released antibody characterized with exemption ENCFF099XLK bigBed narrowPeak conservative idr thresholded peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF909FST 928358 ENCODE Processing Pipeline 759f3970ef29a288bf84fbc1fd086e06 https://www.encodeproject.org/files/ENCFF099XLK/@@download/ENCFF099XLK.bigBed hg19 released antibody characterized with exemption ENCFF296IBC bigBed narrowPeak optimal idr thresholded peaks ENCSR497JLX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF680EQI 1207704 ENCODE Processing Pipeline 20835a006bedc0302d0dbb0e5df78f5f https://www.encodeproject.org/files/ENCFF296IBC/@@download/ENCFF296IBC.bigBed hg19 released antibody characterized with exemption ENCFF925BQC fastq reads ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1767657511 Richard Myers, HAIB 3b25362bc60618558be000aeda2edaa8 SRA:SRR5338997 https://www.encodeproject.org/files/ENCFF925BQC/@@download/ENCFF925BQC.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF568WKI fastq reads ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 1484540564 Richard Myers, HAIB 1cd6bae0d802229a1eddf4012a7313cf SRA:SRR5338998 https://www.encodeproject.org/files/ENCFF568WKI/@@download/ENCFF568WKI.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF789MAE bam alignments ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF568WKI, ENCFF807MUK 1265055721 ENCODE Processing Pipeline 7c3f577017337dfc877f035b28801b4b https://www.encodeproject.org/files/ENCFF789MAE/@@download/ENCFF789MAE.bam hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF005ZLD bam alignments ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF807MUK, ENCFF925BQC 1504758971 ENCODE Processing Pipeline a55a079f59b3c5f3bbccb5e282e6647a https://www.encodeproject.org/files/ENCFF005ZLD/@@download/ENCFF005ZLD.bam hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF400ZWW bigWig signal p-value ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF005ZLD, ENCFF023YTY, ENCFF789MAE 436533199 ENCODE Processing Pipeline 1922f2ea0612e9cc10f2aad0ceee95a4 https://www.encodeproject.org/files/ENCFF400ZWW/@@download/ENCFF400ZWW.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF359JIF bigWig signal p-value ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF005ZLD, ENCFF023YTY 466379864 ENCODE Processing Pipeline 49cdc1baebe44cb91b5960d74fb7fe81 https://www.encodeproject.org/files/ENCFF359JIF/@@download/ENCFF359JIF.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF884EGA bigWig fold change over control ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF005ZLD, ENCFF023YTY 568279061 ENCODE Processing Pipeline f5e1d0f3ff69c2b54da2bccd1434e22b https://www.encodeproject.org/files/ENCFF884EGA/@@download/ENCFF884EGA.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF351ZNN bigWig signal p-value ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF789MAE 454696458 ENCODE Processing Pipeline f2ec387473b39fa3f0a7e64ab5cc21ee https://www.encodeproject.org/files/ENCFF351ZNN/@@download/ENCFF351ZNN.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF959XXG bigWig fold change over control ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF789MAE 501714663 ENCODE Processing Pipeline 92c062027756ab88cb9d24182cc9a4e7 https://www.encodeproject.org/files/ENCFF959XXG/@@download/ENCFF959XXG.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF567KLN bed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF005ZLD, ENCFF023YTY, ENCFF789MAE 7216056 ENCODE Processing Pipeline 217feb0ec44dde695d5533d555feae5a https://www.encodeproject.org/files/ENCFF567KLN/@@download/ENCFF567KLN.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF043OFA bigWig fold change over control ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF005ZLD, ENCFF023YTY, ENCFF789MAE 937138685 ENCODE Processing Pipeline a1b76e1ff6f5ecfa2bce5a9321c1704b https://www.encodeproject.org/files/ENCFF043OFA/@@download/ENCFF043OFA.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF281XTE bed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF005ZLD, ENCFF023YTY 6839297 ENCODE Processing Pipeline 475f78b28d4b220cf650b44a21a4dacb https://www.encodeproject.org/files/ENCFF281XTE/@@download/ENCFF281XTE.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF990PLG bigBed narrowPeak optimal idr thresholded peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF068FYV 563277 ENCODE Processing Pipeline 36a68ddac665e5903bb99431e23019bd https://www.encodeproject.org/files/ENCFF990PLG/@@download/ENCFF990PLG.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF654NDU bigBed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF281XTE 12660440 ENCODE Processing Pipeline a8673d021f484d85b099a6d95d48ea58 https://www.encodeproject.org/files/ENCFF654NDU/@@download/ENCFF654NDU.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF883FWT bigBed narrowPeak conservative idr thresholded peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF936VXH 531082 ENCODE Processing Pipeline 234b37a33ec4a72849aea695d5455402 https://www.encodeproject.org/files/ENCFF883FWT/@@download/ENCFF883FWT.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF888ZSX bed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF789MAE 7004253 ENCODE Processing Pipeline fe69473eab30bfaadb16e8913525c417 https://www.encodeproject.org/files/ENCFF888ZSX/@@download/ENCFF888ZSX.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF988GPL bigBed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF567KLN 12421708 ENCODE Processing Pipeline 37a58821ac68158e2e73e262163a7768 https://www.encodeproject.org/files/ENCFF988GPL/@@download/ENCFF988GPL.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF286OYX bigBed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF888ZSX 12367166 ENCODE Processing Pipeline b7e069fe5b5f5c3f9d204f6eebe11662 https://www.encodeproject.org/files/ENCFF286OYX/@@download/ENCFF286OYX.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF936VXH bed narrowPeak conservative idr thresholded peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF281XTE, ENCFF567KLN, ENCFF888ZSX 221404 ENCODE Processing Pipeline 7e92044c756f10aa935c237c7c1f6fb6 https://www.encodeproject.org/files/ENCFF936VXH/@@download/ENCFF936VXH.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF068FYV bed narrowPeak optimal idr thresholded peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF281XTE, ENCFF567KLN, ENCFF888ZSX 239198 ENCODE Processing Pipeline ce2c7a88ed00459978440bfada14685f https://www.encodeproject.org/files/ENCFF068FYV/@@download/ENCFF068FYV.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF102BER bam unfiltered alignments ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF925BQC 1937928461 ENCODE Processing Pipeline 1f5298366de361a105a99358a7a536e9 https://www.encodeproject.org/files/ENCFF102BER/@@download/ENCFF102BER.bam GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF851YBK bam unfiltered alignments ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF568WKI, ENCFF643CGH 1617974865 ENCODE Processing Pipeline 28b88479f49aeab472f6e2246dcd7610 https://www.encodeproject.org/files/ENCFF851YBK/@@download/ENCFF851YBK.bam GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF474NTR bam alignments ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF925BQC 1504686242 ENCODE Processing Pipeline 5d928cf801b833f529572456dd255dce https://www.encodeproject.org/files/ENCFF474NTR/@@download/ENCFF474NTR.bam GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF746BQO bam alignments ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF568WKI, ENCFF643CGH 1264796730 ENCODE Processing Pipeline 2db9e003a801e1b8a5a1433612d61094 https://www.encodeproject.org/files/ENCFF746BQO/@@download/ENCFF746BQO.bam GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF147HRE bigWig signal p-value ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF474NTR, ENCFF582CVJ 469937320 ENCODE Processing Pipeline 0abd4ef6b44c3f9564796c87c89c5803 https://www.encodeproject.org/files/ENCFF147HRE/@@download/ENCFF147HRE.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF967ILG bigWig signal p-value ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF746BQO 456314832 ENCODE Processing Pipeline bad2e06452e85887a362ccef104e00b3 https://www.encodeproject.org/files/ENCFF967ILG/@@download/ENCFF967ILG.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF636JHS bigWig signal p-value ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF474NTR, ENCFF582CVJ, ENCFF746BQO 432780503 ENCODE Processing Pipeline 997f53faa3e583eb10c6fad137820979 https://www.encodeproject.org/files/ENCFF636JHS/@@download/ENCFF636JHS.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF290NAA bigWig fold change over control ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF474NTR, ENCFF582CVJ 591646163 ENCODE Processing Pipeline 27b56e597fa9ae420cd55f481a24acd3 https://www.encodeproject.org/files/ENCFF290NAA/@@download/ENCFF290NAA.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF511QYV bigWig fold change over control ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF746BQO 507680228 ENCODE Processing Pipeline 3cc64e79e16d73a33774a00b85c12b30 https://www.encodeproject.org/files/ENCFF511QYV/@@download/ENCFF511QYV.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF746ZQX bed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF474NTR, ENCFF582CVJ 6724642 ENCODE Processing Pipeline da5f21b88dfa1298eb58934aada77930 https://www.encodeproject.org/files/ENCFF746ZQX/@@download/ENCFF746ZQX.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF912APY bed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF746BQO 6901921 ENCODE Processing Pipeline a2f4e61aea92daf706a577ba5e320c3c https://www.encodeproject.org/files/ENCFF912APY/@@download/ENCFF912APY.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF689MEC bigBed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF912APY 12368649 ENCODE Processing Pipeline c6bc9a7c48df8264207275af41389dbb https://www.encodeproject.org/files/ENCFF689MEC/@@download/ENCFF689MEC.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF220WGP bed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF474NTR, ENCFF582CVJ, ENCFF746BQO 7213766 ENCODE Processing Pipeline 1a054c8b5c367ff2152fb91733c76260 https://www.encodeproject.org/files/ENCFF220WGP/@@download/ENCFF220WGP.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF356PQD bigBed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF746ZQX 12654044 ENCODE Processing Pipeline 3cf2346286a91e07a142e0dba0a9f965 https://www.encodeproject.org/files/ENCFF356PQD/@@download/ENCFF356PQD.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF615LFZ bigWig fold change over control ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF474NTR, ENCFF582CVJ, ENCFF746BQO 926591658 ENCODE Processing Pipeline c07dc01c991a9715f2cd475f667f30d5 https://www.encodeproject.org/files/ENCFF615LFZ/@@download/ENCFF615LFZ.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF929VJO bigBed narrowPeak peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF220WGP 12424089 ENCODE Processing Pipeline 525700f30919ffbf04eb9f0b9b19cff7 https://www.encodeproject.org/files/ENCFF929VJO/@@download/ENCFF929VJO.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF135EPJ bed narrowPeak conservative idr thresholded peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF220WGP, ENCFF419RSJ, ENCFF746ZQX, ENCFF912APY 220666 ENCODE Processing Pipeline a3c36ef8180ee34a32557dd92938b13e https://www.encodeproject.org/files/ENCFF135EPJ/@@download/ENCFF135EPJ.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF507LPB bigBed narrowPeak conservative idr thresholded peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF135EPJ 528741 ENCODE Processing Pipeline 5ffbd2cee5981d1916a422c583cfd9f6 https://www.encodeproject.org/files/ENCFF507LPB/@@download/ENCFF507LPB.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF046ODH bed narrowPeak optimal idr thresholded peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF220WGP, ENCFF419RSJ, ENCFF746ZQX, ENCFF912APY 229623 ENCODE Processing Pipeline 6bd4e82309352b203a88ffef352e0faa https://www.encodeproject.org/files/ENCFF046ODH/@@download/ENCFF046ODH.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF594UAO bigBed narrowPeak optimal idr thresholded peaks ENCSR571PDN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SSRP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF046ODH 546489 ENCODE Processing Pipeline 6bf6f2b84a03c47ba7629fe84d12cf33 https://www.encodeproject.org/files/ENCFF594UAO/@@download/ENCFF594UAO.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF095XXT fastq reads ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1273925055 Richard Myers, HAIB fafe31aef53394aa13790b3e39ba3dd5 SRA:SRR5338963 https://www.encodeproject.org/files/ENCFF095XXT/@@download/ENCFF095XXT.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF272TAW fastq reads ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1600255076 Richard Myers, HAIB 7406d4bffa7685ed0feb0b55735a3003 SRA:SRR5338962 https://www.encodeproject.org/files/ENCFF272TAW/@@download/ENCFF272TAW.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF971DVJ bam unfiltered alignments ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF095XXT, ENCFF643CGH 1378294761 ENCODE Processing Pipeline d39a22f20825a958f2c89df0d8795ec7 https://www.encodeproject.org/files/ENCFF971DVJ/@@download/ENCFF971DVJ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF641NDW bam unfiltered alignments ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF272TAW, ENCFF643CGH 1807155258 ENCODE Processing Pipeline 0e4670bd61f0ba1d1cd417e1f259f21d https://www.encodeproject.org/files/ENCFF641NDW/@@download/ENCFF641NDW.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF685YNH bam unfiltered alignments ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF095XXT, ENCFF807MUK 1374434579 ENCODE Processing Pipeline dd37b97467d1fe7e9338c675ddc80a3c https://www.encodeproject.org/files/ENCFF685YNH/@@download/ENCFF685YNH.bam hg19 released antibody characterized with exemption, low read depth ENCFF530UBB bam unfiltered alignments ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF272TAW, ENCFF807MUK 1801692587 ENCODE Processing Pipeline 5cf8df457ea10841cc1d5ae1552e4165 https://www.encodeproject.org/files/ENCFF530UBB/@@download/ENCFF530UBB.bam hg19 released antibody characterized with exemption, low read depth ENCFF060HQQ bam alignments ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF095XXT, ENCFF643CGH 1025033935 ENCODE Processing Pipeline bf6cd23c39fea99b0bff79620cb4bd9e https://www.encodeproject.org/files/ENCFF060HQQ/@@download/ENCFF060HQQ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF019FLT bam alignments ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF095XXT, ENCFF807MUK 1024240981 ENCODE Processing Pipeline ae62f42f0a36d83fabf2e5289298318c https://www.encodeproject.org/files/ENCFF019FLT/@@download/ENCFF019FLT.bam hg19 released antibody characterized with exemption, low read depth ENCFF104USR bam alignments ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF272TAW, ENCFF807MUK 1371233008 ENCODE Processing Pipeline db4a1586c2def47bf1402358104b1a7c https://www.encodeproject.org/files/ENCFF104USR/@@download/ENCFF104USR.bam hg19 released antibody characterized with exemption, low read depth ENCFF304FMS bam alignments ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF272TAW, ENCFF643CGH 1372373143 ENCODE Processing Pipeline f5430cd6729bf638433f99e7313375ab https://www.encodeproject.org/files/ENCFF304FMS/@@download/ENCFF304FMS.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF268JCN bigWig signal p-value ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF060HQQ 476203720 ENCODE Processing Pipeline 038962cb5492c90abf375dda192523d6 https://www.encodeproject.org/files/ENCFF268JCN/@@download/ENCFF268JCN.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF650NLN bigWig signal p-value ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF304FMS 639744373 ENCODE Processing Pipeline eb1b160621a01e31cd4e152a6a1ab31d https://www.encodeproject.org/files/ENCFF650NLN/@@download/ENCFF650NLN.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF487AVQ bigWig signal p-value ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF060HQQ, ENCFF304FMS 643610107 ENCODE Processing Pipeline c42eefe94969386c2e0c22b840d92bfd https://www.encodeproject.org/files/ENCFF487AVQ/@@download/ENCFF487AVQ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF209WPQ bigWig fold change over control ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF060HQQ 406492718 ENCODE Processing Pipeline 6d178ba672dfbc21d1a882aed22c6799 https://www.encodeproject.org/files/ENCFF209WPQ/@@download/ENCFF209WPQ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF215UXD bigWig fold change over control ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF304FMS 529974513 ENCODE Processing Pipeline 654082ff6c9b68ed17950d1b432d9928 https://www.encodeproject.org/files/ENCFF215UXD/@@download/ENCFF215UXD.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF126BUH bigWig fold change over control ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF060HQQ, ENCFF304FMS 797376033 ENCODE Processing Pipeline c96bd18a0e4c5703bf0dc61df37c62b3 https://www.encodeproject.org/files/ENCFF126BUH/@@download/ENCFF126BUH.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF650MCR bed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF060HQQ 5297075 ENCODE Processing Pipeline e52c5c375b5176720cd30d90f7751723 https://www.encodeproject.org/files/ENCFF650MCR/@@download/ENCFF650MCR.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF782TPS bed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF304FMS 5720672 ENCODE Processing Pipeline b390a798041677be92cc3c8e1ce4275c https://www.encodeproject.org/files/ENCFF782TPS/@@download/ENCFF782TPS.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF890SZN bed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF060HQQ, ENCFF304FMS 6342359 ENCODE Processing Pipeline 48d4bd678d38ac29be6a5226a9463625 https://www.encodeproject.org/files/ENCFF890SZN/@@download/ENCFF890SZN.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF745ZGN bigBed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF650MCR 10995584 ENCODE Processing Pipeline 09322c635a7a29143c5aa891e3505d4c https://www.encodeproject.org/files/ENCFF745ZGN/@@download/ENCFF745ZGN.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF083SKJ bigBed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF782TPS 13290179 ENCODE Processing Pipeline d6e50034440c52ca96acf185ff6c00dd https://www.encodeproject.org/files/ENCFF083SKJ/@@download/ENCFF083SKJ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF623COM bed narrowPeak optimal idr thresholded peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF650MCR, ENCFF782TPS, ENCFF890SZN 408722 ENCODE Processing Pipeline 1cb44a831a1107b2274f554ada4a3871 https://www.encodeproject.org/files/ENCFF623COM/@@download/ENCFF623COM.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF169VVY bigBed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF890SZN 13369846 ENCODE Processing Pipeline f32768c21061c8e0ea29dfa5bd0023a4 https://www.encodeproject.org/files/ENCFF169VVY/@@download/ENCFF169VVY.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF163BAD bigBed narrowPeak optimal idr thresholded peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF623COM 696642 ENCODE Processing Pipeline 394eecaf6b10655cfe88ba057ac41d79 https://www.encodeproject.org/files/ENCFF163BAD/@@download/ENCFF163BAD.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF973PYC bigWig signal p-value ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF104USR, ENCFF203ABR 1323059161 ENCODE Processing Pipeline a9be2e28b9a6aba6adb5ffad97d5f004 https://www.encodeproject.org/files/ENCFF973PYC/@@download/ENCFF973PYC.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF886BLY bigWig signal p-value ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF019FLT, ENCFF203ABR 1151937741 ENCODE Processing Pipeline 504119f6eca14f11fa5c2d37d8ca4e0a https://www.encodeproject.org/files/ENCFF886BLY/@@download/ENCFF886BLY.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF038XGD bigWig signal p-value ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF019FLT, ENCFF104USR, ENCFF203ABR 1465867871 ENCODE Processing Pipeline 81d20596bd79261005dd78187aaba311 https://www.encodeproject.org/files/ENCFF038XGD/@@download/ENCFF038XGD.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF101CTF bigWig fold change over control ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF019FLT, ENCFF203ABR 755070134 ENCODE Processing Pipeline f21aac3117b5ccf0ecd0a6388b46cec6 https://www.encodeproject.org/files/ENCFF101CTF/@@download/ENCFF101CTF.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF242SPY bigWig fold change over control ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF104USR, ENCFF203ABR 935059414 ENCODE Processing Pipeline 80555d65b79a3435c3d5e16ea4146ee1 https://www.encodeproject.org/files/ENCFF242SPY/@@download/ENCFF242SPY.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF649PVC bigWig fold change over control ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF019FLT, ENCFF104USR, ENCFF203ABR 1386816930 ENCODE Processing Pipeline a0f0a3b6ff99f84746e0cb16c578d245 https://www.encodeproject.org/files/ENCFF649PVC/@@download/ENCFF649PVC.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF701KPJ bed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF104USR, ENCFF203ABR 6393381 ENCODE Processing Pipeline d1a2ec724e0581eff34cc052dd5e9700 https://www.encodeproject.org/files/ENCFF701KPJ/@@download/ENCFF701KPJ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF362LIP bed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF019FLT, ENCFF203ABR 6115184 ENCODE Processing Pipeline 3fce1cce4b4989ec0e2c354bbd886e4b https://www.encodeproject.org/files/ENCFF362LIP/@@download/ENCFF362LIP.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF042YBV bigBed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF362LIP 13347063 ENCODE Processing Pipeline 053b17380705245f41f677da6dbb221e https://www.encodeproject.org/files/ENCFF042YBV/@@download/ENCFF042YBV.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF246CXS bed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF019FLT, ENCFF104USR, ENCFF203ABR 6842448 ENCODE Processing Pipeline e5c3455723b930752840234db4464be3 https://www.encodeproject.org/files/ENCFF246CXS/@@download/ENCFF246CXS.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF210KUI bigBed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF246CXS 13355888 ENCODE Processing Pipeline 1fd5aeb27c9f4a93dd767d4a9c4db1f6 https://www.encodeproject.org/files/ENCFF210KUI/@@download/ENCFF210KUI.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF951QQD bigBed narrowPeak peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF701KPJ 13383605 ENCODE Processing Pipeline 8b3fdc1b35d69f08bd2bb2353269fd7f https://www.encodeproject.org/files/ENCFF951QQD/@@download/ENCFF951QQD.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF822WCE bed narrowPeak conservative idr thresholded peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF246CXS, ENCFF362LIP, ENCFF701KPJ 376752 ENCODE Processing Pipeline dff3db890c1d9d461a5ac8977e74dba6 https://www.encodeproject.org/files/ENCFF822WCE/@@download/ENCFF822WCE.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF679PRJ bigBed narrowPeak conservative idr thresholded peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF822WCE 669173 ENCODE Processing Pipeline aa43e915841056d0740d53fed21dfa4b https://www.encodeproject.org/files/ENCFF679PRJ/@@download/ENCFF679PRJ.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF714HWJ bed narrowPeak optimal idr thresholded peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF246CXS, ENCFF362LIP, ENCFF701KPJ 382754 ENCODE Processing Pipeline 68326637a68025a67960362ae8e917af https://www.encodeproject.org/files/ENCFF714HWJ/@@download/ENCFF714HWJ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF771ACE bigBed narrowPeak optimal idr thresholded peaks ENCSR578CXC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF644-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF714HWJ 676829 ENCODE Processing Pipeline 14ed86c8ae00299157ff33eb55bb058b https://www.encodeproject.org/files/ENCFF771ACE/@@download/ENCFF771ACE.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF594DJD fastq reads ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 1 50 single-ended 1346071011 Richard Myers, HAIB 17c2de2416ae7ab641667a457eaee8c5 SRA:SRR5339165 https://www.encodeproject.org/files/ENCFF594DJD/@@download/ENCFF594DJD.fastq.gz HiSeq 2000 /files/ENCFF735GUP/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF059UOO fastq reads ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 1 50 single-ended 1567972896 Richard Myers, HAIB 5910445ab773c53580f2c88bf5ee064d SRA:SRR5339166 https://www.encodeproject.org/files/ENCFF059UOO/@@download/ENCFF059UOO.fastq.gz HiSeq 2000 /files/ENCFF527ZQY/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF614KAI bam alignments ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF594DJD, ENCFF807MUK 1038047267 ENCODE Processing Pipeline 2d49c5e98c92a30891b6e465c5a497b9 https://www.encodeproject.org/files/ENCFF614KAI/@@download/ENCFF614KAI.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF717AFR bam alignments ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF059UOO, ENCFF807MUK 1295114250 ENCODE Processing Pipeline 70947b298f661756bcf7c6ca995b5a6e https://www.encodeproject.org/files/ENCFF717AFR/@@download/ENCFF717AFR.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF108WXX bigWig signal p-value ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF078CCC, ENCFF717AFR, ENCFF847YWA 658142678 ENCODE Processing Pipeline aecb157220ae27129809ec4e9f068540 https://www.encodeproject.org/files/ENCFF108WXX/@@download/ENCFF108WXX.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF166EDF bigWig signal p-value ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF078CCC, ENCFF614KAI, ENCFF717AFR, ENCFF847YWA 751979200 ENCODE Processing Pipeline 24a432efeb25a65e65f4de15cb7a34e4 https://www.encodeproject.org/files/ENCFF166EDF/@@download/ENCFF166EDF.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF804APM bigWig signal p-value ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF614KAI, ENCFF847YWA 419175916 ENCODE Processing Pipeline c90cc85ca4be5fbc11d7a4bfa28d057e https://www.encodeproject.org/files/ENCFF804APM/@@download/ENCFF804APM.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF273NJG bigWig fold change over control ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF078CCC, ENCFF717AFR, ENCFF847YWA 616802593 ENCODE Processing Pipeline 9eede2165ac00c2a1d5aaf45178b5f43 https://www.encodeproject.org/files/ENCFF273NJG/@@download/ENCFF273NJG.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF849XRU bigWig fold change over control ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF614KAI, ENCFF847YWA 398479934 ENCODE Processing Pipeline 84d8e80d328fcd4d0c117c13d931fd7c https://www.encodeproject.org/files/ENCFF849XRU/@@download/ENCFF849XRU.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF199WOT bigWig fold change over control ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF078CCC, ENCFF614KAI, ENCFF717AFR, ENCFF847YWA 885966607 ENCODE Processing Pipeline 6073f9761d577ddb81ff3916dc322951 https://www.encodeproject.org/files/ENCFF199WOT/@@download/ENCFF199WOT.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF374VVK bed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF614KAI, ENCFF847YWA 5887321 ENCODE Processing Pipeline 0574365e7173847c27054ce4d978e898 https://www.encodeproject.org/files/ENCFF374VVK/@@download/ENCFF374VVK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF448WRI bed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF078CCC, ENCFF717AFR, ENCFF847YWA 5886975 ENCODE Processing Pipeline da88e7d71d900b6a270281512bd42a68 https://www.encodeproject.org/files/ENCFF448WRI/@@download/ENCFF448WRI.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF520RNS bigBed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF448WRI 11521727 ENCODE Processing Pipeline f9e7ecc1555c1884e3e164055d8a9834 https://www.encodeproject.org/files/ENCFF520RNS/@@download/ENCFF520RNS.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF466TRI bed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF078CCC, ENCFF614KAI, ENCFF717AFR, ENCFF847YWA 6610427 ENCODE Processing Pipeline f12ebf10b9d9be60e80a0625b46bca45 https://www.encodeproject.org/files/ENCFF466TRI/@@download/ENCFF466TRI.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF444BKL bigBed narrowPeak conservative idr thresholded peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF593SAN 1575302 ENCODE Processing Pipeline d74dd7f377630ea2bccc8836bc245f44 https://www.encodeproject.org/files/ENCFF444BKL/@@download/ENCFF444BKL.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF321FDD bigBed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF466TRI 14001815 ENCODE Processing Pipeline 1fe338a0296593568c841c7afd5776da https://www.encodeproject.org/files/ENCFF321FDD/@@download/ENCFF321FDD.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF792ZHJ bigBed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF374VVK 13409631 ENCODE Processing Pipeline b547e9099ff3d1d2c437b0d9dc7decf2 https://www.encodeproject.org/files/ENCFF792ZHJ/@@download/ENCFF792ZHJ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF593SAN bed narrowPeak conservative idr thresholded peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF374VVK, ENCFF448WRI, ENCFF466TRI 929713 ENCODE Processing Pipeline 30add6c5cd0f68684d714b10a71bee02 https://www.encodeproject.org/files/ENCFF593SAN/@@download/ENCFF593SAN.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF375QZM bigBed narrowPeak optimal idr thresholded peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF846JKX 1619733 ENCODE Processing Pipeline ae6ffed987d80f6fd1de7b4e9593e0e9 https://www.encodeproject.org/files/ENCFF375QZM/@@download/ENCFF375QZM.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF846JKX bed narrowPeak optimal idr thresholded peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF374VVK, ENCFF448WRI, ENCFF466TRI 965790 ENCODE Processing Pipeline 3b292306bf576550c445db298c444e3e https://www.encodeproject.org/files/ENCFF846JKX/@@download/ENCFF846JKX.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF535LOU bam unfiltered alignments ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 50 ENCFF594DJD, ENCFF643CGH 1400607097 ENCODE Processing Pipeline e2e1aab68ef820cf8a966da1f924a928 https://www.encodeproject.org/files/ENCFF535LOU/@@download/ENCFF535LOU.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF969FLL bam unfiltered alignments ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 50 ENCFF059UOO, ENCFF643CGH 1667595242 ENCODE Processing Pipeline f7370672538df0c7732661864152246d https://www.encodeproject.org/files/ENCFF969FLL/@@download/ENCFF969FLL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF955RIY bam alignments ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 50 ENCFF594DJD, ENCFF643CGH 1037504441 ENCODE Processing Pipeline 27efa5bb3f3a19355dd96c523873d81f https://www.encodeproject.org/files/ENCFF955RIY/@@download/ENCFF955RIY.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF337KIG bam alignments ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 50 ENCFF059UOO, ENCFF643CGH 1294723815 ENCODE Processing Pipeline a87ccba8d1b2f0b87d9a3e0455537ed4 https://www.encodeproject.org/files/ENCFF337KIG/@@download/ENCFF337KIG.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF548ACS bigWig signal p-value ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF156BNP, ENCFF291JPZ, ENCFF337KIG 728154726 ENCODE Processing Pipeline 695408db35867dfecec3c635d135e767 https://www.encodeproject.org/files/ENCFF548ACS/@@download/ENCFF548ACS.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF139PGF bigWig signal p-value ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF156BNP, ENCFF955RIY 419798840 ENCODE Processing Pipeline c2b26b520f1d05532ce42e5c5c136fdb https://www.encodeproject.org/files/ENCFF139PGF/@@download/ENCFF139PGF.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF994IUG bigWig signal p-value ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF156BNP, ENCFF291JPZ, ENCFF337KIG, ENCFF955RIY 782627675 ENCODE Processing Pipeline de9a29463a34f46f53ac1753925b4f98 https://www.encodeproject.org/files/ENCFF994IUG/@@download/ENCFF994IUG.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF513QHS bigWig fold change over control ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF156BNP, ENCFF291JPZ, ENCFF337KIG, ENCFF955RIY 911773193 ENCODE Processing Pipeline c92cdd9c19d44f25eb9ffa067ed63685 https://www.encodeproject.org/files/ENCFF513QHS/@@download/ENCFF513QHS.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF112TRV bigBed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF008LIL 13349885 ENCODE Processing Pipeline 6eefbddd791f70a983f312c308a680d1 https://www.encodeproject.org/files/ENCFF112TRV/@@download/ENCFF112TRV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF236YNF bigWig fold change over control ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF156BNP, ENCFF291JPZ, ENCFF337KIG 617638950 ENCODE Processing Pipeline d90062ce33fb451cea7cd2eeef001a8c https://www.encodeproject.org/files/ENCFF236YNF/@@download/ENCFF236YNF.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF008LIL bed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF156BNP, ENCFF955RIY 5756910 ENCODE Processing Pipeline c015b93acf8ee76a39d8ac7abcd3923c https://www.encodeproject.org/files/ENCFF008LIL/@@download/ENCFF008LIL.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF329EKU bigBed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF467MVO 11466715 ENCODE Processing Pipeline b2332e9df801d608a0476960fc76466b https://www.encodeproject.org/files/ENCFF329EKU/@@download/ENCFF329EKU.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF568JRC bigBed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF264FDU 13997286 ENCODE Processing Pipeline 1efc48e4c4f22d6c8973357d4e7a62d1 https://www.encodeproject.org/files/ENCFF568JRC/@@download/ENCFF568JRC.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF081TVG bed narrowPeak optimal idr thresholded peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF008LIL, ENCFF264FDU, ENCFF419RSJ, ENCFF467MVO 931457 ENCODE Processing Pipeline e1fc73741161fed5057c55788a8fe2fe https://www.encodeproject.org/files/ENCFF081TVG/@@download/ENCFF081TVG.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF813NOM bigBed narrowPeak optimal idr thresholded peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF081TVG 1577966 ENCODE Processing Pipeline 61bff085f4118dcce0da20b862e89bef https://www.encodeproject.org/files/ENCFF813NOM/@@download/ENCFF813NOM.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF152BRF bigWig fold change over control ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 2 ENCFF156BNP, ENCFF955RIY 398551974 ENCODE Processing Pipeline 623b3b686359749176e8a17387e3fb2d https://www.encodeproject.org/files/ENCFF152BRF/@@download/ENCFF152BRF.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF264FDU bed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1, 2 ENCFF156BNP, ENCFF291JPZ, ENCFF337KIG, ENCFF955RIY 6489478 ENCODE Processing Pipeline 2e25c37faddaccafefc2c9dfba65f863 https://www.encodeproject.org/files/ENCFF264FDU/@@download/ENCFF264FDU.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF467MVO bed narrowPeak peaks ENCSR703TNG ChIP-seq EFO:0001203 MCF-7 immortalized cell line adult female 69 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-28 ENCODE 1 ENCFF156BNP, ENCFF291JPZ, ENCFF337KIG 5717627 ENCODE Processing Pipeline 16d3c5a32fd4a581263cd6b16026eea6 https://www.encodeproject.org/files/ENCFF467MVO/@@download/ENCFF467MVO.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF556LOK fastq reads ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 1 76 single-ended 1524515699 Richard Myers, HAIB 1fde63d0c539421e2bc0d0f4730d0157 SRA:SRR5331238 https://www.encodeproject.org/files/ENCFF556LOK/@@download/ENCFF556LOK.fastq.gz HiSeq 2000 /files/ENCFF993VKM/ released inconsistent control read length, mixed read lengths, antibody characterized with exemption ENCFF446UUV fastq reads ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 1 50 single-ended 1263056275 Richard Myers, HAIB 45d72be7311c596552bd703b744a3140 SRA:SRR5331239 https://www.encodeproject.org/files/ENCFF446UUV/@@download/ENCFF446UUV.fastq.gz HiSeq 2000 /files/ENCFF774EJH/ released mixed read lengths, antibody characterized with exemption ENCFF047ILC bam unfiltered alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 50 ENCFF446UUV, ENCFF643CGH 1420843039 ENCODE Processing Pipeline bfd9001a73eb04f3ef904ef2f8eccb84 https://www.encodeproject.org/files/ENCFF047ILC/@@download/ENCFF047ILC.bam GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF426GAB bam unfiltered alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 50 ENCFF556LOK, ENCFF643CGH 1306633197 ENCODE Processing Pipeline 2916e32b0c0ebe2e5b1388aaf9887e92 https://www.encodeproject.org/files/ENCFF426GAB/@@download/ENCFF426GAB.bam GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF669FJO bam unfiltered alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 50 ENCFF556LOK, ENCFF807MUK 1303240785 ENCODE Processing Pipeline 17072366f8541997f14db27bf76deb18 https://www.encodeproject.org/files/ENCFF669FJO/@@download/ENCFF669FJO.bam hg19 released mixed read lengths, antibody characterized with exemption ENCFF056HVT bam alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 50 ENCFF446UUV, ENCFF643CGH 1018260336 ENCODE Processing Pipeline f349378b74a410e990d2ed137cb16325 https://www.encodeproject.org/files/ENCFF056HVT/@@download/ENCFF056HVT.bam GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF277XXK bam alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 50 ENCFF556LOK, ENCFF807MUK 985916483 ENCODE Processing Pipeline 17b791e2e9372cd6ceecf06865ef4f11 https://www.encodeproject.org/files/ENCFF277XXK/@@download/ENCFF277XXK.bam hg19 released mixed read lengths, antibody characterized with exemption ENCFF900QPQ bam alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 50 ENCFF556LOK, ENCFF643CGH 985787658 ENCODE Processing Pipeline c7c48fd1843dd396c775acf23d0f6960 https://www.encodeproject.org/files/ENCFF900QPQ/@@download/ENCFF900QPQ.bam GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF463TPW bam unfiltered alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 50 ENCFF446UUV, ENCFF807MUK 1416261240 ENCODE Processing Pipeline d93fb02353c3bc90dbb0ab42cd4e571e https://www.encodeproject.org/files/ENCFF463TPW/@@download/ENCFF463TPW.bam hg19 released mixed read lengths, antibody characterized with exemption ENCFF496KXN bam alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 50 ENCFF446UUV, ENCFF807MUK 1018521249 ENCODE Processing Pipeline 76bd268c0c19886a9c33629981e4bf00 https://www.encodeproject.org/files/ENCFF496KXN/@@download/ENCFF496KXN.bam hg19 released mixed read lengths, antibody characterized with exemption ENCFF470KQI bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF277XXK, ENCFF454QBD, ENCFF847YDJ 759882354 ENCODE Processing Pipeline b7d990f92b094da38d8fe84995b18d92 https://www.encodeproject.org/files/ENCFF470KQI/@@download/ENCFF470KQI.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF405ZFU bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 737454293 ENCODE Processing Pipeline 04b65a7580e08f464e5430bdd880963b https://www.encodeproject.org/files/ENCFF405ZFU/@@download/ENCFF405ZFU.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF133HPH bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF277XXK, ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 872172530 ENCODE Processing Pipeline a7ca548262b47afcd536bfbe5a3bad9d https://www.encodeproject.org/files/ENCFF133HPH/@@download/ENCFF133HPH.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF469DWQ bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF204QNV 13400045 ENCODE Processing Pipeline 3a81acc926d6c3cc335a437bca28cd4a https://www.encodeproject.org/files/ENCFF469DWQ/@@download/ENCFF469DWQ.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF292EOF bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 910543325 ENCODE Processing Pipeline 65510e5613353b952ec26352d90a2999 https://www.encodeproject.org/files/ENCFF292EOF/@@download/ENCFF292EOF.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF711IOY bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF277XXK, ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 1076240608 ENCODE Processing Pipeline 7b01948b649034e53227966afcb16d73 https://www.encodeproject.org/files/ENCFF711IOY/@@download/ENCFF711IOY.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF438LLN bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF277XXK, ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 6963927 ENCODE Processing Pipeline 8da2c2417956aedccde0b15abe913175 https://www.encodeproject.org/files/ENCFF438LLN/@@download/ENCFF438LLN.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF069OII bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF438LLN 13418968 ENCODE Processing Pipeline 538750a07388ff688e12731b94431599 https://www.encodeproject.org/files/ENCFF069OII/@@download/ENCFF069OII.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF988WAF bed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF204QNV, ENCFF438LLN, ENCFF925VOV 587450 ENCODE Processing Pipeline 00e2911c430ac59c84433e36a0a49b18 https://www.encodeproject.org/files/ENCFF988WAF/@@download/ENCFF988WAF.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF217SNL bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF277XXK, ENCFF454QBD, ENCFF847YDJ 692955740 ENCODE Processing Pipeline 03afe5b0bde32dad81f385715451455c https://www.encodeproject.org/files/ENCFF217SNL/@@download/ENCFF217SNL.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF204QNV bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 6492911 ENCODE Processing Pipeline 9de266ebdbe9e0035b2c922738642fcf https://www.encodeproject.org/files/ENCFF204QNV/@@download/ENCFF204QNV.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF925VOV bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF277XXK, ENCFF454QBD, ENCFF847YDJ 6133457 ENCODE Processing Pipeline 225a6eb7aa177f322f26910ce442b90d https://www.encodeproject.org/files/ENCFF925VOV/@@download/ENCFF925VOV.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF946VWH bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF925VOV 13387072 ENCODE Processing Pipeline 6c51928a3171a38c17d0874769086d6a https://www.encodeproject.org/files/ENCFF946VWH/@@download/ENCFF946VWH.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF765ZOV bigBed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF511QHY 1251780 ENCODE Processing Pipeline f1af358b4115ce184bf058deccd55097 https://www.encodeproject.org/files/ENCFF765ZOV/@@download/ENCFF765ZOV.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF491JPM bigBed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF988WAF 1132399 ENCODE Processing Pipeline efb9488e1e33ed626e579bfcd66b4665 https://www.encodeproject.org/files/ENCFF491JPM/@@download/ENCFF491JPM.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF511QHY bed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF204QNV, ENCFF438LLN, ENCFF925VOV 668402 ENCODE Processing Pipeline 2a540d117bdccfec94aa0f5dc33dc677 https://www.encodeproject.org/files/ENCFF511QHY/@@download/ENCFF511QHY.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF126FSU bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 799821343 ENCODE Processing Pipeline 96ffff71d79dcf5c6be2de38d37a5525 https://www.encodeproject.org/files/ENCFF126FSU/@@download/ENCFF126FSU.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF786NPW bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ 838730578 ENCODE Processing Pipeline ff18544cc704d6d1ba24316dee52c3f5 https://www.encodeproject.org/files/ENCFF786NPW/@@download/ENCFF786NPW.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF078IDT bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 1146039451 ENCODE Processing Pipeline b15bcff2d599337e86f1262b9140e767 https://www.encodeproject.org/files/ENCFF078IDT/@@download/ENCFF078IDT.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF534OWD bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ 732677538 ENCODE Processing Pipeline e8c9628e47f4df5c49257722023298fc https://www.encodeproject.org/files/ENCFF534OWD/@@download/ENCFF534OWD.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF383COK bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 706973741 ENCODE Processing Pipeline f9cdde531a2b6016bc27a7bae810f8b3 https://www.encodeproject.org/files/ENCFF383COK/@@download/ENCFF383COK.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF152NWJ bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 1083564980 ENCODE Processing Pipeline e204ff8f79d26718917b9721fca24d97 https://www.encodeproject.org/files/ENCFF152NWJ/@@download/ENCFF152NWJ.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF854LEH bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ 6339723 ENCODE Processing Pipeline 88121965170dc85fbd7057b07039001c https://www.encodeproject.org/files/ENCFF854LEH/@@download/ENCFF854LEH.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF974TEI bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 5990521 ENCODE Processing Pipeline 5f9413804d50a7ae7c224968c18f34c8 https://www.encodeproject.org/files/ENCFF974TEI/@@download/ENCFF974TEI.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF211PSS bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 6866642 ENCODE Processing Pipeline 0bbab442c1d8d0f96f2e28a07215d854 https://www.encodeproject.org/files/ENCFF211PSS/@@download/ENCFF211PSS.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF070HSU bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF854LEH 13392212 ENCODE Processing Pipeline af7103e625e692de2fb655b10c461fa9 https://www.encodeproject.org/files/ENCFF070HSU/@@download/ENCFF070HSU.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF855BFC bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF974TEI 13371222 ENCODE Processing Pipeline d94aa98f7792c966ad79b104cfbb6893 https://www.encodeproject.org/files/ENCFF855BFC/@@download/ENCFF855BFC.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF893VZW bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF211PSS 13416916 ENCODE Processing Pipeline 9a674e4ad2082d4d5a6beef36b6d5567 https://www.encodeproject.org/files/ENCFF893VZW/@@download/ENCFF893VZW.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF429TTF bed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF211PSS, ENCFF419RSJ, ENCFF854LEH, ENCFF974TEI 585763 ENCODE Processing Pipeline 0f170d7b83a83f5e6232e5f2c409832d https://www.encodeproject.org/files/ENCFF429TTF/@@download/ENCFF429TTF.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF278VAF bigBed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF195IFB 1256919 ENCODE Processing Pipeline 033481be898c6c9c108bf515ef7d302e https://www.encodeproject.org/files/ENCFF278VAF/@@download/ENCFF278VAF.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF909FDP bigBed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF429TTF 1130225 ENCODE Processing Pipeline 567c2d7ff631bc0dc65e8465c0a32de7 https://www.encodeproject.org/files/ENCFF909FDP/@@download/ENCFF909FDP.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF195IFB bed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF211PSS, ENCFF419RSJ, ENCFF854LEH, ENCFF974TEI 670081 ENCODE Processing Pipeline baaa2bdfb02d2094530f3826d8684ed1 https://www.encodeproject.org/files/ENCFF195IFB/@@download/ENCFF195IFB.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF779OCL fastq reads ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 1 50 single-ended 1396929526 Richard Myers, HAIB 67581192b6f26e4269841df74d81073c SRA:SRR5339534 https://www.encodeproject.org/files/ENCFF779OCL/@@download/ENCFF779OCL.fastq.gz HiSeq 2000 /files/ENCFF272WBE/ released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF070RQL fastq reads ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 1 50 single-ended 2280171920 Richard Myers, HAIB 28479e1b6560ba5e4e411daa156695d3 SRA:SRR5339535 https://www.encodeproject.org/files/ENCFF070RQL/@@download/ENCFF070RQL.fastq.gz HiSeq 2000 /files/ENCFF737ELZ/ released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF289GAC bam alignments ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF070RQL, ENCFF807MUK 1820113927 ENCODE Processing Pipeline eaa6edbcfb9dde7124fcd3364d518b32 https://www.encodeproject.org/files/ENCFF289GAC/@@download/ENCFF289GAC.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF322CDL bam alignments ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF779OCL, ENCFF807MUK 1076113461 ENCODE Processing Pipeline f9e88d39a5e19a5f884be992f59a0264 https://www.encodeproject.org/files/ENCFF322CDL/@@download/ENCFF322CDL.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF727LMF bigWig signal p-value ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF108FPL, ENCFF322CDL, ENCFF969DYI 787774106 ENCODE Processing Pipeline fb00b3c8e360a953537c490d966444ef https://www.encodeproject.org/files/ENCFF727LMF/@@download/ENCFF727LMF.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF047XRR bigWig signal p-value ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF108FPL, ENCFF289GAC, ENCFF969DYI 1143734289 ENCODE Processing Pipeline fe408ac8489ee7d24752b3007ab06fb8 https://www.encodeproject.org/files/ENCFF047XRR/@@download/ENCFF047XRR.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF360LRR bigWig fold change over control ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF108FPL, ENCFF322CDL, ENCFF969DYI 742703166 ENCODE Processing Pipeline 27fa76021ee3da086dc56cc5c90098d1 https://www.encodeproject.org/files/ENCFF360LRR/@@download/ENCFF360LRR.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF840QDK bigWig signal p-value ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF108FPL, ENCFF289GAC, ENCFF322CDL, ENCFF969DYI 1329541090 ENCODE Processing Pipeline fa1b117172e291922bcf13d95f04fcdc https://www.encodeproject.org/files/ENCFF840QDK/@@download/ENCFF840QDK.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF748IWJ bigWig fold change over control ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF108FPL, ENCFF289GAC, ENCFF322CDL, ENCFF969DYI 1353712446 ENCODE Processing Pipeline d4c4be67aaf77e5cbe7e8d1174576f29 https://www.encodeproject.org/files/ENCFF748IWJ/@@download/ENCFF748IWJ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF046FFQ bigWig fold change over control ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF108FPL, ENCFF289GAC, ENCFF969DYI 1073346067 ENCODE Processing Pipeline 2f2c68b4a34d404797c0ef32dce93a24 https://www.encodeproject.org/files/ENCFF046FFQ/@@download/ENCFF046FFQ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF006WAA bigBed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF467KJE 13350175 ENCODE Processing Pipeline 24310cd6312f7dd1d557ba187c402079 https://www.encodeproject.org/files/ENCFF006WAA/@@download/ENCFF006WAA.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF029FHZ bed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF108FPL, ENCFF322CDL, ENCFF969DYI 6550732 ENCODE Processing Pipeline 5eb05c692477dab690944ae9c11ba30e https://www.encodeproject.org/files/ENCFF029FHZ/@@download/ENCFF029FHZ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF640XEN bigBed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF997CFJ 13397201 ENCODE Processing Pipeline e290dce2942a79d24a8cfd4f61a3e207 https://www.encodeproject.org/files/ENCFF640XEN/@@download/ENCFF640XEN.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF642SED bigBed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF029FHZ 13280687 ENCODE Processing Pipeline bae67584a0af6e6e6db4b5c849fedb80 https://www.encodeproject.org/files/ENCFF642SED/@@download/ENCFF642SED.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF467KJE bed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF108FPL, ENCFF289GAC, ENCFF322CDL, ENCFF969DYI 7184792 ENCODE Processing Pipeline a9cd10b3dd1e599288116d4e6a43337f https://www.encodeproject.org/files/ENCFF467KJE/@@download/ENCFF467KJE.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF569NVH bed narrowPeak conservative idr thresholded peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF029FHZ, ENCFF467KJE, ENCFF997CFJ 456812 ENCODE Processing Pipeline 2e78c2c9365e3cf4b388423b75eb09bd https://www.encodeproject.org/files/ENCFF569NVH/@@download/ENCFF569NVH.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF997CFJ bed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF108FPL, ENCFF289GAC, ENCFF969DYI 6903752 ENCODE Processing Pipeline 67fb6eeedc4b1740e5e61448727e6b0a https://www.encodeproject.org/files/ENCFF997CFJ/@@download/ENCFF997CFJ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF305VNV bigBed narrowPeak conservative idr thresholded peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF569NVH 912338 ENCODE Processing Pipeline d9ac5ada9ca2b8a1860889874b731354 https://www.encodeproject.org/files/ENCFF305VNV/@@download/ENCFF305VNV.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF693JHE bed narrowPeak optimal idr thresholded peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF029FHZ, ENCFF467KJE, ENCFF997CFJ 519466 ENCODE Processing Pipeline d6588d01138beb53cf9323ee986d3fd8 https://www.encodeproject.org/files/ENCFF693JHE/@@download/ENCFF693JHE.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF315IBC bigBed narrowPeak optimal idr thresholded peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF693JHE 1006002 ENCODE Processing Pipeline b55b2b5fdbfc7b7f9cbe856a3fa916b2 https://www.encodeproject.org/files/ENCFF315IBC/@@download/ENCFF315IBC.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF617HTX bam unfiltered alignments ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 50 ENCFF643CGH, ENCFF779OCL 1511073008 ENCODE Processing Pipeline 25b9c4aa299f9bb6c75e7676c2317c69 https://www.encodeproject.org/files/ENCFF617HTX/@@download/ENCFF617HTX.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF578WRZ bam unfiltered alignments ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 50 ENCFF070RQL, ENCFF643CGH 2492115450 ENCODE Processing Pipeline 471a420627b33cdc1599e6af7d90dca8 https://www.encodeproject.org/files/ENCFF578WRZ/@@download/ENCFF578WRZ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF828CLY bam alignments ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 50 ENCFF643CGH, ENCFF779OCL 1075842115 ENCODE Processing Pipeline 0af039656b846dbe1def5918648cb422 https://www.encodeproject.org/files/ENCFF828CLY/@@download/ENCFF828CLY.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF731XGM bam alignments ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 50 ENCFF070RQL, ENCFF643CGH 1820272717 ENCODE Processing Pipeline bebd0f9a2c6fb316cab291f32f27e43b https://www.encodeproject.org/files/ENCFF731XGM/@@download/ENCFF731XGM.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF586EFV bigWig signal p-value ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF372RRO, ENCFF626VZO, ENCFF828CLY 758534304 ENCODE Processing Pipeline fa9bdd0ba2f579f0a370356655d0be10 https://www.encodeproject.org/files/ENCFF586EFV/@@download/ENCFF586EFV.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF103VKF bigWig fold change over control ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF372RRO, ENCFF626VZO, ENCFF828CLY 742379297 ENCODE Processing Pipeline c6c433eee96e19bbbf813a217915efbc https://www.encodeproject.org/files/ENCFF103VKF/@@download/ENCFF103VKF.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF125ANK bigWig signal p-value ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF372RRO, ENCFF626VZO, ENCFF731XGM 970639701 ENCODE Processing Pipeline f3e0ba1854316dd7429937bfb808be6b https://www.encodeproject.org/files/ENCFF125ANK/@@download/ENCFF125ANK.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF873DTT bigWig signal p-value ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF372RRO, ENCFF626VZO, ENCFF731XGM, ENCFF828CLY 1351889150 ENCODE Processing Pipeline 45868b7ab61cd9c3959b1f9fb6876029 https://www.encodeproject.org/files/ENCFF873DTT/@@download/ENCFF873DTT.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF640SYI bigWig fold change over control ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF372RRO, ENCFF626VZO, ENCFF731XGM 1079696921 ENCODE Processing Pipeline 7cb5dc8f53655729a1c8c655d7752fc0 https://www.encodeproject.org/files/ENCFF640SYI/@@download/ENCFF640SYI.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF906AXR bigWig fold change over control ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF372RRO, ENCFF626VZO, ENCFF731XGM, ENCFF828CLY 1377223195 ENCODE Processing Pipeline 066c1f2865463be4289fe00c623e4118 https://www.encodeproject.org/files/ENCFF906AXR/@@download/ENCFF906AXR.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF856HFW bed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF372RRO, ENCFF626VZO, ENCFF731XGM 6764420 ENCODE Processing Pipeline dc06b8a2004597c8f89e7686ecb5dffb https://www.encodeproject.org/files/ENCFF856HFW/@@download/ENCFF856HFW.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF462MIM bed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF372RRO, ENCFF626VZO, ENCFF731XGM, ENCFF828CLY 7110231 ENCODE Processing Pipeline bc66789c59f7078ec5a2e432dbb4832d https://www.encodeproject.org/files/ENCFF462MIM/@@download/ENCFF462MIM.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF050QJU bigBed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 2 ENCFF856HFW 13405752 ENCODE Processing Pipeline be6569fd7105b253f4c5f1bfde25f57c https://www.encodeproject.org/files/ENCFF050QJU/@@download/ENCFF050QJU.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF698CPN bigBed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF462MIM 13350877 ENCODE Processing Pipeline 584e37e5e9a9a9d01f72d34ebbde0e1a https://www.encodeproject.org/files/ENCFF698CPN/@@download/ENCFF698CPN.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF045YGD bed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF372RRO, ENCFF626VZO, ENCFF828CLY 6335624 ENCODE Processing Pipeline f82d45054ea6c702e4b8714617b88c42 https://www.encodeproject.org/files/ENCFF045YGD/@@download/ENCFF045YGD.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF199EDN bigBed narrowPeak peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1 ENCFF045YGD 13278421 ENCODE Processing Pipeline 8b758fdb383fada93b459da52f96b5cd https://www.encodeproject.org/files/ENCFF199EDN/@@download/ENCFF199EDN.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF916WZZ bed narrowPeak conservative idr thresholded peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF045YGD, ENCFF419RSJ, ENCFF462MIM, ENCFF856HFW 455826 ENCODE Processing Pipeline e63d511b662bc4e5aac5ce0799e79296 https://www.encodeproject.org/files/ENCFF916WZZ/@@download/ENCFF916WZZ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF384JEZ bigBed narrowPeak conservative idr thresholded peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF916WZZ 913059 ENCODE Processing Pipeline efa6764cc44498cf7c57c1149e1b9beb https://www.encodeproject.org/files/ENCFF384JEZ/@@download/ENCFF384JEZ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF290UGF bed narrowPeak optimal idr thresholded peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF045YGD, ENCFF419RSJ, ENCFF462MIM, ENCFF856HFW 521548 ENCODE Processing Pipeline 78b6b7231fcf761d614cc774047858ce https://www.encodeproject.org/files/ENCFF290UGF/@@download/ENCFF290UGF.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF745MPC bigBed narrowPeak optimal idr thresholded peaks ENCSR903ELW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens CREM-human ENCAB000AAT DNA False 2016-08-24 ENCODE 1, 2 ENCFF290UGF 1011263 ENCODE Processing Pipeline 4ffb72d30e0cb790f6a7a68b38ae4abc https://www.encodeproject.org/files/ENCFF745MPC/@@download/ENCFF745MPC.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF656FMR fastq reads ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF257PAW 2862064642 Richard Myers, HAIB f4a5b9e7feccf128477ebc4498473bf5 SRA:SRR6214164 https://www.encodeproject.org/files/ENCFF656FMR/@@download/ENCFF656FMR.fastq.gz HiSeq 2000 /files/ENCFF241WBG/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF257PAW fastq reads ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF656FMR 2738559160 Richard Myers, HAIB b60e8ed794fd3500e96cead8cecb4344 SRA:SRR6214164 https://www.encodeproject.org/files/ENCFF257PAW/@@download/ENCFF257PAW.fastq.gz HiSeq 2000 /files/ENCFF654AVJ/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF763ROO bam unfiltered alignments ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF257PAW, ENCFF656FMR, ENCFF807MUK 4289113940 ENCODE Processing Pipeline 03cd63b03aba46cd000f057e830b837e https://www.encodeproject.org/files/ENCFF763ROO/@@download/ENCFF763ROO.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF604MCE bam alignments ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF257PAW, ENCFF656FMR, ENCFF807MUK 2778678037 ENCODE Processing Pipeline 9336207d91bca099db1d1b25cde0bfb5 https://www.encodeproject.org/files/ENCFF604MCE/@@download/ENCFF604MCE.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF377WOB bam unfiltered alignments ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF257PAW, ENCFF643CGH, ENCFF656FMR 4275571478 ENCODE Processing Pipeline b5e1444bd16666ce2f4fd49c7be17155 https://www.encodeproject.org/files/ENCFF377WOB/@@download/ENCFF377WOB.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF085VAF bam alignments ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF257PAW, ENCFF643CGH, ENCFF656FMR 2783294050 ENCODE Processing Pipeline 8520ead2534e53e0c3804719d20c0922 https://www.encodeproject.org/files/ENCFF085VAF/@@download/ENCFF085VAF.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF599UMH bigWig signal p-value ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF085VAF 1253879450 ENCODE Processing Pipeline 8af9e82a725a8ad6ff9a6903a5ad0015 https://www.encodeproject.org/files/ENCFF599UMH/@@download/ENCFF599UMH.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF259DCN bed narrowPeak peaks ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF085VAF 5609719 ENCODE Processing Pipeline b8920afb46fa1d9f25c0dd9cba88c850 https://www.encodeproject.org/files/ENCFF259DCN/@@download/ENCFF259DCN.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF864DXD bigBed narrowPeak peaks ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF259DCN 11109160 ENCODE Processing Pipeline ef1d515ef8998477919081b8d3c55434 https://www.encodeproject.org/files/ENCFF864DXD/@@download/ENCFF864DXD.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF609BNY bigWig fold change over control ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF085VAF 1007548783 ENCODE Processing Pipeline ddf6d4a47e6c6a19aab0f01978307b93 https://www.encodeproject.org/files/ENCFF609BNY/@@download/ENCFF609BNY.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF116VEG bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF259DCN, ENCFF419RSJ 2577 ENCODE Processing Pipeline b7463e5813ec21d7e86e6be584463f52 https://www.encodeproject.org/files/ENCFF116VEG/@@download/ENCFF116VEG.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF329SEA bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF116VEG 48043 ENCODE Processing Pipeline 373132df730dee06025dc95507a88e6e https://www.encodeproject.org/files/ENCFF329SEA/@@download/ENCFF329SEA.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF369SDR bigWig signal p-value ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF604MCE 1247632843 ENCODE Processing Pipeline 74c5ca6f4b6d4408b86f11f528d696ff https://www.encodeproject.org/files/ENCFF369SDR/@@download/ENCFF369SDR.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF938QKL bed narrowPeak peaks ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF604MCE 5547910 ENCODE Processing Pipeline 7da9e1454ba834410306993ded988194 https://www.encodeproject.org/files/ENCFF938QKL/@@download/ENCFF938QKL.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF362SRJ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF938QKL 2880 ENCODE Processing Pipeline ad9128613d28b9160095e84274513c5c https://www.encodeproject.org/files/ENCFF362SRJ/@@download/ENCFF362SRJ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF073BJN bigBed narrowPeak peaks ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF938QKL 10954718 ENCODE Processing Pipeline 22cf49acd539960b2c3945d8c4bc6ba7 https://www.encodeproject.org/files/ENCFF073BJN/@@download/ENCFF073BJN.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF381VXQ bigWig fold change over control ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF604MCE 1002079208 ENCODE Processing Pipeline 542f962385a65f4ac807890f36143a4c https://www.encodeproject.org/files/ENCFF381VXQ/@@download/ENCFF381VXQ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF692BIM bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR975QNR ChIP-seq UBERON:0000996 vagina tissue adult female 51 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF362SRJ 47828 ENCODE Processing Pipeline 1642c11c328f65765f8094d6c7f339a7 https://www.encodeproject.org/files/ENCFF692BIM/@@download/ENCFF692BIM.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF088CRF fastq reads ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 1 50 single-ended 1225224553 Richard Myers, HAIB 3cfdb3f38b9485d1795c454b459f0967 SRA:SRR5338579 https://www.encodeproject.org/files/ENCFF088CRF/@@download/ENCFF088CRF.fastq.gz HiSeq 2000 /files/ENCFF774EJH/ released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF052ZGR fastq reads ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 1 50 single-ended 1735622346 Richard Myers, HAIB d14581d4931c72a884e69a61d4c31682 SRA:SRR5338578 https://www.encodeproject.org/files/ENCFF052ZGR/@@download/ENCFF052ZGR.fastq.gz HiSeq 2000 /files/ENCFF400XMH/ released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF953SAQ bam alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 50 ENCFF088CRF, ENCFF807MUK 780951289 ENCODE Processing Pipeline ee706d0402732860923e0e4c17ca8622 https://www.encodeproject.org/files/ENCFF953SAQ/@@download/ENCFF953SAQ.bam hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF144CPG bam alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 50 ENCFF052ZGR, ENCFF807MUK 1259652794 ENCODE Processing Pipeline 1772459f11ec738d641217228bd94ae5 https://www.encodeproject.org/files/ENCFF144CPG/@@download/ENCFF144CPG.bam hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF130NRI bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD 782751309 ENCODE Processing Pipeline 667e4bbb4c31b93bf3a54fa5936f94ba https://www.encodeproject.org/files/ENCFF130NRI/@@download/ENCFF130NRI.bigWig hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF864WXX bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 837113966 ENCODE Processing Pipeline ecd383b9fe72626d96b32e9c2e653445 https://www.encodeproject.org/files/ENCFF864WXX/@@download/ENCFF864WXX.bigWig hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF372AWS bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD 912715326 ENCODE Processing Pipeline 21ffa6f16d0ff2ea3e2faa009b83e1fb https://www.encodeproject.org/files/ENCFF372AWS/@@download/ENCFF372AWS.bigWig hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF661YGP bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 1002410894 ENCODE Processing Pipeline f8c5b6224a84a36a50d8b36dc13ffba1 https://www.encodeproject.org/files/ENCFF661YGP/@@download/ENCFF661YGP.bigWig hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF494DUB bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 566758252 ENCODE Processing Pipeline e7e889ee478a90db6056205033969a3a https://www.encodeproject.org/files/ENCFF494DUB/@@download/ENCFF494DUB.bigWig hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF693GNL bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 1064968594 ENCODE Processing Pipeline 1a124f3d5506c807506cfec0b1386366 https://www.encodeproject.org/files/ENCFF693GNL/@@download/ENCFF693GNL.bigWig hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF416FBH bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD 6354589 ENCODE Processing Pipeline 9838d379404171f2fb9406628afb8ef6 https://www.encodeproject.org/files/ENCFF416FBH/@@download/ENCFF416FBH.bed.gz hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF929FJI bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 5900193 ENCODE Processing Pipeline cfbcf03baa291b99beb93586aa3f37cd https://www.encodeproject.org/files/ENCFF929FJI/@@download/ENCFF929FJI.bed.gz hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF429ZJG bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 6721454 ENCODE Processing Pipeline f11c47d20371228932e49a1b4b9c3ef5 https://www.encodeproject.org/files/ENCFF429ZJG/@@download/ENCFF429ZJG.bed.gz hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF884WZN bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF416FBH 13481760 ENCODE Processing Pipeline 5f81cb337c028880aeb21227991211d3 https://www.encodeproject.org/files/ENCFF884WZN/@@download/ENCFF884WZN.bigBed hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF570OCZ bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF929FJI 13449373 ENCODE Processing Pipeline b54ae98bfa5bfbd4e1b4e55cffdc9c78 https://www.encodeproject.org/files/ENCFF570OCZ/@@download/ENCFF570OCZ.bigBed hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF142ROP bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF429ZJG 13424525 ENCODE Processing Pipeline 568838d52e010f3c5ec37bdadd8457e0 https://www.encodeproject.org/files/ENCFF142ROP/@@download/ENCFF142ROP.bigBed hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF719KST bed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF416FBH, ENCFF429ZJG, ENCFF929FJI 111600 ENCODE Processing Pipeline 95a7f52d4d77b88ebefe468566d3a599 https://www.encodeproject.org/files/ENCFF719KST/@@download/ENCFF719KST.bed.gz hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF944TTQ bigBed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF719KST 284858 ENCODE Processing Pipeline aa7a99bc759319292ae1f3b15361374b https://www.encodeproject.org/files/ENCFF944TTQ/@@download/ENCFF944TTQ.bigBed hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF434QZL bed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF416FBH, ENCFF429ZJG, ENCFF929FJI 128593 ENCODE Processing Pipeline 4f90e8cc9263cacf63e92bbbf564133f https://www.encodeproject.org/files/ENCFF434QZL/@@download/ENCFF434QZL.bed.gz hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF594PIQ bigBed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF434QZL 310929 ENCODE Processing Pipeline 43b39396a59a85b393d663e234e6293d https://www.encodeproject.org/files/ENCFF594PIQ/@@download/ENCFF594PIQ.bigBed hg19 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF465CQV bam unfiltered alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 50 ENCFF088CRF, ENCFF643CGH 1227881778 ENCODE Processing Pipeline e2bf4218c3645c929986c8aad935cb1e https://www.encodeproject.org/files/ENCFF465CQV/@@download/ENCFF465CQV.bam GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF818RKE bam unfiltered alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 50 ENCFF052ZGR, ENCFF643CGH 1809479121 ENCODE Processing Pipeline ecb3900b172e779d5c5526126635fde8 https://www.encodeproject.org/files/ENCFF818RKE/@@download/ENCFF818RKE.bam GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF290MEZ bam alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 50 ENCFF088CRF, ENCFF643CGH 780462628 ENCODE Processing Pipeline 03c6e84f5dde18a33ac814c70c0f8494 https://www.encodeproject.org/files/ENCFF290MEZ/@@download/ENCFF290MEZ.bam GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF544ZPF bam alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 50 ENCFF052ZGR, ENCFF643CGH 1258971772 ENCODE Processing Pipeline add3eee9dea099401f10347bdb3be49a https://www.encodeproject.org/files/ENCFF544ZPF/@@download/ENCFF544ZPF.bam GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF573KIX bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF544ZPF 872193364 ENCODE Processing Pipeline 4b0d6760dc86e1a5a080eab6d31d19ef https://www.encodeproject.org/files/ENCFF573KIX/@@download/ENCFF573KIX.bigWig GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF683QDN bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ 805130479 ENCODE Processing Pipeline 13be03f01b95fbb6cca4f967a7389cce https://www.encodeproject.org/files/ENCFF683QDN/@@download/ENCFF683QDN.bigWig GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF196XYY bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF544ZPF 782642129 ENCODE Processing Pipeline bb759b45af0348019dfba5f1aa0b0f1a https://www.encodeproject.org/files/ENCFF196XYY/@@download/ENCFF196XYY.bigWig GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF337BHU bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ, ENCFF544ZPF 1107179136 ENCODE Processing Pipeline 39fdb76eea3ba4fe4b6148b0cb3c8b36 https://www.encodeproject.org/files/ENCFF337BHU/@@download/ENCFF337BHU.bigWig GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF911OFZ bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ 574732836 ENCODE Processing Pipeline baa019407ce1d734995a865f44938997 https://www.encodeproject.org/files/ENCFF911OFZ/@@download/ENCFF911OFZ.bigWig GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF777KJU bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ, ENCFF544ZPF 1050274137 ENCODE Processing Pipeline d42a4ef1b036896e2842a588a79a9bdf https://www.encodeproject.org/files/ENCFF777KJU/@@download/ENCFF777KJU.bigWig GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF486YBJ bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ 5728178 ENCODE Processing Pipeline 0e7310b6996bb7f29f30cb9eddcaccf0 https://www.encodeproject.org/files/ENCFF486YBJ/@@download/ENCFF486YBJ.bed.gz GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF737CGV bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ, ENCFF544ZPF 6557854 ENCODE Processing Pipeline 43cd66592b1c67a3296893c809fe7113 https://www.encodeproject.org/files/ENCFF737CGV/@@download/ENCFF737CGV.bed.gz GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF540MKX bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF486YBJ 13427229 ENCODE Processing Pipeline e5c1df5b6265a4294258748b15f649e9 https://www.encodeproject.org/files/ENCFF540MKX/@@download/ENCFF540MKX.bigBed GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF012GDK bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF737CGV 13426524 ENCODE Processing Pipeline 31ea60bc94521a27e90ab732f197c409 https://www.encodeproject.org/files/ENCFF012GDK/@@download/ENCFF012GDK.bigBed GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF983RQW bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF544ZPF 6138545 ENCODE Processing Pipeline 201862c3d0457ae2cb4193b5c8341565 https://www.encodeproject.org/files/ENCFF983RQW/@@download/ENCFF983RQW.bed.gz GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF710VXX bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF983RQW 13467520 ENCODE Processing Pipeline dda13f464a141de4798f0d4975e5438d https://www.encodeproject.org/files/ENCFF710VXX/@@download/ENCFF710VXX.bigBed GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF352LFK bigBed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF059AZP 286889 ENCODE Processing Pipeline e8f2bbbfd4ac7d52dc228f15cc25c7b4 https://www.encodeproject.org/files/ENCFF352LFK/@@download/ENCFF352LFK.bigBed GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF013PKN bigBed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF913HCQ 317835 ENCODE Processing Pipeline 57f4068b469877cd352a95c1121d7454 https://www.encodeproject.org/files/ENCFF013PKN/@@download/ENCFF013PKN.bigBed GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF059AZP bed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF486YBJ, ENCFF737CGV, ENCFF983RQW 112313 ENCODE Processing Pipeline 5b315df459532cd4d767e2dc11387fb2 https://www.encodeproject.org/files/ENCFF059AZP/@@download/ENCFF059AZP.bed.gz GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF913HCQ bed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF486YBJ, ENCFF737CGV, ENCFF983RQW 132646 ENCODE Processing Pipeline b70784948dfa6357fa0dc16a2d1d4dc2 https://www.encodeproject.org/files/ENCFF913HCQ/@@download/ENCFF913HCQ.bed.gz GRCh38 released moderate library complexity, antibody characterized with exemption, low read depth, mild to moderate bottlenecking missing unfiltered alignments ENCFF962ZIJ fastq reads ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1826860821 Richard Myers, HAIB bc5520af7e8f716dbc0e4407cb6fd9dd SRA:SRR5331280 https://www.encodeproject.org/files/ENCFF962ZIJ/@@download/ENCFF962ZIJ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF919DQH fastq reads ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2120849159 Richard Myers, HAIB 971189d49c74cdf3e62df683df11fabe SRA:SRR5331279 https://www.encodeproject.org/files/ENCFF919DQH/@@download/ENCFF919DQH.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF372GAL bam unfiltered alignments ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF962ZIJ 2126533781 ENCODE Processing Pipeline 0a9319eab7531a8b9b7b8b77f594efae https://www.encodeproject.org/files/ENCFF372GAL/@@download/ENCFF372GAL.bam GRCh38 released antibody characterized with exemption ENCFF517HYD bam unfiltered alignments ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF962ZIJ 2121449131 ENCODE Processing Pipeline f5b668578c638e8d38098d2bfd367ada https://www.encodeproject.org/files/ENCFF517HYD/@@download/ENCFF517HYD.bam hg19 released antibody characterized with exemption ENCFF973CTS bam unfiltered alignments ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF919DQH 2446866382 ENCODE Processing Pipeline 35396dc982282cca11173fa136db8310 https://www.encodeproject.org/files/ENCFF973CTS/@@download/ENCFF973CTS.bam GRCh38 released antibody characterized with exemption ENCFF068QMM bam unfiltered alignments ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF919DQH 2441385187 ENCODE Processing Pipeline ec16e02ce72ee174aca1dd5cf83d0473 https://www.encodeproject.org/files/ENCFF068QMM/@@download/ENCFF068QMM.bam hg19 released antibody characterized with exemption ENCFF294QEI bam alignments ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF962ZIJ 1662108240 ENCODE Processing Pipeline d5b501719a61ccb2372efb70fa252286 https://www.encodeproject.org/files/ENCFF294QEI/@@download/ENCFF294QEI.bam GRCh38 released antibody characterized with exemption ENCFF176VLC bam alignments ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF962ZIJ 1661033766 ENCODE Processing Pipeline 67bdc2f43669d69915f7f94e9cbd0833 https://www.encodeproject.org/files/ENCFF176VLC/@@download/ENCFF176VLC.bam hg19 released antibody characterized with exemption ENCFF446MDK bam alignments ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF919DQH 1837755848 ENCODE Processing Pipeline d2b4eed1f9ce8120089fc20590050114 https://www.encodeproject.org/files/ENCFF446MDK/@@download/ENCFF446MDK.bam GRCh38 released antibody characterized with exemption ENCFF020TIU bam alignments ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF919DQH 1836522205 ENCODE Processing Pipeline 3e9fba1ce65b9c50ebe1afede11f4e6e https://www.encodeproject.org/files/ENCFF020TIU/@@download/ENCFF020TIU.bam hg19 released antibody characterized with exemption ENCFF044RBC bigWig signal p-value ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF446MDK 657704103 ENCODE Processing Pipeline 3e47e092d6ae9a16b31d2053c4ae1c20 https://www.encodeproject.org/files/ENCFF044RBC/@@download/ENCFF044RBC.bigWig GRCh38 released antibody characterized with exemption ENCFF270HQG bigWig signal p-value ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF294QEI 616247973 ENCODE Processing Pipeline b5bb5c1ef4e4629e6fa36e723a23a344 https://www.encodeproject.org/files/ENCFF270HQG/@@download/ENCFF270HQG.bigWig GRCh38 released antibody characterized with exemption ENCFF308GZT bigWig signal p-value ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF294QEI, ENCFF446MDK 648439887 ENCODE Processing Pipeline ad25663c53e4fc13ebb9b52703b78525 https://www.encodeproject.org/files/ENCFF308GZT/@@download/ENCFF308GZT.bigWig GRCh38 released antibody characterized with exemption ENCFF368WYF bigWig fold change over control ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF446MDK 644435466 ENCODE Processing Pipeline c3df6373ba1b917fe510ca94531f5667 https://www.encodeproject.org/files/ENCFF368WYF/@@download/ENCFF368WYF.bigWig GRCh38 released antibody characterized with exemption ENCFF211CPA bigWig fold change over control ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF294QEI 584886972 ENCODE Processing Pipeline 036559462bd57c8579bdbee7cb3b09db https://www.encodeproject.org/files/ENCFF211CPA/@@download/ENCFF211CPA.bigWig GRCh38 released antibody characterized with exemption ENCFF887OHO bigWig fold change over control ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF294QEI, ENCFF446MDK 1022791648 ENCODE Processing Pipeline 85ea9850a530102122ad91f02418d5b0 https://www.encodeproject.org/files/ENCFF887OHO/@@download/ENCFF887OHO.bigWig GRCh38 released antibody characterized with exemption ENCFF872SGZ bed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF446MDK 6077650 ENCODE Processing Pipeline 05d243d55e080c84180936e37ab565d3 https://www.encodeproject.org/files/ENCFF872SGZ/@@download/ENCFF872SGZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF428OFF bed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF294QEI 6350655 ENCODE Processing Pipeline 56971d9c39d8d6c258ca5ae2ad9eab85 https://www.encodeproject.org/files/ENCFF428OFF/@@download/ENCFF428OFF.bed.gz GRCh38 released antibody characterized with exemption ENCFF777SIM bed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF294QEI, ENCFF446MDK 6904459 ENCODE Processing Pipeline a51d0b56410ba9eb445ca1cd4d5ba396 https://www.encodeproject.org/files/ENCFF777SIM/@@download/ENCFF777SIM.bed.gz GRCh38 released antibody characterized with exemption ENCFF957GPN bigBed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF872SGZ 13166209 ENCODE Processing Pipeline 175215783937a4aa88df817ecebf181e https://www.encodeproject.org/files/ENCFF957GPN/@@download/ENCFF957GPN.bigBed GRCh38 released antibody characterized with exemption ENCFF708MKO bigBed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF428OFF 13066598 ENCODE Processing Pipeline 8a3325e15b8b5d4fe6cc37a727bf544d https://www.encodeproject.org/files/ENCFF708MKO/@@download/ENCFF708MKO.bigBed GRCh38 released antibody characterized with exemption ENCFF141LSM bigBed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF777SIM 13037627 ENCODE Processing Pipeline 2ef1c31b17c92a5fdbcd1596dda06d56 https://www.encodeproject.org/files/ENCFF141LSM/@@download/ENCFF141LSM.bigBed GRCh38 released antibody characterized with exemption ENCFF577PUV bed narrowPeak conservative idr thresholded peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF428OFF, ENCFF777SIM, ENCFF872SGZ 298257 ENCODE Processing Pipeline e454783206cba7ce7269975b442309a5 https://www.encodeproject.org/files/ENCFF577PUV/@@download/ENCFF577PUV.bed.gz GRCh38 released antibody characterized with exemption ENCFF969FIA bigBed narrowPeak conservative idr thresholded peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF577PUV 547108 ENCODE Processing Pipeline 876faabdcb6b6e544abe80a46f6616fd https://www.encodeproject.org/files/ENCFF969FIA/@@download/ENCFF969FIA.bigBed GRCh38 released antibody characterized with exemption ENCFF713BVZ bed narrowPeak optimal idr thresholded peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF428OFF, ENCFF777SIM, ENCFF872SGZ 305928 ENCODE Processing Pipeline d95bbdca4ba1455f35b2e3851aa80459 https://www.encodeproject.org/files/ENCFF713BVZ/@@download/ENCFF713BVZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF009ZAH bigBed narrowPeak optimal idr thresholded peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF713BVZ 558245 ENCODE Processing Pipeline b1e3a52b9c09275b7137bbd20853e21c https://www.encodeproject.org/files/ENCFF009ZAH/@@download/ENCFF009ZAH.bigBed GRCh38 released antibody characterized with exemption ENCFF601TJN bigWig signal p-value ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF176VLC, ENCFF203ABR 1241572550 ENCODE Processing Pipeline 7e8c1cb3ac939548f1bd55f91e050a72 https://www.encodeproject.org/files/ENCFF601TJN/@@download/ENCFF601TJN.bigWig hg19 released antibody characterized with exemption ENCFF576HSG bigWig signal p-value ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF020TIU, ENCFF203ABR 1368695166 ENCODE Processing Pipeline aa85ac448c9755365a7423d0cac6b5ed https://www.encodeproject.org/files/ENCFF576HSG/@@download/ENCFF576HSG.bigWig hg19 released antibody characterized with exemption ENCFF196JYN bigWig signal p-value ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF020TIU, ENCFF176VLC, ENCFF203ABR 1571598481 ENCODE Processing Pipeline d1d5d8a2cf6c0495a636b8eb8f9cc283 https://www.encodeproject.org/files/ENCFF196JYN/@@download/ENCFF196JYN.bigWig hg19 released antibody characterized with exemption ENCFF084ODA bigWig fold change over control ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF020TIU, ENCFF203ABR 1137475917 ENCODE Processing Pipeline 519ff2b2e8d4117b4433a887852af51a https://www.encodeproject.org/files/ENCFF084ODA/@@download/ENCFF084ODA.bigWig hg19 released antibody characterized with exemption ENCFF248PES bigWig fold change over control ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF176VLC, ENCFF203ABR 1067367423 ENCODE Processing Pipeline e4b4fd41d29424d34588f28e9c781ade https://www.encodeproject.org/files/ENCFF248PES/@@download/ENCFF248PES.bigWig hg19 released antibody characterized with exemption ENCFF214FNF bigWig fold change over control ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF020TIU, ENCFF176VLC, ENCFF203ABR 1632229156 ENCODE Processing Pipeline ccd881ca069c6db53f2fabe40bb6fdbf https://www.encodeproject.org/files/ENCFF214FNF/@@download/ENCFF214FNF.bigWig hg19 released antibody characterized with exemption ENCFF422ZGT bed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF020TIU, ENCFF203ABR 6804452 ENCODE Processing Pipeline 5d6e148c590700b78dbefa0828444121 https://www.encodeproject.org/files/ENCFF422ZGT/@@download/ENCFF422ZGT.bed.gz hg19 released antibody characterized with exemption ENCFF828DTV bed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF020TIU, ENCFF176VLC, ENCFF203ABR 7111731 ENCODE Processing Pipeline a2d2883781a12e1ae6529dc2aa8abb51 https://www.encodeproject.org/files/ENCFF828DTV/@@download/ENCFF828DTV.bed.gz hg19 released antibody characterized with exemption ENCFF378HNS bed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF176VLC, ENCFF203ABR 6815754 ENCODE Processing Pipeline ede3ee264b1da058a6430fc59b8068ff https://www.encodeproject.org/files/ENCFF378HNS/@@download/ENCFF378HNS.bed.gz hg19 released antibody characterized with exemption ENCFF835LDJ bigBed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF378HNS 12990836 ENCODE Processing Pipeline 521e07a641892ad32f50f73bd4160f9a https://www.encodeproject.org/files/ENCFF835LDJ/@@download/ENCFF835LDJ.bigBed hg19 released antibody characterized with exemption ENCFF453VVF bed narrowPeak conservative idr thresholded peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF378HNS, ENCFF422ZGT, ENCFF828DTV 267244 ENCODE Processing Pipeline 800e1bbfbbedf349db4e50a989ba5be6 https://www.encodeproject.org/files/ENCFF453VVF/@@download/ENCFF453VVF.bed.gz hg19 released antibody characterized with exemption ENCFF030CRZ bigBed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF422ZGT 13173968 ENCODE Processing Pipeline ea4429a2ea045f57d47b591e151c59cb https://www.encodeproject.org/files/ENCFF030CRZ/@@download/ENCFF030CRZ.bigBed hg19 released antibody characterized with exemption ENCFF881TVN bigBed narrowPeak peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF828DTV 13005928 ENCODE Processing Pipeline 84178b1f08a4b77ac9c0b57c15b33754 https://www.encodeproject.org/files/ENCFF881TVN/@@download/ENCFF881TVN.bigBed hg19 released antibody characterized with exemption ENCFF630YZM bigBed narrowPeak conservative idr thresholded peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF453VVF 509978 ENCODE Processing Pipeline 533b953e1d8a76e7a6e8993f00a400c9 https://www.encodeproject.org/files/ENCFF630YZM/@@download/ENCFF630YZM.bigBed hg19 released antibody characterized with exemption ENCFF738FXY bigBed narrowPeak optimal idr thresholded peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF545KZH 510707 ENCODE Processing Pipeline b8cbce63a051a212e91c6840d588cc66 https://www.encodeproject.org/files/ENCFF738FXY/@@download/ENCFF738FXY.bigBed hg19 released antibody characterized with exemption ENCFF545KZH bed narrowPeak optimal idr thresholded peaks ENCSR115PIK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF378HNS, ENCFF422ZGT, ENCFF828DTV 267764 ENCODE Processing Pipeline fd8d02890354779f4ffeccdb3fe95492 https://www.encodeproject.org/files/ENCFF545KZH/@@download/ENCFF545KZH.bed.gz hg19 released antibody characterized with exemption ENCFF320DMI fastq reads ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1415907659 Richard Myers, HAIB df9d07c244d5f43ffa8359d0341af65b SRA:SRR5338810 https://www.encodeproject.org/files/ENCFF320DMI/@@download/ENCFF320DMI.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF308NXH fastq reads ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1644962227 Richard Myers, HAIB ab6e2ad5e4e490312c5bb5d8251379e6 SRA:SRR5338811 https://www.encodeproject.org/files/ENCFF308NXH/@@download/ENCFF308NXH.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF601TEC bam unfiltered alignments ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF320DMI, ENCFF643CGH 1629637050 ENCODE Processing Pipeline ea05622f52b94b4191615fad0c21a262 https://www.encodeproject.org/files/ENCFF601TEC/@@download/ENCFF601TEC.bam GRCh38 released antibody characterized with exemption ENCFF109LMR bam unfiltered alignments ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF308NXH, ENCFF643CGH 1875324868 ENCODE Processing Pipeline 6fca9af57d7048348f7e331beb8e36ab https://www.encodeproject.org/files/ENCFF109LMR/@@download/ENCFF109LMR.bam GRCh38 released antibody characterized with exemption ENCFF782NHL bam unfiltered alignments ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF320DMI, ENCFF807MUK 1626564106 ENCODE Processing Pipeline a0391ee6ffc4609995cf543fffc21160 https://www.encodeproject.org/files/ENCFF782NHL/@@download/ENCFF782NHL.bam hg19 released antibody characterized with exemption ENCFF893UTT bam unfiltered alignments ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF308NXH, ENCFF807MUK 1871270342 ENCODE Processing Pipeline 5341a0a8b9de953b42f8856a4686e12d https://www.encodeproject.org/files/ENCFF893UTT/@@download/ENCFF893UTT.bam hg19 released antibody characterized with exemption ENCFF591JSQ bam alignments ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF320DMI, ENCFF643CGH 1176200973 ENCODE Processing Pipeline 00f63db27c01b3d288fbb80f1e7d3569 https://www.encodeproject.org/files/ENCFF591JSQ/@@download/ENCFF591JSQ.bam GRCh38 released antibody characterized with exemption ENCFF539DZV bam alignments ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF320DMI, ENCFF807MUK 1175921518 ENCODE Processing Pipeline a6fb7e72e7f35bc145f673b0c5ab6e2d https://www.encodeproject.org/files/ENCFF539DZV/@@download/ENCFF539DZV.bam hg19 released antibody characterized with exemption ENCFF934ZXS bam alignments ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF308NXH, ENCFF807MUK 1307374240 ENCODE Processing Pipeline c622aaa1121734ca56c495b5ce0de3c7 https://www.encodeproject.org/files/ENCFF934ZXS/@@download/ENCFF934ZXS.bam hg19 released antibody characterized with exemption ENCFF649MWS bam alignments ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF308NXH, ENCFF643CGH 1307882865 ENCODE Processing Pipeline c9590fea145b416eafd8e32e11c1c7b0 https://www.encodeproject.org/files/ENCFF649MWS/@@download/ENCFF649MWS.bam GRCh38 released antibody characterized with exemption ENCFF471NNH bigWig signal p-value ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF649MWS 549261777 ENCODE Processing Pipeline 4d7d661fa4926707195be013daa09c46 https://www.encodeproject.org/files/ENCFF471NNH/@@download/ENCFF471NNH.bigWig GRCh38 released antibody characterized with exemption ENCFF375WUB bigWig signal p-value ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF591JSQ 503424233 ENCODE Processing Pipeline 5ec55cd0e13a1c6567cb03fa3ac9fc09 https://www.encodeproject.org/files/ENCFF375WUB/@@download/ENCFF375WUB.bigWig GRCh38 released antibody characterized with exemption ENCFF889EMW bigWig fold change over control ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF649MWS 518821051 ENCODE Processing Pipeline c50d994071c58ba01cc72a068ba1a0a5 https://www.encodeproject.org/files/ENCFF889EMW/@@download/ENCFF889EMW.bigWig GRCh38 released antibody characterized with exemption ENCFF674CEI bigWig signal p-value ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF591JSQ, ENCFF649MWS 655934383 ENCODE Processing Pipeline 01df2ffa6d6ad760bd5e3004e7a0cb1b https://www.encodeproject.org/files/ENCFF674CEI/@@download/ENCFF674CEI.bigWig GRCh38 released antibody characterized with exemption ENCFF608DQK bigWig fold change over control ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF591JSQ 479106844 ENCODE Processing Pipeline bc44c7fe1668f68df4cd2e54695d40b8 https://www.encodeproject.org/files/ENCFF608DQK/@@download/ENCFF608DQK.bigWig GRCh38 released antibody characterized with exemption ENCFF409IGH bigWig fold change over control ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF591JSQ, ENCFF649MWS 816456020 ENCODE Processing Pipeline 9de2bea7186662f84cb47d5964240e36 https://www.encodeproject.org/files/ENCFF409IGH/@@download/ENCFF409IGH.bigWig GRCh38 released antibody characterized with exemption ENCFF304NFW bed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF649MWS 5831018 ENCODE Processing Pipeline 1003f02319c7176e3ced7977ebd4d493 https://www.encodeproject.org/files/ENCFF304NFW/@@download/ENCFF304NFW.bed.gz GRCh38 released antibody characterized with exemption ENCFF963REE bed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF591JSQ, ENCFF649MWS 6505545 ENCODE Processing Pipeline f8d9625438f1c1f1d379434aa9767893 https://www.encodeproject.org/files/ENCFF963REE/@@download/ENCFF963REE.bed.gz GRCh38 released antibody characterized with exemption ENCFF231YHF bigBed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF304NFW 13109405 ENCODE Processing Pipeline 71052e547ce364805e2c703b9d856b84 https://www.encodeproject.org/files/ENCFF231YHF/@@download/ENCFF231YHF.bigBed GRCh38 released antibody characterized with exemption ENCFF223LFM bed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF591JSQ 5786177 ENCODE Processing Pipeline f50f41f6f84065bf9cfbc37a5fe49719 https://www.encodeproject.org/files/ENCFF223LFM/@@download/ENCFF223LFM.bed.gz GRCh38 released antibody characterized with exemption ENCFF403RUG bigBed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF223LFM 12976239 ENCODE Processing Pipeline ca9fa1724d2a58be3a35901b1d7a92be https://www.encodeproject.org/files/ENCFF403RUG/@@download/ENCFF403RUG.bigBed GRCh38 released antibody characterized with exemption ENCFF788KQA bigBed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF963REE 13162035 ENCODE Processing Pipeline 4d96e72216378152ba0ea0d7b65af606 https://www.encodeproject.org/files/ENCFF788KQA/@@download/ENCFF788KQA.bigBed GRCh38 released antibody characterized with exemption ENCFF850BZK bigBed narrowPeak optimal idr thresholded peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF458WPZ 1412283 ENCODE Processing Pipeline d0eb14156fdfec7cc4e7090762d8d572 https://www.encodeproject.org/files/ENCFF850BZK/@@download/ENCFF850BZK.bigBed GRCh38 released antibody characterized with exemption ENCFF458WPZ bed narrowPeak optimal idr thresholded peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF223LFM, ENCFF304NFW, ENCFF419RSJ, ENCFF963REE 740552 ENCODE Processing Pipeline 69e38e426571a8e2e3222db87355371e https://www.encodeproject.org/files/ENCFF458WPZ/@@download/ENCFF458WPZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF748RLB bigWig signal p-value ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF934ZXS 1181981377 ENCODE Processing Pipeline 202329d6db10ae631260d003090724e8 https://www.encodeproject.org/files/ENCFF748RLB/@@download/ENCFF748RLB.bigWig hg19 released antibody characterized with exemption ENCFF715OXA bigWig signal p-value ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF539DZV, ENCFF934ZXS 1349693555 ENCODE Processing Pipeline 6d619abdee36a79609aee3314ed6d379 https://www.encodeproject.org/files/ENCFF715OXA/@@download/ENCFF715OXA.bigWig hg19 released antibody characterized with exemption ENCFF959SHG bigWig signal p-value ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF539DZV 1225108074 ENCODE Processing Pipeline 6cab367aebd7c872bf8ba584b506e51e https://www.encodeproject.org/files/ENCFF959SHG/@@download/ENCFF959SHG.bigWig hg19 released antibody characterized with exemption ENCFF940EJZ bigWig fold change over control ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF934ZXS 950703137 ENCODE Processing Pipeline 1b002a8089ae17c4ae38ec7d25f5db7a https://www.encodeproject.org/files/ENCFF940EJZ/@@download/ENCFF940EJZ.bigWig hg19 released antibody characterized with exemption ENCFF784RFY bigWig fold change over control ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF539DZV 889301734 ENCODE Processing Pipeline 808fbe2c70639707ac8e9611c114231e https://www.encodeproject.org/files/ENCFF784RFY/@@download/ENCFF784RFY.bigWig hg19 released antibody characterized with exemption ENCFF664JQM bigWig fold change over control ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF539DZV, ENCFF934ZXS 1379235724 ENCODE Processing Pipeline 2720e14e55a454ad18ead124420b3929 https://www.encodeproject.org/files/ENCFF664JQM/@@download/ENCFF664JQM.bigWig hg19 released antibody characterized with exemption ENCFF969XGP bed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF934ZXS 6378259 ENCODE Processing Pipeline 62d1d53fd38c29c88b0dfb60f33df014 https://www.encodeproject.org/files/ENCFF969XGP/@@download/ENCFF969XGP.bed.gz hg19 released antibody characterized with exemption ENCFF993HDF bed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF539DZV 6311512 ENCODE Processing Pipeline 6f9b8610d33c0956a0f84b6a45dab71d https://www.encodeproject.org/files/ENCFF993HDF/@@download/ENCFF993HDF.bed.gz hg19 released antibody characterized with exemption ENCFF683JQJ bigBed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF969XGP 13141059 ENCODE Processing Pipeline 889e7f82d38203fd244c9fd63e0a5eff https://www.encodeproject.org/files/ENCFF683JQJ/@@download/ENCFF683JQJ.bigBed hg19 released antibody characterized with exemption ENCFF405THC bed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF539DZV, ENCFF934ZXS 6761225 ENCODE Processing Pipeline 6a639386832f854fc4686e6d0ce4893e https://www.encodeproject.org/files/ENCFF405THC/@@download/ENCFF405THC.bed.gz hg19 released antibody characterized with exemption ENCFF222OFH bigBed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF405THC 13097864 ENCODE Processing Pipeline 3b058362d752c201da93f5955d2f2d92 https://www.encodeproject.org/files/ENCFF222OFH/@@download/ENCFF222OFH.bigBed hg19 released antibody characterized with exemption ENCFF533KLE bigBed narrowPeak peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF993HDF 12947102 ENCODE Processing Pipeline fa181dada05f8dd34406338403baf9f9 https://www.encodeproject.org/files/ENCFF533KLE/@@download/ENCFF533KLE.bigBed hg19 released antibody characterized with exemption ENCFF548VQF bed narrowPeak conservative idr thresholded peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF405THC, ENCFF969XGP, ENCFF993HDF 725834 ENCODE Processing Pipeline 7dbfc138ca154d2e498f06413289ff13 https://www.encodeproject.org/files/ENCFF548VQF/@@download/ENCFF548VQF.bed.gz hg19 released antibody characterized with exemption ENCFF869DWP bigBed narrowPeak conservative idr thresholded peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF548VQF 1428082 ENCODE Processing Pipeline 6d1baa559e3a08733967f8ba718d5dc2 https://www.encodeproject.org/files/ENCFF869DWP/@@download/ENCFF869DWP.bigBed hg19 released antibody characterized with exemption ENCFF075MKV bed narrowPeak optimal idr thresholded peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF405THC, ENCFF969XGP, ENCFF993HDF 730939 ENCODE Processing Pipeline a789327db791c42e638a1637faa50dd0 https://www.encodeproject.org/files/ENCFF075MKV/@@download/ENCFF075MKV.bed.gz hg19 released antibody characterized with exemption ENCFF207BHB bigBed narrowPeak optimal idr thresholded peaks ENCSR500WXT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RARA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF075MKV 1437727 ENCODE Processing Pipeline 830676e7e09196510a24903962c20c03 https://www.encodeproject.org/files/ENCFF207BHB/@@download/ENCFF207BHB.bigBed hg19 released antibody characterized with exemption ENCFF790RMU fastq reads ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2279635316 Richard Myers, HAIB fd3dce7943b337a2d8939b48a00040d5 SRA:SRR5339623 https://www.encodeproject.org/files/ENCFF790RMU/@@download/ENCFF790RMU.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF616WVB fastq reads ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1723331042 Richard Myers, HAIB e0f7e696e8744ea144fa70ff8cbb377c SRA:SRR5339624 https://www.encodeproject.org/files/ENCFF616WVB/@@download/ENCFF616WVB.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF249BPW bam unfiltered alignments ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF790RMU 2410780370 ENCODE Processing Pipeline aca84cf963bddd858fe18eb635e203e5 https://www.encodeproject.org/files/ENCFF249BPW/@@download/ENCFF249BPW.bam GRCh38 released antibody characterized with exemption ENCFF664MWU bam unfiltered alignments ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF616WVB, ENCFF643CGH 1842798223 ENCODE Processing Pipeline e33505ca6936091f5ab58972fb7e5a39 https://www.encodeproject.org/files/ENCFF664MWU/@@download/ENCFF664MWU.bam GRCh38 released antibody characterized with exemption ENCFF310SUR bam unfiltered alignments ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF616WVB, ENCFF807MUK 1839467079 ENCODE Processing Pipeline 58f1a8c07055263d98c986f941b4907a https://www.encodeproject.org/files/ENCFF310SUR/@@download/ENCFF310SUR.bam hg19 released antibody characterized with exemption ENCFF349QEI bam unfiltered alignments ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF790RMU, ENCFF807MUK 2406079455 ENCODE Processing Pipeline a2ed9c9abbaa48ce655e0e9e337a4bd9 https://www.encodeproject.org/files/ENCFF349QEI/@@download/ENCFF349QEI.bam hg19 released antibody characterized with exemption ENCFF567OGN bam alignments ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF616WVB, ENCFF643CGH 1439307615 ENCODE Processing Pipeline eacd87f90e03493b1efaf0db49f8ea20 https://www.encodeproject.org/files/ENCFF567OGN/@@download/ENCFF567OGN.bam GRCh38 released antibody characterized with exemption ENCFF279BTT bam alignments ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF616WVB, ENCFF807MUK 1438647599 ENCODE Processing Pipeline ded5a6b84c1e3dd391ec40f599f43206 https://www.encodeproject.org/files/ENCFF279BTT/@@download/ENCFF279BTT.bam hg19 released antibody characterized with exemption ENCFF862HYK bam alignments ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF790RMU 1848370199 ENCODE Processing Pipeline 83e8ec17c17d58c657507d98c8282a6f https://www.encodeproject.org/files/ENCFF862HYK/@@download/ENCFF862HYK.bam GRCh38 released antibody characterized with exemption ENCFF497WGL bam alignments ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF790RMU, ENCFF807MUK 1847358536 ENCODE Processing Pipeline df8fcb925d83ae5c99ade53f6e2563a2 https://www.encodeproject.org/files/ENCFF497WGL/@@download/ENCFF497WGL.bam hg19 released antibody characterized with exemption ENCFF005VBX bigWig signal p-value ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF862HYK 644267592 ENCODE Processing Pipeline 677002dee988948e0704338d6175dcda https://www.encodeproject.org/files/ENCFF005VBX/@@download/ENCFF005VBX.bigWig GRCh38 released antibody characterized with exemption ENCFF895HNO bigWig signal p-value ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF567OGN 634829619 ENCODE Processing Pipeline 185e12af03d311a39fc921384d8199d4 https://www.encodeproject.org/files/ENCFF895HNO/@@download/ENCFF895HNO.bigWig GRCh38 released antibody characterized with exemption ENCFF777QNZ bigWig signal p-value ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF567OGN, ENCFF862HYK 667276646 ENCODE Processing Pipeline 742e5f797cb337b0fb82721991d7a3f6 https://www.encodeproject.org/files/ENCFF777QNZ/@@download/ENCFF777QNZ.bigWig GRCh38 released antibody characterized with exemption ENCFF741YVF bigWig fold change over control ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF862HYK 622108039 ENCODE Processing Pipeline 0c6b4156f314efdfaa86a5f9533509e3 https://www.encodeproject.org/files/ENCFF741YVF/@@download/ENCFF741YVF.bigWig GRCh38 released antibody characterized with exemption ENCFF937ZMU bigWig fold change over control ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF567OGN 522653734 ENCODE Processing Pipeline c32dec329898b391817db0d959ac655a https://www.encodeproject.org/files/ENCFF937ZMU/@@download/ENCFF937ZMU.bigWig GRCh38 released antibody characterized with exemption ENCFF485OQI bigWig fold change over control ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF567OGN, ENCFF862HYK 947099724 ENCODE Processing Pipeline b55eb1d992e483d16d5d929ac48dcb25 https://www.encodeproject.org/files/ENCFF485OQI/@@download/ENCFF485OQI.bigWig GRCh38 released antibody characterized with exemption ENCFF102VFY bed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF862HYK 6099684 ENCODE Processing Pipeline 5cc264d47e14b8e3fb3771492d7f961c https://www.encodeproject.org/files/ENCFF102VFY/@@download/ENCFF102VFY.bed.gz GRCh38 released antibody characterized with exemption ENCFF807DCB bed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF567OGN, ENCFF862HYK 6794517 ENCODE Processing Pipeline 3ab4f0c8a2ee53c84796605e066fd2e5 https://www.encodeproject.org/files/ENCFF807DCB/@@download/ENCFF807DCB.bed.gz GRCh38 released antibody characterized with exemption ENCFF058IJE bed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF567OGN 5957119 ENCODE Processing Pipeline 16665931f9ded59f1cb035171c3aa2fa https://www.encodeproject.org/files/ENCFF058IJE/@@download/ENCFF058IJE.bed.gz GRCh38 released antibody characterized with exemption ENCFF152RZH bigBed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF102VFY 13164658 ENCODE Processing Pipeline e26f6af968342d089cb6f337f447b1ec https://www.encodeproject.org/files/ENCFF152RZH/@@download/ENCFF152RZH.bigBed GRCh38 released antibody characterized with exemption ENCFF469NMR bigBed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF058IJE 13151951 ENCODE Processing Pipeline 788240a40fb7aee18fe241a4ad7c635a https://www.encodeproject.org/files/ENCFF469NMR/@@download/ENCFF469NMR.bigBed GRCh38 released antibody characterized with exemption ENCFF047DKK bigBed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF807DCB 13139276 ENCODE Processing Pipeline 214887ef55db069a109a0e6a932fd37e https://www.encodeproject.org/files/ENCFF047DKK/@@download/ENCFF047DKK.bigBed GRCh38 released antibody characterized with exemption ENCFF338JPJ bed narrowPeak conservative idr thresholded peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF058IJE, ENCFF102VFY, ENCFF419RSJ, ENCFF807DCB 493078 ENCODE Processing Pipeline 1f5c9e6da03aafd682a469f77cbb3a09 https://www.encodeproject.org/files/ENCFF338JPJ/@@download/ENCFF338JPJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF753WHJ bigBed narrowPeak optimal idr thresholded peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF963OLI 960372 ENCODE Processing Pipeline f37d3b9e55f4761b26c2e8ad9409199b https://www.encodeproject.org/files/ENCFF753WHJ/@@download/ENCFF753WHJ.bigBed GRCh38 released antibody characterized with exemption ENCFF080PGY bigBed narrowPeak conservative idr thresholded peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF338JPJ 958345 ENCODE Processing Pipeline f148d7283ebe2204aa09538fd9fa80a2 https://www.encodeproject.org/files/ENCFF080PGY/@@download/ENCFF080PGY.bigBed GRCh38 released antibody characterized with exemption ENCFF963OLI bed narrowPeak optimal idr thresholded peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF058IJE, ENCFF102VFY, ENCFF419RSJ, ENCFF807DCB 494318 ENCODE Processing Pipeline b495a0cd3d350109d1fc1046cfa31e9b https://www.encodeproject.org/files/ENCFF963OLI/@@download/ENCFF963OLI.bed.gz GRCh38 released antibody characterized with exemption ENCFF279PAG bigWig signal p-value ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF279BTT 1135149455 ENCODE Processing Pipeline bd9fac86b69ea6c0c07f2e94db2f66c8 https://www.encodeproject.org/files/ENCFF279PAG/@@download/ENCFF279PAG.bigWig hg19 released antibody characterized with exemption ENCFF562WRI bigWig signal p-value ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF497WGL 1237509312 ENCODE Processing Pipeline a90a69aa53cda702c0928f1beeec3eb7 https://www.encodeproject.org/files/ENCFF562WRI/@@download/ENCFF562WRI.bigWig hg19 released antibody characterized with exemption ENCFF983LZD bigWig signal p-value ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF279BTT, ENCFF497WGL 1621617477 ENCODE Processing Pipeline 4033e1280d2dc11bed85c6f2c92b089c https://www.encodeproject.org/files/ENCFF983LZD/@@download/ENCFF983LZD.bigWig hg19 released antibody characterized with exemption ENCFF541HKS bigWig fold change over control ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF497WGL 1135982862 ENCODE Processing Pipeline 3da772f46e41333390479f2e11108291 https://www.encodeproject.org/files/ENCFF541HKS/@@download/ENCFF541HKS.bigWig hg19 released antibody characterized with exemption ENCFF776UDL bigWig fold change over control ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF279BTT 983503315 ENCODE Processing Pipeline 991fcb0cf145c1d65b5e6f6d2b35fec5 https://www.encodeproject.org/files/ENCFF776UDL/@@download/ENCFF776UDL.bigWig hg19 released antibody characterized with exemption ENCFF697FMA bigWig fold change over control ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF279BTT, ENCFF497WGL 1596177638 ENCODE Processing Pipeline e5626d77cc1afb92024bd0b125b0294c https://www.encodeproject.org/files/ENCFF697FMA/@@download/ENCFF697FMA.bigWig hg19 released antibody characterized with exemption ENCFF453VKQ bed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF497WGL 6811325 ENCODE Processing Pipeline 594210d3e8e4ea96bd5998be037332c4 https://www.encodeproject.org/files/ENCFF453VKQ/@@download/ENCFF453VKQ.bed.gz hg19 released antibody characterized with exemption ENCFF349QFY bed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF279BTT, ENCFF497WGL 7038302 ENCODE Processing Pipeline 2190f48af78d154677b7e2c1ca41176c https://www.encodeproject.org/files/ENCFF349QFY/@@download/ENCFF349QFY.bed.gz hg19 released antibody characterized with exemption ENCFF780MVK bed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF279BTT 6594136 ENCODE Processing Pipeline 1ed40869f9d54b9da00cfb5799464aa6 https://www.encodeproject.org/files/ENCFF780MVK/@@download/ENCFF780MVK.bed.gz hg19 released antibody characterized with exemption ENCFF147QAB bigBed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF453VKQ 13207506 ENCODE Processing Pipeline 94194b0eeb688d1db9b8d92cef2ac467 https://www.encodeproject.org/files/ENCFF147QAB/@@download/ENCFF147QAB.bigBed hg19 released antibody characterized with exemption ENCFF257OLY bigBed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF349QFY 13084215 ENCODE Processing Pipeline ad3ead9fd312339d6638c170f4cb9ac8 https://www.encodeproject.org/files/ENCFF257OLY/@@download/ENCFF257OLY.bigBed hg19 released antibody characterized with exemption ENCFF524KAN bigBed narrowPeak peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF780MVK 13136074 ENCODE Processing Pipeline ae7dd7b3bbd09950e279d4b380ef8b87 https://www.encodeproject.org/files/ENCFF524KAN/@@download/ENCFF524KAN.bigBed hg19 released antibody characterized with exemption ENCFF402MOI bed narrowPeak optimal idr thresholded peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF349QFY, ENCFF453VKQ, ENCFF780MVK 450880 ENCODE Processing Pipeline e3e8a3a41e6dc378f71169bf4355e0fc https://www.encodeproject.org/files/ENCFF402MOI/@@download/ENCFF402MOI.bed.gz hg19 released antibody characterized with exemption ENCFF507LZT bigBed narrowPeak optimal idr thresholded peaks ENCSR966PJY ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIXL1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF402MOI 755859 ENCODE Processing Pipeline d4f3fe1f266bbbf58c3c3725a3f5e067 https://www.encodeproject.org/files/ENCFF507LZT/@@download/ENCFF507LZT.bigBed hg19 released antibody characterized with exemption ENCFF503DWZ fastq reads ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2109602865 Richard Myers, HAIB 55fdea54293a10bb91d50beb303507fa SRA:SRR5338821 https://www.encodeproject.org/files/ENCFF503DWZ/@@download/ENCFF503DWZ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF414QOO fastq reads ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2173113057 Richard Myers, HAIB fc436893de911485435bef3aa70cbf32 SRA:SRR5338820 https://www.encodeproject.org/files/ENCFF414QOO/@@download/ENCFF414QOO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF674GBH bam unfiltered alignments ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF503DWZ, ENCFF643CGH 2333458835 ENCODE Processing Pipeline b72ced5c9615da8373e1a8b885713757 https://www.encodeproject.org/files/ENCFF674GBH/@@download/ENCFF674GBH.bam GRCh38 released antibody characterized with exemption ENCFF137PQJ bam unfiltered alignments ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF503DWZ, ENCFF807MUK 2328053620 ENCODE Processing Pipeline dbddfae1043841b0d671372f0b54c2f5 https://www.encodeproject.org/files/ENCFF137PQJ/@@download/ENCFF137PQJ.bam hg19 released antibody characterized with exemption ENCFF196MHW bam unfiltered alignments ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF414QOO, ENCFF643CGH 2401383889 ENCODE Processing Pipeline d05bf9b2d349ed5cf959b86f43f6d90e https://www.encodeproject.org/files/ENCFF196MHW/@@download/ENCFF196MHW.bam GRCh38 released antibody characterized with exemption ENCFF910PZS bam unfiltered alignments ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF414QOO, ENCFF807MUK 2395906957 ENCODE Processing Pipeline f846f8aee2de19e4937e2bc794964016 https://www.encodeproject.org/files/ENCFF910PZS/@@download/ENCFF910PZS.bam hg19 released antibody characterized with exemption ENCFF002JBN bam alignments ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF503DWZ, ENCFF807MUK 1690825859 ENCODE Processing Pipeline 0c900a9e47cf84a0a85f8aa5c87c09d7 https://www.encodeproject.org/files/ENCFF002JBN/@@download/ENCFF002JBN.bam hg19 released antibody characterized with exemption ENCFF852ZPS bam alignments ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF503DWZ, ENCFF643CGH 1691832631 ENCODE Processing Pipeline 108c131f3065514af1ab1bbbe1ebe4ee https://www.encodeproject.org/files/ENCFF852ZPS/@@download/ENCFF852ZPS.bam GRCh38 released antibody characterized with exemption ENCFF783EIO bam alignments ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF414QOO, ENCFF643CGH 1764240034 ENCODE Processing Pipeline 1a67af784748513233439a7594103817 https://www.encodeproject.org/files/ENCFF783EIO/@@download/ENCFF783EIO.bam GRCh38 released antibody characterized with exemption ENCFF812AFI bam alignments ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF414QOO, ENCFF807MUK 1763252877 ENCODE Processing Pipeline 58200b869892093104beadffb5588995 https://www.encodeproject.org/files/ENCFF812AFI/@@download/ENCFF812AFI.bam hg19 released antibody characterized with exemption ENCFF628HVK bigWig signal p-value ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF783EIO 648728315 ENCODE Processing Pipeline b21e984000f0cd2f88e3d96fca00895a https://www.encodeproject.org/files/ENCFF628HVK/@@download/ENCFF628HVK.bigWig GRCh38 released antibody characterized with exemption ENCFF890JGI bigWig signal p-value ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF852ZPS 609882103 ENCODE Processing Pipeline 7e5e188d0abc018a63a5deb592c22a13 https://www.encodeproject.org/files/ENCFF890JGI/@@download/ENCFF890JGI.bigWig GRCh38 released antibody characterized with exemption ENCFF144RER bigWig signal p-value ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF783EIO, ENCFF852ZPS 637607652 ENCODE Processing Pipeline a56d3a3257a347df4955810bd68a4939 https://www.encodeproject.org/files/ENCFF144RER/@@download/ENCFF144RER.bigWig GRCh38 released antibody characterized with exemption ENCFF214LRH bigWig fold change over control ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF783EIO 646175060 ENCODE Processing Pipeline 120d20fd969ec337bb9966def085a8d2 https://www.encodeproject.org/files/ENCFF214LRH/@@download/ENCFF214LRH.bigWig GRCh38 released antibody characterized with exemption ENCFF440TDW bigWig fold change over control ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF852ZPS 593404675 ENCODE Processing Pipeline 0aa4561dd265b25d9304c99b1d641c5d https://www.encodeproject.org/files/ENCFF440TDW/@@download/ENCFF440TDW.bigWig GRCh38 released antibody characterized with exemption ENCFF404QLC bigWig fold change over control ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF783EIO, ENCFF852ZPS 1029443650 ENCODE Processing Pipeline f74d37de4bd29b53f96780963784c6e9 https://www.encodeproject.org/files/ENCFF404QLC/@@download/ENCFF404QLC.bigWig GRCh38 released antibody characterized with exemption ENCFF660IJM bed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF783EIO 6153221 ENCODE Processing Pipeline 0af7f91b794149a8752df7c9cb2179fc https://www.encodeproject.org/files/ENCFF660IJM/@@download/ENCFF660IJM.bed.gz GRCh38 released antibody characterized with exemption ENCFF252CSI bed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF852ZPS 6362944 ENCODE Processing Pipeline 7c533eb95cac2dc6018f35c6e7c67c73 https://www.encodeproject.org/files/ENCFF252CSI/@@download/ENCFF252CSI.bed.gz GRCh38 released antibody characterized with exemption ENCFF726JQT bed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF783EIO, ENCFF852ZPS 6903191 ENCODE Processing Pipeline c56c5904db4d3a4f3b0210c14975ae41 https://www.encodeproject.org/files/ENCFF726JQT/@@download/ENCFF726JQT.bed.gz GRCh38 released antibody characterized with exemption ENCFF958NMV bigBed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF660IJM 13117715 ENCODE Processing Pipeline a2887f946897f40422f66fdf7f9ed851 https://www.encodeproject.org/files/ENCFF958NMV/@@download/ENCFF958NMV.bigBed GRCh38 released antibody characterized with exemption ENCFF048WXX bigBed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF252CSI 13131050 ENCODE Processing Pipeline 0b198130f2a65251593de8076d39064a https://www.encodeproject.org/files/ENCFF048WXX/@@download/ENCFF048WXX.bigBed GRCh38 released antibody characterized with exemption ENCFF851YVH bigBed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF726JQT 13073346 ENCODE Processing Pipeline 399fcf3b2b0b70857475498ea0d0b00f https://www.encodeproject.org/files/ENCFF851YVH/@@download/ENCFF851YVH.bigBed GRCh38 released antibody characterized with exemption ENCFF615GQC bed narrowPeak conservative idr thresholded peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF252CSI, ENCFF419RSJ, ENCFF660IJM, ENCFF726JQT 390215 ENCODE Processing Pipeline 310cc414cf579e49d01a46c3a1637630 https://www.encodeproject.org/files/ENCFF615GQC/@@download/ENCFF615GQC.bed.gz GRCh38 released antibody characterized with exemption ENCFF253CWZ bed narrowPeak optimal idr thresholded peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF252CSI, ENCFF419RSJ, ENCFF660IJM, ENCFF726JQT 425309 ENCODE Processing Pipeline d2f26d30b637145ed426f2b114813d33 https://www.encodeproject.org/files/ENCFF253CWZ/@@download/ENCFF253CWZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF683KCZ bigBed narrowPeak optimal idr thresholded peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF253CWZ 820312 ENCODE Processing Pipeline f2f29780e1e7dfddf69287397bcf919e https://www.encodeproject.org/files/ENCFF683KCZ/@@download/ENCFF683KCZ.bigBed GRCh38 released antibody characterized with exemption ENCFF427BNP bigBed narrowPeak conservative idr thresholded peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF615GQC 766587 ENCODE Processing Pipeline 127f1721e88dfafec079ab275b5bc34f https://www.encodeproject.org/files/ENCFF427BNP/@@download/ENCFF427BNP.bigBed GRCh38 released antibody characterized with exemption ENCFF021HEK bigWig signal p-value ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF812AFI 1371358255 ENCODE Processing Pipeline 386e3fe4993b6b234e78f370120d7979 https://www.encodeproject.org/files/ENCFF021HEK/@@download/ENCFF021HEK.bigWig hg19 released antibody characterized with exemption ENCFF829JIA bigWig signal p-value ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF002JBN, ENCFF203ABR 1166850855 ENCODE Processing Pipeline 541e76f455363557b0dfc6bec15bdc91 https://www.encodeproject.org/files/ENCFF829JIA/@@download/ENCFF829JIA.bigWig hg19 released antibody characterized with exemption ENCFF122EOB bigWig signal p-value ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF002JBN, ENCFF203ABR, ENCFF812AFI 1353221721 ENCODE Processing Pipeline d1eee2b7036250931fa011ffe79ed8e7 https://www.encodeproject.org/files/ENCFF122EOB/@@download/ENCFF122EOB.bigWig hg19 released antibody characterized with exemption ENCFF061FPP bigWig fold change over control ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF812AFI 1342740625 ENCODE Processing Pipeline 24085aabe65d734d43fdf289b586cbca https://www.encodeproject.org/files/ENCFF061FPP/@@download/ENCFF061FPP.bigWig hg19 released antibody characterized with exemption ENCFF197ZYN bigWig fold change over control ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF002JBN, ENCFF203ABR 1125793318 ENCODE Processing Pipeline 221a5effb38320b031e5c05af1944892 https://www.encodeproject.org/files/ENCFF197ZYN/@@download/ENCFF197ZYN.bigWig hg19 released antibody characterized with exemption ENCFF220ZAV bigWig fold change over control ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF002JBN, ENCFF203ABR, ENCFF812AFI 1723158428 ENCODE Processing Pipeline c08fe36434d2a7c31dc897ab3f40960c https://www.encodeproject.org/files/ENCFF220ZAV/@@download/ENCFF220ZAV.bigWig hg19 released antibody characterized with exemption ENCFF592XOZ bed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF812AFI 7091873 ENCODE Processing Pipeline 62bd68e7d446973230c3f75a8ac39eb2 https://www.encodeproject.org/files/ENCFF592XOZ/@@download/ENCFF592XOZ.bed.gz hg19 released antibody characterized with exemption ENCFF478HJZ bed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF002JBN, ENCFF203ABR 6793978 ENCODE Processing Pipeline 6113f8155a3ff1a367aeefca94b33c59 https://www.encodeproject.org/files/ENCFF478HJZ/@@download/ENCFF478HJZ.bed.gz hg19 released antibody characterized with exemption ENCFF097CCR bed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF002JBN, ENCFF203ABR, ENCFF812AFI 7240451 ENCODE Processing Pipeline 7236c7d760ad971536390592963774af https://www.encodeproject.org/files/ENCFF097CCR/@@download/ENCFF097CCR.bed.gz hg19 released antibody characterized with exemption ENCFF521YFC bigBed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF592XOZ 12881605 ENCODE Processing Pipeline 4fba8df13f498d26c55e5553eb67a369 https://www.encodeproject.org/files/ENCFF521YFC/@@download/ENCFF521YFC.bigBed hg19 released antibody characterized with exemption ENCFF322JAN bigBed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF478HJZ 13076500 ENCODE Processing Pipeline 24e053c701b4e1b216135a5a07644ce5 https://www.encodeproject.org/files/ENCFF322JAN/@@download/ENCFF322JAN.bigBed hg19 released antibody characterized with exemption ENCFF145WHG bigBed narrowPeak peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF097CCR 12654530 ENCODE Processing Pipeline e9e8282ce59281cdb66d2679c1c50b1c https://www.encodeproject.org/files/ENCFF145WHG/@@download/ENCFF145WHG.bigBed hg19 released antibody characterized with exemption ENCFF315YNI bed narrowPeak conservative idr thresholded peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF097CCR, ENCFF478HJZ, ENCFF592XOZ 349662 ENCODE Processing Pipeline 75ad00485bbc8b5b97f06f0fca222008 https://www.encodeproject.org/files/ENCFF315YNI/@@download/ENCFF315YNI.bed.gz hg19 released antibody characterized with exemption ENCFF171YGF bigBed narrowPeak conservative idr thresholded peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF315YNI 716874 ENCODE Processing Pipeline f6991d3052dab6bdeca2a7242b9ccb92 https://www.encodeproject.org/files/ENCFF171YGF/@@download/ENCFF171YGF.bigBed hg19 released antibody characterized with exemption ENCFF629ZKI bigBed narrowPeak optimal idr thresholded peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF849MAQ 715317 ENCODE Processing Pipeline 52da87ae5edc042026d19f4649d1438c https://www.encodeproject.org/files/ENCFF629ZKI/@@download/ENCFF629ZKI.bigBed hg19 released antibody characterized with exemption ENCFF849MAQ bed narrowPeak optimal idr thresholded peaks ENCSR396SOH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF792-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF097CCR, ENCFF478HJZ, ENCFF592XOZ 348114 ENCODE Processing Pipeline 39cd59f63fa3a6458cb5370e7418e573 https://www.encodeproject.org/files/ENCFF849MAQ/@@download/ENCFF849MAQ.bed.gz hg19 released antibody characterized with exemption ENCFF873VOO fastq reads ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2019789132 Richard Myers, HAIB 379dad44fba13ee7891d8b2b8c4d042d SRA:SRR5339282 https://www.encodeproject.org/files/ENCFF873VOO/@@download/ENCFF873VOO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF856RPX fastq reads ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1319604464 Richard Myers, HAIB 7de566f70c860c5532330ad44c41499b SRA:SRR5339283 https://www.encodeproject.org/files/ENCFF856RPX/@@download/ENCFF856RPX.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF866NMP bam unfiltered alignments ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF873VOO 2319666234 ENCODE Processing Pipeline a0cdfeac1db4fb998e792d66f88b6943 https://www.encodeproject.org/files/ENCFF866NMP/@@download/ENCFF866NMP.bam GRCh38 released antibody characterized with exemption ENCFF496IFI bam unfiltered alignments ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF856RPX 1540248567 ENCODE Processing Pipeline 816096e0ec87c539d43ba18efbc02dcb https://www.encodeproject.org/files/ENCFF496IFI/@@download/ENCFF496IFI.bam hg19 released antibody characterized with exemption ENCFF366HVP bam unfiltered alignments ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF873VOO 2315627626 ENCODE Processing Pipeline 2b9e92c78772232936cd0a6a636c69c1 https://www.encodeproject.org/files/ENCFF366HVP/@@download/ENCFF366HVP.bam hg19 released antibody characterized with exemption ENCFF220CFA bam unfiltered alignments ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF856RPX 1542854552 ENCODE Processing Pipeline b0c8c8f0c394ea9b6a9e5bf087b434e1 https://www.encodeproject.org/files/ENCFF220CFA/@@download/ENCFF220CFA.bam GRCh38 released antibody characterized with exemption ENCFF812EKJ bam alignments ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF856RPX 1144031334 ENCODE Processing Pipeline 21f2d6e3b3f3a3a20da57b8f92b3010f https://www.encodeproject.org/files/ENCFF812EKJ/@@download/ENCFF812EKJ.bam hg19 released antibody characterized with exemption ENCFF314YLR bam alignments ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF873VOO 1727362895 ENCODE Processing Pipeline 92ba5945b4434f82fff9553e8bfc9dd4 https://www.encodeproject.org/files/ENCFF314YLR/@@download/ENCFF314YLR.bam GRCh38 released antibody characterized with exemption ENCFF137QSY bam alignments ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF873VOO 1726725738 ENCODE Processing Pipeline 7c4bfc79be62aed5b5906e1e04b2551b https://www.encodeproject.org/files/ENCFF137QSY/@@download/ENCFF137QSY.bam hg19 released antibody characterized with exemption ENCFF560LJI bam alignments ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF856RPX 1144382967 ENCODE Processing Pipeline 807f27917f1b406740ead891a4cb5ba4 https://www.encodeproject.org/files/ENCFF560LJI/@@download/ENCFF560LJI.bam GRCh38 released antibody characterized with exemption ENCFF270AXI bigWig signal p-value ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF314YLR 631718009 ENCODE Processing Pipeline a2ba7c84dc1293b4583264ec258599ea https://www.encodeproject.org/files/ENCFF270AXI/@@download/ENCFF270AXI.bigWig GRCh38 released antibody characterized with exemption ENCFF207IYI bigWig signal p-value ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF560LJI 587660822 ENCODE Processing Pipeline 00ef8efff2839234784204f666b3b817 https://www.encodeproject.org/files/ENCFF207IYI/@@download/ENCFF207IYI.bigWig GRCh38 released antibody characterized with exemption ENCFF962KJF bigWig signal p-value ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF314YLR, ENCFF560LJI 656284642 ENCODE Processing Pipeline 27ce804d1c1c9a3e7867c6771ac6f6b4 https://www.encodeproject.org/files/ENCFF962KJF/@@download/ENCFF962KJF.bigWig GRCh38 released antibody characterized with exemption ENCFF619BRV bigWig fold change over control ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF314YLR 611230378 ENCODE Processing Pipeline f211bfddd80cc9bfc13235090406561b https://www.encodeproject.org/files/ENCFF619BRV/@@download/ENCFF619BRV.bigWig GRCh38 released antibody characterized with exemption ENCFF847ZHC bigWig fold change over control ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF560LJI 432573206 ENCODE Processing Pipeline 7d755497656ee9950acbf6b3f5448e8a https://www.encodeproject.org/files/ENCFF847ZHC/@@download/ENCFF847ZHC.bigWig GRCh38 released antibody characterized with exemption ENCFF439CMK bigWig fold change over control ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF314YLR, ENCFF560LJI 876284271 ENCODE Processing Pipeline 8ae7db0f8f5e67b75794eefdb6ead004 https://www.encodeproject.org/files/ENCFF439CMK/@@download/ENCFF439CMK.bigWig GRCh38 released antibody characterized with exemption ENCFF635DPR bed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF314YLR 6472967 ENCODE Processing Pipeline bb70bec264514723cc6b0cf4eb09fa16 https://www.encodeproject.org/files/ENCFF635DPR/@@download/ENCFF635DPR.bed.gz GRCh38 released antibody characterized with exemption ENCFF553NCT bed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF560LJI 5922585 ENCODE Processing Pipeline 03e0dbbe92051c0c80422fe45900d730 https://www.encodeproject.org/files/ENCFF553NCT/@@download/ENCFF553NCT.bed.gz GRCh38 released antibody characterized with exemption ENCFF065UMU bigBed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF635DPR 12979025 ENCODE Processing Pipeline 8a51aa9c41f12a45eb2252ac212748a3 https://www.encodeproject.org/files/ENCFF065UMU/@@download/ENCFF065UMU.bigBed GRCh38 released antibody characterized with exemption ENCFF663IJW bed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF314YLR, ENCFF560LJI 6756522 ENCODE Processing Pipeline 64bec2c29938de9368b75658101d503b https://www.encodeproject.org/files/ENCFF663IJW/@@download/ENCFF663IJW.bed.gz GRCh38 released antibody characterized with exemption ENCFF480NOF bigBed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF553NCT 12963560 ENCODE Processing Pipeline 92ae86387b1eb90a276917769e722ff3 https://www.encodeproject.org/files/ENCFF480NOF/@@download/ENCFF480NOF.bigBed GRCh38 released antibody characterized with exemption ENCFF524QOB bigBed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF663IJW 12912401 ENCODE Processing Pipeline b049005eb10dd9d417a04201e8c930bb https://www.encodeproject.org/files/ENCFF524QOB/@@download/ENCFF524QOB.bigBed GRCh38 released antibody characterized with exemption ENCFF503PQW bed narrowPeak conservative idr thresholded peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF553NCT, ENCFF635DPR, ENCFF663IJW 654812 ENCODE Processing Pipeline 3d6df4efbeb02674e3f0891516727fc1 https://www.encodeproject.org/files/ENCFF503PQW/@@download/ENCFF503PQW.bed.gz GRCh38 released antibody characterized with exemption ENCFF176IFN bigBed narrowPeak conservative idr thresholded peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF503PQW 1229712 ENCODE Processing Pipeline 1234a0dbeeddc69df2f20e0c2bfd2867 https://www.encodeproject.org/files/ENCFF176IFN/@@download/ENCFF176IFN.bigBed GRCh38 released antibody characterized with exemption ENCFF695CFM bigBed narrowPeak optimal idr thresholded peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF080FAU 1238164 ENCODE Processing Pipeline 45242596f8e227420ac1075d0dd0cba4 https://www.encodeproject.org/files/ENCFF695CFM/@@download/ENCFF695CFM.bigBed GRCh38 released antibody characterized with exemption ENCFF080FAU bed narrowPeak optimal idr thresholded peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF553NCT, ENCFF635DPR, ENCFF663IJW 661301 ENCODE Processing Pipeline c2795217ad917b360aedd062434237a1 https://www.encodeproject.org/files/ENCFF080FAU/@@download/ENCFF080FAU.bed.gz GRCh38 released antibody characterized with exemption ENCFF950SNW bigWig signal p-value ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF137QSY, ENCFF203ABR 1308434160 ENCODE Processing Pipeline 39782d967d9266fb6ac3015ddf23b681 https://www.encodeproject.org/files/ENCFF950SNW/@@download/ENCFF950SNW.bigWig hg19 released antibody characterized with exemption ENCFF969LJW bigWig signal p-value ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF812EKJ 1170566969 ENCODE Processing Pipeline 855e8de9c78232975cdd80761878c48a https://www.encodeproject.org/files/ENCFF969LJW/@@download/ENCFF969LJW.bigWig hg19 released antibody characterized with exemption ENCFF430ABI bigWig signal p-value ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF137QSY, ENCFF203ABR, ENCFF812EKJ 1383471088 ENCODE Processing Pipeline 0ceb0c9f4db3bbd2a64f8d3e3b6fffbc https://www.encodeproject.org/files/ENCFF430ABI/@@download/ENCFF430ABI.bigWig hg19 released antibody characterized with exemption ENCFF095OTP bigWig fold change over control ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF137QSY, ENCFF203ABR 1115716047 ENCODE Processing Pipeline c9e3833086d70d817b2ff802715d0fd6 https://www.encodeproject.org/files/ENCFF095OTP/@@download/ENCFF095OTP.bigWig hg19 released antibody characterized with exemption ENCFF176VVT bigWig fold change over control ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF812EKJ 845220033 ENCODE Processing Pipeline da186d86e92b551befe3585cb05a1290 https://www.encodeproject.org/files/ENCFF176VVT/@@download/ENCFF176VVT.bigWig hg19 released antibody characterized with exemption ENCFF172EWV bigWig fold change over control ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF137QSY, ENCFF203ABR, ENCFF812EKJ 1502623835 ENCODE Processing Pipeline 540a21108fa57ca41f7dc4ea38def4ac https://www.encodeproject.org/files/ENCFF172EWV/@@download/ENCFF172EWV.bigWig hg19 released antibody characterized with exemption ENCFF233SWX bed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF137QSY, ENCFF203ABR 6895557 ENCODE Processing Pipeline 5e56bccc1a809447eda14f2747cc3bcc https://www.encodeproject.org/files/ENCFF233SWX/@@download/ENCFF233SWX.bed.gz hg19 released antibody characterized with exemption ENCFF894NFO bed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF812EKJ 6541321 ENCODE Processing Pipeline 961785eb39b5f3d1069b55b9e75f0702 https://www.encodeproject.org/files/ENCFF894NFO/@@download/ENCFF894NFO.bed.gz hg19 released antibody characterized with exemption ENCFF759QMB bed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF137QSY, ENCFF203ABR, ENCFF812EKJ 7076285 ENCODE Processing Pipeline 9d6ceb166229080c2f53437081afea86 https://www.encodeproject.org/files/ENCFF759QMB/@@download/ENCFF759QMB.bed.gz hg19 released antibody characterized with exemption ENCFF320IJX bigBed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF233SWX 13001799 ENCODE Processing Pipeline 44d9023c9b902f35512b6b52430e4af1 https://www.encodeproject.org/files/ENCFF320IJX/@@download/ENCFF320IJX.bigBed hg19 released antibody characterized with exemption ENCFF293WFB bigBed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF894NFO 12989657 ENCODE Processing Pipeline 08066fd3e91170e998b32580a392a1de https://www.encodeproject.org/files/ENCFF293WFB/@@download/ENCFF293WFB.bigBed hg19 released antibody characterized with exemption ENCFF405DSY bed narrowPeak conservative idr thresholded peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF233SWX, ENCFF759QMB, ENCFF894NFO 677633 ENCODE Processing Pipeline f05f810940d183e9ac8d32887b6c8319 https://www.encodeproject.org/files/ENCFF405DSY/@@download/ENCFF405DSY.bed.gz hg19 released antibody characterized with exemption ENCFF348SJR bigBed narrowPeak conservative idr thresholded peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF405DSY 1332182 ENCODE Processing Pipeline bf072e56bded1e68c1b8cf7717344f69 https://www.encodeproject.org/files/ENCFF348SJR/@@download/ENCFF348SJR.bigBed hg19 released antibody characterized with exemption ENCFF712TCJ bed narrowPeak optimal idr thresholded peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF233SWX, ENCFF759QMB, ENCFF894NFO 683051 ENCODE Processing Pipeline f98bd0e50928b4854de250c17a364d3a https://www.encodeproject.org/files/ENCFF712TCJ/@@download/ENCFF712TCJ.bed.gz hg19 released antibody characterized with exemption ENCFF059EMY bigBed narrowPeak peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF759QMB 13100465 ENCODE Processing Pipeline ee7bf745100fe0595cac12cf9fc83e06 https://www.encodeproject.org/files/ENCFF059EMY/@@download/ENCFF059EMY.bigBed hg19 released antibody characterized with exemption ENCFF255STT bigBed narrowPeak optimal idr thresholded peaks ENCSR770AOR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ELF3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF712TCJ 1338581 ENCODE Processing Pipeline cde90a6eb6b73daa755698d116cc81c4 https://www.encodeproject.org/files/ENCFF255STT/@@download/ENCFF255STT.bigBed hg19 released antibody characterized with exemption ENCFF699XDW fastq reads ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 1 50 single-ended 1030596607 Richard Myers, HAIB 5976ccb379260d0cd20f61d1a2030063 SRA:SRR5331340 https://www.encodeproject.org/files/ENCFF699XDW/@@download/ENCFF699XDW.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption ENCFF470IAE fastq reads ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 1 50 single-ended 1074221866 Richard Myers, HAIB d78dec7b11e04c37d3183430318b01fa SRA:SRR5331341 https://www.encodeproject.org/files/ENCFF470IAE/@@download/ENCFF470IAE.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption ENCFF601XIH bam unfiltered alignments ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 50 ENCFF643CGH, ENCFF699XDW 1153114750 ENCODE Processing Pipeline 5cc55747c761d86ef3515612e81824ff https://www.encodeproject.org/files/ENCFF601XIH/@@download/ENCFF601XIH.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF816NSF bam unfiltered alignments ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 50 ENCFF470IAE, ENCFF807MUK 1213761207 ENCODE Processing Pipeline aa8f996d99c527384114835cd48dc0ab https://www.encodeproject.org/files/ENCFF816NSF/@@download/ENCFF816NSF.bam hg19 released control low read depth, antibody characterized with exemption ENCFF480XML bam unfiltered alignments ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 50 ENCFF699XDW, ENCFF807MUK 1148778264 ENCODE Processing Pipeline 2a0b1e0f5bd7e1bfacd9696bf7a56cef https://www.encodeproject.org/files/ENCFF480XML/@@download/ENCFF480XML.bam hg19 released control low read depth, antibody characterized with exemption ENCFF054MPE bam alignments ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 50 ENCFF699XDW, ENCFF807MUK 874608334 ENCODE Processing Pipeline 524edd686b0a85189637ee543f3c37a1 https://www.encodeproject.org/files/ENCFF054MPE/@@download/ENCFF054MPE.bam hg19 released control low read depth, antibody characterized with exemption ENCFF968PCC bam alignments ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 50 ENCFF470IAE, ENCFF807MUK 909534840 ENCODE Processing Pipeline 7a6ffc4b65485a82d1a68afa9a795535 https://www.encodeproject.org/files/ENCFF968PCC/@@download/ENCFF968PCC.bam hg19 released control low read depth, antibody characterized with exemption ENCFF848EGL bam unfiltered alignments ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 50 ENCFF470IAE, ENCFF643CGH 1219203845 ENCODE Processing Pipeline 0f140eda48647ce2be08271c23a129f5 https://www.encodeproject.org/files/ENCFF848EGL/@@download/ENCFF848EGL.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF681OPS bam alignments ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 50 ENCFF643CGH, ENCFF699XDW 874364556 ENCODE Processing Pipeline 7407c75168b33ffb8331e0729f40af5c https://www.encodeproject.org/files/ENCFF681OPS/@@download/ENCFF681OPS.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF070PRN bam alignments ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 50 ENCFF470IAE, ENCFF643CGH 909471115 ENCODE Processing Pipeline c15b5797fbef8f407b484122f5e10cb5 https://www.encodeproject.org/files/ENCFF070PRN/@@download/ENCFF070PRN.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF176KMF bed narrowPeak optimal idr thresholded peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF001TDO, ENCFF295HXB, ENCFF453UZM, ENCFF837FJB 193128 ENCODE Processing Pipeline ce0f99a94593258bc7e60325d0302158 https://www.encodeproject.org/files/ENCFF176KMF/@@download/ENCFF176KMF.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF295HXB bed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 ENCFF023YTY, ENCFF968PCC 5808975 ENCODE Processing Pipeline 6be4910cb1f430a3f6eb8df1151940e1 https://www.encodeproject.org/files/ENCFF295HXB/@@download/ENCFF295HXB.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF837FJB bed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 ENCFF023YTY, ENCFF054MPE 5916062 ENCODE Processing Pipeline 0862091ce74776d10642d4dcbc146d70 https://www.encodeproject.org/files/ENCFF837FJB/@@download/ENCFF837FJB.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF453UZM bed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF023YTY, ENCFF054MPE, ENCFF968PCC 6569318 ENCODE Processing Pipeline 7fe8a063d394c45fd6f46054ac10865f https://www.encodeproject.org/files/ENCFF453UZM/@@download/ENCFF453UZM.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF586DWB bed narrowPeak conservative idr thresholded peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF001TDO, ENCFF295HXB, ENCFF453UZM, ENCFF837FJB 180311 ENCODE Processing Pipeline 628a49170b6dee579b0e5b24cca293f1 https://www.encodeproject.org/files/ENCFF586DWB/@@download/ENCFF586DWB.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF830BXZ bigBed narrowPeak optimal idr thresholded peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF176KMF 431759 ENCODE Processing Pipeline a9faa850aa3d1a312d40c7a9cc3ed226 https://www.encodeproject.org/files/ENCFF830BXZ/@@download/ENCFF830BXZ.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF481WVS bigWig signal p-value ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 ENCFF023YTY, ENCFF968PCC 424730014 ENCODE Processing Pipeline e9cc8603f2299106f54148873163a8a5 https://www.encodeproject.org/files/ENCFF481WVS/@@download/ENCFF481WVS.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF553LPP bigWig signal p-value ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF023YTY, ENCFF054MPE, ENCFF968PCC 420756708 ENCODE Processing Pipeline ea74bbd39fed593e55db4380b985d296 https://www.encodeproject.org/files/ENCFF553LPP/@@download/ENCFF553LPP.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF982KJK bigWig signal p-value ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 ENCFF023YTY, ENCFF054MPE 422529758 ENCODE Processing Pipeline 6719d7dfac5ecc8949e649ae3acdf026 https://www.encodeproject.org/files/ENCFF982KJK/@@download/ENCFF982KJK.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF461AKB bigWig fold change over control ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 ENCFF023YTY, ENCFF054MPE 374779293 ENCODE Processing Pipeline fe914a742bf0f6c293e6f55d68278bdb https://www.encodeproject.org/files/ENCFF461AKB/@@download/ENCFF461AKB.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF837AEU bigWig fold change over control ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF023YTY, ENCFF054MPE, ENCFF968PCC 658591985 ENCODE Processing Pipeline 288696746e5d095b51b624d977552022 https://www.encodeproject.org/files/ENCFF837AEU/@@download/ENCFF837AEU.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF822LFM bigWig fold change over control ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 ENCFF023YTY, ENCFF968PCC 387560401 ENCODE Processing Pipeline c2d7c79d93db097ec882e503546b3477 https://www.encodeproject.org/files/ENCFF822LFM/@@download/ENCFF822LFM.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF004ICV bigWig signal p-value ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 ENCFF070PRN, ENCFF582CVJ 431210071 ENCODE Processing Pipeline 06eec5d498324c89a0bc883cf1d52a13 https://www.encodeproject.org/files/ENCFF004ICV/@@download/ENCFF004ICV.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF927SRG bigWig fold change over control ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 ENCFF070PRN, ENCFF582CVJ 395594162 ENCODE Processing Pipeline 6b1d2d55e87f39eb531f19c3f2df43b1 https://www.encodeproject.org/files/ENCFF927SRG/@@download/ENCFF927SRG.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF213SAP bigWig signal p-value ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 ENCFF582CVJ, ENCFF681OPS 422412602 ENCODE Processing Pipeline 6fbb28309e39bede4b015f9ca29f39bf https://www.encodeproject.org/files/ENCFF213SAP/@@download/ENCFF213SAP.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF484TMW bigWig signal p-value ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF070PRN, ENCFF582CVJ, ENCFF681OPS 420652065 ENCODE Processing Pipeline d1e964e6bb27324dc7e6925c21dfcc9c https://www.encodeproject.org/files/ENCFF484TMW/@@download/ENCFF484TMW.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF637CGN bigWig fold change over control ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 ENCFF582CVJ, ENCFF681OPS 373583613 ENCODE Processing Pipeline f6693a4a753858c6145866f84350a9ef https://www.encodeproject.org/files/ENCFF637CGN/@@download/ENCFF637CGN.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF351DSM bigWig fold change over control ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF070PRN, ENCFF582CVJ, ENCFF681OPS 657210865 ENCODE Processing Pipeline c4e1947dad862304da5e85825f7de0cc https://www.encodeproject.org/files/ENCFF351DSM/@@download/ENCFF351DSM.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF204MYY bed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF070PRN, ENCFF582CVJ, ENCFF681OPS 6411772 ENCODE Processing Pipeline 4d57fb10aa9ab987ac45bf54954bf2bb https://www.encodeproject.org/files/ENCFF204MYY/@@download/ENCFF204MYY.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF096AID bed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 ENCFF070PRN, ENCFF582CVJ 5615990 ENCODE Processing Pipeline 8c2a740963c0a4f193f697c20c649e79 https://www.encodeproject.org/files/ENCFF096AID/@@download/ENCFF096AID.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF151CLB bed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 ENCFF582CVJ, ENCFF681OPS 5691677 ENCODE Processing Pipeline a630f38b1598cbe53f4963b6b705a02d https://www.encodeproject.org/files/ENCFF151CLB/@@download/ENCFF151CLB.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF441LTY bigBed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1 ENCFF096AID 13099425 ENCODE Processing Pipeline 0f71dc8e33430ac7da80bf99ac7d305f https://www.encodeproject.org/files/ENCFF441LTY/@@download/ENCFF441LTY.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF292IBW bigBed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 2 ENCFF151CLB 13083872 ENCODE Processing Pipeline d4cc22fc434067240fd61f8bc47b893a https://www.encodeproject.org/files/ENCFF292IBW/@@download/ENCFF292IBW.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF753AKA bigBed narrowPeak peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF204MYY 13146994 ENCODE Processing Pipeline 9c0d2cde69d0a88403d82b6568f40131 https://www.encodeproject.org/files/ENCFF753AKA/@@download/ENCFF753AKA.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF697PEL bigBed narrowPeak conservative idr thresholded peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF497ZJO 425668 ENCODE Processing Pipeline ac29b097f985e12d9765883ba59129eb https://www.encodeproject.org/files/ENCFF697PEL/@@download/ENCFF697PEL.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF186YGH bed narrowPeak optimal idr thresholded peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF096AID, ENCFF151CLB, ENCFF204MYY, ENCFF419RSJ 190509 ENCODE Processing Pipeline b719ba9f0e996a9443156098eac0f01d https://www.encodeproject.org/files/ENCFF186YGH/@@download/ENCFF186YGH.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF497ZJO bed narrowPeak conservative idr thresholded peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF096AID, ENCFF151CLB, ENCFF204MYY, ENCFF419RSJ 188590 ENCODE Processing Pipeline 0882c669c9391d5a20e79e69df12bc04 https://www.encodeproject.org/files/ENCFF497ZJO/@@download/ENCFF497ZJO.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF985QWD bigBed narrowPeak optimal idr thresholded peaks ENCSR156CWW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DNMT3B-human ENCAB697XQW DNA False 2016-09-26 ENCODE 1, 2 ENCFF186YGH 430079 ENCODE Processing Pipeline 23dfd8550013dc3518f499da07ec0ba0 https://www.encodeproject.org/files/ENCFF985QWD/@@download/ENCFF985QWD.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF844LMK fastq reads ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 1 50 single-ended 1161609936 Richard Myers, HAIB e967b2e760c7478a53f27afa838b6342 SRA:SRR5331523 https://www.encodeproject.org/files/ENCFF844LMK/@@download/ENCFF844LMK.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption ENCFF617BUV fastq reads ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 1 50 single-ended 1169964687 Richard Myers, HAIB 0d8a8ec19594ee5364a499629604625f SRA:SRR5331524 https://www.encodeproject.org/files/ENCFF617BUV/@@download/ENCFF617BUV.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption ENCFF559XKV bam unfiltered alignments ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 50 ENCFF617BUV, ENCFF807MUK 1296223971 ENCODE Processing Pipeline 9bea60b1cdf573f4e10b19236db567b9 https://www.encodeproject.org/files/ENCFF559XKV/@@download/ENCFF559XKV.bam hg19 released control low read depth, antibody characterized with exemption ENCFF279IGS bam unfiltered alignments ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 50 ENCFF617BUV, ENCFF643CGH 1301423410 ENCODE Processing Pipeline f794f4e8966b8ebaad800f78d84b1f2c https://www.encodeproject.org/files/ENCFF279IGS/@@download/ENCFF279IGS.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF077FJW bam unfiltered alignments ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 50 ENCFF807MUK, ENCFF844LMK 1275808367 ENCODE Processing Pipeline 9058b351f275d8a9dfffa45d2040ed6b https://www.encodeproject.org/files/ENCFF077FJW/@@download/ENCFF077FJW.bam hg19 released control low read depth, antibody characterized with exemption ENCFF847VNA bam unfiltered alignments ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 50 ENCFF643CGH, ENCFF844LMK 1280534799 ENCODE Processing Pipeline cafcbfbb004b30bd26853c2a27dadbac https://www.encodeproject.org/files/ENCFF847VNA/@@download/ENCFF847VNA.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF643YHU bam alignments ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 50 ENCFF617BUV, ENCFF807MUK 979293603 ENCODE Processing Pipeline 6fd0088fc1d797eee9b05da33704130d https://www.encodeproject.org/files/ENCFF643YHU/@@download/ENCFF643YHU.bam hg19 released control low read depth, antibody characterized with exemption ENCFF445RPP bam alignments ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 50 ENCFF643CGH, ENCFF844LMK 954650286 ENCODE Processing Pipeline 6e7917a03c5470d6ac537f963d637fa8 https://www.encodeproject.org/files/ENCFF445RPP/@@download/ENCFF445RPP.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF924APX bam alignments ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 50 ENCFF807MUK, ENCFF844LMK 954864000 ENCODE Processing Pipeline f1d91a60ca91d02f09fab505a67e1fc1 https://www.encodeproject.org/files/ENCFF924APX/@@download/ENCFF924APX.bam hg19 released control low read depth, antibody characterized with exemption ENCFF655ZAY bam alignments ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 50 ENCFF617BUV, ENCFF643CGH 979178133 ENCODE Processing Pipeline a77a7c905e2d93aea726dfc75ebf5c32 https://www.encodeproject.org/files/ENCFF655ZAY/@@download/ENCFF655ZAY.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF647OLL bigWig signal p-value ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 ENCFF445RPP, ENCFF582CVJ 445209185 ENCODE Processing Pipeline eed895045d5e428190d6cde084f2e317 https://www.encodeproject.org/files/ENCFF647OLL/@@download/ENCFF647OLL.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF366UUA bigWig fold change over control ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 ENCFF582CVJ, ENCFF655ZAY 418907397 ENCODE Processing Pipeline facaff47a38b1591cee2e93bdfe2b707 https://www.encodeproject.org/files/ENCFF366UUA/@@download/ENCFF366UUA.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF328BZE bigWig signal p-value ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF445RPP, ENCFF582CVJ, ENCFF655ZAY 446053388 ENCODE Processing Pipeline 197ba15d866d5ab745a7d65fa2fa04f3 https://www.encodeproject.org/files/ENCFF328BZE/@@download/ENCFF328BZE.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF902HHU bigWig signal p-value ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 ENCFF582CVJ, ENCFF655ZAY 451003145 ENCODE Processing Pipeline d988eae540f65c5ffd40e247db8eee4e https://www.encodeproject.org/files/ENCFF902HHU/@@download/ENCFF902HHU.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF902HFT bigWig fold change over control ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 ENCFF445RPP, ENCFF582CVJ 404245005 ENCODE Processing Pipeline 5142fce9e208b3f27f53c2f24f9bd297 https://www.encodeproject.org/files/ENCFF902HFT/@@download/ENCFF902HFT.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF647SZE bed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 ENCFF445RPP, ENCFF582CVJ 5883329 ENCODE Processing Pipeline 6875934bd2177a77d5a48872f4e40f51 https://www.encodeproject.org/files/ENCFF647SZE/@@download/ENCFF647SZE.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF604LLC bigBed narrowPeak optimal idr thresholded peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF960FKQ 588638 ENCODE Processing Pipeline fe812b18f88afb0fbacb45164bee8990 https://www.encodeproject.org/files/ENCFF604LLC/@@download/ENCFF604LLC.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF490YHP bigWig fold change over control ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF445RPP, ENCFF582CVJ, ENCFF655ZAY 710447731 ENCODE Processing Pipeline b19c23bf0cce7a8fa8e71949590f6a39 https://www.encodeproject.org/files/ENCFF490YHP/@@download/ENCFF490YHP.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF535GRR bed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF445RPP, ENCFF582CVJ, ENCFF655ZAY 6626314 ENCODE Processing Pipeline 9173a1f39ba8530041b5f5474228e9fc https://www.encodeproject.org/files/ENCFF535GRR/@@download/ENCFF535GRR.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF240KQW bigBed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF535GRR 12989056 ENCODE Processing Pipeline ddfecf2e69b25afadf68ad0d299758e6 https://www.encodeproject.org/files/ENCFF240KQW/@@download/ENCFF240KQW.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF924ZVH bed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 ENCFF582CVJ, ENCFF655ZAY 5621501 ENCODE Processing Pipeline 20168d352852c9c7bd775530cad9916f https://www.encodeproject.org/files/ENCFF924ZVH/@@download/ENCFF924ZVH.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF960FKQ bed narrowPeak optimal idr thresholded peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF535GRR, ENCFF647SZE, ENCFF924ZVH 286941 ENCODE Processing Pipeline f628951dfed81605d2a8419a751b9496 https://www.encodeproject.org/files/ENCFF960FKQ/@@download/ENCFF960FKQ.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF601HPL bigBed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 ENCFF924ZVH 13020014 ENCODE Processing Pipeline 3214c6fa23dfca1bf2dc5c09e217dce6 https://www.encodeproject.org/files/ENCFF601HPL/@@download/ENCFF601HPL.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF768NTZ bigBed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 ENCFF647SZE 12963425 ENCODE Processing Pipeline 14760ab67cc3ea422dc4c8d3dde80b4b https://www.encodeproject.org/files/ENCFF768NTZ/@@download/ENCFF768NTZ.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF427ZHX bigBed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF656YTE 12959631 ENCODE Processing Pipeline 86bac541133422f63dc6a5df3568f5c5 https://www.encodeproject.org/files/ENCFF427ZHX/@@download/ENCFF427ZHX.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF423YCB bigWig fold change over control ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 ENCFF023YTY, ENCFF924APX 409613266 ENCODE Processing Pipeline 0a687f9a74ddd2080a311e0039329203 https://www.encodeproject.org/files/ENCFF423YCB/@@download/ENCFF423YCB.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF010ZCB bigWig fold change over control ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF023YTY, ENCFF643YHU, ENCFF924APX 708524030 ENCODE Processing Pipeline c1228682c303c09f5881727d3c6d98f7 https://www.encodeproject.org/files/ENCFF010ZCB/@@download/ENCFF010ZCB.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF404HWH bed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 ENCFF023YTY, ENCFF643YHU 5631730 ENCODE Processing Pipeline 14aabb19bc4822c0a595ac1225ac6680 https://www.encodeproject.org/files/ENCFF404HWH/@@download/ENCFF404HWH.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF656YTE bed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF023YTY, ENCFF643YHU, ENCFF924APX 6659970 ENCODE Processing Pipeline 04d1dd85a68c17fedbb5b2664c025f56 https://www.encodeproject.org/files/ENCFF656YTE/@@download/ENCFF656YTE.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF837RNN bigBed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 ENCFF020KDS 12967741 ENCODE Processing Pipeline 48ee2926f57588075894cfad43935975 https://www.encodeproject.org/files/ENCFF837RNN/@@download/ENCFF837RNN.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF363VZN bigWig signal p-value ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 ENCFF023YTY, ENCFF924APX 447933599 ENCODE Processing Pipeline b79dc29a81ca61988b1258dc98929580 https://www.encodeproject.org/files/ENCFF363VZN/@@download/ENCFF363VZN.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF577AYR bigWig fold change over control ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 ENCFF023YTY, ENCFF643YHU 405379388 ENCODE Processing Pipeline a377c5407f0b9da6063bdb6420dd9307 https://www.encodeproject.org/files/ENCFF577AYR/@@download/ENCFF577AYR.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF554DCT bigWig signal p-value ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 ENCFF023YTY, ENCFF643YHU 444670440 ENCODE Processing Pipeline cbbc72b578a3ff5381afbacba34f77b6 https://www.encodeproject.org/files/ENCFF554DCT/@@download/ENCFF554DCT.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF581DAA bigWig signal p-value ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF023YTY, ENCFF643YHU, ENCFF924APX 446026715 ENCODE Processing Pipeline f2861d1d2df4aef0ce4bbbf7c7b2fbb5 https://www.encodeproject.org/files/ENCFF581DAA/@@download/ENCFF581DAA.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF020KDS bed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 2 ENCFF023YTY, ENCFF924APX 5933196 ENCODE Processing Pipeline 1d1443d84b49277161cee74feac704b4 https://www.encodeproject.org/files/ENCFF020KDS/@@download/ENCFF020KDS.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF023DPP bigBed narrowPeak peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1 ENCFF404HWH 13018670 ENCODE Processing Pipeline 421c304112f2bb415bd5a69526fb0505 https://www.encodeproject.org/files/ENCFF023DPP/@@download/ENCFF023DPP.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF801SSE bed narrowPeak optimal idr thresholded peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF020KDS, ENCFF404HWH, ENCFF656YTE 277247 ENCODE Processing Pipeline 92c927c79f7dc604fbc837c438ff2454 https://www.encodeproject.org/files/ENCFF801SSE/@@download/ENCFF801SSE.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF167TBW bigBed narrowPeak optimal idr thresholded peaks ENCSR260UJI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-09-28 ENCODE 1, 2 ENCFF801SSE 571972 ENCODE Processing Pipeline 75c97252042dee5a1aeaa3c0eb48fd7f https://www.encodeproject.org/files/ENCFF167TBW/@@download/ENCFF167TBW.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF379UBY fastq reads ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2917825950 Richard Myers, HAIB 3b570c5843ed70c839182442b101319a SRA:SRR5339174 https://www.encodeproject.org/files/ENCFF379UBY/@@download/ENCFF379UBY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF885OGQ fastq reads ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1971996328 Richard Myers, HAIB d600bfeab2de185dbd5b5487fe7e45a8 SRA:SRR5339173 https://www.encodeproject.org/files/ENCFF885OGQ/@@download/ENCFF885OGQ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF342MDN bam unfiltered alignments ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF885OGQ 2220012550 ENCODE Processing Pipeline 1e8976a6e3f0f1f81f095c4fc2f2551c https://www.encodeproject.org/files/ENCFF342MDN/@@download/ENCFF342MDN.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF874IZI bam unfiltered alignments ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF885OGQ 2216099529 ENCODE Processing Pipeline 2991a7bfb3626900d87bdcc88f7ab281 https://www.encodeproject.org/files/ENCFF874IZI/@@download/ENCFF874IZI.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF230NIW bam unfiltered alignments ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF379UBY, ENCFF643CGH 3198142280 ENCODE Processing Pipeline e6fca1e6e98d4389ebef037feba3c289 https://www.encodeproject.org/files/ENCFF230NIW/@@download/ENCFF230NIW.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF652UUS bam unfiltered alignments ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF379UBY, ENCFF807MUK 3190492892 ENCODE Processing Pipeline 3535274a82235ca577479ad4d8e53b7e https://www.encodeproject.org/files/ENCFF652UUS/@@download/ENCFF652UUS.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF103BEQ bam alignments ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF885OGQ 1641550297 ENCODE Processing Pipeline d1c4acf45184797165174cf87261a677 https://www.encodeproject.org/files/ENCFF103BEQ/@@download/ENCFF103BEQ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF855QOS bam alignments ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF885OGQ 1640884151 ENCODE Processing Pipeline 5bd3a38f947cb62d7447c22f77f6df59 https://www.encodeproject.org/files/ENCFF855QOS/@@download/ENCFF855QOS.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF428OAR bam alignments ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF379UBY, ENCFF643CGH 2011926108 ENCODE Processing Pipeline 660f70c5d7f7f339d5866a4b39efeb91 https://www.encodeproject.org/files/ENCFF428OAR/@@download/ENCFF428OAR.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF988EJM bam alignments ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF379UBY, ENCFF807MUK 2010893336 ENCODE Processing Pipeline 6c0c448d3f1590d08a113f73d03080f0 https://www.encodeproject.org/files/ENCFF988EJM/@@download/ENCFF988EJM.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF785MWI bigWig signal p-value ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF428OAR 704380807 ENCODE Processing Pipeline 5be07dc3747ffd6292b95d6d9c08b12e https://www.encodeproject.org/files/ENCFF785MWI/@@download/ENCFF785MWI.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF117ROR bigWig signal p-value ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF103BEQ 629085570 ENCODE Processing Pipeline 9cf5fa04280a83eadec434f3656784f4 https://www.encodeproject.org/files/ENCFF117ROR/@@download/ENCFF117ROR.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF331YYT bigWig signal p-value ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF103BEQ, ENCFF428OAR 655711288 ENCODE Processing Pipeline 18d53587dc0842932f0cbfe9ada60637 https://www.encodeproject.org/files/ENCFF331YYT/@@download/ENCFF331YYT.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF220MOM bigWig fold change over control ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF428OAR 753068597 ENCODE Processing Pipeline 4e69975d69592b8e6ac30692ac73492f https://www.encodeproject.org/files/ENCFF220MOM/@@download/ENCFF220MOM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF243MDF bigWig fold change over control ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF103BEQ 610503807 ENCODE Processing Pipeline fa2f9e15f0e12e2ede0cbdfc084db9b8 https://www.encodeproject.org/files/ENCFF243MDF/@@download/ENCFF243MDF.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF018PYH bigWig fold change over control ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF103BEQ, ENCFF428OAR 1089026782 ENCODE Processing Pipeline 42ae5a58c16a2ac3b591f7c3b1a437c3 https://www.encodeproject.org/files/ENCFF018PYH/@@download/ENCFF018PYH.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF074AAK bed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF428OAR 6949734 ENCODE Processing Pipeline 9a9cc1c1b0f25d0cabc2f25fc95f4606 https://www.encodeproject.org/files/ENCFF074AAK/@@download/ENCFF074AAK.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF508GKC bed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF103BEQ 6953007 ENCODE Processing Pipeline 60973e322cd5b5512060ee4fc99ecdf2 https://www.encodeproject.org/files/ENCFF508GKC/@@download/ENCFF508GKC.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF662LNB bigBed narrowPeak conservative idr thresholded peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF848JMT 1415223 ENCODE Processing Pipeline 47b9c9caead6bab6b6b1be66bce69606 https://www.encodeproject.org/files/ENCFF662LNB/@@download/ENCFF662LNB.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF734SES bed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF103BEQ, ENCFF428OAR 7166425 ENCODE Processing Pipeline 813e1d81f8aec0d2cd0628e7e8fa2961 https://www.encodeproject.org/files/ENCFF734SES/@@download/ENCFF734SES.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF239UFH bigBed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF074AAK 12403851 ENCODE Processing Pipeline 281a8cff5205fd4b16147b6b1836eb25 https://www.encodeproject.org/files/ENCFF239UFH/@@download/ENCFF239UFH.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF555VNX bigBed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF508GKC 12695244 ENCODE Processing Pipeline 8713bb87294c5beaac794416e0ca54b7 https://www.encodeproject.org/files/ENCFF555VNX/@@download/ENCFF555VNX.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF099NQY bigBed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF734SES 12457085 ENCODE Processing Pipeline 1a831350deaef7296f307b63818de3af https://www.encodeproject.org/files/ENCFF099NQY/@@download/ENCFF099NQY.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF848JMT bed narrowPeak conservative idr thresholded peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF074AAK, ENCFF419RSJ, ENCFF508GKC, ENCFF734SES 677883 ENCODE Processing Pipeline f771948fc981d0665238d7e569ac3ed2 https://www.encodeproject.org/files/ENCFF848JMT/@@download/ENCFF848JMT.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF085KWU bed narrowPeak optimal idr thresholded peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF074AAK, ENCFF419RSJ, ENCFF508GKC, ENCFF734SES 761945 ENCODE Processing Pipeline 7496d8c9446bd806f7770552cc3140e6 https://www.encodeproject.org/files/ENCFF085KWU/@@download/ENCFF085KWU.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF660DRM bigBed narrowPeak optimal idr thresholded peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF085KWU 1554606 ENCODE Processing Pipeline df1168c26f95c34b934e3c96f890248e https://www.encodeproject.org/files/ENCFF660DRM/@@download/ENCFF660DRM.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF249DFU bigWig signal p-value ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF988EJM 1189777894 ENCODE Processing Pipeline 0a7e2314c0327cb9798fe791b3ffec8e https://www.encodeproject.org/files/ENCFF249DFU/@@download/ENCFF249DFU.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF786PYC bigWig signal p-value ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF855QOS 1330091554 ENCODE Processing Pipeline 8755df939ef8a4156c177bf290708f11 https://www.encodeproject.org/files/ENCFF786PYC/@@download/ENCFF786PYC.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF685WBN bigWig signal p-value ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF855QOS, ENCFF988EJM 1441645827 ENCODE Processing Pipeline af4b64c1a61e35b667a6cf2b493db527 https://www.encodeproject.org/files/ENCFF685WBN/@@download/ENCFF685WBN.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF055YJP bigWig fold change over control ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF988EJM 1330948663 ENCODE Processing Pipeline fc0f8203869c9e898ce04e28926df364 https://www.encodeproject.org/files/ENCFF055YJP/@@download/ENCFF055YJP.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF364LDS bigWig fold change over control ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF855QOS 1176930399 ENCODE Processing Pipeline b4260e818f37b6902e8a1faf0b869c74 https://www.encodeproject.org/files/ENCFF364LDS/@@download/ENCFF364LDS.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF423DKP bigWig fold change over control ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF855QOS, ENCFF988EJM 1807354567 ENCODE Processing Pipeline f0aeafe1fcdc4f2d03dacd5018b203a3 https://www.encodeproject.org/files/ENCFF423DKP/@@download/ENCFF423DKP.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF495SZK bed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF988EJM 7106587 ENCODE Processing Pipeline 90983671da0212dcd841eebfa680e2c7 https://www.encodeproject.org/files/ENCFF495SZK/@@download/ENCFF495SZK.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF977RZR bed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF855QOS 7094454 ENCODE Processing Pipeline 68435eded05bd8b19828ee8e842ff060 https://www.encodeproject.org/files/ENCFF977RZR/@@download/ENCFF977RZR.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF834NKY bed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF855QOS, ENCFF988EJM 7107657 ENCODE Processing Pipeline f71ebf13b77374616b3a156e5e86d8e4 https://www.encodeproject.org/files/ENCFF834NKY/@@download/ENCFF834NKY.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF639ORV bigBed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF495SZK 12384439 ENCODE Processing Pipeline 8009965339e2fec962e3376952ab72d8 https://www.encodeproject.org/files/ENCFF639ORV/@@download/ENCFF639ORV.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF792HVS bigBed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF977RZR 12586465 ENCODE Processing Pipeline b92568fce2c0a442d107e904b279b3ed https://www.encodeproject.org/files/ENCFF792HVS/@@download/ENCFF792HVS.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF912HME bigBed narrowPeak peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF834NKY 12341600 ENCODE Processing Pipeline 16c0cf141c81681a44898ca075652920 https://www.encodeproject.org/files/ENCFF912HME/@@download/ENCFF912HME.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF497AJW bed narrowPeak conservative idr thresholded peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF495SZK, ENCFF834NKY, ENCFF977RZR 710995 ENCODE Processing Pipeline 90209742bd3135cfd65fca1f1f9e14af https://www.encodeproject.org/files/ENCFF497AJW/@@download/ENCFF497AJW.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF864FWG bigBed narrowPeak conservative idr thresholded peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF497AJW 1540114 ENCODE Processing Pipeline 6504ca037e1f923debcb8475fa4f4848 https://www.encodeproject.org/files/ENCFF864FWG/@@download/ENCFF864FWG.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF540CNJ bed narrowPeak optimal idr thresholded peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF495SZK, ENCFF834NKY, ENCFF977RZR 793976 ENCODE Processing Pipeline d9dc664bcc205c78313cb5ec41b987ac https://www.encodeproject.org/files/ENCFF540CNJ/@@download/ENCFF540CNJ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF386FPJ bigBed narrowPeak optimal idr thresholded peaks ENCSR704IGU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZGPAT-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF540CNJ 1679142 ENCODE Processing Pipeline 35c98d240b1de50b70b4b401fd8080e4 https://www.encodeproject.org/files/ENCFF386FPJ/@@download/ENCFF386FPJ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF720DMM fastq reads ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1023383318 Richard Myers, HAIB fb462ad272c7b762f2d9efb513e4da12 SRA:SRR5331360 https://www.encodeproject.org/files/ENCFF720DMM/@@download/ENCFF720DMM.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF099NTW fastq reads ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1573727489 Richard Myers, HAIB d97fe1fb6134cf59c65cab8e7904a091 SRA:SRR5331361 https://www.encodeproject.org/files/ENCFF099NTW/@@download/ENCFF099NTW.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF479TTQ bam unfiltered alignments ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF720DMM, ENCFF807MUK 1235759112 ENCODE Processing Pipeline 4a576de6fd6bc7283a0bfd4615806fd6 https://www.encodeproject.org/files/ENCFF479TTQ/@@download/ENCFF479TTQ.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF794CFE bam unfiltered alignments ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF720DMM 1238623232 ENCODE Processing Pipeline aa3470ea2053eddfba8ac1dbeb026aa4 https://www.encodeproject.org/files/ENCFF794CFE/@@download/ENCFF794CFE.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF003LPH bam unfiltered alignments ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF099NTW, ENCFF807MUK 1803926108 ENCODE Processing Pipeline 0c5e3404efe1fdc96092bfeed0484466 https://www.encodeproject.org/files/ENCFF003LPH/@@download/ENCFF003LPH.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF880CKR bam unfiltered alignments ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF099NTW, ENCFF643CGH 1806710517 ENCODE Processing Pipeline d58d4792632ef84ee826d9495369edfa https://www.encodeproject.org/files/ENCFF880CKR/@@download/ENCFF880CKR.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF967IZV bam alignments ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF720DMM, ENCFF807MUK 965887552 ENCODE Processing Pipeline c36aa8e9a1b3bced61e3fea6fcaee748 https://www.encodeproject.org/files/ENCFF967IZV/@@download/ENCFF967IZV.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF753MGD bam alignments ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF720DMM 966382220 ENCODE Processing Pipeline bc7caec21b623db61ec3a7189965b476 https://www.encodeproject.org/files/ENCFF753MGD/@@download/ENCFF753MGD.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF531SFF bam alignments ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF099NTW, ENCFF643CGH 1399392666 ENCODE Processing Pipeline 58cab34339e20cd3b9349999ea9c02a4 https://www.encodeproject.org/files/ENCFF531SFF/@@download/ENCFF531SFF.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF787PIX bam alignments ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF099NTW, ENCFF807MUK 1398977159 ENCODE Processing Pipeline 2fbfda063d4add327cb892ac64907738 https://www.encodeproject.org/files/ENCFF787PIX/@@download/ENCFF787PIX.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF737WKD bigWig signal p-value ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF753MGD 492119432 ENCODE Processing Pipeline 2707ce2ddb13fc5733d09aa871aecd4b https://www.encodeproject.org/files/ENCFF737WKD/@@download/ENCFF737WKD.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF572SOY bigWig signal p-value ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF531SFF, ENCFF753MGD 657383367 ENCODE Processing Pipeline 96976c1163d313c9c07c2cdcd341cc1d https://www.encodeproject.org/files/ENCFF572SOY/@@download/ENCFF572SOY.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF501MQB bigWig signal p-value ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF531SFF 598511343 ENCODE Processing Pipeline 1740ed3e70190dc4707efcd425106e3c https://www.encodeproject.org/files/ENCFF501MQB/@@download/ENCFF501MQB.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF738GDC bigWig fold change over control ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF753MGD 392487694 ENCODE Processing Pipeline 77b987a455ec46a410729bb4f0b4a811 https://www.encodeproject.org/files/ENCFF738GDC/@@download/ENCFF738GDC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF617KRI bigWig fold change over control ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF531SFF 546722500 ENCODE Processing Pipeline 450915e68a4bdbb586c3cf0cefe2026b https://www.encodeproject.org/files/ENCFF617KRI/@@download/ENCFF617KRI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF856NOM bigWig fold change over control ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF531SFF, ENCFF753MGD 800712103 ENCODE Processing Pipeline f9d4b832fdfd8e888c7c4c8fc9a05d11 https://www.encodeproject.org/files/ENCFF856NOM/@@download/ENCFF856NOM.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF165JRJ bed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF531SFF, ENCFF753MGD 7032244 ENCODE Processing Pipeline 388a159f35987eebc5c1469608393c45 https://www.encodeproject.org/files/ENCFF165JRJ/@@download/ENCFF165JRJ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF937OOK bed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF531SFF 6798882 ENCODE Processing Pipeline de7e28d5a1ef4c3ece7ba3d57322af26 https://www.encodeproject.org/files/ENCFF937OOK/@@download/ENCFF937OOK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF174LTL bigBed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF937OOK 12564604 ENCODE Processing Pipeline 10d24fabe8206d78c4a15903bdda5b03 https://www.encodeproject.org/files/ENCFF174LTL/@@download/ENCFF174LTL.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF386PVB bed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF753MGD 5825469 ENCODE Processing Pipeline 6a0e532a30513e3d657c7453dd8d002d https://www.encodeproject.org/files/ENCFF386PVB/@@download/ENCFF386PVB.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF591BFJ bigBed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF386PVB 13092000 ENCODE Processing Pipeline 1d4924169605d36da990920b5fe2ceea https://www.encodeproject.org/files/ENCFF591BFJ/@@download/ENCFF591BFJ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF842LKY bed narrowPeak conservative idr thresholded peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF165JRJ, ENCFF386PVB, ENCFF419RSJ, ENCFF937OOK 313151 ENCODE Processing Pipeline 83ceb1fa92bd48f03a7cd3c2a72cc697 https://www.encodeproject.org/files/ENCFF842LKY/@@download/ENCFF842LKY.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF420NTD bigBed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF165JRJ 12681144 ENCODE Processing Pipeline 5f68bd1327336686e7069985d199bd9f https://www.encodeproject.org/files/ENCFF420NTD/@@download/ENCFF420NTD.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF782UVH bigBed narrowPeak conservative idr thresholded peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF842LKY 635926 ENCODE Processing Pipeline ceabbef90cab3b612fa42f57efc22071 https://www.encodeproject.org/files/ENCFF782UVH/@@download/ENCFF782UVH.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF020HIP bigBed narrowPeak optimal idr thresholded peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF293UEL 782570 ENCODE Processing Pipeline 46140bed86eac9e6eac66167210b30c3 https://www.encodeproject.org/files/ENCFF020HIP/@@download/ENCFF020HIP.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF293UEL bed narrowPeak optimal idr thresholded peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF165JRJ, ENCFF386PVB, ENCFF419RSJ, ENCFF937OOK 410954 ENCODE Processing Pipeline 4d1140623b196fdbcba6ab07590937e3 https://www.encodeproject.org/files/ENCFF293UEL/@@download/ENCFF293UEL.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF646YQB bigWig signal p-value ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF967IZV 1113164791 ENCODE Processing Pipeline abdc142fa6e44f9eabf41dc4bd252744 https://www.encodeproject.org/files/ENCFF646YQB/@@download/ENCFF646YQB.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF353NFS bigWig signal p-value ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF787PIX 1176657927 ENCODE Processing Pipeline e44eda097031743049dadbec162a6134 https://www.encodeproject.org/files/ENCFF353NFS/@@download/ENCFF353NFS.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF673RNL bigWig signal p-value ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF787PIX, ENCFF967IZV 1400100485 ENCODE Processing Pipeline c9eb15de6d8389f0fd44903ac5780dec https://www.encodeproject.org/files/ENCFF673RNL/@@download/ENCFF673RNL.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF804WJE bigWig fold change over control ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF967IZV 991223802 ENCODE Processing Pipeline 92de8a10951bf49e1e3c3707b2071ae5 https://www.encodeproject.org/files/ENCFF804WJE/@@download/ENCFF804WJE.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF303MNL bigWig fold change over control ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF787PIX 1007434387 ENCODE Processing Pipeline 51eed68d9c995202fa20848caaa40def https://www.encodeproject.org/files/ENCFF303MNL/@@download/ENCFF303MNL.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF392EGH bigWig fold change over control ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF787PIX, ENCFF967IZV 1378321363 ENCODE Processing Pipeline 5b39af8f76cf87d77d86f03d75987961 https://www.encodeproject.org/files/ENCFF392EGH/@@download/ENCFF392EGH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF254LDX bed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF967IZV 7013563 ENCODE Processing Pipeline 0e58a5c7fbe4d0b92aff2b009ebde20f https://www.encodeproject.org/files/ENCFF254LDX/@@download/ENCFF254LDX.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF186TPL bed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF787PIX, ENCFF967IZV 7063073 ENCODE Processing Pipeline 28dde6260424a7856e05d4a3d18f70e6 https://www.encodeproject.org/files/ENCFF186TPL/@@download/ENCFF186TPL.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF204ZSE bed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF787PIX 6839707 ENCODE Processing Pipeline b5a0136170a4633f73b54ca8cfa23117 https://www.encodeproject.org/files/ENCFF204ZSE/@@download/ENCFF204ZSE.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF262KST bigBed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF254LDX 12623307 ENCODE Processing Pipeline 56e37956a6702b845e8b57c04066ac16 https://www.encodeproject.org/files/ENCFF262KST/@@download/ENCFF262KST.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF885RCP bigBed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF204ZSE 12256662 ENCODE Processing Pipeline f92aefb56bed6233c7364060fa2104c0 https://www.encodeproject.org/files/ENCFF885RCP/@@download/ENCFF885RCP.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF029LIH bigBed narrowPeak peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF186TPL 12532621 ENCODE Processing Pipeline 099995f9a9834dd95e6fc90f2811e608 https://www.encodeproject.org/files/ENCFF029LIH/@@download/ENCFF029LIH.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF035CBR bed narrowPeak conservative idr thresholded peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF186TPL, ENCFF204ZSE, ENCFF254LDX 245744 ENCODE Processing Pipeline 48130b3346e25f446c3375b8557567ea https://www.encodeproject.org/files/ENCFF035CBR/@@download/ENCFF035CBR.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF267SMR bigBed narrowPeak conservative idr thresholded peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF035CBR 568500 ENCODE Processing Pipeline a86446b9221250b2c2ecf378f6e4b748 https://www.encodeproject.org/files/ENCFF267SMR/@@download/ENCFF267SMR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF618UVR bigBed narrowPeak optimal idr thresholded peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF035FOK 788223 ENCODE Processing Pipeline d9f9351e8b31b3301d1279469ba4d429 https://www.encodeproject.org/files/ENCFF618UVR/@@download/ENCFF618UVR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF035FOK bed narrowPeak optimal idr thresholded peaks ENCSR173CTF ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF580-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF186TPL, ENCFF204ZSE, ENCFF254LDX 387506 ENCODE Processing Pipeline 239c79ccbedbef467f24262c682114cd https://www.encodeproject.org/files/ENCFF035FOK/@@download/ENCFF035FOK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF380TFO fastq reads ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2540214411 Richard Myers, HAIB f18bcbd29c677af858e3300340b0db52 SRA:SRR5331637 https://www.encodeproject.org/files/ENCFF380TFO/@@download/ENCFF380TFO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF264ZXH fastq reads ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2196984044 Richard Myers, HAIB 35da080362ec48d140be925ba00643de SRA:SRR5331636 https://www.encodeproject.org/files/ENCFF264ZXH/@@download/ENCFF264ZXH.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF102DQG bam unfiltered alignments ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF264ZXH, ENCFF643CGH 2488163071 ENCODE Processing Pipeline 557d3340f57d02f82566523fb230f950 https://www.encodeproject.org/files/ENCFF102DQG/@@download/ENCFF102DQG.bam GRCh38 released antibody characterized with exemption ENCFF425CBA bam unfiltered alignments ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF380TFO, ENCFF643CGH 2923182793 ENCODE Processing Pipeline 3f0416ea460a379ab96be525795f25ad https://www.encodeproject.org/files/ENCFF425CBA/@@download/ENCFF425CBA.bam GRCh38 released antibody characterized with exemption ENCFF994SGQ bam unfiltered alignments ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF264ZXH, ENCFF807MUK 2483849634 ENCODE Processing Pipeline 7bfdd27f32ef2993baabadb18ff232b3 https://www.encodeproject.org/files/ENCFF994SGQ/@@download/ENCFF994SGQ.bam hg19 released antibody characterized with exemption ENCFF290AKY bam unfiltered alignments ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF380TFO, ENCFF807MUK 2916227602 ENCODE Processing Pipeline 94c656d302122c9acec1d0f2a49f91ef https://www.encodeproject.org/files/ENCFF290AKY/@@download/ENCFF290AKY.bam hg19 released antibody characterized with exemption ENCFF236OFH bam alignments ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF264ZXH, ENCFF643CGH 1785791743 ENCODE Processing Pipeline 26800f547d97e1ff04ea33c505ba5f93 https://www.encodeproject.org/files/ENCFF236OFH/@@download/ENCFF236OFH.bam GRCh38 released antibody characterized with exemption ENCFF237AJA bam alignments ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF264ZXH, ENCFF807MUK 1785274481 ENCODE Processing Pipeline 4dc55f67d92abac8d0ee133e18b8fdd1 https://www.encodeproject.org/files/ENCFF237AJA/@@download/ENCFF237AJA.bam hg19 released antibody characterized with exemption ENCFF749BIB bam alignments ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF380TFO, ENCFF643CGH 2207213443 ENCODE Processing Pipeline 6f0e88429c6a7280a7d3be0ecd024a4b https://www.encodeproject.org/files/ENCFF749BIB/@@download/ENCFF749BIB.bam GRCh38 released antibody characterized with exemption ENCFF836CXT bam alignments ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF380TFO, ENCFF807MUK 2206022316 ENCODE Processing Pipeline c3f768626a4152e7e6d1113a5edb2be6 https://www.encodeproject.org/files/ENCFF836CXT/@@download/ENCFF836CXT.bam hg19 released antibody characterized with exemption ENCFF820QIW bigWig signal p-value ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF749BIB 644701632 ENCODE Processing Pipeline 65df202e7140e121932f485400255478 https://www.encodeproject.org/files/ENCFF820QIW/@@download/ENCFF820QIW.bigWig GRCh38 released antibody characterized with exemption ENCFF302KTT bigWig signal p-value ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF236OFH 625375986 ENCODE Processing Pipeline 2524ae3d9af87445c9105feed7b1ba03 https://www.encodeproject.org/files/ENCFF302KTT/@@download/ENCFF302KTT.bigWig GRCh38 released antibody characterized with exemption ENCFF109CEK bigWig signal p-value ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF236OFH, ENCFF749BIB 623724727 ENCODE Processing Pipeline a59b73cce74ca3694dc17b120b3183b4 https://www.encodeproject.org/files/ENCFF109CEK/@@download/ENCFF109CEK.bigWig GRCh38 released antibody characterized with exemption ENCFF910KZX bigWig fold change over control ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF749BIB 716098547 ENCODE Processing Pipeline 3e4a7a03d651d77912eaecf3307f42ae https://www.encodeproject.org/files/ENCFF910KZX/@@download/ENCFF910KZX.bigWig GRCh38 released antibody characterized with exemption ENCFF345XYN bigWig fold change over control ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF236OFH 612242888 ENCODE Processing Pipeline 120661fe8510eca2df7d7497fddea8a1 https://www.encodeproject.org/files/ENCFF345XYN/@@download/ENCFF345XYN.bigWig GRCh38 released antibody characterized with exemption ENCFF529XBR bigWig fold change over control ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF236OFH, ENCFF749BIB 1093864989 ENCODE Processing Pipeline c2acb6580846de1dd4d83c0f0c4c153f https://www.encodeproject.org/files/ENCFF529XBR/@@download/ENCFF529XBR.bigWig GRCh38 released antibody characterized with exemption ENCFF071HQX bed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF749BIB 6690019 ENCODE Processing Pipeline 6844b04814816b9f91f99b14bef918f3 https://www.encodeproject.org/files/ENCFF071HQX/@@download/ENCFF071HQX.bed.gz GRCh38 released antibody characterized with exemption ENCFF496SIC bed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF236OFH 6844729 ENCODE Processing Pipeline 6cd13527c246d66d22b5a4ad1af1b8d9 https://www.encodeproject.org/files/ENCFF496SIC/@@download/ENCFF496SIC.bed.gz GRCh38 released antibody characterized with exemption ENCFF583QBZ bed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF236OFH, ENCFF749BIB 7158002 ENCODE Processing Pipeline 37828fd4f305d99d17a14ac21f15a9b8 https://www.encodeproject.org/files/ENCFF583QBZ/@@download/ENCFF583QBZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF038FHK bigBed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF071HQX 12946259 ENCODE Processing Pipeline 09db9680dfc9ee24bf6ee6bd75a6e014 https://www.encodeproject.org/files/ENCFF038FHK/@@download/ENCFF038FHK.bigBed GRCh38 released antibody characterized with exemption ENCFF095RRH bigBed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF496SIC 12704949 ENCODE Processing Pipeline 9a3905d259ce76c75a60473ec32a3d80 https://www.encodeproject.org/files/ENCFF095RRH/@@download/ENCFF095RRH.bigBed GRCh38 released antibody characterized with exemption ENCFF906DVM bigBed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF583QBZ 12750470 ENCODE Processing Pipeline 3a7faae186e41e8dd8e65aa7fd200549 https://www.encodeproject.org/files/ENCFF906DVM/@@download/ENCFF906DVM.bigBed GRCh38 released antibody characterized with exemption ENCFF418KCB bed narrowPeak conservative idr thresholded peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF071HQX, ENCFF419RSJ, ENCFF496SIC, ENCFF583QBZ 508977 ENCODE Processing Pipeline cdfb01ff62702fa371e230dc68e96a3a https://www.encodeproject.org/files/ENCFF418KCB/@@download/ENCFF418KCB.bed.gz GRCh38 released antibody characterized with exemption ENCFF344PJS bed narrowPeak optimal idr thresholded peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF071HQX, ENCFF419RSJ, ENCFF496SIC, ENCFF583QBZ 537587 ENCODE Processing Pipeline e4b4a7ad17242b7ff3eb6f37befb8dc1 https://www.encodeproject.org/files/ENCFF344PJS/@@download/ENCFF344PJS.bed.gz GRCh38 released antibody characterized with exemption ENCFF902UYF bigBed narrowPeak conservative idr thresholded peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF418KCB 937912 ENCODE Processing Pipeline 63521369330da03860b8ebcfb852b7d8 https://www.encodeproject.org/files/ENCFF902UYF/@@download/ENCFF902UYF.bigBed GRCh38 released antibody characterized with exemption ENCFF258PTZ bigBed narrowPeak optimal idr thresholded peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF344PJS 1184590 ENCODE Processing Pipeline ef8eedf12cdbb2581399563062ad4a9c https://www.encodeproject.org/files/ENCFF258PTZ/@@download/ENCFF258PTZ.bigBed GRCh38 released antibody characterized with exemption ENCFF564TCE bigWig signal p-value ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF836CXT 1350594418 ENCODE Processing Pipeline 9ad8dd3b6fbc87409bd44e39e8e2728e https://www.encodeproject.org/files/ENCFF564TCE/@@download/ENCFF564TCE.bigWig hg19 released antibody characterized with exemption ENCFF473JTW bigWig signal p-value ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF237AJA 1382922774 ENCODE Processing Pipeline 58b65989c69966f71bdfc163d1e66af6 https://www.encodeproject.org/files/ENCFF473JTW/@@download/ENCFF473JTW.bigWig hg19 released antibody characterized with exemption ENCFF935ROF bigWig signal p-value ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF237AJA, ENCFF836CXT 1646571907 ENCODE Processing Pipeline b2ff37f9e39c819ac96a0e11e029452e https://www.encodeproject.org/files/ENCFF935ROF/@@download/ENCFF935ROF.bigWig hg19 released antibody characterized with exemption ENCFF700WRI bigWig fold change over control ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF836CXT 1311124468 ENCODE Processing Pipeline e7cab7f7b7ae243067063aa76ce521bf https://www.encodeproject.org/files/ENCFF700WRI/@@download/ENCFF700WRI.bigWig hg19 released antibody characterized with exemption ENCFF727AGN bigWig fold change over control ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF237AJA 1175414688 ENCODE Processing Pipeline 866e4a1075512d5bc1926fcf1d1a63f4 https://www.encodeproject.org/files/ENCFF727AGN/@@download/ENCFF727AGN.bigWig hg19 released antibody characterized with exemption ENCFF429LCD bigWig fold change over control ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF237AJA, ENCFF836CXT 1773879569 ENCODE Processing Pipeline 734ad6909ff82ecd0475b03e0a58cab7 https://www.encodeproject.org/files/ENCFF429LCD/@@download/ENCFF429LCD.bigWig hg19 released antibody characterized with exemption ENCFF318GTI bigBed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF141OZE 12986142 ENCODE Processing Pipeline 071c7f83c055e5a143bf03902e5da4ba https://www.encodeproject.org/files/ENCFF318GTI/@@download/ENCFF318GTI.bigBed hg19 released antibody characterized with exemption ENCFF141OZE bed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF836CXT 7128683 ENCODE Processing Pipeline c3049369dc3e072deefb6f67ea51bacc https://www.encodeproject.org/files/ENCFF141OZE/@@download/ENCFF141OZE.bed.gz hg19 released antibody characterized with exemption ENCFF261JCG bed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF237AJA, ENCFF836CXT 7265713 ENCODE Processing Pipeline 7cd6688c366135d81b26f3260734e698 https://www.encodeproject.org/files/ENCFF261JCG/@@download/ENCFF261JCG.bed.gz hg19 released antibody characterized with exemption ENCFF649DTF bed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF237AJA 7159985 ENCODE Processing Pipeline 10c5e7198e03e2408ad159610e2ed94e https://www.encodeproject.org/files/ENCFF649DTF/@@download/ENCFF649DTF.bed.gz hg19 released antibody characterized with exemption ENCFF178HUM bigBed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF649DTF 12815405 ENCODE Processing Pipeline 703b16aaa5fb99e39806c92fa6ea3976 https://www.encodeproject.org/files/ENCFF178HUM/@@download/ENCFF178HUM.bigBed hg19 released antibody characterized with exemption ENCFF683KGR bigBed narrowPeak peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF261JCG 12811072 ENCODE Processing Pipeline bd50360c3b2ebcd31a7a5ac48e716ea9 https://www.encodeproject.org/files/ENCFF683KGR/@@download/ENCFF683KGR.bigBed hg19 released antibody characterized with exemption ENCFF317DRJ bed narrowPeak conservative idr thresholded peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF141OZE, ENCFF261JCG, ENCFF649DTF 553539 ENCODE Processing Pipeline 7d5e6fbde8fe4565c3f4aaa4ccdefa7c https://www.encodeproject.org/files/ENCFF317DRJ/@@download/ENCFF317DRJ.bed.gz hg19 released antibody characterized with exemption ENCFF776BWX bed narrowPeak optimal idr thresholded peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF141OZE, ENCFF261JCG, ENCFF649DTF 560467 ENCODE Processing Pipeline 422806e8b5cdb93aa6017a33d6d92015 https://www.encodeproject.org/files/ENCFF776BWX/@@download/ENCFF776BWX.bed.gz hg19 released antibody characterized with exemption ENCFF439SIR bigBed narrowPeak conservative idr thresholded peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF317DRJ 1305139 ENCODE Processing Pipeline 7d09c7da6ecc5f5e1b3f60b105b35bbf https://www.encodeproject.org/files/ENCFF439SIR/@@download/ENCFF439SIR.bigBed hg19 released antibody characterized with exemption ENCFF381JUX bigBed narrowPeak optimal idr thresholded peaks ENCSR009KLQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF16-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF776BWX 1319744 ENCODE Processing Pipeline 5f02e3f7f09d99447410623475add822 https://www.encodeproject.org/files/ENCFF381JUX/@@download/ENCFF381JUX.bigBed hg19 released antibody characterized with exemption ENCFF174QLC fastq reads ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1325236553 Richard Myers, HAIB d8f2e4094f2774251d0f1f6e747ebe63 SRA:SRR5338940 https://www.encodeproject.org/files/ENCFF174QLC/@@download/ENCFF174QLC.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF256YDZ fastq reads ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2346491369 Richard Myers, HAIB 358bc9c9d6dc38c2168a06ea7dbecfcb SRA:SRR5338939 https://www.encodeproject.org/files/ENCFF256YDZ/@@download/ENCFF256YDZ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF406PEZ bam unfiltered alignments ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF256YDZ, ENCFF643CGH 2641729437 ENCODE Processing Pipeline dfd95c835025fa2d7c98082c1201a494 https://www.encodeproject.org/files/ENCFF406PEZ/@@download/ENCFF406PEZ.bam GRCh38 released antibody characterized with exemption ENCFF885CDH bam unfiltered alignments ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF174QLC, ENCFF643CGH 1571280290 ENCODE Processing Pipeline eb9c301b30fc1a1e06cb6fa547b04651 https://www.encodeproject.org/files/ENCFF885CDH/@@download/ENCFF885CDH.bam GRCh38 released antibody characterized with exemption ENCFF267MKV bam alignments ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF256YDZ, ENCFF643CGH 1953996320 ENCODE Processing Pipeline f8ae6d21b815b0d3139f6a170ad8db10 https://www.encodeproject.org/files/ENCFF267MKV/@@download/ENCFF267MKV.bam GRCh38 released antibody characterized with exemption ENCFF049BHT bam unfiltered alignments ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF174QLC, ENCFF807MUK 1568078525 ENCODE Processing Pipeline 9261c8bc282597afbf571c7325f9efb7 https://www.encodeproject.org/files/ENCFF049BHT/@@download/ENCFF049BHT.bam hg19 released antibody characterized with exemption ENCFF644DWE bam unfiltered alignments ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF256YDZ, ENCFF807MUK 2637445793 ENCODE Processing Pipeline 5ef0c97d1eda8bfec5c6a0a2cb15f32d https://www.encodeproject.org/files/ENCFF644DWE/@@download/ENCFF644DWE.bam hg19 released antibody characterized with exemption ENCFF239UPK bam alignments ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF174QLC, ENCFF807MUK 1201974759 ENCODE Processing Pipeline 004defd28e7def5f545e85845a098377 https://www.encodeproject.org/files/ENCFF239UPK/@@download/ENCFF239UPK.bam hg19 released antibody characterized with exemption ENCFF728BHH bam alignments ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF174QLC, ENCFF643CGH 1202455121 ENCODE Processing Pipeline 5b9d63e6c3fc57213d98c95f38bd82c7 https://www.encodeproject.org/files/ENCFF728BHH/@@download/ENCFF728BHH.bam GRCh38 released antibody characterized with exemption ENCFF953XVS bam alignments ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF256YDZ, ENCFF807MUK 1953334743 ENCODE Processing Pipeline 9923b41f81bf28a2a869eb2b5c669148 https://www.encodeproject.org/files/ENCFF953XVS/@@download/ENCFF953XVS.bam hg19 released antibody characterized with exemption ENCFF519WAO bigWig signal p-value ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF728BHH 467714372 ENCODE Processing Pipeline 236df3c813a9c17b49ada2c1e9c81325 https://www.encodeproject.org/files/ENCFF519WAO/@@download/ENCFF519WAO.bigWig GRCh38 released antibody characterized with exemption ENCFF485CXQ bigWig signal p-value ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF267MKV 674484841 ENCODE Processing Pipeline 5e3e36e4f8179848391aa2fccb1a814f https://www.encodeproject.org/files/ENCFF485CXQ/@@download/ENCFF485CXQ.bigWig GRCh38 released antibody characterized with exemption ENCFF146WAO bigWig signal p-value ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF267MKV, ENCFF728BHH 678702476 ENCODE Processing Pipeline dabedaeed20966d27f9de911028e4058 https://www.encodeproject.org/files/ENCFF146WAO/@@download/ENCFF146WAO.bigWig GRCh38 released antibody characterized with exemption ENCFF561OIV bigWig fold change over control ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF728BHH 460339938 ENCODE Processing Pipeline e010e1fb07b9ebc7a585fc87081bb95b https://www.encodeproject.org/files/ENCFF561OIV/@@download/ENCFF561OIV.bigWig GRCh38 released antibody characterized with exemption ENCFF299OIZ bigWig fold change over control ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF267MKV 686277556 ENCODE Processing Pipeline 2252d3b38acce4e37ad9f4e4c3704d8c https://www.encodeproject.org/files/ENCFF299OIZ/@@download/ENCFF299OIZ.bigWig GRCh38 released antibody characterized with exemption ENCFF697IBR bigWig fold change over control ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF267MKV, ENCFF728BHH 948998685 ENCODE Processing Pipeline 88c48663eae6332da586080db01ab6b5 https://www.encodeproject.org/files/ENCFF697IBR/@@download/ENCFF697IBR.bigWig GRCh38 released antibody characterized with exemption ENCFF103JQF bed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF728BHH 5720115 ENCODE Processing Pipeline 5f5a171572e4d02f1aaabaef5dba4f22 https://www.encodeproject.org/files/ENCFF103JQF/@@download/ENCFF103JQF.bed.gz GRCh38 released antibody characterized with exemption ENCFF545VLB bed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF267MKV 6486761 ENCODE Processing Pipeline 9f8df56cd41a55d69c97be73e2dc5fe1 https://www.encodeproject.org/files/ENCFF545VLB/@@download/ENCFF545VLB.bed.gz GRCh38 released antibody characterized with exemption ENCFF166XNP bed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF267MKV, ENCFF728BHH 6752006 ENCODE Processing Pipeline ebfcbf0512d7674c4fe0d7dcc3c06d0a https://www.encodeproject.org/files/ENCFF166XNP/@@download/ENCFF166XNP.bed.gz GRCh38 released antibody characterized with exemption ENCFF540QOS bigBed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF103JQF 13036485 ENCODE Processing Pipeline 0477510f3f11b976bce5227f5c6cec10 https://www.encodeproject.org/files/ENCFF540QOS/@@download/ENCFF540QOS.bigBed GRCh38 released antibody characterized with exemption ENCFF864PNC bigBed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF545VLB 13034304 ENCODE Processing Pipeline 88feb0b4a4e2893cc9e0c6fc27e4306f https://www.encodeproject.org/files/ENCFF864PNC/@@download/ENCFF864PNC.bigBed GRCh38 released antibody characterized with exemption ENCFF024NIL bed narrowPeak conservative idr thresholded peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF103JQF, ENCFF166XNP, ENCFF419RSJ, ENCFF545VLB 595775 ENCODE Processing Pipeline b81f74043381c917aba219cf066feae6 https://www.encodeproject.org/files/ENCFF024NIL/@@download/ENCFF024NIL.bed.gz GRCh38 released antibody characterized with exemption ENCFF941SQA bigBed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF166XNP 12929887 ENCODE Processing Pipeline b3cdb19b9fa20d3562c1f3659ddb67a1 https://www.encodeproject.org/files/ENCFF941SQA/@@download/ENCFF941SQA.bigBed GRCh38 released antibody characterized with exemption ENCFF638RFS bigBed narrowPeak conservative idr thresholded peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF024NIL 1142073 ENCODE Processing Pipeline f7d2cbe39201a1ad41a001400be8fddb https://www.encodeproject.org/files/ENCFF638RFS/@@download/ENCFF638RFS.bigBed GRCh38 released antibody characterized with exemption ENCFF096AKJ bigBed narrowPeak optimal idr thresholded peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF499COS 1279925 ENCODE Processing Pipeline 4fa8bda310a72db9c8548f10e140be27 https://www.encodeproject.org/files/ENCFF096AKJ/@@download/ENCFF096AKJ.bigBed GRCh38 released antibody characterized with exemption ENCFF499COS bed narrowPeak optimal idr thresholded peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF103JQF, ENCFF166XNP, ENCFF419RSJ, ENCFF545VLB 690676 ENCODE Processing Pipeline 6b480f0dc3dc535d170d81e295f2519c https://www.encodeproject.org/files/ENCFF499COS/@@download/ENCFF499COS.bed.gz GRCh38 released antibody characterized with exemption ENCFF370UZS bigWig signal p-value ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF953XVS 1497784584 ENCODE Processing Pipeline b75258a32b87bc1f899a2cf4ebcb02ed https://www.encodeproject.org/files/ENCFF370UZS/@@download/ENCFF370UZS.bigWig hg19 released antibody characterized with exemption ENCFF741HKA bigWig signal p-value ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF239UPK 1313800268 ENCODE Processing Pipeline d16a4f8d773fa51b22ed6b6c95e8378c https://www.encodeproject.org/files/ENCFF741HKA/@@download/ENCFF741HKA.bigWig hg19 released antibody characterized with exemption ENCFF784JQF bigWig signal p-value ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF239UPK, ENCFF953XVS 1415893557 ENCODE Processing Pipeline 2d16ce966400262d6d58c223d01b5012 https://www.encodeproject.org/files/ENCFF784JQF/@@download/ENCFF784JQF.bigWig hg19 released antibody characterized with exemption ENCFF798LZN bigWig fold change over control ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF239UPK 891109704 ENCODE Processing Pipeline 0b958c6d56bb1940e3171af1e1119c04 https://www.encodeproject.org/files/ENCFF798LZN/@@download/ENCFF798LZN.bigWig hg19 released antibody characterized with exemption ENCFF748XNB bigWig fold change over control ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF953XVS 1234136628 ENCODE Processing Pipeline 81558a205c88fd3d04f0ea3dfab5de82 https://www.encodeproject.org/files/ENCFF748XNB/@@download/ENCFF748XNB.bigWig hg19 released antibody characterized with exemption ENCFF083BFM bigWig fold change over control ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF239UPK, ENCFF953XVS 1571027045 ENCODE Processing Pipeline 019e97dee3f1116813e32e3997316846 https://www.encodeproject.org/files/ENCFF083BFM/@@download/ENCFF083BFM.bigWig hg19 released antibody characterized with exemption ENCFF297JID bigBed narrowPeak conservative idr thresholded peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF067GOU 1208470 ENCODE Processing Pipeline 48e0e2a202232fb7f89cfe61434d9347 https://www.encodeproject.org/files/ENCFF297JID/@@download/ENCFF297JID.bigBed hg19 released antibody characterized with exemption ENCFF940DWZ bed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF239UPK 6413631 ENCODE Processing Pipeline 5f1784ff3f713b9e9b6c7e8d362d47e5 https://www.encodeproject.org/files/ENCFF940DWZ/@@download/ENCFF940DWZ.bed.gz hg19 released antibody characterized with exemption ENCFF722QWB bigBed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF887FOA 12985504 ENCODE Processing Pipeline d14509b7dc6a1c32fb51653e1beb51c0 https://www.encodeproject.org/files/ENCFF722QWB/@@download/ENCFF722QWB.bigBed hg19 released antibody characterized with exemption ENCFF021GNS bed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF953XVS 6788346 ENCODE Processing Pipeline 2b634e363e2df18273d0829fe2291a16 https://www.encodeproject.org/files/ENCFF021GNS/@@download/ENCFF021GNS.bed.gz hg19 released antibody characterized with exemption ENCFF887FOA bed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF239UPK, ENCFF953XVS 6975816 ENCODE Processing Pipeline 02ffbf46119471a7efb2a95a42494ffa https://www.encodeproject.org/files/ENCFF887FOA/@@download/ENCFF887FOA.bed.gz hg19 released antibody characterized with exemption ENCFF146QEU bigBed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF940DWZ 13121509 ENCODE Processing Pipeline 99c547317853ae5a82b9fdc5913e3ff9 https://www.encodeproject.org/files/ENCFF146QEU/@@download/ENCFF146QEU.bigBed hg19 released antibody characterized with exemption ENCFF637ZFU bigBed narrowPeak peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF021GNS 12863150 ENCODE Processing Pipeline 1d1f3b0aad6704c74014f92a23d1e874 https://www.encodeproject.org/files/ENCFF637ZFU/@@download/ENCFF637ZFU.bigBed hg19 released antibody characterized with exemption ENCFF067GOU bed narrowPeak conservative idr thresholded peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF021GNS, ENCFF887FOA, ENCFF940DWZ 605358 ENCODE Processing Pipeline d229a8cb697e549192a9908d92ac4b67 https://www.encodeproject.org/files/ENCFF067GOU/@@download/ENCFF067GOU.bed.gz hg19 released antibody characterized with exemption ENCFF314KAP bigBed narrowPeak optimal idr thresholded peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF136JTZ 1340658 ENCODE Processing Pipeline 28dd135036cb839d5d9234f812249e22 https://www.encodeproject.org/files/ENCFF314KAP/@@download/ENCFF314KAP.bigBed hg19 released antibody characterized with exemption ENCFF136JTZ bed narrowPeak optimal idr thresholded peaks ENCSR560SEP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RXRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF021GNS, ENCFF887FOA, ENCFF940DWZ 696373 ENCODE Processing Pipeline 36eda2d11365ed6799dfc348a90c33d6 https://www.encodeproject.org/files/ENCFF136JTZ/@@download/ENCFF136JTZ.bed.gz hg19 released antibody characterized with exemption ENCFF492CBJ fastq reads ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2203528433 Richard Myers, HAIB bc0cbed41e8bbffe2d05b2bfafcaa858 SRA:SRR5331237 https://www.encodeproject.org/files/ENCFF492CBJ/@@download/ENCFF492CBJ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF807WOU fastq reads ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1621707075 Richard Myers, HAIB 69a473a0a04d83cdf5f22b0017cbc150 SRA:SRR5331236 https://www.encodeproject.org/files/ENCFF807WOU/@@download/ENCFF807WOU.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF230VSB bam unfiltered alignments ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF807WOU 1863812324 ENCODE Processing Pipeline 92fe79bda7d05a54a2f71036c5181a4f https://www.encodeproject.org/files/ENCFF230VSB/@@download/ENCFF230VSB.bam GRCh38 released antibody characterized with exemption ENCFF889YJQ bam unfiltered alignments ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF807WOU 1861054938 ENCODE Processing Pipeline ed965b10852116ece800e182705910a3 https://www.encodeproject.org/files/ENCFF889YJQ/@@download/ENCFF889YJQ.bam hg19 released antibody characterized with exemption ENCFF843SEP bam unfiltered alignments ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF492CBJ, ENCFF807MUK 2526229076 ENCODE Processing Pipeline 297f6d30570fc768c363a4dc056e8c80 https://www.encodeproject.org/files/ENCFF843SEP/@@download/ENCFF843SEP.bam hg19 released antibody characterized with exemption ENCFF349DVS bam unfiltered alignments ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF492CBJ, ENCFF643CGH 2532141146 ENCODE Processing Pipeline 63967fc01968bf520850f527fae6557b https://www.encodeproject.org/files/ENCFF349DVS/@@download/ENCFF349DVS.bam GRCh38 released antibody characterized with exemption ENCFF145VRC bam alignments ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF807WOU 1424580326 ENCODE Processing Pipeline 3401aea2cea36d05412fe0954c0c318f https://www.encodeproject.org/files/ENCFF145VRC/@@download/ENCFF145VRC.bam GRCh38 released antibody characterized with exemption ENCFF031XNE bam alignments ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF807WOU 1424171528 ENCODE Processing Pipeline c2a1c5ca2dcacb085b83282dbc0ee675 https://www.encodeproject.org/files/ENCFF031XNE/@@download/ENCFF031XNE.bam hg19 released antibody characterized with exemption ENCFF684RLL bam alignments ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF492CBJ, ENCFF807MUK 1910898776 ENCODE Processing Pipeline e043aa97ad91d9d0d814ae46e055141c https://www.encodeproject.org/files/ENCFF684RLL/@@download/ENCFF684RLL.bam hg19 released antibody characterized with exemption ENCFF126DKX bam alignments ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF492CBJ, ENCFF643CGH 1912101768 ENCODE Processing Pipeline 58b4a24171a65b977ab213c2980d4cc8 https://www.encodeproject.org/files/ENCFF126DKX/@@download/ENCFF126DKX.bam GRCh38 released antibody characterized with exemption ENCFF812ICD bigWig signal p-value ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126DKX 668293066 ENCODE Processing Pipeline f21e2ac093612759cb26da38c368edf9 https://www.encodeproject.org/files/ENCFF812ICD/@@download/ENCFF812ICD.bigWig GRCh38 released antibody characterized with exemption ENCFF181DXF bigWig signal p-value ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF145VRC 540078184 ENCODE Processing Pipeline 7299fa85c9b25ec12f50eb301d3c1d0f https://www.encodeproject.org/files/ENCFF181DXF/@@download/ENCFF181DXF.bigWig GRCh38 released antibody characterized with exemption ENCFF582PSI bigWig signal p-value ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126DKX, ENCFF145VRC 646181865 ENCODE Processing Pipeline dc4121446be6b1eb65bd84c56baf4711 https://www.encodeproject.org/files/ENCFF582PSI/@@download/ENCFF582PSI.bigWig GRCh38 released antibody characterized with exemption ENCFF662ZUD bigWig fold change over control ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF145VRC 546751853 ENCODE Processing Pipeline 8000e8f283aaddd79ae138650aa1e958 https://www.encodeproject.org/files/ENCFF662ZUD/@@download/ENCFF662ZUD.bigWig GRCh38 released antibody characterized with exemption ENCFF567NUB bigWig fold change over control ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126DKX 677527776 ENCODE Processing Pipeline f2cb8399116159778bdb2292f09de74b https://www.encodeproject.org/files/ENCFF567NUB/@@download/ENCFF567NUB.bigWig GRCh38 released antibody characterized with exemption ENCFF531VJG bigWig fold change over control ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126DKX, ENCFF145VRC 993741722 ENCODE Processing Pipeline 3b9e3137ef3fdd57746097ced29ac05e https://www.encodeproject.org/files/ENCFF531VJG/@@download/ENCFF531VJG.bigWig GRCh38 released antibody characterized with exemption ENCFF112FKQ bed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126DKX 5930966 ENCODE Processing Pipeline 892c457374ec13bc20e1fd11bfe828fe https://www.encodeproject.org/files/ENCFF112FKQ/@@download/ENCFF112FKQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF616MAQ bed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF145VRC 6204623 ENCODE Processing Pipeline 556d36149ba28a82a4afd69188ec9fd1 https://www.encodeproject.org/files/ENCFF616MAQ/@@download/ENCFF616MAQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF946JSV bed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126DKX, ENCFF145VRC 6700911 ENCODE Processing Pipeline cebf48d55f3ef6c044196fe2cd75e126 https://www.encodeproject.org/files/ENCFF946JSV/@@download/ENCFF946JSV.bed.gz GRCh38 released antibody characterized with exemption ENCFF037ZVB bigBed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF112FKQ 13122809 ENCODE Processing Pipeline 4176a802e907e3453c673b3e921b6cd7 https://www.encodeproject.org/files/ENCFF037ZVB/@@download/ENCFF037ZVB.bigBed GRCh38 released antibody characterized with exemption ENCFF652LXG bigBed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF616MAQ 12951219 ENCODE Processing Pipeline d481c6402846a2b7482a9bb42c7efa51 https://www.encodeproject.org/files/ENCFF652LXG/@@download/ENCFF652LXG.bigBed GRCh38 released antibody characterized with exemption ENCFF813GRD bigBed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF946JSV 13042811 ENCODE Processing Pipeline 8e82dd096bd7d589ece625d12c9eb263 https://www.encodeproject.org/files/ENCFF813GRD/@@download/ENCFF813GRD.bigBed GRCh38 released antibody characterized with exemption ENCFF608OHW bed narrowPeak conservative idr thresholded peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF112FKQ, ENCFF419RSJ, ENCFF616MAQ, ENCFF946JSV 764582 ENCODE Processing Pipeline 438a855aa808a80b2c2dfe0f2c636f35 https://www.encodeproject.org/files/ENCFF608OHW/@@download/ENCFF608OHW.bed.gz GRCh38 released antibody characterized with exemption ENCFF442UVU bigBed narrowPeak conservative idr thresholded peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF608OHW 1463966 ENCODE Processing Pipeline bbdbc41bdf4f35b1428841ff6bcd2eca https://www.encodeproject.org/files/ENCFF442UVU/@@download/ENCFF442UVU.bigBed GRCh38 released antibody characterized with exemption ENCFF251TUO bed narrowPeak optimal idr thresholded peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF112FKQ, ENCFF419RSJ, ENCFF616MAQ, ENCFF946JSV 782154 ENCODE Processing Pipeline 215160c3fca539dd4182be198efe9256 https://www.encodeproject.org/files/ENCFF251TUO/@@download/ENCFF251TUO.bed.gz GRCh38 released antibody characterized with exemption ENCFF532VHE bigBed narrowPeak optimal idr thresholded peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF251TUO 1493424 ENCODE Processing Pipeline d430cab0f3414381fd6664fe50257aa7 https://www.encodeproject.org/files/ENCFF532VHE/@@download/ENCFF532VHE.bigBed GRCh38 released antibody characterized with exemption ENCFF078HLR bigWig signal p-value ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF684RLL 1326847170 ENCODE Processing Pipeline f38ff382ecd9c48fa3911b70de2f77dc https://www.encodeproject.org/files/ENCFF078HLR/@@download/ENCFF078HLR.bigWig hg19 released antibody characterized with exemption ENCFF888KTA bigWig signal p-value ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF031XNE, ENCFF203ABR 1111023160 ENCODE Processing Pipeline d9d42e865ad1bd5928bdcb7de166d5a6 https://www.encodeproject.org/files/ENCFF888KTA/@@download/ENCFF888KTA.bigWig hg19 released antibody characterized with exemption ENCFF915VSK bigWig signal p-value ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF031XNE, ENCFF203ABR, ENCFF684RLL 1408084945 ENCODE Processing Pipeline 1d2ce6f1f4484900793f98993f7ca87e https://www.encodeproject.org/files/ENCFF915VSK/@@download/ENCFF915VSK.bigWig hg19 released antibody characterized with exemption ENCFF176SCY bigWig fold change over control ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF684RLL 1237468565 ENCODE Processing Pipeline 8c22556014b4da1fd7893875e76dd66c https://www.encodeproject.org/files/ENCFF176SCY/@@download/ENCFF176SCY.bigWig hg19 released antibody characterized with exemption ENCFF962ACO bigWig fold change over control ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF031XNE, ENCFF203ABR 1011512443 ENCODE Processing Pipeline c449c1cef8b0b9b146f7f9b9427ac268 https://www.encodeproject.org/files/ENCFF962ACO/@@download/ENCFF962ACO.bigWig hg19 released antibody characterized with exemption ENCFF038AIJ bigWig fold change over control ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF031XNE, ENCFF203ABR, ENCFF684RLL 1648735752 ENCODE Processing Pipeline 250fb21e1e7049e542241d63db26ed37 https://www.encodeproject.org/files/ENCFF038AIJ/@@download/ENCFF038AIJ.bigWig hg19 released antibody characterized with exemption ENCFF256WMD bed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF684RLL 6552104 ENCODE Processing Pipeline 6239b30ab915bf541e55aa8971e430a6 https://www.encodeproject.org/files/ENCFF256WMD/@@download/ENCFF256WMD.bed.gz hg19 released antibody characterized with exemption ENCFF387MFJ bed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF031XNE, ENCFF203ABR 6724748 ENCODE Processing Pipeline 0a78df47cbdc86d8067f108c503904c7 https://www.encodeproject.org/files/ENCFF387MFJ/@@download/ENCFF387MFJ.bed.gz hg19 released antibody characterized with exemption ENCFF829PMF bed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF031XNE, ENCFF203ABR, ENCFF684RLL 6953725 ENCODE Processing Pipeline b6be92d13e840672aa072f4aeee81db8 https://www.encodeproject.org/files/ENCFF829PMF/@@download/ENCFF829PMF.bed.gz hg19 released antibody characterized with exemption ENCFF394VRY bigBed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF256WMD 13177262 ENCODE Processing Pipeline e3b7c44eb5626f5e69529f862a07b8ff https://www.encodeproject.org/files/ENCFF394VRY/@@download/ENCFF394VRY.bigBed hg19 released antibody characterized with exemption ENCFF625YYP bigBed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF387MFJ 13012676 ENCODE Processing Pipeline 50d84d7b8b3a5c68adf1dd1293a5e0e3 https://www.encodeproject.org/files/ENCFF625YYP/@@download/ENCFF625YYP.bigBed hg19 released antibody characterized with exemption ENCFF111HCX bigBed narrowPeak peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF829PMF 13177893 ENCODE Processing Pipeline ceaf8b883fa92d28d72b5aed67dddf88 https://www.encodeproject.org/files/ENCFF111HCX/@@download/ENCFF111HCX.bigBed hg19 released antibody characterized with exemption ENCFF195LUF bigBed narrowPeak conservative idr thresholded peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF929CRH 1552734 ENCODE Processing Pipeline c4b3bd8ca260cf613e72ee1e8378caf7 https://www.encodeproject.org/files/ENCFF195LUF/@@download/ENCFF195LUF.bigBed hg19 released antibody characterized with exemption ENCFF510XOE bed narrowPeak optimal idr thresholded peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF256WMD, ENCFF387MFJ, ENCFF829PMF 798056 ENCODE Processing Pipeline 5d718eed7ca4f03d74d810546354f146 https://www.encodeproject.org/files/ENCFF510XOE/@@download/ENCFF510XOE.bed.gz hg19 released antibody characterized with exemption ENCFF929CRH bed narrowPeak conservative idr thresholded peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF256WMD, ENCFF387MFJ, ENCFF829PMF 781802 ENCODE Processing Pipeline 070e19816135fe9dfb9948841ade8eb3 https://www.encodeproject.org/files/ENCFF929CRH/@@download/ENCFF929CRH.bed.gz hg19 released antibody characterized with exemption ENCFF953MEZ bigBed narrowPeak optimal idr thresholded peaks ENCSR092OVN ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-FOXA3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF510XOE 1580180 ENCODE Processing Pipeline 34a2a9c85738f956df8ba37867f1aa8d https://www.encodeproject.org/files/ENCFF953MEZ/@@download/ENCFF953MEZ.bigBed hg19 released antibody characterized with exemption ENCFF113FFZ fastq reads ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2030235556 Richard Myers, HAIB b100e2f9b5ad1e9de92823452749303c SRA:SRR5339564 https://www.encodeproject.org/files/ENCFF113FFZ/@@download/ENCFF113FFZ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF685OLC fastq reads ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1616336069 Richard Myers, HAIB 065560443c3f334eb27b9c4f718096af SRA:SRR5339565 https://www.encodeproject.org/files/ENCFF685OLC/@@download/ENCFF685OLC.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF954XER bam unfiltered alignments ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF685OLC 1679716668 ENCODE Processing Pipeline cf84d4f5063a7f264c58e9d31e3b199a https://www.encodeproject.org/files/ENCFF954XER/@@download/ENCFF954XER.bam GRCh38 released antibody characterized with exemption ENCFF073LYD bam unfiltered alignments ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF685OLC, ENCFF807MUK 1677142500 ENCODE Processing Pipeline 67b7a04272c79633c0dfcf716a10f9a7 https://www.encodeproject.org/files/ENCFF073LYD/@@download/ENCFF073LYD.bam hg19 released antibody characterized with exemption ENCFF892XHN bam unfiltered alignments ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF113FFZ, ENCFF643CGH 2098855497 ENCODE Processing Pipeline 094e122b59b2ab2eec603a16d671a321 https://www.encodeproject.org/files/ENCFF892XHN/@@download/ENCFF892XHN.bam GRCh38 released antibody characterized with exemption ENCFF136XWQ bam unfiltered alignments ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF113FFZ, ENCFF807MUK 2095424059 ENCODE Processing Pipeline 8a7480c9a3dd633ad88d3c511908609e https://www.encodeproject.org/files/ENCFF136XWQ/@@download/ENCFF136XWQ.bam hg19 released antibody characterized with exemption ENCFF735ODV bam alignments ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF685OLC 1330282830 ENCODE Processing Pipeline 62ffcc8e6a376a2098677b85550e92bb https://www.encodeproject.org/files/ENCFF735ODV/@@download/ENCFF735ODV.bam GRCh38 released antibody characterized with exemption ENCFF855HUE bam alignments ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF113FFZ, ENCFF643CGH 1631088352 ENCODE Processing Pipeline 9e2c38b8dc2c64449a89ef24194c24d7 https://www.encodeproject.org/files/ENCFF855HUE/@@download/ENCFF855HUE.bam GRCh38 released antibody characterized with exemption ENCFF257FKU bam alignments ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF685OLC, ENCFF807MUK 1330040272 ENCODE Processing Pipeline 093eb3f04382cfb0e832c4eed879e0db https://www.encodeproject.org/files/ENCFF257FKU/@@download/ENCFF257FKU.bam hg19 released antibody characterized with exemption ENCFF025OET bam alignments ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF113FFZ, ENCFF807MUK 1630670024 ENCODE Processing Pipeline bd6c099f2b2dc9bff5a39c4122e63751 https://www.encodeproject.org/files/ENCFF025OET/@@download/ENCFF025OET.bam hg19 released antibody characterized with exemption ENCFF789LJR bigWig signal p-value ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF735ODV 604142553 ENCODE Processing Pipeline 7b87f4565d9ee7d1020c6aced3e4ba52 https://www.encodeproject.org/files/ENCFF789LJR/@@download/ENCFF789LJR.bigWig GRCh38 released antibody characterized with exemption ENCFF547AZU bigWig signal p-value ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF855HUE 626026127 ENCODE Processing Pipeline c6ad14eb6c828308a8f4642c098c399d https://www.encodeproject.org/files/ENCFF547AZU/@@download/ENCFF547AZU.bigWig GRCh38 released antibody characterized with exemption ENCFF138SZD bigWig signal p-value ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF735ODV, ENCFF855HUE 667421412 ENCODE Processing Pipeline 8269b1a6b2065e59d2e5532d817b0b5a https://www.encodeproject.org/files/ENCFF138SZD/@@download/ENCFF138SZD.bigWig GRCh38 released antibody characterized with exemption ENCFF016LJK bigWig fold change over control ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF735ODV, ENCFF855HUE 903293402 ENCODE Processing Pipeline b442ac801c7dc71b7ff26203336c460c https://www.encodeproject.org/files/ENCFF016LJK/@@download/ENCFF016LJK.bigWig GRCh38 released antibody characterized with exemption ENCFF502JZE bigWig fold change over control ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF735ODV 518660334 ENCODE Processing Pipeline bd91c402a18e634422171309acd2cdbd https://www.encodeproject.org/files/ENCFF502JZE/@@download/ENCFF502JZE.bigWig GRCh38 released antibody characterized with exemption ENCFF779WRS bigWig fold change over control ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF855HUE 588614901 ENCODE Processing Pipeline 35fe1a87d609b0c95b496b154148aa3b https://www.encodeproject.org/files/ENCFF779WRS/@@download/ENCFF779WRS.bigWig GRCh38 released antibody characterized with exemption ENCFF813CNL bed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF735ODV 6458863 ENCODE Processing Pipeline 76e482ebed694534d8c03d0e056352e1 https://www.encodeproject.org/files/ENCFF813CNL/@@download/ENCFF813CNL.bed.gz GRCh38 released antibody characterized with exemption ENCFF494CAK bed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF855HUE 6506846 ENCODE Processing Pipeline 5cf14c510a9afd2fe2f6281db7b2b49d https://www.encodeproject.org/files/ENCFF494CAK/@@download/ENCFF494CAK.bed.gz GRCh38 released antibody characterized with exemption ENCFF175WNL bed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF735ODV, ENCFF855HUE 6866008 ENCODE Processing Pipeline eaed543347807bd4ffda9b99c46e3bb7 https://www.encodeproject.org/files/ENCFF175WNL/@@download/ENCFF175WNL.bed.gz GRCh38 released antibody characterized with exemption ENCFF333IAO bigBed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF175WNL 12689161 ENCODE Processing Pipeline 0036ce91cc2f0a917542096a8409bb1b https://www.encodeproject.org/files/ENCFF333IAO/@@download/ENCFF333IAO.bigBed GRCh38 released antibody characterized with exemption ENCFF685AWI bigBed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF813CNL 12664629 ENCODE Processing Pipeline 382bf7f1a9dee8090ab6c72cfec38e8b https://www.encodeproject.org/files/ENCFF685AWI/@@download/ENCFF685AWI.bigBed GRCh38 released antibody characterized with exemption ENCFF984WBB bigBed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF494CAK 12682812 ENCODE Processing Pipeline c6e0c9398fabbef424233db434a42669 https://www.encodeproject.org/files/ENCFF984WBB/@@download/ENCFF984WBB.bigBed GRCh38 released antibody characterized with exemption ENCFF444KHX bed narrowPeak conservative idr thresholded peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF175WNL, ENCFF419RSJ, ENCFF494CAK, ENCFF813CNL 902139 ENCODE Processing Pipeline 8c0c81baabb7fec72de77ef083265728 https://www.encodeproject.org/files/ENCFF444KHX/@@download/ENCFF444KHX.bed.gz GRCh38 released antibody characterized with exemption ENCFF406NSM bigBed narrowPeak conservative idr thresholded peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF444KHX 1582564 ENCODE Processing Pipeline 1097811ad0ddcaa9201fabfee6843aee https://www.encodeproject.org/files/ENCFF406NSM/@@download/ENCFF406NSM.bigBed GRCh38 released antibody characterized with exemption ENCFF364TOG bed narrowPeak optimal idr thresholded peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF175WNL, ENCFF419RSJ, ENCFF494CAK, ENCFF813CNL 915378 ENCODE Processing Pipeline 794536a29dea7eaf14bc78b8f948047a https://www.encodeproject.org/files/ENCFF364TOG/@@download/ENCFF364TOG.bed.gz GRCh38 released antibody characterized with exemption ENCFF687BBQ bigBed narrowPeak optimal idr thresholded peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF364TOG 1599704 ENCODE Processing Pipeline 468b94e808330ce5d5a167af8d21ca0e https://www.encodeproject.org/files/ENCFF687BBQ/@@download/ENCFF687BBQ.bigBed GRCh38 released antibody characterized with exemption ENCFF629TGP bigWig signal p-value ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF025OET, ENCFF203ABR 1345006540 ENCODE Processing Pipeline d00e76092dcbd8f1bdbd0c6ab576eaca https://www.encodeproject.org/files/ENCFF629TGP/@@download/ENCFF629TGP.bigWig hg19 released antibody characterized with exemption ENCFF035JYA bigWig signal p-value ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF257FKU 1166997921 ENCODE Processing Pipeline 22c35b43c6f28d778c0aa0c45b83add4 https://www.encodeproject.org/files/ENCFF035JYA/@@download/ENCFF035JYA.bigWig hg19 released antibody characterized with exemption ENCFF681DWB bigWig fold change over control ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF257FKU 964556795 ENCODE Processing Pipeline b9e1644827d0ac02b2e27ee8f827f865 https://www.encodeproject.org/files/ENCFF681DWB/@@download/ENCFF681DWB.bigWig hg19 released antibody characterized with exemption ENCFF096NSP bigWig signal p-value ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF025OET, ENCFF203ABR, ENCFF257FKU 1342729000 ENCODE Processing Pipeline e16035f106558ed3ce025d7ff8e8ede7 https://www.encodeproject.org/files/ENCFF096NSP/@@download/ENCFF096NSP.bigWig hg19 released antibody characterized with exemption ENCFF295RWG bigWig fold change over control ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF025OET, ENCFF203ABR 1066010462 ENCODE Processing Pipeline 2785c8ecb83558e8ffe99d2a0e8b18cc https://www.encodeproject.org/files/ENCFF295RWG/@@download/ENCFF295RWG.bigWig hg19 released antibody characterized with exemption ENCFF890FKS bigWig fold change over control ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF025OET, ENCFF203ABR, ENCFF257FKU 1491879573 ENCODE Processing Pipeline 8415026b0e5f1d18a934f31a1bde2ba0 https://www.encodeproject.org/files/ENCFF890FKS/@@download/ENCFF890FKS.bigWig hg19 released antibody characterized with exemption ENCFF026GZI bed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF257FKU 6666564 ENCODE Processing Pipeline df26a8b53cc302a97c3bc06c156c9591 https://www.encodeproject.org/files/ENCFF026GZI/@@download/ENCFF026GZI.bed.gz hg19 released antibody characterized with exemption ENCFF021GYN bed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF025OET, ENCFF203ABR, ENCFF257FKU 6841832 ENCODE Processing Pipeline fc9d78e456eed19c2432114fc51efc6a https://www.encodeproject.org/files/ENCFF021GYN/@@download/ENCFF021GYN.bed.gz hg19 released antibody characterized with exemption ENCFF665EBH bed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF025OET, ENCFF203ABR 6693445 ENCODE Processing Pipeline b054c92924fe384acaf073005c0a29d5 https://www.encodeproject.org/files/ENCFF665EBH/@@download/ENCFF665EBH.bed.gz hg19 released antibody characterized with exemption ENCFF739PYD bigBed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF026GZI 12519736 ENCODE Processing Pipeline e377fe784031d603207fcfb3c7d7a19e https://www.encodeproject.org/files/ENCFF739PYD/@@download/ENCFF739PYD.bigBed hg19 released antibody characterized with exemption ENCFF028ZQT bigBed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF665EBH 12521314 ENCODE Processing Pipeline 66de244ef0227db3c5864f88cf0935d6 https://www.encodeproject.org/files/ENCFF028ZQT/@@download/ENCFF028ZQT.bigBed hg19 released antibody characterized with exemption ENCFF625SOJ bigBed narrowPeak conservative idr thresholded peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF609LFJ 1668006 ENCODE Processing Pipeline 083ef9ef2b19dce3189de735cac27887 https://www.encodeproject.org/files/ENCFF625SOJ/@@download/ENCFF625SOJ.bigBed hg19 released antibody characterized with exemption ENCFF034YYS bigBed narrowPeak peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF021GYN 12643111 ENCODE Processing Pipeline ac4489e75dd14986fc4f2d6550c1ab3c https://www.encodeproject.org/files/ENCFF034YYS/@@download/ENCFF034YYS.bigBed hg19 released antibody characterized with exemption ENCFF609LFJ bed narrowPeak conservative idr thresholded peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF021GYN, ENCFF026GZI, ENCFF665EBH 927301 ENCODE Processing Pipeline 19417b8b7e876ca39b5a4962fdd221e8 https://www.encodeproject.org/files/ENCFF609LFJ/@@download/ENCFF609LFJ.bed.gz hg19 released antibody characterized with exemption ENCFF530TAO bed narrowPeak optimal idr thresholded peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF021GYN, ENCFF026GZI, ENCFF665EBH 934828 ENCODE Processing Pipeline d2dc8efce30ab53c23c6694071f80266 https://www.encodeproject.org/files/ENCFF530TAO/@@download/ENCFF530TAO.bed.gz hg19 released antibody characterized with exemption ENCFF266HPK bigBed narrowPeak optimal idr thresholded peaks ENCSR925BFV ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD2A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF530TAO 1678520 ENCODE Processing Pipeline 0458e2bc8b7a5e16bb8ed8766d318a6f https://www.encodeproject.org/files/ENCFF266HPK/@@download/ENCFF266HPK.bigBed hg19 released antibody characterized with exemption ENCFF550QWK fastq reads ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1599562828 Richard Myers, HAIB 6854eaf779be373ddfcd36f695e52453 SRA:SRR5339645 https://www.encodeproject.org/files/ENCFF550QWK/@@download/ENCFF550QWK.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF362DJJ fastq reads ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1978190743 Richard Myers, HAIB 7d56d794dd18ef6325eea3acd17d3e09 SRA:SRR5339646 https://www.encodeproject.org/files/ENCFF362DJJ/@@download/ENCFF362DJJ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF549ISQ bam unfiltered alignments ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF550QWK, ENCFF643CGH 1670767722 ENCODE Processing Pipeline ab6b81c32da64ce5c9cf8d783b3bf65a https://www.encodeproject.org/files/ENCFF549ISQ/@@download/ENCFF549ISQ.bam GRCh38 released antibody characterized with exemption ENCFF657FRU bam unfiltered alignments ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF362DJJ, ENCFF807MUK 2109601827 ENCODE Processing Pipeline b5648509775e6e7662e198538c029e08 https://www.encodeproject.org/files/ENCFF657FRU/@@download/ENCFF657FRU.bam hg19 released antibody characterized with exemption ENCFF342QDZ bam unfiltered alignments ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF362DJJ, ENCFF643CGH 2113210359 ENCODE Processing Pipeline f7d7a0b27676d94c5462309f8158b12c https://www.encodeproject.org/files/ENCFF342QDZ/@@download/ENCFF342QDZ.bam GRCh38 released antibody characterized with exemption ENCFF735WDN bam unfiltered alignments ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF550QWK, ENCFF807MUK 1667753368 ENCODE Processing Pipeline b122e5fc4cea8229337da4445fa91a7c https://www.encodeproject.org/files/ENCFF735WDN/@@download/ENCFF735WDN.bam hg19 released antibody characterized with exemption ENCFF473DTA bam alignments ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF550QWK, ENCFF807MUK 1252564511 ENCODE Processing Pipeline 7067873cf874024c2962a637e2166219 https://www.encodeproject.org/files/ENCFF473DTA/@@download/ENCFF473DTA.bam hg19 released antibody characterized with exemption ENCFF683DUA bam alignments ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF550QWK, ENCFF643CGH 1253134608 ENCODE Processing Pipeline a41c2d53f3067bc3c9e633f635120097 https://www.encodeproject.org/files/ENCFF683DUA/@@download/ENCFF683DUA.bam GRCh38 released antibody characterized with exemption ENCFF213AJW bam alignments ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF362DJJ, ENCFF643CGH 1552328848 ENCODE Processing Pipeline 896644e67b09f3b5256b2a456103d330 https://www.encodeproject.org/files/ENCFF213AJW/@@download/ENCFF213AJW.bam GRCh38 released antibody characterized with exemption ENCFF630CIO bam alignments ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF362DJJ, ENCFF807MUK 1551661424 ENCODE Processing Pipeline f70382bd96b8ecf1edec15f27f60d4da https://www.encodeproject.org/files/ENCFF630CIO/@@download/ENCFF630CIO.bam hg19 released antibody characterized with exemption ENCFF571AFJ bigWig signal p-value ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF683DUA 636377590 ENCODE Processing Pipeline 23af123a4d0156414fe1532fec3c0561 https://www.encodeproject.org/files/ENCFF571AFJ/@@download/ENCFF571AFJ.bigWig GRCh38 released antibody characterized with exemption ENCFF694FZX bigWig signal p-value ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF213AJW 616944514 ENCODE Processing Pipeline 5fad17ac8c15cee27a07048474c5aac8 https://www.encodeproject.org/files/ENCFF694FZX/@@download/ENCFF694FZX.bigWig GRCh38 released antibody characterized with exemption ENCFF171GOK bigWig signal p-value ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF213AJW, ENCFF683DUA 655300181 ENCODE Processing Pipeline 2b9e234986c0bce77eab0187484fb5e1 https://www.encodeproject.org/files/ENCFF171GOK/@@download/ENCFF171GOK.bigWig GRCh38 released antibody characterized with exemption ENCFF454HCW bigWig fold change over control ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF683DUA 484994615 ENCODE Processing Pipeline 6c6e9d3567ac2aa9801fd0895d88729a https://www.encodeproject.org/files/ENCFF454HCW/@@download/ENCFF454HCW.bigWig GRCh38 released antibody characterized with exemption ENCFF971IZU bigWig fold change over control ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF213AJW, ENCFF683DUA 882216208 ENCODE Processing Pipeline db0bbb53cd11545839d077142c022e0b https://www.encodeproject.org/files/ENCFF971IZU/@@download/ENCFF971IZU.bigWig GRCh38 released antibody characterized with exemption ENCFF392VQU bed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF683DUA 6289947 ENCODE Processing Pipeline a165657590edf0d0c43e2b379d51a64f https://www.encodeproject.org/files/ENCFF392VQU/@@download/ENCFF392VQU.bed.gz GRCh38 released antibody characterized with exemption ENCFF454DCX bed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF213AJW, ENCFF683DUA 6916613 ENCODE Processing Pipeline 5bc61563b7859e867d90047ea7256f7d https://www.encodeproject.org/files/ENCFF454DCX/@@download/ENCFF454DCX.bed.gz GRCh38 released antibody characterized with exemption ENCFF551LZM bigWig fold change over control ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF213AJW 579997436 ENCODE Processing Pipeline afa575754b3820ea6f0b1c99f1fc11a8 https://www.encodeproject.org/files/ENCFF551LZM/@@download/ENCFF551LZM.bigWig GRCh38 released antibody characterized with exemption ENCFF996SXJ bed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF213AJW 6575874 ENCODE Processing Pipeline e07315215dfa7619a021b02715e61e73 https://www.encodeproject.org/files/ENCFF996SXJ/@@download/ENCFF996SXJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF532OVE bigBed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF996SXJ 12768430 ENCODE Processing Pipeline 41e5e46015db9704bd11c57685b8854b https://www.encodeproject.org/files/ENCFF532OVE/@@download/ENCFF532OVE.bigBed GRCh38 released antibody characterized with exemption ENCFF690TBO bed narrowPeak conservative idr thresholded peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF392VQU, ENCFF419RSJ, ENCFF454DCX, ENCFF996SXJ 848762 ENCODE Processing Pipeline abcce5b1b0f96d5ee5638e646a9cff48 https://www.encodeproject.org/files/ENCFF690TBO/@@download/ENCFF690TBO.bed.gz GRCh38 released antibody characterized with exemption ENCFF927MSN bigBed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF392VQU 12802664 ENCODE Processing Pipeline ea2714d44e32519ddd5dd8b7252f8e5c https://www.encodeproject.org/files/ENCFF927MSN/@@download/ENCFF927MSN.bigBed GRCh38 released antibody characterized with exemption ENCFF508JNO bigBed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF454DCX 12747098 ENCODE Processing Pipeline 3e2549dec71272d3f294deab2891ef83 https://www.encodeproject.org/files/ENCFF508JNO/@@download/ENCFF508JNO.bigBed GRCh38 released antibody characterized with exemption ENCFF664WBS bigBed narrowPeak conservative idr thresholded peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF690TBO 1793367 ENCODE Processing Pipeline 1e2f2a4144d64be9390758c01a5d465c https://www.encodeproject.org/files/ENCFF664WBS/@@download/ENCFF664WBS.bigBed GRCh38 released antibody characterized with exemption ENCFF694MPE bed narrowPeak optimal idr thresholded peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF392VQU, ENCFF419RSJ, ENCFF454DCX, ENCFF996SXJ 879124 ENCODE Processing Pipeline 2f399499b14b0a5fbea239a6ab83f074 https://www.encodeproject.org/files/ENCFF694MPE/@@download/ENCFF694MPE.bed.gz GRCh38 released antibody characterized with exemption ENCFF490ADW bigBed narrowPeak optimal idr thresholded peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF694MPE 1840986 ENCODE Processing Pipeline 9c31a52ce9dc3450b003392542d983ed https://www.encodeproject.org/files/ENCFF490ADW/@@download/ENCFF490ADW.bigBed GRCh38 released antibody characterized with exemption ENCFF484QGF bigWig signal p-value ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF473DTA 1197246514 ENCODE Processing Pipeline 639792ce0245dc34485b77aab492af5f https://www.encodeproject.org/files/ENCFF484QGF/@@download/ENCFF484QGF.bigWig hg19 released antibody characterized with exemption ENCFF833WGH bigWig signal p-value ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF630CIO 1325480140 ENCODE Processing Pipeline 8b27ea34d3ebe28b2798f8dfa554ab32 https://www.encodeproject.org/files/ENCFF833WGH/@@download/ENCFF833WGH.bigWig hg19 released antibody characterized with exemption ENCFF390ILX bigWig signal p-value ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF473DTA, ENCFF630CIO 1575061606 ENCODE Processing Pipeline 922a92fd16858eb28c0760143728179e https://www.encodeproject.org/files/ENCFF390ILX/@@download/ENCFF390ILX.bigWig hg19 released antibody characterized with exemption ENCFF081ZZB bigWig fold change over control ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF473DTA 911946726 ENCODE Processing Pipeline 4e72df92f64334ad3ba785be0ce1d530 https://www.encodeproject.org/files/ENCFF081ZZB/@@download/ENCFF081ZZB.bigWig hg19 released antibody characterized with exemption ENCFF456JTU bigWig fold change over control ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF630CIO 1033248694 ENCODE Processing Pipeline c6989502142c93b8d8ad847f20989450 https://www.encodeproject.org/files/ENCFF456JTU/@@download/ENCFF456JTU.bigWig hg19 released antibody characterized with exemption ENCFF800ABS bed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF473DTA 6777657 ENCODE Processing Pipeline 24d3f3596cf651de03570cc005212e70 https://www.encodeproject.org/files/ENCFF800ABS/@@download/ENCFF800ABS.bed.gz hg19 released antibody characterized with exemption ENCFF154HFK bigWig fold change over control ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF473DTA, ENCFF630CIO 1480661892 ENCODE Processing Pipeline 09dbcd7db07139780d4d15f73e6a4243 https://www.encodeproject.org/files/ENCFF154HFK/@@download/ENCFF154HFK.bigWig hg19 released antibody characterized with exemption ENCFF737SVI bed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF630CIO 6985024 ENCODE Processing Pipeline 4173e70969c9a3c2cbc0edd37faa1bd3 https://www.encodeproject.org/files/ENCFF737SVI/@@download/ENCFF737SVI.bed.gz hg19 released antibody characterized with exemption ENCFF179SXN bigBed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF800ABS 12779497 ENCODE Processing Pipeline 56b0d2f18a2416d6a9a85197343c4ea7 https://www.encodeproject.org/files/ENCFF179SXN/@@download/ENCFF179SXN.bigBed hg19 released antibody characterized with exemption ENCFF570CWS bed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF473DTA, ENCFF630CIO 7005397 ENCODE Processing Pipeline a09f54fbdf4e70cc962f2dfa15044553 https://www.encodeproject.org/files/ENCFF570CWS/@@download/ENCFF570CWS.bed.gz hg19 released antibody characterized with exemption ENCFF349HXG bigBed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF737SVI 12828311 ENCODE Processing Pipeline 6bec695829c9a0077191b67dbc09fdad https://www.encodeproject.org/files/ENCFF349HXG/@@download/ENCFF349HXG.bigBed hg19 released antibody characterized with exemption ENCFF013VWT bigBed narrowPeak peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF570CWS 12656373 ENCODE Processing Pipeline 38920d1718e900fbf819b7754d1b33a0 https://www.encodeproject.org/files/ENCFF013VWT/@@download/ENCFF013VWT.bigBed hg19 released antibody characterized with exemption ENCFF846JHX bigBed narrowPeak conservative idr thresholded peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF642CIM 1840623 ENCODE Processing Pipeline fabf06b7ce61fccef61f0978e0c592d7 https://www.encodeproject.org/files/ENCFF846JHX/@@download/ENCFF846JHX.bigBed hg19 released antibody characterized with exemption ENCFF558QCA bed narrowPeak optimal idr thresholded peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF570CWS, ENCFF737SVI, ENCFF800ABS 901087 ENCODE Processing Pipeline cb473e1414569cc6cdff2335c5312986 https://www.encodeproject.org/files/ENCFF558QCA/@@download/ENCFF558QCA.bed.gz hg19 released antibody characterized with exemption ENCFF642CIM bed narrowPeak conservative idr thresholded peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF570CWS, ENCFF737SVI, ENCFF800ABS 864655 ENCODE Processing Pipeline 715f3c8bf1b1a8295110869262101595 https://www.encodeproject.org/files/ENCFF642CIM/@@download/ENCFF642CIM.bed.gz hg19 released antibody characterized with exemption ENCFF535ZKW bigBed narrowPeak optimal idr thresholded peaks ENCSR988LZG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ARID4B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF558QCA 1900035 ENCODE Processing Pipeline 527b23da4e17abda5e47b684105b5663 https://www.encodeproject.org/files/ENCFF535ZKW/@@download/ENCFF535ZKW.bigBed hg19 released antibody characterized with exemption ENCFF697NYE fastq reads ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 813478153 Richard Myers, HAIB 852e10b882338beb5b138b7549226b71 SRA:SRR5339061 https://www.encodeproject.org/files/ENCFF697NYE/@@download/ENCFF697NYE.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF260FBF fastq reads ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 785986476 Richard Myers, HAIB bb3bbd4b79cf7bc08a58d03fa26e6284 SRA:SRR5339060 https://www.encodeproject.org/files/ENCFF260FBF/@@download/ENCFF260FBF.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF998QTY bam alignments ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF260FBF, ENCFF807MUK 669083768 ENCODE Processing Pipeline 270c18075e14173932a0989a3c32d3de https://www.encodeproject.org/files/ENCFF998QTY/@@download/ENCFF998QTY.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF431UUS bam alignments ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF697NYE, ENCFF807MUK 688291916 ENCODE Processing Pipeline 7f13e03a5e36a2ba69528b06934dd045 https://www.encodeproject.org/files/ENCFF431UUS/@@download/ENCFF431UUS.bam hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF324OXP bigWig fold change over control ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF998QTY 284328699 ENCODE Processing Pipeline 001e3576f73560afaeabf64ab4e407ca https://www.encodeproject.org/files/ENCFF324OXP/@@download/ENCFF324OXP.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF033FPH bed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF431UUS 5772340 ENCODE Processing Pipeline 39683ebee60031adbe311d028e998ee2 https://www.encodeproject.org/files/ENCFF033FPH/@@download/ENCFF033FPH.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF257TGS bigWig signal p-value ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF431UUS 357266202 ENCODE Processing Pipeline 7ac63c564644351edcf491e36cca3902 https://www.encodeproject.org/files/ENCFF257TGS/@@download/ENCFF257TGS.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF017XBA bigWig signal p-value ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF998QTY 466465629 ENCODE Processing Pipeline bae169f9cade7ee43987c5213e280a8d https://www.encodeproject.org/files/ENCFF017XBA/@@download/ENCFF017XBA.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF616MNO bigWig signal p-value ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF431UUS, ENCFF998QTY 452281261 ENCODE Processing Pipeline 20b4f1431384f3446bb434b3f362e52f https://www.encodeproject.org/files/ENCFF616MNO/@@download/ENCFF616MNO.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF321CVZ bed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF998QTY 5704291 ENCODE Processing Pipeline 3a4a420538d55f87d738e99cc9182c37 https://www.encodeproject.org/files/ENCFF321CVZ/@@download/ENCFF321CVZ.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF216XJM bed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF431UUS, ENCFF998QTY 6582693 ENCODE Processing Pipeline 1ad7135f68daaa9c5045222c4fa8a456 https://www.encodeproject.org/files/ENCFF216XJM/@@download/ENCFF216XJM.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF548UXD bigBed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF033FPH 12984892 ENCODE Processing Pipeline d40a16fbf056e1dbad208036fbfee92d https://www.encodeproject.org/files/ENCFF548UXD/@@download/ENCFF548UXD.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF323JMT bigBed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF321CVZ 12970081 ENCODE Processing Pipeline e06fc6acd5f130f662c67651b684a5dd https://www.encodeproject.org/files/ENCFF323JMT/@@download/ENCFF323JMT.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF962RQU bigBed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF216XJM 13015417 ENCODE Processing Pipeline 1d949faace9161ad81e232852fb080e7 https://www.encodeproject.org/files/ENCFF962RQU/@@download/ENCFF962RQU.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF086NPR bigWig fold change over control ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF431UUS 299650336 ENCODE Processing Pipeline 3b1b45908558ed419f013655b0c5caa0 https://www.encodeproject.org/files/ENCFF086NPR/@@download/ENCFF086NPR.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF977MSQ bigWig fold change over control ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF431UUS, ENCFF998QTY 530980846 ENCODE Processing Pipeline 6e786e957c5937c22080dad26c5c7319 https://www.encodeproject.org/files/ENCFF977MSQ/@@download/ENCFF977MSQ.bigWig hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF104YWL bed narrowPeak optimal idr thresholded peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF033FPH, ENCFF216XJM, ENCFF321CVZ 277454 ENCODE Processing Pipeline a50703f33fc1527de3069617ddc8f8e1 https://www.encodeproject.org/files/ENCFF104YWL/@@download/ENCFF104YWL.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF248QXC bigBed narrowPeak optimal idr thresholded peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF104YWL 583236 ENCODE Processing Pipeline da960a743f9df494a0a3c8974af61187 https://www.encodeproject.org/files/ENCFF248QXC/@@download/ENCFF248QXC.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF682HTY bed narrowPeak conservative idr thresholded peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF033FPH, ENCFF216XJM, ENCFF321CVZ 261559 ENCODE Processing Pipeline 56a27d0d26012d331e05e7373e332d14 https://www.encodeproject.org/files/ENCFF682HTY/@@download/ENCFF682HTY.bed.gz hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF771BLM bigBed narrowPeak conservative idr thresholded peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF682HTY 557301 ENCODE Processing Pipeline 2d28238ca94c507eecc9f4ef8d7802a3 https://www.encodeproject.org/files/ENCFF771BLM/@@download/ENCFF771BLM.bigBed hg19 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF531DHY bam unfiltered alignments ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF260FBF, ENCFF643CGH 894386513 ENCODE Processing Pipeline bfe28dcded376d854de8a20ec2f4b938 https://www.encodeproject.org/files/ENCFF531DHY/@@download/ENCFF531DHY.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF612BOB bam unfiltered alignments ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF697NYE 917713920 ENCODE Processing Pipeline e25953cb78f135fed92fa1aaa3187d77 https://www.encodeproject.org/files/ENCFF612BOB/@@download/ENCFF612BOB.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF238MUN bam alignments ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF260FBF, ENCFF643CGH 668966183 ENCODE Processing Pipeline b41302d4970f8f36da474d4ba798dba1 https://www.encodeproject.org/files/ENCFF238MUN/@@download/ENCFF238MUN.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF684QYE bam alignments ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF697NYE 688163437 ENCODE Processing Pipeline db3862aae93f1e435c6780b5c31c3145 https://www.encodeproject.org/files/ENCFF684QYE/@@download/ENCFF684QYE.bam GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF797WCG bigWig signal p-value ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF238MUN, ENCFF582CVJ 426826706 ENCODE Processing Pipeline a16de53387bdc3448d2cfbdd5934e019 https://www.encodeproject.org/files/ENCFF797WCG/@@download/ENCFF797WCG.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF041FWV bigWig signal p-value ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF238MUN, ENCFF582CVJ, ENCFF684QYE 449118714 ENCODE Processing Pipeline 4bcca33181dcb8b6313013fe0aa9042b https://www.encodeproject.org/files/ENCFF041FWV/@@download/ENCFF041FWV.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF143UMJ bigWig signal p-value ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF582CVJ, ENCFF684QYE 360396291 ENCODE Processing Pipeline c27e1c4464feb52477fae36645b3eaa4 https://www.encodeproject.org/files/ENCFF143UMJ/@@download/ENCFF143UMJ.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF658GJX bigWig fold change over control ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF582CVJ, ENCFF684QYE 300251488 ENCODE Processing Pipeline 92f500801e3ac151b46204b36f165961 https://www.encodeproject.org/files/ENCFF658GJX/@@download/ENCFF658GJX.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF648KAV bigWig fold change over control ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF238MUN, ENCFF582CVJ, ENCFF684QYE 519603313 ENCODE Processing Pipeline 31c08bc65143f803a7c886ce9ce48f9a https://www.encodeproject.org/files/ENCFF648KAV/@@download/ENCFF648KAV.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF674ZEE bigWig fold change over control ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF238MUN, ENCFF582CVJ 294780204 ENCODE Processing Pipeline 7c73eab68720783e71d440278cc8868a https://www.encodeproject.org/files/ENCFF674ZEE/@@download/ENCFF674ZEE.bigWig GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF803QBG bed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF238MUN, ENCFF582CVJ 5576011 ENCODE Processing Pipeline 5ed56f858dd89b356d9a1bfe09bd37fb https://www.encodeproject.org/files/ENCFF803QBG/@@download/ENCFF803QBG.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF889YMR bed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF238MUN, ENCFF582CVJ, ENCFF684QYE 6357492 ENCODE Processing Pipeline 021e9cc9006edbe78b61b61243410013 https://www.encodeproject.org/files/ENCFF889YMR/@@download/ENCFF889YMR.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF616EFB bed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF582CVJ, ENCFF684QYE 5625225 ENCODE Processing Pipeline 6577ee32e8ae74255e911ca8ff0945aa https://www.encodeproject.org/files/ENCFF616EFB/@@download/ENCFF616EFB.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF618XMR bigBed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF889YMR 13013482 ENCODE Processing Pipeline 48b1dd2f3addbf34d383d7a648b1b7d0 https://www.encodeproject.org/files/ENCFF618XMR/@@download/ENCFF618XMR.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF894AWT bed narrowPeak optimal idr thresholded peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF616EFB, ENCFF803QBG, ENCFF889YMR 271769 ENCODE Processing Pipeline 7f336872fcf0ecec2bda327fb60c37ce https://www.encodeproject.org/files/ENCFF894AWT/@@download/ENCFF894AWT.bed.gz GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF824LEM bigBed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF616EFB 12931969 ENCODE Processing Pipeline aab28cfd417eabaae66bc4f8f62a52b0 https://www.encodeproject.org/files/ENCFF824LEM/@@download/ENCFF824LEM.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF451DPQ bigBed narrowPeak peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF803QBG 12948916 ENCODE Processing Pipeline 4b7363929fd2aece35650a08f834d368 https://www.encodeproject.org/files/ENCFF451DPQ/@@download/ENCFF451DPQ.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF774SYH bigBed narrowPeak optimal idr thresholded peaks ENCSR616WEG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HBP1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF894AWT 575138 ENCODE Processing Pipeline c96ec3e585a06ec1eb2aa272bfd85c26 https://www.encodeproject.org/files/ENCFF774SYH/@@download/ENCFF774SYH.bigBed GRCh38 released control low read depth, borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF674UHN fastq reads ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1426978299 Richard Myers, HAIB 2db3952bb3c764590f171a06b374c1b6 SRA:SRR5339612 https://www.encodeproject.org/files/ENCFF674UHN/@@download/ENCFF674UHN.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF887ZSW fastq reads ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1918826516 Richard Myers, HAIB af5e12eddce012a030c97ff2e790dd35 SRA:SRR5339611 https://www.encodeproject.org/files/ENCFF887ZSW/@@download/ENCFF887ZSW.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF998ZIJ bam unfiltered alignments ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF674UHN, ENCFF807MUK 1680634974 ENCODE Processing Pipeline 85159d44dcea586182728dff2ab621b6 https://www.encodeproject.org/files/ENCFF998ZIJ/@@download/ENCFF998ZIJ.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF568LZN bam unfiltered alignments ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF674UHN 1683593491 ENCODE Processing Pipeline 8a72b162b867c2ee062ce773d9956cb0 https://www.encodeproject.org/files/ENCFF568LZN/@@download/ENCFF568LZN.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF809TPQ bam unfiltered alignments ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF887ZSW 2168824678 ENCODE Processing Pipeline 10cc8fdbd8cdbc6cf77cfd007d132bf2 https://www.encodeproject.org/files/ENCFF809TPQ/@@download/ENCFF809TPQ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF464SUA bam unfiltered alignments ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF887ZSW 2165412612 ENCODE Processing Pipeline bf22fbdd3a56e60e6284d5157d26d4eb https://www.encodeproject.org/files/ENCFF464SUA/@@download/ENCFF464SUA.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF425DTQ bam alignments ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF674UHN 1285257952 ENCODE Processing Pipeline dde293758c499a59e9be5cd406ca7f5c https://www.encodeproject.org/files/ENCFF425DTQ/@@download/ENCFF425DTQ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF905KCK bam alignments ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF674UHN, ENCFF807MUK 1284669788 ENCODE Processing Pipeline c406b7ba96b53cdf159857d6287b40a8 https://www.encodeproject.org/files/ENCFF905KCK/@@download/ENCFF905KCK.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF392ZYL bam alignments ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF887ZSW 1605622042 ENCODE Processing Pipeline 5d8b64088d07b3e1d008844f41389d64 https://www.encodeproject.org/files/ENCFF392ZYL/@@download/ENCFF392ZYL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF913QFK bam alignments ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF887ZSW 1605012320 ENCODE Processing Pipeline 4f19ba6c0557a4b9e7d0e39aa6b8700d https://www.encodeproject.org/files/ENCFF913QFK/@@download/ENCFF913QFK.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF325QKP bigWig signal p-value ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF392ZYL 639679927 ENCODE Processing Pipeline afaaab7e6bdc7c2206c8ec7e322ffcb9 https://www.encodeproject.org/files/ENCFF325QKP/@@download/ENCFF325QKP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF307IWB bigWig fold change over control ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF392ZYL 613488256 ENCODE Processing Pipeline 21407c19fbb8880246a766d6670d4d80 https://www.encodeproject.org/files/ENCFF307IWB/@@download/ENCFF307IWB.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF156BEU bigWig signal p-value ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF425DTQ 535281255 ENCODE Processing Pipeline 79007e446ca77af6adc8b3d7229c59ed https://www.encodeproject.org/files/ENCFF156BEU/@@download/ENCFF156BEU.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF695UKE bigWig signal p-value ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF392ZYL, ENCFF425DTQ 676512065 ENCODE Processing Pipeline baf6ef3e53c10b44b422cee67055e52f https://www.encodeproject.org/files/ENCFF695UKE/@@download/ENCFF695UKE.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF795SZN bigWig fold change over control ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF425DTQ 514886827 ENCODE Processing Pipeline 7357e5d09bd3c980ae426d38a1e81efc https://www.encodeproject.org/files/ENCFF795SZN/@@download/ENCFF795SZN.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF895QBI bigWig fold change over control ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF392ZYL, ENCFF425DTQ 936358604 ENCODE Processing Pipeline 1ea2cf4c5d3120d11516c6b17e7f8c60 https://www.encodeproject.org/files/ENCFF895QBI/@@download/ENCFF895QBI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF089XBM bed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF425DTQ 6132076 ENCODE Processing Pipeline 4327439ed5eb7c23dc5606de77911429 https://www.encodeproject.org/files/ENCFF089XBM/@@download/ENCFF089XBM.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF522BHC bed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF392ZYL 6192312 ENCODE Processing Pipeline c164ceda0dd3344190175cd9f6c7e3b7 https://www.encodeproject.org/files/ENCFF522BHC/@@download/ENCFF522BHC.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF495GBO bigBed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF522BHC 13033927 ENCODE Processing Pipeline 316c3092650bf4c22284ec8fbf0fd3a7 https://www.encodeproject.org/files/ENCFF495GBO/@@download/ENCFF495GBO.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF233KNL bed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF392ZYL, ENCFF425DTQ 6747765 ENCODE Processing Pipeline e4eb78b8a516b2aa2b381df42f6c9b63 https://www.encodeproject.org/files/ENCFF233KNL/@@download/ENCFF233KNL.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF903HWC bigBed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF089XBM 13124910 ENCODE Processing Pipeline 96e14c572709a93bc624aaa57558ad38 https://www.encodeproject.org/files/ENCFF903HWC/@@download/ENCFF903HWC.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF867UQQ bigBed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF233KNL 13116505 ENCODE Processing Pipeline 989099184dddb151bdc9669bd442855d https://www.encodeproject.org/files/ENCFF867UQQ/@@download/ENCFF867UQQ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF173MFM bigBed narrowPeak conservative idr thresholded peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF299JTM 1040246 ENCODE Processing Pipeline 0e186c9dc40eaf3c2c3ed1448bccaa26 https://www.encodeproject.org/files/ENCFF173MFM/@@download/ENCFF173MFM.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF299JTM bed narrowPeak conservative idr thresholded peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF089XBM, ENCFF233KNL, ENCFF419RSJ, ENCFF522BHC 505337 ENCODE Processing Pipeline 050d29f551b742077c5f8be415106078 https://www.encodeproject.org/files/ENCFF299JTM/@@download/ENCFF299JTM.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF703VBH bed narrowPeak optimal idr thresholded peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF089XBM, ENCFF233KNL, ENCFF419RSJ, ENCFF522BHC 707686 ENCODE Processing Pipeline 4d298c239646137f7678484c9d3d83fc https://www.encodeproject.org/files/ENCFF703VBH/@@download/ENCFF703VBH.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF731ORL bigBed narrowPeak optimal idr thresholded peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF703VBH 1343587 ENCODE Processing Pipeline c14c9662acb56b5fcba41db454cd94d8 https://www.encodeproject.org/files/ENCFF731ORL/@@download/ENCFF731ORL.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF593AYJ bigWig signal p-value ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF913QFK 1214247008 ENCODE Processing Pipeline fa1dbef45efc71cf46247a53f41ebe66 https://www.encodeproject.org/files/ENCFF593AYJ/@@download/ENCFF593AYJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF452DDJ bigWig signal p-value ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF905KCK 1341013670 ENCODE Processing Pipeline 2fef2ce25ddf959c79ddcaca955c2e53 https://www.encodeproject.org/files/ENCFF452DDJ/@@download/ENCFF452DDJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF517FGS bigWig signal p-value ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF905KCK, ENCFF913QFK 1355957857 ENCODE Processing Pipeline 7e766b7a63e8917021fd8360d58265d3 https://www.encodeproject.org/files/ENCFF517FGS/@@download/ENCFF517FGS.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF721DXB bigWig fold change over control ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF913QFK 1085956959 ENCODE Processing Pipeline a430f95d095720b02f54e4f0eea08d49 https://www.encodeproject.org/files/ENCFF721DXB/@@download/ENCFF721DXB.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF170AON bigWig fold change over control ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF905KCK 981121252 ENCODE Processing Pipeline cef175fa610a0228028c0a9d05221fc8 https://www.encodeproject.org/files/ENCFF170AON/@@download/ENCFF170AON.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF506FGX bigWig fold change over control ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF905KCK, ENCFF913QFK 1578706984 ENCODE Processing Pipeline 981722fe872f5a4c1d255898dac1f82f https://www.encodeproject.org/files/ENCFF506FGX/@@download/ENCFF506FGX.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF061UUX bed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF913QFK 6606673 ENCODE Processing Pipeline 930238eeeba70b01e12f0675ba28dc18 https://www.encodeproject.org/files/ENCFF061UUX/@@download/ENCFF061UUX.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF338AGZ bed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF905KCK 6537015 ENCODE Processing Pipeline c556e712ba20545c81d98bcb8b0160db https://www.encodeproject.org/files/ENCFF338AGZ/@@download/ENCFF338AGZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF066LZS bed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF905KCK, ENCFF913QFK 6941256 ENCODE Processing Pipeline 831b0091e45e1fff2e3f22a44d36294a https://www.encodeproject.org/files/ENCFF066LZS/@@download/ENCFF066LZS.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF687HVB bigBed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF338AGZ 12931700 ENCODE Processing Pipeline b348c74826d09ef8f80d09f9450a8647 https://www.encodeproject.org/files/ENCFF687HVB/@@download/ENCFF687HVB.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF878PDS bigBed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF061UUX 13023384 ENCODE Processing Pipeline 24fd68a74703680c33fa2674e30f2824 https://www.encodeproject.org/files/ENCFF878PDS/@@download/ENCFF878PDS.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF199EQW bigBed narrowPeak peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF066LZS 13049995 ENCODE Processing Pipeline 1945e4d1f703b2c85ae38853e5c3ca44 https://www.encodeproject.org/files/ENCFF199EQW/@@download/ENCFF199EQW.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF273UXU bed narrowPeak conservative idr thresholded peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF061UUX, ENCFF066LZS, ENCFF338AGZ 505127 ENCODE Processing Pipeline fc88ab5a5a852a8cc18f675051ed310f https://www.encodeproject.org/files/ENCFF273UXU/@@download/ENCFF273UXU.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF524UBS bigBed narrowPeak conservative idr thresholded peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF273UXU 1080681 ENCODE Processing Pipeline ad16535b891f930fe76a0386339c9fab https://www.encodeproject.org/files/ENCFF524UBS/@@download/ENCFF524UBS.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF636RTO bigBed narrowPeak optimal idr thresholded peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF665EOZ 1337314 ENCODE Processing Pipeline 098468b79ad5a462baa27f7f2e1fb190 https://www.encodeproject.org/files/ENCFF636RTO/@@download/ENCFF636RTO.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF665EOZ bed narrowPeak optimal idr thresholded peaks ENCSR961WLZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SOX5-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF061UUX, ENCFF066LZS, ENCFF338AGZ 673774 ENCODE Processing Pipeline dc39243c3b191952ac385581e35e25ef https://www.encodeproject.org/files/ENCFF665EOZ/@@download/ENCFF665EOZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF481CKZ fastq reads ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF817NUS 2923487537 Richard Myers, HAIB 5c5b8a7751047276e165625a4dcf9456 SRA:SRR6214337 https://www.encodeproject.org/files/ENCFF481CKZ/@@download/ENCFF481CKZ.fastq.gz HiSeq 2000 /files/ENCFF962ZAE/ released antibody characterized with exemption ENCFF817NUS fastq reads ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF481CKZ 2972443191 Richard Myers, HAIB c6709edd6a2732a2eb9bd9af2abee80d SRA:SRR6214337 https://www.encodeproject.org/files/ENCFF817NUS/@@download/ENCFF817NUS.fastq.gz HiSeq 2000 /files/ENCFF310JWS/ released antibody characterized with exemption ENCFF650JSX bam unfiltered alignments ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF481CKZ, ENCFF807MUK, ENCFF817NUS 7002005788 ENCODE Processing Pipeline 8f34428c5a4ee713934689aa9fab2901 https://www.encodeproject.org/files/ENCFF650JSX/@@download/ENCFF650JSX.bam hg19 released antibody characterized with exemption ENCFF247QPH bam alignments ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF481CKZ, ENCFF807MUK, ENCFF817NUS 5220567387 ENCODE Processing Pipeline a13d8fe02599f0032c381dd76b3c75f7 https://www.encodeproject.org/files/ENCFF247QPH/@@download/ENCFF247QPH.bam hg19 released antibody characterized with exemption ENCFF047HQY bam alignments ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF481CKZ, ENCFF643CGH, ENCFF817NUS 5228785527 ENCODE Processing Pipeline 71b336f07f6ae55a8848630a0344bf65 https://www.encodeproject.org/files/ENCFF047HQY/@@download/ENCFF047HQY.bam GRCh38 released antibody characterized with exemption ENCFF607GXS bam unfiltered alignments ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF481CKZ, ENCFF643CGH, ENCFF817NUS 7034722819 ENCODE Processing Pipeline debd58fb771b8c7b68f5d6db1a701aeb https://www.encodeproject.org/files/ENCFF607GXS/@@download/ENCFF607GXS.bam GRCh38 released antibody characterized with exemption ENCFF305JQA bigWig signal p-value ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF047HQY 1377711378 ENCODE Processing Pipeline ff0d326b0d3016e98f47c41dd5838e07 https://www.encodeproject.org/files/ENCFF305JQA/@@download/ENCFF305JQA.bigWig GRCh38 released antibody characterized with exemption ENCFF002XED bigWig fold change over control ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF047HQY 1586959709 ENCODE Processing Pipeline ed9d39802d6f01dc2244370073f0b4e3 https://www.encodeproject.org/files/ENCFF002XED/@@download/ENCFF002XED.bigWig GRCh38 released antibody characterized with exemption ENCFF483STZ bed narrowPeak peaks ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF047HQY 5890414 ENCODE Processing Pipeline 34fcb7afb8c4c1880b80e938c8ed31a3 https://www.encodeproject.org/files/ENCFF483STZ/@@download/ENCFF483STZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF970SYA bigBed narrowPeak peaks ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF483STZ 11967434 ENCODE Processing Pipeline 681f6ac6eb58f38161b92bda171e8c66 https://www.encodeproject.org/files/ENCFF970SYA/@@download/ENCFF970SYA.bigBed GRCh38 released antibody characterized with exemption ENCFF087RBS bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF483STZ 14986 ENCODE Processing Pipeline 373133c8038619a4aa40b373ee2d2038 https://www.encodeproject.org/files/ENCFF087RBS/@@download/ENCFF087RBS.bed.gz GRCh38 released antibody characterized with exemption ENCFF459XDP bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF087RBS 87916 ENCODE Processing Pipeline d854c96b3321faebf3da713a3b095945 https://www.encodeproject.org/files/ENCFF459XDP/@@download/ENCFF459XDP.bigBed GRCh38 released antibody characterized with exemption ENCFF631VTP bigWig fold change over control ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF247QPH 1541699043 ENCODE Processing Pipeline 292aeb90cae10ee35e73d5ebd8e995a2 https://www.encodeproject.org/files/ENCFF631VTP/@@download/ENCFF631VTP.bigWig hg19 released antibody characterized with exemption ENCFF945WSK bigBed narrowPeak peaks ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF042IVB 11945719 ENCODE Processing Pipeline 622f92ffc4eceb25f88ac386ff5e64d3 https://www.encodeproject.org/files/ENCFF945WSK/@@download/ENCFF945WSK.bigBed hg19 released antibody characterized with exemption ENCFF302VSW bigWig signal p-value ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF247QPH 1372664771 ENCODE Processing Pipeline 70e770be5f429a55756e65502c146933 https://www.encodeproject.org/files/ENCFF302VSW/@@download/ENCFF302VSW.bigWig hg19 released antibody characterized with exemption ENCFF207RWS bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF042IVB 14621 ENCODE Processing Pipeline ae9e8cf950011a04de3e6a6f675ae697 https://www.encodeproject.org/files/ENCFF207RWS/@@download/ENCFF207RWS.bed.gz hg19 released antibody characterized with exemption ENCFF123QQN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF207RWS 85622 ENCODE Processing Pipeline a0caad08952704e8477ed27baf114d13 https://www.encodeproject.org/files/ENCFF123QQN/@@download/ENCFF123QQN.bigBed hg19 released antibody characterized with exemption ENCFF042IVB bed narrowPeak peaks ENCSR862NOW ChIP-seq UBERON:0004648 esophagus muscularis mucosa tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF247QPH 5882012 ENCODE Processing Pipeline e05bd21083630823c426aa307c5035f7 https://www.encodeproject.org/files/ENCFF042IVB/@@download/ENCFF042IVB.bed.gz hg19 released antibody characterized with exemption ENCFF000PXS bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PYD 770601804 Richard Myers, HAIB 2a9f709c235dcc838c035503e2c742bd https://www.encodeproject.org/files/ENCFF000PXS/@@download/ENCFF000PXS.bam hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PXT bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PYJ 1095263144 Richard Myers, HAIB 59fc32ff2c5988b29fec74a3b97b842f https://www.encodeproject.org/files/ENCFF000PXT/@@download/ENCFF000PXT.bam hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PXV bigBed broadPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UJL 1037259 Richard Myers, HAIB d085e3040772d85d0bda634d6ee0eb9c https://www.encodeproject.org/files/ENCFF000PXV/@@download/ENCFF000PXV.bigBed hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PXX bigBed broadPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UJM 990307 Richard Myers, HAIB 1e77d06eec04682789befa5612ef6ebb https://www.encodeproject.org/files/ENCFF000PXX/@@download/ENCFF000PXX.bigBed hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PYA bigWig raw signal ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 93203185 Richard Myers, HAIB 64972e0aa9b844e1fe02ee6bf01e5841 https://www.encodeproject.org/files/ENCFF000PYA/@@download/ENCFF000PYA.bigWig hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PYB bigWig raw signal ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 37746731 Richard Myers, HAIB f37b17ce52368968d27284ae5b62a8fb https://www.encodeproject.org/files/ENCFF000PYB/@@download/ENCFF000PYB.bigWig hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF000PYD fastq reads ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 691541138 Richard Myers, HAIB de9544df67ea4fb551faa82a4e0962f1 https://www.encodeproject.org/files/ENCFF000PYD/@@download/ENCFF000PYD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PYJ fastq reads ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1126063251 Richard Myers, HAIB 8b2467cdbee1eddb94f48d537271dc5a https://www.encodeproject.org/files/ENCFF000PYJ/@@download/ENCFF000PYJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UJL bed broadPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 712783 Richard Myers, HAIB d48bb62e6f61c79a64d8a4a277d0873a https://www.encodeproject.org/files/ENCFF001UJL/@@download/ENCFF001UJL.bed.gz hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF001UJM bed broadPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 618583 Richard Myers, HAIB 192c6cd042b8dc7ecafa5dcaca4aea57 https://www.encodeproject.org/files/ENCFF001UJM/@@download/ENCFF001UJM.bed.gz hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF002CLS bed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 892491 ENCODE Consortium Analysis Working Group 749db3fdd18af5e96e12683dc67852b6 https://www.encodeproject.org/files/ENCFF002CLS/@@download/ENCFF002CLS.bed.gz hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, biological replicates with identical biosample insufficient read depth ENCFF914TDH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE ENCFF002CLS 1931026 ENCODE Consortium 9d9264405df2795cdc552890e53e4e1f https://www.encodeproject.org/files/ENCFF914TDH/@@download/ENCFF914TDH.bigBed hg19 archived low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF691BQZ bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PYJ, ENCFF643CGH 630218936 ENCODE Processing Pipeline a533e02db31afe010b09e75237213d39 https://www.encodeproject.org/files/ENCFF691BQZ/@@download/ENCFF691BQZ.bam GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF552MDV bam unfiltered alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PYJ, ENCFF643CGH 1185097709 ENCODE Processing Pipeline 916ac66c2106e24f63fb992c970deed9 https://www.encodeproject.org/files/ENCFF552MDV/@@download/ENCFF552MDV.bam GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF108YVY bam unfiltered alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PYD, ENCFF643CGH 814025289 ENCODE Processing Pipeline cc08bb682c5869614975a0a294935c75 https://www.encodeproject.org/files/ENCFF108YVY/@@download/ENCFF108YVY.bam GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF391HFU bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PYD, ENCFF643CGH 305672367 ENCODE Processing Pipeline bf3c95bde51a6c7ed5e656da66a76b1c https://www.encodeproject.org/files/ENCFF391HFU/@@download/ENCFF391HFU.bam GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF938RUC bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF691BQZ, ENCFF913HVS 477896707 ENCODE Processing Pipeline f45dcce0b2b2432e25f96222186d5dd2 https://www.encodeproject.org/files/ENCFF938RUC/@@download/ENCFF938RUC.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF636ARX bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234NVU, ENCFF391HFU, ENCFF691BQZ, ENCFF913HVS 633548092 ENCODE Processing Pipeline 65b925dc9fa7cc2e24bdc4a67670fdef https://www.encodeproject.org/files/ENCFF636ARX/@@download/ENCFF636ARX.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF952VWD bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234NVU, ENCFF391HFU 141975132 ENCODE Processing Pipeline 2bd75b70c9c56041292c75cff9a08290 https://www.encodeproject.org/files/ENCFF952VWD/@@download/ENCFF952VWD.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF320OVF bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF691BQZ, ENCFF913HVS 308123571 ENCODE Processing Pipeline 43c4b51d4110b2d74cf838f77c9a016a https://www.encodeproject.org/files/ENCFF320OVF/@@download/ENCFF320OVF.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF679MHC bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234NVU, ENCFF391HFU 294709660 ENCODE Processing Pipeline d4d9fabc1e36606e8e08553c33b12779 https://www.encodeproject.org/files/ENCFF679MHC/@@download/ENCFF679MHC.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF233ZLL bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234NVU, ENCFF391HFU, ENCFF691BQZ, ENCFF913HVS 512968255 ENCODE Processing Pipeline ca225ac6f4421ecf361e2c6df7ac5a75 https://www.encodeproject.org/files/ENCFF233ZLL/@@download/ENCFF233ZLL.bigWig GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF349NJE bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234NVU, ENCFF391HFU, ENCFF691BQZ, ENCFF913HVS 5145036 ENCODE Processing Pipeline 7ae05f4b87eb1b8b16ceaa490a09d31d https://www.encodeproject.org/files/ENCFF349NJE/@@download/ENCFF349NJE.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF667VJC bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF691BQZ, ENCFF913HVS 4336302 ENCODE Processing Pipeline dda20a17ec0748c3d2c9adee1841e951 https://www.encodeproject.org/files/ENCFF667VJC/@@download/ENCFF667VJC.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF226OEB bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NJE 11524548 ENCODE Processing Pipeline 1dd576f82dbb6452b54c8a59229ed901 https://www.encodeproject.org/files/ENCFF226OEB/@@download/ENCFF226OEB.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF400VVQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF119XFJ 1398588 ENCODE Processing Pipeline d7d30e2198d7fad8df29b681fd0dc05d https://www.encodeproject.org/files/ENCFF400VVQ/@@download/ENCFF400VVQ.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF822CTO bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234NVU, ENCFF391HFU 3326942 ENCODE Processing Pipeline df0bd3dad982550d48aed690ce4afe47 https://www.encodeproject.org/files/ENCFF822CTO/@@download/ENCFF822CTO.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF351LVG bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF667VJC 10630133 ENCODE Processing Pipeline 3bb16d97f8236aab89219b64bc497e65 https://www.encodeproject.org/files/ENCFF351LVG/@@download/ENCFF351LVG.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF101MTI bed narrowPeak conservative idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NJE, ENCFF419RSJ, ENCFF667VJC, ENCFF822CTO 695018 ENCODE Processing Pipeline 5f488b52e2d086ba8f2d1a0a064d3b02 https://www.encodeproject.org/files/ENCFF101MTI/@@download/ENCFF101MTI.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF119XFJ bed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NJE, ENCFF419RSJ, ENCFF667VJC, ENCFF822CTO 801899 ENCODE Processing Pipeline d188231ecd51e08a69f22a2b2faf23f6 https://www.encodeproject.org/files/ENCFF119XFJ/@@download/ENCFF119XFJ.bed.gz GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF723ENR bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF822CTO 8031447 ENCODE Processing Pipeline e773346569a3af543b52531d88b93e50 https://www.encodeproject.org/files/ENCFF723ENR/@@download/ENCFF723ENR.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF170OHJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF101MTI 1255023 ENCODE Processing Pipeline bf56b75d56cea68c9bd0a4c9375af79d https://www.encodeproject.org/files/ENCFF170OHJ/@@download/ENCFF170OHJ.bigBed GRCh38 released low read depth, control low read depth, low read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF482HKO fastq reads ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF783OVZ 1494991845 Richard Myers, HAIB 0a708f3c1598b4f3d0cb6160744cd808 SRA:SRR6213042 https://www.encodeproject.org/files/ENCFF482HKO/@@download/ENCFF482HKO.fastq.gz HiSeq 2000 /files/ENCFF007TGS/ released control low read depth, antibody characterized with exemption ENCFF783OVZ fastq reads ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF482HKO 1530548579 Richard Myers, HAIB bca2d09ef91d88a7e9a06d36ce74d04d SRA:SRR6213042 https://www.encodeproject.org/files/ENCFF783OVZ/@@download/ENCFF783OVZ.fastq.gz HiSeq 2000 /files/ENCFF472CPZ/ released control low read depth, antibody characterized with exemption ENCFF013LJH bam unfiltered alignments ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF482HKO, ENCFF783OVZ, ENCFF807MUK 3576618345 ENCODE Processing Pipeline ba48c59deddcc0cf7923e70a4b3a1941 https://www.encodeproject.org/files/ENCFF013LJH/@@download/ENCFF013LJH.bam hg19 released control low read depth, antibody characterized with exemption ENCFF544NWF bam unfiltered alignments ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF482HKO, ENCFF643CGH, ENCFF783OVZ 3591256088 ENCODE Processing Pipeline c195d65e3959be0502e689aea0e9bcc5 https://www.encodeproject.org/files/ENCFF544NWF/@@download/ENCFF544NWF.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF076YOL bam alignments ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF482HKO, ENCFF783OVZ, ENCFF807MUK 2594615847 ENCODE Processing Pipeline 13ef9823617cf20414d191359d0cc0ea https://www.encodeproject.org/files/ENCFF076YOL/@@download/ENCFF076YOL.bam hg19 released control low read depth, antibody characterized with exemption ENCFF906VNO bam alignments ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF482HKO, ENCFF643CGH, ENCFF783OVZ 2598075351 ENCODE Processing Pipeline f044a3859bb2665bcd84275108773452 https://www.encodeproject.org/files/ENCFF906VNO/@@download/ENCFF906VNO.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF694TXJ bigWig signal p-value ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF906VNO 867444592 ENCODE Processing Pipeline 2d6fd2a9b00075a146b5c634e059bd34 https://www.encodeproject.org/files/ENCFF694TXJ/@@download/ENCFF694TXJ.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF621LMW bigWig fold change over control ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF906VNO 832558561 ENCODE Processing Pipeline 5a07b4351459f335a1e110880344b269 https://www.encodeproject.org/files/ENCFF621LMW/@@download/ENCFF621LMW.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF548AAT bed narrowPeak peaks ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF906VNO 4383270 ENCODE Processing Pipeline 5618d49bb6031894147c58992070bb05 https://www.encodeproject.org/files/ENCFF548AAT/@@download/ENCFF548AAT.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF676WYA bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF419RSJ, ENCFF548AAT 63883 ENCODE Processing Pipeline e51d7a081ca54b770402190d549f89a2 https://www.encodeproject.org/files/ENCFF676WYA/@@download/ENCFF676WYA.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF367FSN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF676WYA 167709 ENCODE Processing Pipeline dd69d5399dee2c3898e063b13778757b https://www.encodeproject.org/files/ENCFF367FSN/@@download/ENCFF367FSN.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF417FTY bigBed narrowPeak peaks ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF548AAT 11329096 ENCODE Processing Pipeline 1535edad429b3e222851cd6800ea2213 https://www.encodeproject.org/files/ENCFF417FTY/@@download/ENCFF417FTY.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF648GGY bigWig signal p-value ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF076YOL 865928722 ENCODE Processing Pipeline c2ad6a9443f218324f7e43468cdb3e8a https://www.encodeproject.org/files/ENCFF648GGY/@@download/ENCFF648GGY.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF417NVH bigWig fold change over control ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF076YOL 832356745 ENCODE Processing Pipeline abe681f6a08a595eb894138b71317594 https://www.encodeproject.org/files/ENCFF417NVH/@@download/ENCFF417NVH.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF200AXJ bed narrowPeak peaks ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF076YOL 4381897 ENCODE Processing Pipeline d32054bb514e263fe328dd9b6754b486 https://www.encodeproject.org/files/ENCFF200AXJ/@@download/ENCFF200AXJ.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF131QGF bigBed narrowPeak peaks ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF200AXJ 11313656 ENCODE Processing Pipeline b51ef0c56738637e6e06ba57c935ba0e https://www.encodeproject.org/files/ENCFF131QGF/@@download/ENCFF131QGF.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF294RNI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF200AXJ 65608 ENCODE Processing Pipeline 1c4ed51a73c4be9626e66e451c59e79a https://www.encodeproject.org/files/ENCFF294RNI/@@download/ENCFF294RNI.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF984LXP bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR290QBB ChIP-seq UBERON:0008952 upper lobe of left lung tissue adult male 54 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF294RNI 168747 ENCODE Processing Pipeline 271e50cade86d29b37ae60cb84544780 https://www.encodeproject.org/files/ENCFF984LXP/@@download/ENCFF984LXP.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF000OHP bam alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OIB 479060918 Richard Myers, HAIB aeafdeca34afeffba7970d1746437b81 https://www.encodeproject.org/files/ENCFF000OHP/@@download/ENCFF000OHP.bam hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OHQ bigBed broadPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZS 164881 Richard Myers, HAIB addc255cb05c9587d8f63723001a1543 https://www.encodeproject.org/files/ENCFF000OHQ/@@download/ENCFF000OHQ.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OHR bigBed broadPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZT 475943 Richard Myers, HAIB 00d50fcdff20f233f40e478a1772ee7e https://www.encodeproject.org/files/ENCFF000OHR/@@download/ENCFF000OHR.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OHS bam alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OIE 741625516 Richard Myers, HAIB 41936268d35e86c7edb054d88542c8ba https://www.encodeproject.org/files/ENCFF000OHS/@@download/ENCFF000OHS.bam hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OHT bigWig raw signal ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 1 6672649 Richard Myers, HAIB 4ee644a2426b5ae4c37767e81a3c825c https://www.encodeproject.org/files/ENCFF000OHT/@@download/ENCFF000OHT.bigWig hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OHU bigWig raw signal ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 1 20000956 Richard Myers, HAIB 1e5f5ade2f0529d8f72298f5d628f582 https://www.encodeproject.org/files/ENCFF000OHU/@@download/ENCFF000OHU.bigWig hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OIB fastq reads ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 571352763 Richard Myers, HAIB 5dc738136b4ecc6ce3db30c63a8f987b https://www.encodeproject.org/files/ENCFF000OIB/@@download/ENCFF000OIB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF000OIE fastq reads ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 782209934 Richard Myers, HAIB 1bba39d4458baccdb45aa7ecf7bea311 https://www.encodeproject.org/files/ENCFF000OIE/@@download/ENCFF000OIE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OCW/ released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001TZS bed broadPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 1 64292 Richard Myers, HAIB bde546f3725cdeb643ced0ea1d1c4fb5 https://www.encodeproject.org/files/ENCFF001TZS/@@download/ENCFF001TZS.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF001TZT bed broadPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 1 269459 Richard Myers, HAIB b6c9a338395cfb186dda4f6c240ab5fd https://www.encodeproject.org/files/ENCFF001TZT/@@download/ENCFF001TZT.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF002CIE bed narrowPeak optimal idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 96309 ENCODE Consortium Analysis Working Group 8f01b8a623b959caa7f7e25876808635 https://www.encodeproject.org/files/ENCFF002CIE/@@download/ENCFF002CIE.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity missing derived_from, NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF961WXK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE ENCFF002CIE 247605 ENCODE Consortium f3ea68cd797ea2633b5bd889341e494d https://www.encodeproject.org/files/ENCFF961WXK/@@download/ENCFF961WXK.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF039NYP bam unfiltered alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIB, ENCFF643CGH 677582740 ENCODE Processing Pipeline d3d9af71c2c46f2f96a4673184c9837b https://www.encodeproject.org/files/ENCFF039NYP/@@download/ENCFF039NYP.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF272BAG bam unfiltered alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIE, ENCFF643CGH 931234395 ENCODE Processing Pipeline 1e851ced9b5f21f5ea211fc0e4a09689 https://www.encodeproject.org/files/ENCFF272BAG/@@download/ENCFF272BAG.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF425FSK bam alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIB, ENCFF643CGH 210995610 ENCODE Processing Pipeline 31e609780d8b4c2d7a456e1d5818a461 https://www.encodeproject.org/files/ENCFF425FSK/@@download/ENCFF425FSK.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF582LPW bam alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIE, ENCFF643CGH 295221415 ENCODE Processing Pipeline 8d408f44ec95c35ee6e7edf8df7fa6a3 https://www.encodeproject.org/files/ENCFF582LPW/@@download/ENCFF582LPW.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF390ZIU bam unfiltered alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIB, ENCFF807MUK 676248749 ENCODE Processing Pipeline a3495417896b5896afc3219580c61066 https://www.encodeproject.org/files/ENCFF390ZIU/@@download/ENCFF390ZIU.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF287GUR bam alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIB, ENCFF807MUK 209093780 ENCODE Processing Pipeline d6fb4df0de636dfbac8058a69765e455 https://www.encodeproject.org/files/ENCFF287GUR/@@download/ENCFF287GUR.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF843JHA bam unfiltered alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIE, ENCFF807MUK 931165044 ENCODE Processing Pipeline 3fb714c8977bfda02658acc43f80b84b https://www.encodeproject.org/files/ENCFF843JHA/@@download/ENCFF843JHA.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF013JXB bam alignments ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIE, ENCFF807MUK 292034579 ENCODE Processing Pipeline 537f61b5912a744a8afca0b6239fdd0e https://www.encodeproject.org/files/ENCFF013JXB/@@download/ENCFF013JXB.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF727SXD bigWig signal p-value ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562HPN, ENCFF582LPW 386676570 ENCODE Processing Pipeline d82bea85edcea33ef3abd4bd9f84b820 https://www.encodeproject.org/files/ENCFF727SXD/@@download/ENCFF727SXD.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF589JAE bigWig fold change over control ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF425FSK, ENCFF562HPN 131823374 ENCODE Processing Pipeline b42c16a4c1ac1bb8d132682cfbd49d13 https://www.encodeproject.org/files/ENCFF589JAE/@@download/ENCFF589JAE.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF382FYC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF204LCG 297434 ENCODE Processing Pipeline a37874c46f7df9c7789ed731a5a413a4 https://www.encodeproject.org/files/ENCFF382FYC/@@download/ENCFF382FYC.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF315YFI bigWig signal p-value ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF425FSK, ENCFF562HPN 385923963 ENCODE Processing Pipeline 42c7444a25a295230a72758db81ddf6f https://www.encodeproject.org/files/ENCFF315YFI/@@download/ENCFF315YFI.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF292CDL bigWig fold change over control ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF425FSK, ENCFF562HPN, ENCFF582LPW 277128284 ENCODE Processing Pipeline 37b1e1dfab51e57ca643534393c3873a https://www.encodeproject.org/files/ENCFF292CDL/@@download/ENCFF292CDL.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF264KYF bed narrowPeak conservative idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF500MSV, ENCFF575AYZ, ENCFF756DWW 73920 ENCODE Processing Pipeline 20d3c705e3876667241b8fcf18ed4d4c https://www.encodeproject.org/files/ENCFF264KYF/@@download/ENCFF264KYF.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF558ZRB bigWig signal p-value ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF425FSK, ENCFF562HPN, ENCFF582LPW 413206044 ENCODE Processing Pipeline 0844e5dd5a44fbacac842e9b48250962 https://www.encodeproject.org/files/ENCFF558ZRB/@@download/ENCFF558ZRB.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF290ZCR bigWig fold change over control ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562HPN, ENCFF582LPW 177228118 ENCODE Processing Pipeline 23a3890bb7adac1ab73ab6fbaf97cb96 https://www.encodeproject.org/files/ENCFF290ZCR/@@download/ENCFF290ZCR.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF500MSV bed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF562HPN, ENCFF582LPW 4300254 ENCODE Processing Pipeline d3c92dda4b9d0ceb000f221d96147c96 https://www.encodeproject.org/files/ENCFF500MSV/@@download/ENCFF500MSV.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF950JGB bigBed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF756DWW 10585475 ENCODE Processing Pipeline 12d6a6a54994eef88ec6bfdbdb5f26c0 https://www.encodeproject.org/files/ENCFF950JGB/@@download/ENCFF950JGB.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF204LCG bed narrowPeak optimal idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF500MSV, ENCFF575AYZ, ENCFF756DWW 128551 ENCODE Processing Pipeline 2d4f6f01796a7391c0c2b82e725c8f45 https://www.encodeproject.org/files/ENCFF204LCG/@@download/ENCFF204LCG.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF575AYZ bed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF425FSK, ENCFF562HPN 1637706 ENCODE Processing Pipeline 5325688cdef02e397e3f0892bc20cf0e https://www.encodeproject.org/files/ENCFF575AYZ/@@download/ENCFF575AYZ.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF785XKO bigBed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF575AYZ 3654565 ENCODE Processing Pipeline ca277861d1cc4ade5c66d5748d92c147 https://www.encodeproject.org/files/ENCFF785XKO/@@download/ENCFF785XKO.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF212GWZ bigBed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF500MSV 9822845 ENCODE Processing Pipeline 60f68146a59844d03aae018ec4c357bb https://www.encodeproject.org/files/ENCFF212GWZ/@@download/ENCFF212GWZ.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF401FYN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF264KYF 174982 ENCODE Processing Pipeline e63c294a0e1a169b4a96bcd5828468ec https://www.encodeproject.org/files/ENCFF401FYN/@@download/ENCFF401FYN.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF756DWW bed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF425FSK, ENCFF562HPN, ENCFF582LPW 4812746 ENCODE Processing Pipeline ee6327cf5e29f4cd7d4cd779e3d781fc https://www.encodeproject.org/files/ENCFF756DWW/@@download/ENCFF756DWW.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF413OIV bigWig fold change over control ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF287GUR, ENCFF958RTR 131468412 ENCODE Processing Pipeline 0a74c9773954550d9a4a955145c68ca1 https://www.encodeproject.org/files/ENCFF413OIV/@@download/ENCFF413OIV.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF167NPM bigWig fold change over control ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF013JXB, ENCFF287GUR, ENCFF958RTR 276468858 ENCODE Processing Pipeline a752c5979a0bca0d44eac5fbd1b24b4e https://www.encodeproject.org/files/ENCFF167NPM/@@download/ENCFF167NPM.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF704LJZ bigWig signal p-value ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF013JXB, ENCFF958RTR 373717927 ENCODE Processing Pipeline 3dfbed70b031cc864e60e661ad675e2c https://www.encodeproject.org/files/ENCFF704LJZ/@@download/ENCFF704LJZ.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF630HNB bigWig signal p-value ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF013JXB, ENCFF287GUR, ENCFF958RTR 478581984 ENCODE Processing Pipeline 90f291ae97fc286157aae7d3dd02c4c3 https://www.encodeproject.org/files/ENCFF630HNB/@@download/ENCFF630HNB.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF854TVA bed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF287GUR, ENCFF958RTR 1545002 ENCODE Processing Pipeline 05c2785006b632a687acc835696a4ad6 https://www.encodeproject.org/files/ENCFF854TVA/@@download/ENCFF854TVA.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF267NGA bigBed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF723OVS 10627848 ENCODE Processing Pipeline 15f3bb8d21f96467af162d9dd05a04ac https://www.encodeproject.org/files/ENCFF267NGA/@@download/ENCFF267NGA.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF479ORW bigWig fold change over control ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF013JXB, ENCFF958RTR 175798796 ENCODE Processing Pipeline 97f178ad2c393d67f96725db6da281d0 https://www.encodeproject.org/files/ENCFF479ORW/@@download/ENCFF479ORW.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF732PLA bigBed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF066EAT 9965765 ENCODE Processing Pipeline 11f2f526d26a9af510499ad59fb9ef46 https://www.encodeproject.org/files/ENCFF732PLA/@@download/ENCFF732PLA.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF621OAS bed narrowPeak conservative idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF066EAT, ENCFF723OVS, ENCFF854TVA 68859 ENCODE Processing Pipeline 32b885f01b0590cf385232aa1872e37e https://www.encodeproject.org/files/ENCFF621OAS/@@download/ENCFF621OAS.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF997NGJ bed narrowPeak optimal idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF066EAT, ENCFF723OVS, ENCFF854TVA 126477 ENCODE Processing Pipeline 30a9b5ffb47654a81a0933837011f2b4 https://www.encodeproject.org/files/ENCFF997NGJ/@@download/ENCFF997NGJ.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF024PWA bigWig signal p-value ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF287GUR, ENCFF958RTR 351885792 ENCODE Processing Pipeline 6d9aff922c034976876db14d7c4e687b https://www.encodeproject.org/files/ENCFF024PWA/@@download/ENCFF024PWA.bigWig hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF807LKR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF621OAS 168771 ENCODE Processing Pipeline b926ce9f2fc108b8410760c3bbfc9f25 https://www.encodeproject.org/files/ENCFF807LKR/@@download/ENCFF807LKR.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF066EAT bed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF013JXB, ENCFF958RTR 4364605 ENCODE Processing Pipeline f57fb1ee83f2c3375f280090ea2961a2 https://www.encodeproject.org/files/ENCFF066EAT/@@download/ENCFF066EAT.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF723OVS bed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF013JXB, ENCFF287GUR, ENCFF958RTR 4873933 ENCODE Processing Pipeline 4d1dfff14be89ebee2669a999ae0889d https://www.encodeproject.org/files/ENCFF723OVS/@@download/ENCFF723OVS.bed.gz hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF731LCP bigBed narrowPeak peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF854TVA 2752019 ENCODE Processing Pipeline dcf981f7ee4a9e8ba6dd24b2fea76925 https://www.encodeproject.org/files/ENCFF731LCP/@@download/ENCFF731LCP.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF492JSO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BND ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens ZEB1-human ENCAB000AMO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF997NGJ 295349 ENCODE Processing Pipeline ddf74a8c6194a92340c2f3e2bbfb5740 https://www.encodeproject.org/files/ENCFF492JSO/@@download/ENCFF492JSO.bigBed hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking, moderate library complexity NTR biosample, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient read depth ENCFF976LPV fastq reads ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 1 50 single-ended 1991175803 Richard Myers, HAIB ff58a3ef3fbd01bf5ca5d55027036db5 SRA:SRR5339190 https://www.encodeproject.org/files/ENCFF976LPV/@@download/ENCFF976LPV.fastq.gz HiSeq 2000 /files/ENCFF993VKM/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF145XWH fastq reads ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 1 50 single-ended 1133790547 Richard Myers, HAIB 6e65e582ef48c41ea94fdca22364fee7 SRA:SRR5339191 https://www.encodeproject.org/files/ENCFF145XWH/@@download/ENCFF145XWH.fastq.gz HiSeq 2000 /files/ENCFF913JVQ/ released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF688UQF bam alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 50 ENCFF145XWH, ENCFF807MUK 870950465 ENCODE Processing Pipeline 5d5bfe40daf05eaf1150cd1e03e6db20 https://www.encodeproject.org/files/ENCFF688UQF/@@download/ENCFF688UQF.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF361KFD bam alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 50 ENCFF807MUK, ENCFF976LPV 1553484646 ENCODE Processing Pipeline 9730f0150ab658d9495a8477c5e3e907 https://www.encodeproject.org/files/ENCFF361KFD/@@download/ENCFF361KFD.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF142EXA bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF361KFD, ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 1237920560 ENCODE Processing Pipeline 6b5141d7be097fcafe97861b7cbbd912 https://www.encodeproject.org/files/ENCFF142EXA/@@download/ENCFF142EXA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF106WRW bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 6366354 ENCODE Processing Pipeline 87292ab1949c87c6aaaff0e84e4cf796 https://www.encodeproject.org/files/ENCFF106WRW/@@download/ENCFF106WRW.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF134OVY bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF361KFD, ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 7106902 ENCODE Processing Pipeline 82477c0d9e81006cd37be7bcac866750 https://www.encodeproject.org/files/ENCFF134OVY/@@download/ENCFF134OVY.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF260TNQ bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF604XWK 13327494 ENCODE Processing Pipeline 7e1f288850acef71ad725b81a94cf0e7 https://www.encodeproject.org/files/ENCFF260TNQ/@@download/ENCFF260TNQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF723HLA bigBed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF712AXK 852224 ENCODE Processing Pipeline b4e0f71242a503b01ec23125bd06e2d9 https://www.encodeproject.org/files/ENCFF723HLA/@@download/ENCFF723HLA.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF625WOU bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 897184444 ENCODE Processing Pipeline 0dbb780638c27528c2d3fd3038f0ee5c https://www.encodeproject.org/files/ENCFF625WOU/@@download/ENCFF625WOU.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF771LDJ bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF361KFD, ENCFF444TNY, ENCFF847YDJ 1083279801 ENCODE Processing Pipeline 6f8019099fed8b4e893453ac47d71e3a https://www.encodeproject.org/files/ENCFF771LDJ/@@download/ENCFF771LDJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF858HYY bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF134OVY 13341332 ENCODE Processing Pipeline 2435bc697ab619a1807eec5d78072b83 https://www.encodeproject.org/files/ENCFF858HYY/@@download/ENCFF858HYY.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF510ZUJ bed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF106WRW, ENCFF134OVY, ENCFF604XWK 290077 ENCODE Processing Pipeline 854bcc3923d7bcf9c470288133d1a39a https://www.encodeproject.org/files/ENCFF510ZUJ/@@download/ENCFF510ZUJ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF777AHA bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 655277915 ENCODE Processing Pipeline f4aea5eb3007b1a9ef063ddd7e09b54b https://www.encodeproject.org/files/ENCFF777AHA/@@download/ENCFF777AHA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF426QHL bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF361KFD, ENCFF444TNY, ENCFF847YDJ 971095580 ENCODE Processing Pipeline f4aeee2573c3ac9024a049c2be05ec22 https://www.encodeproject.org/files/ENCFF426QHL/@@download/ENCFF426QHL.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF604XWK bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF361KFD, ENCFF444TNY, ENCFF847YDJ 6853798 ENCODE Processing Pipeline 0ce20453e7cc72bebc28e6ce7dddc3cf https://www.encodeproject.org/files/ENCFF604XWK/@@download/ENCFF604XWK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF744AIV bigBed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF510ZUJ 543381 ENCODE Processing Pipeline fa429c141a48a91f14e48f085d0347f2 https://www.encodeproject.org/files/ENCFF744AIV/@@download/ENCFF744AIV.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF712AXK bed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF106WRW, ENCFF134OVY, ENCFF604XWK 402996 ENCODE Processing Pipeline d4ef75a204c84efaad5df40feb9c957b https://www.encodeproject.org/files/ENCFF712AXK/@@download/ENCFF712AXK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF162UCA bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF361KFD, ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 1067290088 ENCODE Processing Pipeline 7125f2c195e0597d7f02b623f4d1680f https://www.encodeproject.org/files/ENCFF162UCA/@@download/ENCFF162UCA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF859UMJ bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF106WRW 13429133 ENCODE Processing Pipeline f7a395a2634ad7c049da2aca9b5aedad https://www.encodeproject.org/files/ENCFF859UMJ/@@download/ENCFF859UMJ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF127WCS bam unfiltered alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 50 ENCFF643CGH, ENCFF976LPV 2144928174 ENCODE Processing Pipeline 5619dfdb9c1860af0895bb7d28766e14 https://www.encodeproject.org/files/ENCFF127WCS/@@download/ENCFF127WCS.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF173BBS bam unfiltered alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 50 ENCFF145XWH, ENCFF643CGH 1206302915 ENCODE Processing Pipeline 1fba86e86a196b71baef94983b3fc670 https://www.encodeproject.org/files/ENCFF173BBS/@@download/ENCFF173BBS.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF908MXL bam alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 50 ENCFF145XWH, ENCFF643CGH 870323233 ENCODE Processing Pipeline 388367b292ba90d799e6979265467ccf https://www.encodeproject.org/files/ENCFF908MXL/@@download/ENCFF908MXL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF507UJN bam alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 50 ENCFF643CGH, ENCFF976LPV 1552861162 ENCODE Processing Pipeline acf33d519bd6b83854332dc830c71747 https://www.encodeproject.org/files/ENCFF507UJN/@@download/ENCFF507UJN.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF897FKL bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF908MXL 979694991 ENCODE Processing Pipeline 7844d1eba988ca9906b6dc630cbaa640 https://www.encodeproject.org/files/ENCFF897FKL/@@download/ENCFF897FKL.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF818QUH bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN 1081490730 ENCODE Processing Pipeline 0b1a6c874696af9bc53c78366dab868c https://www.encodeproject.org/files/ENCFF818QUH/@@download/ENCFF818QUH.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF342EIJ bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN, ENCFF908MXL 1112930840 ENCODE Processing Pipeline 084af16c8404bb02a449107791487392 https://www.encodeproject.org/files/ENCFF342EIJ/@@download/ENCFF342EIJ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF950ICC bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF908MXL 665114073 ENCODE Processing Pipeline 0fc42eb35b7228c89786349cd1152d9b https://www.encodeproject.org/files/ENCFF950ICC/@@download/ENCFF950ICC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF071PTI bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN 988742064 ENCODE Processing Pipeline 4b7132e14f36e9e13740b77b5ea1a3ba https://www.encodeproject.org/files/ENCFF071PTI/@@download/ENCFF071PTI.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF745IWH bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN, ENCFF908MXL 1260257715 ENCODE Processing Pipeline 0d50f01270cfd5e8e1c7d579c6907d5c https://www.encodeproject.org/files/ENCFF745IWH/@@download/ENCFF745IWH.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF316RDN bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF908MXL 6196811 ENCODE Processing Pipeline 999516396eec2cde6ea1b7a2f132c990 https://www.encodeproject.org/files/ENCFF316RDN/@@download/ENCFF316RDN.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF951LYB bed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF316RDN, ENCFF419RSJ, ENCFF526CVF, ENCFF864BPS 289679 ENCODE Processing Pipeline 133cad071ec1f2d8337e4f02f3575215 https://www.encodeproject.org/files/ENCFF951LYB/@@download/ENCFF951LYB.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF526CVF bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN 6743951 ENCODE Processing Pipeline 5cf4d36156dd1ec9a6f7b50c46b31fcb https://www.encodeproject.org/files/ENCFF526CVF/@@download/ENCFF526CVF.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF864BPS bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN, ENCFF908MXL 7005842 ENCODE Processing Pipeline 5be9c56718d6ad65f3f2adf8ad6240f2 https://www.encodeproject.org/files/ENCFF864BPS/@@download/ENCFF864BPS.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF417JQB bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF526CVF 13329462 ENCODE Processing Pipeline 9cae20f683bd954b59e2c6e8f5f13196 https://www.encodeproject.org/files/ENCFF417JQB/@@download/ENCFF417JQB.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF205QHL bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF316RDN 13415421 ENCODE Processing Pipeline e8ac445b27ca593a24cb65587a3fede0 https://www.encodeproject.org/files/ENCFF205QHL/@@download/ENCFF205QHL.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF485ZCG bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF864BPS 13360968 ENCODE Processing Pipeline d01b96c7ca80cc010cc47f4b6c2f5361 https://www.encodeproject.org/files/ENCFF485ZCG/@@download/ENCFF485ZCG.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF194VBK bed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF316RDN, ENCFF419RSJ, ENCFF526CVF, ENCFF864BPS 405789 ENCODE Processing Pipeline 851d5f8c99376f6433641934c9eeeb00 https://www.encodeproject.org/files/ENCFF194VBK/@@download/ENCFF194VBK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF635MTS bigBed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF194VBK 858369 ENCODE Processing Pipeline 9a5f019fcbfcbf5a28285f1e29474834 https://www.encodeproject.org/files/ENCFF635MTS/@@download/ENCFF635MTS.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF863GGM bigBed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF951LYB 544274 ENCODE Processing Pipeline 84fe2c515beb54418daabbfa8b1ce0f4 https://www.encodeproject.org/files/ENCFF863GGM/@@download/ENCFF863GGM.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF379ZPU fastq reads ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1690922156 Richard Myers, HAIB 3bd1e62df98375562adbcdf50ecce66c SRA:SRR5339519 https://www.encodeproject.org/files/ENCFF379ZPU/@@download/ENCFF379ZPU.fastq.gz HiSeq 2000 /files/ENCFF598SBH/ released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF002XBK fastq reads ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1379169647 Richard Myers, HAIB 79bd79cb4459b489a5a912701e282073 SRA:SRR5339520 https://www.encodeproject.org/files/ENCFF002XBK/@@download/ENCFF002XBK.fastq.gz HiSeq 2000 /files/ENCFF180PND/ released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF415ELX bam alignments ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF002XBK, ENCFF807MUK 1044519136 ENCODE Processing Pipeline 13e6683d64d2588547b5a1eb39ee29d3 https://www.encodeproject.org/files/ENCFF415ELX/@@download/ENCFF415ELX.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF273TMW bam alignments ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF379ZPU, ENCFF807MUK 1148336341 ENCODE Processing Pipeline e5f429085ec94ae3ee92992d61f14d79 https://www.encodeproject.org/files/ENCFF273TMW/@@download/ENCFF273TMW.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF572EMD bigWig signal p-value ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF273TMW, ENCFF313NWV 686901085 ENCODE Processing Pipeline e076e3b0bf0b0ff5b4b99684bf7dba88 https://www.encodeproject.org/files/ENCFF572EMD/@@download/ENCFF572EMD.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF807BAZ bigWig signal p-value ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF415ELX, ENCFF935ZWS 716568593 ENCODE Processing Pipeline f49ecb872d3a8d6b9da0e64e68e54274 https://www.encodeproject.org/files/ENCFF807BAZ/@@download/ENCFF807BAZ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF435WMH bigWig signal p-value ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF273TMW, ENCFF313NWV, ENCFF415ELX, ENCFF935ZWS 1291186435 ENCODE Processing Pipeline a83f49eb5de13ada4aba41624f060346 https://www.encodeproject.org/files/ENCFF435WMH/@@download/ENCFF435WMH.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF661UGV bigWig fold change over control ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF273TMW, ENCFF313NWV 598412374 ENCODE Processing Pipeline 533aaa9e343547610c3430bfa6ee2992 https://www.encodeproject.org/files/ENCFF661UGV/@@download/ENCFF661UGV.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF903YLG bigWig fold change over control ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF415ELX, ENCFF935ZWS 588780231 ENCODE Processing Pipeline 2850243a46a8b593eced3400add1b6ed https://www.encodeproject.org/files/ENCFF903YLG/@@download/ENCFF903YLG.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF967YUJ bigBed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF332JOV 13480172 ENCODE Processing Pipeline 79c1eae63b6903f735f5d6d8d63df578 https://www.encodeproject.org/files/ENCFF967YUJ/@@download/ENCFF967YUJ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF671XIQ bigBed narrowPeak conservative idr thresholded peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF784PEF 1175008 ENCODE Processing Pipeline 4474ba8b4203dd859f42e1f9b8db0680 https://www.encodeproject.org/files/ENCFF671XIQ/@@download/ENCFF671XIQ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF294GPL bed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF273TMW, ENCFF313NWV, ENCFF415ELX, ENCFF935ZWS 7002346 ENCODE Processing Pipeline 57c3414a49c09072108ead425ced593a https://www.encodeproject.org/files/ENCFF294GPL/@@download/ENCFF294GPL.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF332JOV bed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF273TMW, ENCFF313NWV 5852019 ENCODE Processing Pipeline 808c26e98d7e74b9fb8bd0df63eea746 https://www.encodeproject.org/files/ENCFF332JOV/@@download/ENCFF332JOV.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF329YKA bigBed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF236WSQ 13545874 ENCODE Processing Pipeline ea69c3ab961b672893a39aa6a0cf98e4 https://www.encodeproject.org/files/ENCFF329YKA/@@download/ENCFF329YKA.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF784PEF bed narrowPeak conservative idr thresholded peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF236WSQ, ENCFF294GPL, ENCFF332JOV 553142 ENCODE Processing Pipeline 3fede0783916eef96e713883690d0993 https://www.encodeproject.org/files/ENCFF784PEF/@@download/ENCFF784PEF.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF313QLM bigBed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF294GPL 13704133 ENCODE Processing Pipeline 00c5b76ff0fb8559ab1c1a07cf17f051 https://www.encodeproject.org/files/ENCFF313QLM/@@download/ENCFF313QLM.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF939TZS bed narrowPeak optimal idr thresholded peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF236WSQ, ENCFF294GPL, ENCFF332JOV 594939 ENCODE Processing Pipeline 9d4f96a2a04e052aa45a02e3702c33d5 https://www.encodeproject.org/files/ENCFF939TZS/@@download/ENCFF939TZS.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF516MDP bigBed narrowPeak optimal idr thresholded peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF939TZS 1241908 ENCODE Processing Pipeline c5cbd883b9a734e9d33c646a37524702 https://www.encodeproject.org/files/ENCFF516MDP/@@download/ENCFF516MDP.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF278JRW bigWig fold change over control ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF273TMW, ENCFF313NWV, ENCFF415ELX, ENCFF935ZWS 1315338945 ENCODE Processing Pipeline 98f381465547f867df11f8f74213aa71 https://www.encodeproject.org/files/ENCFF278JRW/@@download/ENCFF278JRW.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF236WSQ bed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF415ELX, ENCFF935ZWS 6119134 ENCODE Processing Pipeline e972082cf7848136ad3c323f39055b78 https://www.encodeproject.org/files/ENCFF236WSQ/@@download/ENCFF236WSQ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF572AQI bam unfiltered alignments ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 50 ENCFF379ZPU, ENCFF643CGH 1765664463 ENCODE Processing Pipeline 744db70b2321e2a6161b6f3defd8ea1c https://www.encodeproject.org/files/ENCFF572AQI/@@download/ENCFF572AQI.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF183GKO bam unfiltered alignments ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 50 ENCFF002XBK, ENCFF643CGH 1476671553 ENCODE Processing Pipeline c7a7ab776d57cd142326961979d73731 https://www.encodeproject.org/files/ENCFF183GKO/@@download/ENCFF183GKO.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF465ZPQ bam alignments ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 50 ENCFF379ZPU, ENCFF643CGH 1151670716 ENCODE Processing Pipeline b1ed6d3b88ae5bd9fc09e70c56fc1a6f https://www.encodeproject.org/files/ENCFF465ZPQ/@@download/ENCFF465ZPQ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF009WRQ bam alignments ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 50 ENCFF002XBK, ENCFF643CGH 1050161016 ENCODE Processing Pipeline 98efca49ee786c5f38b4b45f4f9716aa https://www.encodeproject.org/files/ENCFF009WRQ/@@download/ENCFF009WRQ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF956GRK bigWig signal p-value ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF409OXD, ENCFF465ZPQ 748069996 ENCODE Processing Pipeline 1dd39bfdedba61fba4359f8513d3fa6f https://www.encodeproject.org/files/ENCFF956GRK/@@download/ENCFF956GRK.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF875BIJ bigWig signal p-value ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF009WRQ, ENCFF940GKZ 715737259 ENCODE Processing Pipeline 1c2b69e61f53dfdcf9d508ee8481d9b2 https://www.encodeproject.org/files/ENCFF875BIJ/@@download/ENCFF875BIJ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF843GAN bigWig signal p-value ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF009WRQ, ENCFF409OXD, ENCFF465ZPQ, ENCFF940GKZ 1193664818 ENCODE Processing Pipeline e3a5f006f533b3f7d29362e8eed2199f https://www.encodeproject.org/files/ENCFF843GAN/@@download/ENCFF843GAN.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF667CYC bigWig fold change over control ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF409OXD, ENCFF465ZPQ 609421846 ENCODE Processing Pipeline a1581a46624eab27496fdb69c0bf5c7a https://www.encodeproject.org/files/ENCFF667CYC/@@download/ENCFF667CYC.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF698JDC bigWig fold change over control ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF009WRQ, ENCFF940GKZ 587572536 ENCODE Processing Pipeline a6ef54172f1e49843bf9969c73b1ee5c https://www.encodeproject.org/files/ENCFF698JDC/@@download/ENCFF698JDC.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF103OHX bigWig fold change over control ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF009WRQ, ENCFF409OXD, ENCFF465ZPQ, ENCFF940GKZ 1346129858 ENCODE Processing Pipeline e518b760ece2dc56781c97948fd9d14f https://www.encodeproject.org/files/ENCFF103OHX/@@download/ENCFF103OHX.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF115HCB bed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF409OXD, ENCFF465ZPQ 5814715 ENCODE Processing Pipeline 7b7a0e2a554d7a6a0a2261d08595b38a https://www.encodeproject.org/files/ENCFF115HCB/@@download/ENCFF115HCB.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF585LFG bed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF009WRQ, ENCFF940GKZ 5939451 ENCODE Processing Pipeline 1ec1151ca0bf5d10fc35d8ebcbab1c66 https://www.encodeproject.org/files/ENCFF585LFG/@@download/ENCFF585LFG.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF646YJW bed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF009WRQ, ENCFF409OXD, ENCFF465ZPQ, ENCFF940GKZ 6919654 ENCODE Processing Pipeline 5add5e3a7b2e26dff90242ad7e5fcb42 https://www.encodeproject.org/files/ENCFF646YJW/@@download/ENCFF646YJW.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF850EJW bigBed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1 ENCFF115HCB 13599075 ENCODE Processing Pipeline 0f1f6dd901fdfcddbbe926f5c0995412 https://www.encodeproject.org/files/ENCFF850EJW/@@download/ENCFF850EJW.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF113UYL bigBed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 2 ENCFF585LFG 13523381 ENCODE Processing Pipeline cbc09ffba8204ebde58def3bdc7dfe3e https://www.encodeproject.org/files/ENCFF113UYL/@@download/ENCFF113UYL.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF563ZIK bigBed narrowPeak conservative idr thresholded peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF935SBO 1190633 ENCODE Processing Pipeline 14a9676ceb8d816b0fcc262068ace45d https://www.encodeproject.org/files/ENCFF563ZIK/@@download/ENCFF563ZIK.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF008RIO bigBed narrowPeak peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF646YJW 13724077 ENCODE Processing Pipeline 086f259266b0987ec2175cc3caffc149 https://www.encodeproject.org/files/ENCFF008RIO/@@download/ENCFF008RIO.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF935SBO bed narrowPeak conservative idr thresholded peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF115HCB, ENCFF419RSJ, ENCFF585LFG, ENCFF646YJW 563905 ENCODE Processing Pipeline 9df854f466cd9ea7800dc670ef4bd312 https://www.encodeproject.org/files/ENCFF935SBO/@@download/ENCFF935SBO.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF478XNA bed narrowPeak optimal idr thresholded peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF115HCB, ENCFF419RSJ, ENCFF585LFG, ENCFF646YJW 613896 ENCODE Processing Pipeline 37798933b9716f7e18da22a18a547aea https://www.encodeproject.org/files/ENCFF478XNA/@@download/ENCFF478XNA.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF141XLD bigBed narrowPeak optimal idr thresholded peaks ENCSR897MMC ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-06-13 ENCODE 1, 2 ENCFF478XNA 1269379 ENCODE Processing Pipeline 5800fe22a92b70e77416c652da408210 https://www.encodeproject.org/files/ENCFF141XLD/@@download/ENCFF141XLD.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking missing unfiltered alignments ENCFF682QTO fastq reads ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 1 ENCFF203YAZ 2578187417 Richard Myers, HAIB 96a218cd6de9302af510c3d274e8498f SRA:SRR6212896 https://www.encodeproject.org/files/ENCFF682QTO/@@download/ENCFF682QTO.fastq.gz HiSeq 2000 /files/ENCFF224JZM/ released antibody characterized with exemption ENCFF203YAZ fastq reads ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 1 76 paired-ended 2 ENCFF682QTO 2699289678 Richard Myers, HAIB 5377a2d07b1e25b17092e5bded64907e SRA:SRR6212896 https://www.encodeproject.org/files/ENCFF203YAZ/@@download/ENCFF203YAZ.fastq.gz HiSeq 2000 /files/ENCFF151KQH/ released antibody characterized with exemption ENCFF324FZX bam unfiltered alignments ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF203YAZ, ENCFF682QTO, ENCFF807MUK 6293284058 ENCODE Processing Pipeline 5da7a9cd5da833ea62e7d476dd9eed06 https://www.encodeproject.org/files/ENCFF324FZX/@@download/ENCFF324FZX.bam hg19 released antibody characterized with exemption ENCFF734WEC bam unfiltered alignments ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF203YAZ, ENCFF643CGH, ENCFF682QTO 6320054477 ENCODE Processing Pipeline a9c317b6f61f9fb790c532ec152cd541 https://www.encodeproject.org/files/ENCFF734WEC/@@download/ENCFF734WEC.bam GRCh38 released antibody characterized with exemption ENCFF855BDE bam alignments ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF203YAZ, ENCFF643CGH, ENCFF682QTO 4531020984 ENCODE Processing Pipeline 4a7099cc1c9ce48ab5f0af71dbeef096 https://www.encodeproject.org/files/ENCFF855BDE/@@download/ENCFF855BDE.bam GRCh38 released antibody characterized with exemption ENCFF408OZV bam alignments ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 76 ENCFF203YAZ, ENCFF682QTO, ENCFF807MUK 4526180642 ENCODE Processing Pipeline 79a3757a976b0e1991c07671d30ddf94 https://www.encodeproject.org/files/ENCFF408OZV/@@download/ENCFF408OZV.bam hg19 released antibody characterized with exemption ENCFF106FOU bigWig signal p-value ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF855BDE 1816184477 ENCODE Processing Pipeline 958df3ed022ec2006f16cbf786a46c28 https://www.encodeproject.org/files/ENCFF106FOU/@@download/ENCFF106FOU.bigWig GRCh38 released antibody characterized with exemption ENCFF353YJE bigWig fold change over control ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF855BDE 1841941371 ENCODE Processing Pipeline 18094bc6afacde687974736bae628f67 https://www.encodeproject.org/files/ENCFF353YJE/@@download/ENCFF353YJE.bigWig GRCh38 released antibody characterized with exemption ENCFF220JFI bed narrowPeak peaks ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF855BDE 6142495 ENCODE Processing Pipeline c396c6984deeabbde44902f1d32a3d1d https://www.encodeproject.org/files/ENCFF220JFI/@@download/ENCFF220JFI.bed.gz GRCh38 released antibody characterized with exemption ENCFF434LHU bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF904COM 25677 ENCODE Processing Pipeline caa78386b8a8b9d68916ff4f4d25b230 https://www.encodeproject.org/files/ENCFF434LHU/@@download/ENCFF434LHU.bigBed GRCh38 released antibody characterized with exemption ENCFF904COM bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF220JFI, ENCFF419RSJ 1771 ENCODE Processing Pipeline f9a805f8e02b10dd630ec46db7418a15 https://www.encodeproject.org/files/ENCFF904COM/@@download/ENCFF904COM.bed.gz GRCh38 released antibody characterized with exemption ENCFF006OGD bigBed narrowPeak peaks ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF220JFI 11849930 ENCODE Processing Pipeline 629b2bdc7d4aefb077bec931a549eeda https://www.encodeproject.org/files/ENCFF006OGD/@@download/ENCFF006OGD.bigBed GRCh38 released antibody characterized with exemption ENCFF426ZVM bigWig signal p-value ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF408OZV 1741916655 ENCODE Processing Pipeline c06e5eb1da68c9768676ba751b41bbb9 https://www.encodeproject.org/files/ENCFF426ZVM/@@download/ENCFF426ZVM.bigWig hg19 released antibody characterized with exemption ENCFF730SMH bed narrowPeak peaks ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF408OZV 6134577 ENCODE Processing Pipeline 6712d118be7895dc696877572c87883d https://www.encodeproject.org/files/ENCFF730SMH/@@download/ENCFF730SMH.bed.gz hg19 released antibody characterized with exemption ENCFF403WRV bigBed narrowPeak peaks ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF730SMH 11830326 ENCODE Processing Pipeline 5d8fa9eeb854a1787a996c07d860bc6e https://www.encodeproject.org/files/ENCFF403WRV/@@download/ENCFF403WRV.bigBed hg19 released antibody characterized with exemption ENCFF479QKT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF243XHX 17708 ENCODE Processing Pipeline 6f621fe9ee5374d3b5d844f05947aa91 https://www.encodeproject.org/files/ENCFF479QKT/@@download/ENCFF479QKT.bigBed hg19 released antibody characterized with exemption ENCFF008LVL bigWig fold change over control ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF408OZV 1840836290 ENCODE Processing Pipeline 7171483d9e58efc733795f896bb0fdf1 https://www.encodeproject.org/files/ENCFF008LVL/@@download/ENCFF008LVL.bigWig hg19 released antibody characterized with exemption ENCFF243XHX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR228ZPZ ChIP-seq UBERON:0000945 stomach tissue adult male 37 year Homo sapiens EP300-human ENCAB284TTY DNA see document formaldehyde False 2017-06-15 ENCODE 1 ENCFF001TDO, ENCFF730SMH 1644 ENCODE Processing Pipeline fd7a8b58b5d3168335dedfe70da5efbe https://www.encodeproject.org/files/ENCFF243XHX/@@download/ENCFF243XHX.bed.gz hg19 released antibody characterized with exemption ENCFF000PIG bam alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PIT 1066164995 Richard Myers, HAIB 33b725e2093086d17ce547f8cec4fd40 https://www.encodeproject.org/files/ENCFF000PIG/@@download/ENCFF000PIG.bam hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PIH bigBed broadPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFY 291359 Richard Myers, HAIB d4fe996d20b901452f110dcf3ad495b8 https://www.encodeproject.org/files/ENCFF000PIH/@@download/ENCFF000PIH.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PII bigBed broadPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFZ 1441383 Richard Myers, HAIB 1afff2651e774c01c534d2c3880ae277 https://www.encodeproject.org/files/ENCFF000PII/@@download/ENCFF000PII.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PIK bam alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PIX 1452978125 Richard Myers, HAIB 1eb2b3b1cb2c8cdd59449663356082c6 https://www.encodeproject.org/files/ENCFF000PIK/@@download/ENCFF000PIK.bam hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PIL bigWig raw signal ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 1 20900705 Richard Myers, HAIB f2013a0bde8b3f6390d06be1520ccb0c https://www.encodeproject.org/files/ENCFF000PIL/@@download/ENCFF000PIL.bigWig hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PIN bigWig raw signal ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 1 62757232 Richard Myers, HAIB 0fbabca07083d671b316b0dbc383124a https://www.encodeproject.org/files/ENCFF000PIN/@@download/ENCFF000PIN.bigWig hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PIT fastq reads ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1372327574 Richard Myers, HAIB eea37e5bc31b00f24e3adf835cc59422 https://www.encodeproject.org/files/ENCFF000PIT/@@download/ENCFF000PIT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000PIX fastq reads ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1488538075 Richard Myers, HAIB 88d3520ad57d8498495b293578bbbfed https://www.encodeproject.org/files/ENCFF000PIX/@@download/ENCFF000PIX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF001UFY bed broadPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 1 147760 Richard Myers, HAIB 40e689b797475c7017681e89379425f0 https://www.encodeproject.org/files/ENCFF001UFY/@@download/ENCFF001UFY.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF001UFZ bed broadPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 1 1017974 Richard Myers, HAIB f6952c75da9e1b45d80e491957fb5738 https://www.encodeproject.org/files/ENCFF001UFZ/@@download/ENCFF001UFZ.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF002CKK bed narrowPeak optimal idr thresholded peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 809761 ENCODE Consortium Analysis Working Group 5840d498651082c22423bec2c0e12365 https://www.encodeproject.org/files/ENCFF002CKK/@@download/ENCFF002CKK.bed.gz hg19 archived low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF601TBX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE ENCFF002CKK 1685076 ENCODE Consortium 50a4e7d1b7b7740893d567bde10fc065 https://www.encodeproject.org/files/ENCFF601TBX/@@download/ENCFF601TBX.bigBed hg19 archived low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF753YDG bam unfiltered alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIT, ENCFF643CGH 1511372637 ENCODE Processing Pipeline e49ed92684437e01572704e671243925 https://www.encodeproject.org/files/ENCFF753YDG/@@download/ENCFF753YDG.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF576IPP bam alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIT, ENCFF643CGH 305648366 ENCODE Processing Pipeline 8edcde826c0022c81729d1c40dede8fd https://www.encodeproject.org/files/ENCFF576IPP/@@download/ENCFF576IPP.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF933ITF bam alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PIX, ENCFF643CGH 1154832818 ENCODE Processing Pipeline 12800ef7bff25b722667920f9a97c1ea https://www.encodeproject.org/files/ENCFF933ITF/@@download/ENCFF933ITF.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF078CHP bam unfiltered alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PIX, ENCFF643CGH 1881186199 ENCODE Processing Pipeline c1ed4d8ed10735c42fb845889d6942db https://www.encodeproject.org/files/ENCFF078CHP/@@download/ENCFF078CHP.bam GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF649KHR bam unfiltered alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIT, ENCFF807MUK 1509611295 ENCODE Processing Pipeline 1c8c192d867f819fec341683453cdb26 https://www.encodeproject.org/files/ENCFF649KHR/@@download/ENCFF649KHR.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF771TCH bam alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PIT, ENCFF807MUK 305723292 ENCODE Processing Pipeline 0c037da151b1947d7cad7bfdf361c4b5 https://www.encodeproject.org/files/ENCFF771TCH/@@download/ENCFF771TCH.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF194PQZ bam alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PIX, ENCFF807MUK 1155280736 ENCODE Processing Pipeline f07273c0f0242afcfc7c704551c4a16a https://www.encodeproject.org/files/ENCFF194PQZ/@@download/ENCFF194PQZ.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF134QDF bam unfiltered alignments ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PIX, ENCFF807MUK 1876010612 ENCODE Processing Pipeline 36a37530edcf8a8bf07eaad00ac74008 https://www.encodeproject.org/files/ENCFF134QDF/@@download/ENCFF134QDF.bam hg19 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF504PVA bigWig signal p-value ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF576IPP 318096523 ENCODE Processing Pipeline 1fc79097f1165fae22dfbfe3bdae136b https://www.encodeproject.org/files/ENCFF504PVA/@@download/ENCFF504PVA.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF129HNH bigWig signal p-value ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF933ITF 576924681 ENCODE Processing Pipeline 897f868a0e54234563dc79f1689712fd https://www.encodeproject.org/files/ENCFF129HNH/@@download/ENCFF129HNH.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF561BPO bigWig signal p-value ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF576IPP, ENCFF933ITF 589008911 ENCODE Processing Pipeline f545c01833058ab1c03e00fd33223962 https://www.encodeproject.org/files/ENCFF561BPO/@@download/ENCFF561BPO.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF511UEV bigWig fold change over control ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF576IPP 211984360 ENCODE Processing Pipeline abe457f3f0bf43468a19236901ff356f https://www.encodeproject.org/files/ENCFF511UEV/@@download/ENCFF511UEV.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF108WYP bigWig fold change over control ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF933ITF 495574115 ENCODE Processing Pipeline e82212692dfe61c3dd3be4f0b3a3d0b6 https://www.encodeproject.org/files/ENCFF108WYP/@@download/ENCFF108WYP.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF888KEW bed narrowPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF285LVE, ENCFF933ITF 5658409 ENCODE Processing Pipeline 3ba4c0d889d12351d98cf0c9a7bc39ad https://www.encodeproject.org/files/ENCFF888KEW/@@download/ENCFF888KEW.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF626IVY bigWig fold change over control ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF576IPP, ENCFF933ITF 591041108 ENCODE Processing Pipeline ef6e8d9c80172cdec4f0a8a1ca04dde7 https://www.encodeproject.org/files/ENCFF626IVY/@@download/ENCFF626IVY.bigWig GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF069BYU bed narrowPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF285LVE, ENCFF576IPP, ENCFF933ITF 5860985 ENCODE Processing Pipeline d687ccb5971f0e1a95b38713982ec839 https://www.encodeproject.org/files/ENCFF069BYU/@@download/ENCFF069BYU.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF400VLN bed narrowPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF576IPP 4366806 ENCODE Processing Pipeline db2248196da1aef2691efbbc0ce66906 https://www.encodeproject.org/files/ENCFF400VLN/@@download/ENCFF400VLN.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF437IJR bigBed narrowPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1 ENCFF400VLN 10650338 ENCODE Processing Pipeline 4f67b4d49812473889a0dbd43d4d4d69 https://www.encodeproject.org/files/ENCFF437IJR/@@download/ENCFF437IJR.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF190ZUF bigBed narrowPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF069BYU 11378072 ENCODE Processing Pipeline 4782150735ddbe2077292548603c592f https://www.encodeproject.org/files/ENCFF190ZUF/@@download/ENCFF190ZUF.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF184NAC bed narrowPeak optimal idr thresholded peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF069BYU, ENCFF400VLN, ENCFF419RSJ, ENCFF888KEW 814091 ENCODE Processing Pipeline e688e2befa08fc9a26117f772428ff3b https://www.encodeproject.org/files/ENCFF184NAC/@@download/ENCFF184NAC.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF246NLC bigBed narrowPeak peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 2 ENCFF888KEW 11390868 ENCODE Processing Pipeline d5d1bffd9784d6dde84cc8878c0c6413 https://www.encodeproject.org/files/ENCFF246NLC/@@download/ENCFF246NLC.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF010NID bed narrowPeak conservative idr thresholded peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF069BYU, ENCFF400VLN, ENCFF419RSJ, ENCFF888KEW 290074 ENCODE Processing Pipeline 2c61f2560a6a75e98d4291638e172426 https://www.encodeproject.org/files/ENCFF010NID/@@download/ENCFF010NID.bed.gz GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF829SRC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF010NID 622372 ENCODE Processing Pipeline 5edf3c9f2cc7a7d5107f2dba6dcbb559 https://www.encodeproject.org/files/ENCFF829SRC/@@download/ENCFF829SRC.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF362WNO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FOXA2-human ENCAB000AGO DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184NAC 1669402 ENCODE Processing Pipeline c1c5cbfc20e2d5e796279b3ff7e4b0f5 https://www.encodeproject.org/files/ENCFF362WNO/@@download/ENCFF362WNO.bigBed GRCh38 released low read length, mild to moderate bottlenecking biological replicates with identical biosample poor library complexity, severe bottlenecking, insufficient replicate concordance, insufficient read depth ENCFF000NHJ bam alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000NHV 443386970 Richard Myers, HAIB 82621bc9a0f6f5aff203a938fcfb8cb5 https://www.encodeproject.org/files/ENCFF000NHJ/@@download/ENCFF000NHJ.bam hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHK bigBed broadPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TTR 346267 Richard Myers, HAIB e4d27d82343a85ef83950792d91819d4 https://www.encodeproject.org/files/ENCFF000NHK/@@download/ENCFF000NHK.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHL bigBed broadPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TTS 100657 Richard Myers, HAIB 9922d274854bc8e494abbb76d04dbec2 https://www.encodeproject.org/files/ENCFF000NHL/@@download/ENCFF000NHL.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHN bam alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000NHY 1823535677 Richard Myers, HAIB 35636a63a087f3a74d72575fcb5bb4b1 https://www.encodeproject.org/files/ENCFF000NHN/@@download/ENCFF000NHN.bam hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHO bigWig raw signal ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 26996531 Richard Myers, HAIB 4397442ab89425398b27cc788597b3a1 https://www.encodeproject.org/files/ENCFF000NHO/@@download/ENCFF000NHO.bigWig hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NHQ bigWig raw signal ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 9856577 Richard Myers, HAIB 36310fae2015033960d46cc2f6357183 https://www.encodeproject.org/files/ENCFF000NHQ/@@download/ENCFF000NHQ.bigWig hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000NHV fastq reads ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1271663267 Richard Myers, HAIB 7cd71bc1f29f8a7a850a4772729f9f9b https://www.encodeproject.org/files/ENCFF000NHV/@@download/ENCFF000NHV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000NHY fastq reads ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1818683208 Richard Myers, HAIB 89d632bdc39c37a41ecb6ffac8ed4530 https://www.encodeproject.org/files/ENCFF000NHY/@@download/ENCFF000NHY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001TTR bed broadPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 1 182425 Richard Myers, HAIB ea6e3ccbac867e4a0b2b77c6c7020d6c https://www.encodeproject.org/files/ENCFF001TTR/@@download/ENCFF001TTR.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001TTS bed broadPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 1 25666 Richard Myers, HAIB bc5c13fa241de7419e42673cf5a06724 https://www.encodeproject.org/files/ENCFF001TTS/@@download/ENCFF001TTS.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CGA bed narrowPeak optimal idr thresholded peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 214826 ENCODE Consortium Analysis Working Group e55575f1e1335ada6952246bd80535a1 https://www.encodeproject.org/files/ENCFF002CGA/@@download/ENCFF002CGA.bed.gz hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF163TTA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE ENCFF002CGA 564584 ENCODE Consortium 4e4b7a0737682ecc93b5f62062f76c3f https://www.encodeproject.org/files/ENCFF163TTA/@@download/ENCFF163TTA.bigBed hg19 archived borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF573ZKI bam unfiltered alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHV, ENCFF643CGH 1551558981 ENCODE Processing Pipeline c8bd5a57974396e195962e9713538235 https://www.encodeproject.org/files/ENCFF573ZKI/@@download/ENCFF573ZKI.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF887OBL bam alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHV, ENCFF643CGH 887469491 ENCODE Processing Pipeline a40936bbf06fd5147cee95edab2f33e5 https://www.encodeproject.org/files/ENCFF887OBL/@@download/ENCFF887OBL.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF313TEK bam alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHY, ENCFF643CGH 976394281 ENCODE Processing Pipeline aeb1d0a2a0b03c75ccf363930b5d15a3 https://www.encodeproject.org/files/ENCFF313TEK/@@download/ENCFF313TEK.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF934YHX bam unfiltered alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHY, ENCFF643CGH 1986537461 ENCODE Processing Pipeline e87117985ec4970c2ac81605f8f1f576 https://www.encodeproject.org/files/ENCFF934YHX/@@download/ENCFF934YHX.bam GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF641TAY bam unfiltered alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHY, ENCFF807MUK 1978116310 ENCODE Processing Pipeline 053f14f386117fc23961cf30a4fe4e95 https://www.encodeproject.org/files/ENCFF641TAY/@@download/ENCFF641TAY.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF063CUX bam unfiltered alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHV, ENCFF807MUK 1545984171 ENCODE Processing Pipeline 1ad92435fa3aea21ced4d3889d0829c5 https://www.encodeproject.org/files/ENCFF063CUX/@@download/ENCFF063CUX.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF225AWF bam alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000NHV, ENCFF807MUK 887667431 ENCODE Processing Pipeline 883b4fa1b59093541292b91a0376a36c https://www.encodeproject.org/files/ENCFF225AWF/@@download/ENCFF225AWF.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF535SPI bam alignments ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000NHY, ENCFF807MUK 976440852 ENCODE Processing Pipeline b467bab79361638347c1afaaf2d6cd62 https://www.encodeproject.org/files/ENCFF535SPI/@@download/ENCFF535SPI.bam hg19 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF580WSM bigWig signal p-value ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF887OBL 669986450 ENCODE Processing Pipeline 2f48ae89648efe62cb29d4ef2d0fbc2b https://www.encodeproject.org/files/ENCFF580WSM/@@download/ENCFF580WSM.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF712FKS bigWig signal p-value ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF313TEK, ENCFF656HEF 512278780 ENCODE Processing Pipeline 21eca28d351c64f3f31e4bdadbccb30f https://www.encodeproject.org/files/ENCFF712FKS/@@download/ENCFF712FKS.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF053MVA bigWig signal p-value ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313TEK, ENCFF656HEF, ENCFF887OBL 861918825 ENCODE Processing Pipeline 1297822f95863ee05eabcc57fca541ff https://www.encodeproject.org/files/ENCFF053MVA/@@download/ENCFF053MVA.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF925DJC bigWig fold change over control ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF887OBL 550119323 ENCODE Processing Pipeline 50a6c017ac29d4730b86a65f82042ee3 https://www.encodeproject.org/files/ENCFF925DJC/@@download/ENCFF925DJC.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF941BCJ bigWig fold change over control ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF313TEK, ENCFF656HEF 453100132 ENCODE Processing Pipeline 85ebfec716c75f79efc8da97af2233b9 https://www.encodeproject.org/files/ENCFF941BCJ/@@download/ENCFF941BCJ.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF743OPE bed narrowPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF313TEK, ENCFF656HEF 4739304 ENCODE Processing Pipeline d8d962dfb9f0d401e22ef426a7801a29 https://www.encodeproject.org/files/ENCFF743OPE/@@download/ENCFF743OPE.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF649XJK bigBed narrowPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF306TFR 13031473 ENCODE Processing Pipeline 39db1ff8c7d326113b81b884bc6c3615 https://www.encodeproject.org/files/ENCFF649XJK/@@download/ENCFF649XJK.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF618STH bigWig fold change over control ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313TEK, ENCFF656HEF, ENCFF887OBL 872408881 ENCODE Processing Pipeline d83ee5d775c3a42dbfd720d2578c65b9 https://www.encodeproject.org/files/ENCFF618STH/@@download/ENCFF618STH.bigWig GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF306TFR bed narrowPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1 ENCFF656HEF, ENCFF887OBL 6310615 ENCODE Processing Pipeline a5963044a8402479f02fd59321a02694 https://www.encodeproject.org/files/ENCFF306TFR/@@download/ENCFF306TFR.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF479NTI bed narrowPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313TEK, ENCFF656HEF, ENCFF887OBL 6767311 ENCODE Processing Pipeline f367e1bd5d9d81de9d2c78645ed2bd1c https://www.encodeproject.org/files/ENCFF479NTI/@@download/ENCFF479NTI.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF886KDK bed narrowPeak optimal idr thresholded peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF306TFR, ENCFF419RSJ, ENCFF479NTI, ENCFF743OPE 303699 ENCODE Processing Pipeline a709217d99f3705d7b0ccc08c73499e1 https://www.encodeproject.org/files/ENCFF886KDK/@@download/ENCFF886KDK.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF132BYW bigBed narrowPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF479NTI 13247942 ENCODE Processing Pipeline 08daceaa68e4163be81cd8925c7cac51 https://www.encodeproject.org/files/ENCFF132BYW/@@download/ENCFF132BYW.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF205ZPE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF886KDK 766357 ENCODE Processing Pipeline 709771b0a33bddf39856dd93b56211c1 https://www.encodeproject.org/files/ENCFF205ZPE/@@download/ENCFF205ZPE.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF044AQT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF353WKC 556463 ENCODE Processing Pipeline 8ff18b9d9fb653824f1883c185724170 https://www.encodeproject.org/files/ENCFF044AQT/@@download/ENCFF044AQT.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF750SDQ bigBed narrowPeak peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 2 ENCFF743OPE 11094785 ENCODE Processing Pipeline ea8b572940578dd73734c0c23f52feb3 https://www.encodeproject.org/files/ENCFF750SDQ/@@download/ENCFF750SDQ.bigBed GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF353WKC bed narrowPeak conservative idr thresholded peaks ENCSR000BPF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol TAF1-human ENCAB000ALM DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF306TFR, ENCFF419RSJ, ENCFF479NTI, ENCFF743OPE 197108 ENCODE Processing Pipeline 2bda3bc942b5ba57a68099aa68f1b6f0 https://www.encodeproject.org/files/ENCFF353WKC/@@download/ENCFF353WKC.bed.gz GRCh38 released borderline replicate concordance, low read length, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RGZ bam alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000RHM 853958319 Richard Myers, HAIB c40d2b199cdb076d832360507213c655 https://www.encodeproject.org/files/ENCFF000RGZ/@@download/ENCFF000RGZ.bam hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000RHA bigBed broadPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001URD 134666 Richard Myers, HAIB 333a760781f40c60770e1eeada9668b4 https://www.encodeproject.org/files/ENCFF000RHA/@@download/ENCFF000RHA.bigBed hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000RHB bigBed broadPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001URE 141461 Richard Myers, HAIB 299d2123e378eba348bedf7eaf421750 https://www.encodeproject.org/files/ENCFF000RHB/@@download/ENCFF000RHB.bigBed hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000RHC bam alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000RHO 1075889668 Richard Myers, HAIB ffbe757fef6c39d74c5ed1f82f60dcbc https://www.encodeproject.org/files/ENCFF000RHC/@@download/ENCFF000RHC.bam hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000RHE bigWig raw signal ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 1 7667101 Richard Myers, HAIB 9dfc1ad1e4494cf69eb0a3bf093837a5 https://www.encodeproject.org/files/ENCFF000RHE/@@download/ENCFF000RHE.bigWig hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000RHG bigWig raw signal ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 1 9419624 Richard Myers, HAIB 831f730b385fc5447e009a32c5ab899e https://www.encodeproject.org/files/ENCFF000RHG/@@download/ENCFF000RHG.bigWig hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF000RHM fastq reads ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 757210595 Richard Myers, HAIB 15aa54b2f95f7e90404fb2c36ef9c376 https://www.encodeproject.org/files/ENCFF000RHM/@@download/ENCFF000RHM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RHV/ released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF000RHO fastq reads ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 928138846 Richard Myers, HAIB ef6f3c6c4406d76ea33d7f5d43bf42f7 https://www.encodeproject.org/files/ENCFF000RHO/@@download/ENCFF000RHO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RHW/ released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF001URD bed broadPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 1 44488 Richard Myers, HAIB 4319ffc936656a1a2d76a5b05b358d53 https://www.encodeproject.org/files/ENCFF001URD/@@download/ENCFF001URD.bed.gz hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF001URE bed broadPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 1 52241 Richard Myers, HAIB bfad9ad0d0f1ed987b8745c4e8671396 https://www.encodeproject.org/files/ENCFF001URE/@@download/ENCFF001URE.bed.gz hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CNU bed narrowPeak optimal idr thresholded peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 106459 ENCODE Consortium Analysis Working Group a86dcd18070158bf29fd91d8da95f8dc https://www.encodeproject.org/files/ENCFF002CNU/@@download/ENCFF002CNU.bed.gz hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth missing derived_from, biological replicates with identical biosample ENCFF408GTT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE ENCFF002CNU 348100 ENCODE Consortium b72283d714be5dfcaa1f4a227fe4b237 https://www.encodeproject.org/files/ENCFF408GTT/@@download/ENCFF408GTT.bigBed hg19 archived mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF784CCE bam alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RHM, ENCFF643CGH 585835530 ENCODE Processing Pipeline 511e2444d15459920efc4620c1f064b6 https://www.encodeproject.org/files/ENCFF784CCE/@@download/ENCFF784CCE.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF231RDV bam alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RHO, ENCFF643CGH 806886189 ENCODE Processing Pipeline 9ac9ff9cf88c8e8c5ce4ef1a978c47d2 https://www.encodeproject.org/files/ENCFF231RDV/@@download/ENCFF231RDV.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF294MUM bam unfiltered alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RHM, ENCFF643CGH 1050520982 ENCODE Processing Pipeline bdeaba6a24170d4a4ef4247ee59c2f17 https://www.encodeproject.org/files/ENCFF294MUM/@@download/ENCFF294MUM.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF825VBO bam unfiltered alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RHO, ENCFF643CGH 1329589283 ENCODE Processing Pipeline fefc183ac831beb57e2ec546c7921ba5 https://www.encodeproject.org/files/ENCFF825VBO/@@download/ENCFF825VBO.bam GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF874QPH bam unfiltered alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RHM, ENCFF807MUK 1042612475 ENCODE Processing Pipeline cc8d97b5f17475093e627ab6bfe39dd7 https://www.encodeproject.org/files/ENCFF874QPH/@@download/ENCFF874QPH.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF334WOO bam alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RHM, ENCFF807MUK 586122360 ENCODE Processing Pipeline 427a9501e58aa320adfb0f999dd4e733 https://www.encodeproject.org/files/ENCFF334WOO/@@download/ENCFF334WOO.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF690QBI bam alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RHO, ENCFF807MUK 807155802 ENCODE Processing Pipeline 183c6a0e12e149ceb7f9e02ee3c79457 https://www.encodeproject.org/files/ENCFF690QBI/@@download/ENCFF690QBI.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF232IAQ bam unfiltered alignments ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RHO, ENCFF807MUK 1318567509 ENCODE Processing Pipeline 3d013a16b5c30c23409f440b3f299022 https://www.encodeproject.org/files/ENCFF232IAQ/@@download/ENCFF232IAQ.bam hg19 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF814TZO bigWig signal p-value ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF406KPS, ENCFF414YAT, ENCFF784CCE 436924146 ENCODE Processing Pipeline e16dbf2d3de4f75a2cf9f1e4edef65a0 https://www.encodeproject.org/files/ENCFF814TZO/@@download/ENCFF814TZO.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF830HMN bigWig signal p-value ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF231RDV, ENCFF406KPS 248412938 ENCODE Processing Pipeline 009b899039a3526c7ad43c5b6135fa59 https://www.encodeproject.org/files/ENCFF830HMN/@@download/ENCFF830HMN.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF581KRT bigWig fold change over control ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF231RDV, ENCFF406KPS 378505598 ENCODE Processing Pipeline 003606e03d233f4f37a8256d268320a7 https://www.encodeproject.org/files/ENCFF581KRT/@@download/ENCFF581KRT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF946QMM bigWig fold change over control ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF406KPS, ENCFF414YAT, ENCFF784CCE 350204725 ENCODE Processing Pipeline 2ea8ddcee47db516a18b39f45545faec https://www.encodeproject.org/files/ENCFF946QMM/@@download/ENCFF946QMM.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF699ZTC bigWig signal p-value ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF231RDV, ENCFF406KPS, ENCFF414YAT, ENCFF784CCE 543804126 ENCODE Processing Pipeline fa2a8e029220f1659187958921e0c326 https://www.encodeproject.org/files/ENCFF699ZTC/@@download/ENCFF699ZTC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF373MQA bigWig fold change over control ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF231RDV, ENCFF406KPS, ENCFF414YAT, ENCFF784CCE 696686743 ENCODE Processing Pipeline 3897bb2aa5d57c43534de53e0a7aeb57 https://www.encodeproject.org/files/ENCFF373MQA/@@download/ENCFF373MQA.bigWig GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF702PXM bed narrowPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF406KPS, ENCFF414YAT, ENCFF784CCE 4006053 ENCODE Processing Pipeline ced6ae468ad2753da7fdcafaa6f2c8bd https://www.encodeproject.org/files/ENCFF702PXM/@@download/ENCFF702PXM.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF961DYG bed narrowPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF231RDV, ENCFF406KPS 3965102 ENCODE Processing Pipeline 905b71b233bdaf2077c73b9feab55d9e https://www.encodeproject.org/files/ENCFF961DYG/@@download/ENCFF961DYG.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF147EOZ bed narrowPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF231RDV, ENCFF406KPS, ENCFF414YAT, ENCFF784CCE 4910486 ENCODE Processing Pipeline a73ef5d4850f83eee17cdd018a79126c https://www.encodeproject.org/files/ENCFF147EOZ/@@download/ENCFF147EOZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF076VQW bigBed narrowPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1 ENCFF702PXM 10375845 ENCODE Processing Pipeline 07738ffb2d499ecd27e9c05509ed996d https://www.encodeproject.org/files/ENCFF076VQW/@@download/ENCFF076VQW.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF637WCT bed narrowPeak optimal idr thresholded peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF147EOZ, ENCFF419RSJ, ENCFF702PXM, ENCFF961DYG 78905 ENCODE Processing Pipeline fe91500d281df99f56582da702cf9afa https://www.encodeproject.org/files/ENCFF637WCT/@@download/ENCFF637WCT.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF033ESZ bigBed narrowPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF147EOZ 11057020 ENCODE Processing Pipeline 19833492c0a852f1a5a1f644e95f4c0f https://www.encodeproject.org/files/ENCFF033ESZ/@@download/ENCFF033ESZ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF649ZND bigBed narrowPeak peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 2 ENCFF961DYG 10177710 ENCODE Processing Pipeline f6917388d3ad21df595f88199778a654 https://www.encodeproject.org/files/ENCFF649ZND/@@download/ENCFF649ZND.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF138KWB bed narrowPeak conservative idr thresholded peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF147EOZ, ENCFF419RSJ, ENCFF702PXM, ENCFF961DYG 54814 ENCODE Processing Pipeline 62d35a84aa5d78e8848d8741a2b65808 https://www.encodeproject.org/files/ENCFF138KWB/@@download/ENCFF138KWB.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF594NYB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF138KWB 143933 ENCODE Processing Pipeline e9bb340fc6fe48f81e2314c2b632205c https://www.encodeproject.org/files/ENCFF594NYB/@@download/ENCFF594NYB.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF378JVL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQD ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens bisphenol A ESR1-human ENCAB000AGD DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF637WCT 209975 ENCODE Processing Pipeline a3eabd70f803566b4420043ee25fb965 https://www.encodeproject.org/files/ENCFF378JVL/@@download/ENCFF378JVL.bigBed GRCh38 released mild to moderate bottlenecking, low read length, inconsistent target of control experiment, low read depth biological replicates with identical biosample ENCFF372LTI fastq reads ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1667799612 Richard Myers, HAIB c567c797ea599cad1a9bc87479d73f90 SRA:SRR5338818 https://www.encodeproject.org/files/ENCFF372LTI/@@download/ENCFF372LTI.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF061MRR fastq reads ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1346440312 Richard Myers, HAIB 086c6798cad29485f37fc44475aa645f SRA:SRR5338819 https://www.encodeproject.org/files/ENCFF061MRR/@@download/ENCFF061MRR.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF203MXG bam unfiltered alignments ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF061MRR, ENCFF643CGH 1433156705 ENCODE Processing Pipeline 80ef960c76760b314140a8cf5b34d15d https://www.encodeproject.org/files/ENCFF203MXG/@@download/ENCFF203MXG.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF740CQC bam unfiltered alignments ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF372LTI, ENCFF643CGH 1817088567 ENCODE Processing Pipeline c75f867d8bffa185645535137656d1ae https://www.encodeproject.org/files/ENCFF740CQC/@@download/ENCFF740CQC.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF106AZQ bam unfiltered alignments ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF372LTI, ENCFF807MUK 1812255220 ENCODE Processing Pipeline d8b70163c998df11a74f2620b28080ac https://www.encodeproject.org/files/ENCFF106AZQ/@@download/ENCFF106AZQ.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF844WNO bam unfiltered alignments ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF061MRR, ENCFF807MUK 1430868694 ENCODE Processing Pipeline 3f7330f5ba96a8f12ca392c4b1d61ede https://www.encodeproject.org/files/ENCFF844WNO/@@download/ENCFF844WNO.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF047TEL bam alignments ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF061MRR, ENCFF643CGH 1095449706 ENCODE Processing Pipeline 7a1f655b6da97f7662a7af7b934cee3a https://www.encodeproject.org/files/ENCFF047TEL/@@download/ENCFF047TEL.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF901MSA bam alignments ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF372LTI, ENCFF643CGH 1374690962 ENCODE Processing Pipeline 86fbfc1503423f7697bc086998f5ab3f https://www.encodeproject.org/files/ENCFF901MSA/@@download/ENCFF901MSA.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF229FNO bam alignments ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF372LTI, ENCFF807MUK 1373618882 ENCODE Processing Pipeline 2aef3b9eee4c65c9cfa4753aa0e35a6a https://www.encodeproject.org/files/ENCFF229FNO/@@download/ENCFF229FNO.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF054DOO bam alignments ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF061MRR, ENCFF807MUK 1095074823 ENCODE Processing Pipeline 8ff6d6a837219c3a152fa0c0b3c5f6a6 https://www.encodeproject.org/files/ENCFF054DOO/@@download/ENCFF054DOO.bam hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF343LPH bigWig signal p-value ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF047TEL 496527818 ENCODE Processing Pipeline 468ec65507292bc8880538f49fa9dc31 https://www.encodeproject.org/files/ENCFF343LPH/@@download/ENCFF343LPH.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF291XEC bigWig signal p-value ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF047TEL, ENCFF901MSA 681342375 ENCODE Processing Pipeline 06dfa2b0ea868de48455d91f917d56e0 https://www.encodeproject.org/files/ENCFF291XEC/@@download/ENCFF291XEC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF644DUZ bigWig signal p-value ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF901MSA 656033062 ENCODE Processing Pipeline 9ee9cb6477f95be423ad9e272ad88124 https://www.encodeproject.org/files/ENCFF644DUZ/@@download/ENCFF644DUZ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF206HKL bigWig fold change over control ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF901MSA 509292227 ENCODE Processing Pipeline 9638f6e2779f7315db75ad331ef284e7 https://www.encodeproject.org/files/ENCFF206HKL/@@download/ENCFF206HKL.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF774BPK bigWig fold change over control ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF047TEL 433372382 ENCODE Processing Pipeline 56fbc2155144434cd184066eb0bf3ff4 https://www.encodeproject.org/files/ENCFF774BPK/@@download/ENCFF774BPK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF120NLZ bigWig fold change over control ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF047TEL, ENCFF901MSA 793625600 ENCODE Processing Pipeline 32d747ffbbca7ae73065bfac16f4eba7 https://www.encodeproject.org/files/ENCFF120NLZ/@@download/ENCFF120NLZ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF003BNZ bed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF047TEL 5825013 ENCODE Processing Pipeline 5f057e86f61d50ebc6720b4e43187ef4 https://www.encodeproject.org/files/ENCFF003BNZ/@@download/ENCFF003BNZ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF897NDM bed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF047TEL, ENCFF901MSA 6391328 ENCODE Processing Pipeline de8833f6e83f274fa739284aaa8bbe98 https://www.encodeproject.org/files/ENCFF897NDM/@@download/ENCFF897NDM.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF487JWC bed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF901MSA 5074835 ENCODE Processing Pipeline 9034dc9224253d9c2850db77f0d25fba https://www.encodeproject.org/files/ENCFF487JWC/@@download/ENCFF487JWC.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF279PDV bigBed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF487JWC 11124585 ENCODE Processing Pipeline 0b33d15bc0c7b4cc9ab71358e0a3c47d https://www.encodeproject.org/files/ENCFF279PDV/@@download/ENCFF279PDV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF006FQA bigBed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF003BNZ 13025506 ENCODE Processing Pipeline 8accefd4210a7e841aad5d2c2f4d3b45 https://www.encodeproject.org/files/ENCFF006FQA/@@download/ENCFF006FQA.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF852VOW bigBed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF897NDM 13341971 ENCODE Processing Pipeline c85d953286cf3c305271595bec8c328a https://www.encodeproject.org/files/ENCFF852VOW/@@download/ENCFF852VOW.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF260DMD bed narrowPeak conservative idr thresholded peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF003BNZ, ENCFF419RSJ, ENCFF487JWC, ENCFF897NDM 199498 ENCODE Processing Pipeline 2d23de196ad4991815a4ac86b94eb240 https://www.encodeproject.org/files/ENCFF260DMD/@@download/ENCFF260DMD.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF450SOR bigBed narrowPeak conservative idr thresholded peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF260DMD 421335 ENCODE Processing Pipeline dfbed168c34e6768330c2d5bde2241bc https://www.encodeproject.org/files/ENCFF450SOR/@@download/ENCFF450SOR.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF761HIZ bed narrowPeak optimal idr thresholded peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF003BNZ, ENCFF419RSJ, ENCFF487JWC, ENCFF897NDM 283764 ENCODE Processing Pipeline 2439adff029be0bbda115279fb8ffdee https://www.encodeproject.org/files/ENCFF761HIZ/@@download/ENCFF761HIZ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF999AZX bigBed narrowPeak optimal idr thresholded peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF761HIZ 537513 ENCODE Processing Pipeline 53d619aa714d8753f7e3e45c3c194473 https://www.encodeproject.org/files/ENCFF999AZX/@@download/ENCFF999AZX.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF983UZN bigWig signal p-value ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF054DOO, ENCFF203ABR 1090908353 ENCODE Processing Pipeline d6373925e861d150795c90f17947fea7 https://www.encodeproject.org/files/ENCFF983UZN/@@download/ENCFF983UZN.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF647GRU bigWig signal p-value ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF229FNO 1180066958 ENCODE Processing Pipeline 6da00514f732eecfd51ee7142a13e743 https://www.encodeproject.org/files/ENCFF647GRU/@@download/ENCFF647GRU.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF475VFG bigWig fold change over control ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF054DOO, ENCFF203ABR 822665688 ENCODE Processing Pipeline a6c5fd2576edc2dc224c2610f62ed5af https://www.encodeproject.org/files/ENCFF475VFG/@@download/ENCFF475VFG.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF143KET bigWig signal p-value ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF054DOO, ENCFF203ABR, ENCFF229FNO 1341460719 ENCODE Processing Pipeline 528edd1407a7eacefa1584e5fae90bb3 https://www.encodeproject.org/files/ENCFF143KET/@@download/ENCFF143KET.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF738SEX bigWig fold change over control ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF229FNO 938083558 ENCODE Processing Pipeline 7b84337d28b18d453c9107f53c4d0145 https://www.encodeproject.org/files/ENCFF738SEX/@@download/ENCFF738SEX.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF509VMF bigWig fold change over control ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF054DOO, ENCFF203ABR, ENCFF229FNO 1397033413 ENCODE Processing Pipeline f296b986ad9c387923466f51e8086fe3 https://www.encodeproject.org/files/ENCFF509VMF/@@download/ENCFF509VMF.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF321SGB bed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF054DOO, ENCFF203ABR 6551829 ENCODE Processing Pipeline c143228d4d5a01de8a82a3a624d1f32e https://www.encodeproject.org/files/ENCFF321SGB/@@download/ENCFF321SGB.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF494IEN bed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF229FNO 5964459 ENCODE Processing Pipeline 4e82e7399dff5dd67cb91e195f21589b https://www.encodeproject.org/files/ENCFF494IEN/@@download/ENCFF494IEN.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF307BCB bed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF054DOO, ENCFF203ABR, ENCFF229FNO 6877974 ENCODE Processing Pipeline 20177e4c9299ffa4d287740fc9e79c37 https://www.encodeproject.org/files/ENCFF307BCB/@@download/ENCFF307BCB.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF845IXQ bigBed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF321SGB 13150337 ENCODE Processing Pipeline 0824719d881109a623a875acd9cd37b0 https://www.encodeproject.org/files/ENCFF845IXQ/@@download/ENCFF845IXQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF209ZDV bigBed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF494IEN 11456437 ENCODE Processing Pipeline aa79463742da7170ab69f3c5e1ba3325 https://www.encodeproject.org/files/ENCFF209ZDV/@@download/ENCFF209ZDV.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF675PJC bigBed narrowPeak peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF307BCB 13347637 ENCODE Processing Pipeline aa9cf122f9fd2474087593764b343f97 https://www.encodeproject.org/files/ENCFF675PJC/@@download/ENCFF675PJC.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF680TTG bigBed narrowPeak conservative idr thresholded peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF090HSK 429123 ENCODE Processing Pipeline d6d4a5738f39184c06fd5cc60ce74f41 https://www.encodeproject.org/files/ENCFF680TTG/@@download/ENCFF680TTG.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF090HSK bed narrowPeak conservative idr thresholded peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF307BCB, ENCFF321SGB, ENCFF494IEN 197883 ENCODE Processing Pipeline 8f07585c26f97642edcfabb3a4473b19 https://www.encodeproject.org/files/ENCFF090HSK/@@download/ENCFF090HSK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF262NLN bed narrowPeak optimal idr thresholded peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF307BCB, ENCFF321SGB, ENCFF494IEN 267714 ENCODE Processing Pipeline 02b377ad2dacf738d5216e2c01733a4c https://www.encodeproject.org/files/ENCFF262NLN/@@download/ENCFF262NLN.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF106AUB bigBed narrowPeak optimal idr thresholded peaks ENCSR502GAX ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF652-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF262NLN 524096 ENCODE Processing Pipeline 13421f0eb8bc6b99401ba1516bfdd95d https://www.encodeproject.org/files/ENCFF106AUB/@@download/ENCFF106AUB.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption, low read depth ENCFF772XOL fastq reads ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2052561483 Richard Myers, HAIB 7ca4ec68cc5cf76741cc5493c8554e7f SRA:SRR5339198 https://www.encodeproject.org/files/ENCFF772XOL/@@download/ENCFF772XOL.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF257FGF fastq reads ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1592664435 Richard Myers, HAIB 1177fb09546359b83a3f78a87966e391 SRA:SRR5339199 https://www.encodeproject.org/files/ENCFF257FGF/@@download/ENCFF257FGF.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF005GGK bam unfiltered alignments ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF772XOL 2379338935 ENCODE Processing Pipeline 89f0741e5705c40ac4307b812c983d27 https://www.encodeproject.org/files/ENCFF005GGK/@@download/ENCFF005GGK.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF175ENQ bam unfiltered alignments ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF257FGF, ENCFF643CGH 1697577956 ENCODE Processing Pipeline 1c1133b26b6a9cc848d4186c2e1f4bbd https://www.encodeproject.org/files/ENCFF175ENQ/@@download/ENCFF175ENQ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF301OFL bam unfiltered alignments ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF257FGF, ENCFF807MUK 1694750901 ENCODE Processing Pipeline f35131a5d5d97f5ef58ea2b08ec78cc3 https://www.encodeproject.org/files/ENCFF301OFL/@@download/ENCFF301OFL.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF197SIO bam unfiltered alignments ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF772XOL, ENCFF807MUK 2373894236 ENCODE Processing Pipeline 43bac4414452889307a4dc9ad542494a https://www.encodeproject.org/files/ENCFF197SIO/@@download/ENCFF197SIO.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF584VTC bam alignments ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF257FGF, ENCFF807MUK 1300329468 ENCODE Processing Pipeline cb4ea872ced408d65f6d33ec445b2b5a https://www.encodeproject.org/files/ENCFF584VTC/@@download/ENCFF584VTC.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF088RTW bam alignments ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF257FGF, ENCFF643CGH 1300735578 ENCODE Processing Pipeline 9fbca789b484a329bab1a78072441688 https://www.encodeproject.org/files/ENCFF088RTW/@@download/ENCFF088RTW.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF894JTR bam alignments ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF772XOL 1741304919 ENCODE Processing Pipeline 4fe1c5f3c9a07fd3834195ebfd623e64 https://www.encodeproject.org/files/ENCFF894JTR/@@download/ENCFF894JTR.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF079UPJ bam alignments ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF772XOL, ENCFF807MUK 1740457709 ENCODE Processing Pipeline c15381f696699727cdeadcea5dca24dc https://www.encodeproject.org/files/ENCFF079UPJ/@@download/ENCFF079UPJ.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF531UAK bigWig signal p-value ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF894JTR 607804470 ENCODE Processing Pipeline f2d2a9695a07698ac2c0423d1a2eded0 https://www.encodeproject.org/files/ENCFF531UAK/@@download/ENCFF531UAK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF718NCZ bigWig signal p-value ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF088RTW 506123231 ENCODE Processing Pipeline 141d9d230c2b90bf8ad3cb42a683680c https://www.encodeproject.org/files/ENCFF718NCZ/@@download/ENCFF718NCZ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF408JUT bigWig signal p-value ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF088RTW, ENCFF894JTR 647688435 ENCODE Processing Pipeline b6ebc542d75fa60d8eee0e24cfd93443 https://www.encodeproject.org/files/ENCFF408JUT/@@download/ENCFF408JUT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF368NID bigWig fold change over control ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF894JTR 596455054 ENCODE Processing Pipeline ca8ca1775c7c2e63f79dec4d6b62448c https://www.encodeproject.org/files/ENCFF368NID/@@download/ENCFF368NID.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF430PKR bigWig fold change over control ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF088RTW 450805526 ENCODE Processing Pipeline 9efa35ca83f9f4be951d19de58e0654d https://www.encodeproject.org/files/ENCFF430PKR/@@download/ENCFF430PKR.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF175PRM bigWig fold change over control ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF088RTW, ENCFF894JTR 892876256 ENCODE Processing Pipeline 0276a5be335fb6639d7a02a0d8442021 https://www.encodeproject.org/files/ENCFF175PRM/@@download/ENCFF175PRM.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF940KEW bed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF088RTW 6129997 ENCODE Processing Pipeline 918595ba7d785787dffe8c024649f03a https://www.encodeproject.org/files/ENCFF940KEW/@@download/ENCFF940KEW.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF345JAM bed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF894JTR 6581595 ENCODE Processing Pipeline eb3031206e90210a1f9d4cd5ee90d347 https://www.encodeproject.org/files/ENCFF345JAM/@@download/ENCFF345JAM.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF124SQG bed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF088RTW, ENCFF894JTR 6939979 ENCODE Processing Pipeline a734c40a1488e3399d47944b39f93821 https://www.encodeproject.org/files/ENCFF124SQG/@@download/ENCFF124SQG.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF620XDI bigBed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF345JAM 13010720 ENCODE Processing Pipeline 2d9b072516a1b080bbcd1ab1e3c79d53 https://www.encodeproject.org/files/ENCFF620XDI/@@download/ENCFF620XDI.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF208LYX bigBed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF940KEW 13041312 ENCODE Processing Pipeline 8bfa50866945e9089cc63596b413a4e8 https://www.encodeproject.org/files/ENCFF208LYX/@@download/ENCFF208LYX.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF853OMG bigBed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF124SQG 12907378 ENCODE Processing Pipeline f37e11d1b47d151882f1f800411d8a89 https://www.encodeproject.org/files/ENCFF853OMG/@@download/ENCFF853OMG.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF405THA bed narrowPeak conservative idr thresholded peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF124SQG, ENCFF345JAM, ENCFF419RSJ, ENCFF940KEW 340282 ENCODE Processing Pipeline 7694ffe68fdba01848aba7bf428ce815 https://www.encodeproject.org/files/ENCFF405THA/@@download/ENCFF405THA.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF782DLB bigBed narrowPeak conservative idr thresholded peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF405THA 682147 ENCODE Processing Pipeline e66f75ef043d3684929a5ce555b0b14c https://www.encodeproject.org/files/ENCFF782DLB/@@download/ENCFF782DLB.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF673YDK bed narrowPeak optimal idr thresholded peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF124SQG, ENCFF345JAM, ENCFF419RSJ, ENCFF940KEW 364742 ENCODE Processing Pipeline 82f0ee017c3c441a3b8de8a4866ed71c https://www.encodeproject.org/files/ENCFF673YDK/@@download/ENCFF673YDK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF284JCS bigBed narrowPeak optimal idr thresholded peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF673YDK 720516 ENCODE Processing Pipeline 441655e1bbc62c0f47e52f9684fe0416 https://www.encodeproject.org/files/ENCFF284JCS/@@download/ENCFF284JCS.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF955QUM bigWig signal p-value ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF079UPJ, ENCFF203ABR 1326667366 ENCODE Processing Pipeline 0f34d4672c4f68f209f70d3162da9d37 https://www.encodeproject.org/files/ENCFF955QUM/@@download/ENCFF955QUM.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF974PKV bigWig signal p-value ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF584VTC 1169760886 ENCODE Processing Pipeline 9b70eda2637a5f484056518be1b945aa https://www.encodeproject.org/files/ENCFF974PKV/@@download/ENCFF974PKV.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF706EXT bigWig signal p-value ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF079UPJ, ENCFF203ABR, ENCFF584VTC 1439780493 ENCODE Processing Pipeline 35c82610310dda66704182f3e4f7f599 https://www.encodeproject.org/files/ENCFF706EXT/@@download/ENCFF706EXT.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF447EGU bigWig fold change over control ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF079UPJ, ENCFF203ABR 1196583948 ENCODE Processing Pipeline 3bcad3ea625d01ab9f703075ee17822c https://www.encodeproject.org/files/ENCFF447EGU/@@download/ENCFF447EGU.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF520JGR bigWig fold change over control ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF584VTC 847045441 ENCODE Processing Pipeline a98267069152f5b6110de31ce575830c https://www.encodeproject.org/files/ENCFF520JGR/@@download/ENCFF520JGR.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF874XIR bigWig fold change over control ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF079UPJ, ENCFF203ABR, ENCFF584VTC 1468432047 ENCODE Processing Pipeline 9ef8f0beaca2558b1f96106b5a2a2349 https://www.encodeproject.org/files/ENCFF874XIR/@@download/ENCFF874XIR.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF187DLY bed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF584VTC 6797422 ENCODE Processing Pipeline e100c3be710d0933684a970579295886 https://www.encodeproject.org/files/ENCFF187DLY/@@download/ENCFF187DLY.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF262AAT bed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF079UPJ, ENCFF203ABR 7043889 ENCODE Processing Pipeline 727707af6fce1e3371442eb5d1f9829f https://www.encodeproject.org/files/ENCFF262AAT/@@download/ENCFF262AAT.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF680GWJ bed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF079UPJ, ENCFF203ABR, ENCFF584VTC 7198586 ENCODE Processing Pipeline 29b4cc2515239f90ec13db9d3c5a935b https://www.encodeproject.org/files/ENCFF680GWJ/@@download/ENCFF680GWJ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF564UZL bigBed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF262AAT 12912121 ENCODE Processing Pipeline f86a4c145bc3df0d0378d36a44baa67b https://www.encodeproject.org/files/ENCFF564UZL/@@download/ENCFF564UZL.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF378CIR bigBed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF187DLY 13048262 ENCODE Processing Pipeline d7743c3b6217a8a28608f94528d9d87f https://www.encodeproject.org/files/ENCFF378CIR/@@download/ENCFF378CIR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF129AND bigBed narrowPeak peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF680GWJ 12928591 ENCODE Processing Pipeline 0cda867cce40fe7e5cdd5d8095e9e75e https://www.encodeproject.org/files/ENCFF129AND/@@download/ENCFF129AND.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF909BJE bigBed narrowPeak optimal idr thresholded peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF317TMK 721990 ENCODE Processing Pipeline 08c75c9024e419254a849f5277f60c08 https://www.encodeproject.org/files/ENCFF909BJE/@@download/ENCFF909BJE.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF169QNM bed narrowPeak conservative idr thresholded peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF187DLY, ENCFF262AAT, ENCFF680GWJ 311882 ENCODE Processing Pipeline ceccd93c3bf55e14debf98fb2ce661d8 https://www.encodeproject.org/files/ENCFF169QNM/@@download/ENCFF169QNM.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF317TMK bed narrowPeak optimal idr thresholded peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF187DLY, ENCFF262AAT, ENCFF680GWJ 347367 ENCODE Processing Pipeline 024952fb5c33f399ff2230f2324b2c26 https://www.encodeproject.org/files/ENCFF317TMK/@@download/ENCFF317TMK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF883NXD bigBed narrowPeak conservative idr thresholded peaks ENCSR712FAM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZSCAN9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF169QNM 667817 ENCODE Processing Pipeline e23a7c20ced6506752355700525b45ab https://www.encodeproject.org/files/ENCFF883NXD/@@download/ENCFF883NXD.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF128NBF fastq reads ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1969636306 Richard Myers, HAIB 0517eced2fd200ec04d4114b52c76f32 SRA:SRR5339289 https://www.encodeproject.org/files/ENCFF128NBF/@@download/ENCFF128NBF.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF024PSP fastq reads ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2182881520 Richard Myers, HAIB 6eb6e857c817ebb016ad75bed071dcfa SRA:SRR5339288 https://www.encodeproject.org/files/ENCFF024PSP/@@download/ENCFF024PSP.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF364ULF bam unfiltered alignments ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF128NBF, ENCFF643CGH 2106305398 ENCODE Processing Pipeline 69913adbf9474326cafbfe6f14481655 https://www.encodeproject.org/files/ENCFF364ULF/@@download/ENCFF364ULF.bam GRCh38 released antibody characterized with exemption ENCFF856URQ bam unfiltered alignments ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF128NBF, ENCFF807MUK 2101978499 ENCODE Processing Pipeline 67c4d86c687f6ad78c77b53e738bcbf8 https://www.encodeproject.org/files/ENCFF856URQ/@@download/ENCFF856URQ.bam hg19 released antibody characterized with exemption ENCFF596FMG bam unfiltered alignments ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF024PSP, ENCFF807MUK 2394871886 ENCODE Processing Pipeline 605365a83e535c288cbcb013037f4095 https://www.encodeproject.org/files/ENCFF596FMG/@@download/ENCFF596FMG.bam hg19 released antibody characterized with exemption ENCFF043WWC bam unfiltered alignments ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF024PSP, ENCFF643CGH 2399087984 ENCODE Processing Pipeline 8675b215f09493a212e661bd395bf2de https://www.encodeproject.org/files/ENCFF043WWC/@@download/ENCFF043WWC.bam GRCh38 released antibody characterized with exemption ENCFF094BOF bam alignments ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF128NBF, ENCFF643CGH 1664130757 ENCODE Processing Pipeline 96b9e216a34f1d18bbb4e94b22054212 https://www.encodeproject.org/files/ENCFF094BOF/@@download/ENCFF094BOF.bam GRCh38 released antibody characterized with exemption ENCFF287FTU bam alignments ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF024PSP, ENCFF807MUK 1705175450 ENCODE Processing Pipeline b9a0e5d9358d1144b81343a20f87f64c https://www.encodeproject.org/files/ENCFF287FTU/@@download/ENCFF287FTU.bam hg19 released antibody characterized with exemption ENCFF384GVG bam alignments ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF128NBF, ENCFF807MUK 1663206860 ENCODE Processing Pipeline 1867cb6f6c67e248b1c545562586795e https://www.encodeproject.org/files/ENCFF384GVG/@@download/ENCFF384GVG.bam hg19 released antibody characterized with exemption ENCFF158DOO bam alignments ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF024PSP, ENCFF643CGH 1705903223 ENCODE Processing Pipeline ec5c5a6d4c845cf34f55b816902cbae0 https://www.encodeproject.org/files/ENCFF158DOO/@@download/ENCFF158DOO.bam GRCh38 released antibody characterized with exemption ENCFF495HCC bigWig signal p-value ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF094BOF 635264425 ENCODE Processing Pipeline 431302fe56ab5a18f7de221aa16c15cc https://www.encodeproject.org/files/ENCFF495HCC/@@download/ENCFF495HCC.bigWig GRCh38 released antibody characterized with exemption ENCFF697PQI bigWig signal p-value ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF158DOO 629574623 ENCODE Processing Pipeline 54a18a44427bfcea14b7af29a094b927 https://www.encodeproject.org/files/ENCFF697PQI/@@download/ENCFF697PQI.bigWig GRCh38 released antibody characterized with exemption ENCFF370RRF bigWig signal p-value ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF094BOF, ENCFF158DOO 644268042 ENCODE Processing Pipeline e75a51d6ac7b518c135d1ec743d18654 https://www.encodeproject.org/files/ENCFF370RRF/@@download/ENCFF370RRF.bigWig GRCh38 released antibody characterized with exemption ENCFF355KCP bigWig fold change over control ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF158DOO 612343785 ENCODE Processing Pipeline 3b2afe378097b1057f52c3437766b17d https://www.encodeproject.org/files/ENCFF355KCP/@@download/ENCFF355KCP.bigWig GRCh38 released antibody characterized with exemption ENCFF803LLG bigWig fold change over control ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF094BOF 602858368 ENCODE Processing Pipeline 4e61b7e961bb5fdeafc07625a7ee67e2 https://www.encodeproject.org/files/ENCFF803LLG/@@download/ENCFF803LLG.bigWig GRCh38 released antibody characterized with exemption ENCFF277XHE bigWig fold change over control ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF094BOF, ENCFF158DOO 992647942 ENCODE Processing Pipeline e2fa4a58ed58e4a09c35bc6751f3f9d8 https://www.encodeproject.org/files/ENCFF277XHE/@@download/ENCFF277XHE.bigWig GRCh38 released antibody characterized with exemption ENCFF813GQJ bed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF094BOF 6162821 ENCODE Processing Pipeline 53f4d71f364d565def97aaebd4a2fddc https://www.encodeproject.org/files/ENCFF813GQJ/@@download/ENCFF813GQJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF927JCC bed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF158DOO 6393673 ENCODE Processing Pipeline 9496a9ae6e867b447ffe6dde867282a0 https://www.encodeproject.org/files/ENCFF927JCC/@@download/ENCFF927JCC.bed.gz GRCh38 released antibody characterized with exemption ENCFF883MSN bed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF094BOF, ENCFF158DOO 6842680 ENCODE Processing Pipeline 0000d2be00a2f6d3039310303833dbd8 https://www.encodeproject.org/files/ENCFF883MSN/@@download/ENCFF883MSN.bed.gz GRCh38 released antibody characterized with exemption ENCFF590YYG bigBed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF813GQJ 13138014 ENCODE Processing Pipeline b3a109bb844ae510e8ff9ef4023ee1b1 https://www.encodeproject.org/files/ENCFF590YYG/@@download/ENCFF590YYG.bigBed GRCh38 released antibody characterized with exemption ENCFF598JJN bigBed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF927JCC 13104564 ENCODE Processing Pipeline 449edff6fa7994bbf8d4227cf6e97ff6 https://www.encodeproject.org/files/ENCFF598JJN/@@download/ENCFF598JJN.bigBed GRCh38 released antibody characterized with exemption ENCFF348TLV bigBed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF883MSN 13049857 ENCODE Processing Pipeline dcfc72085b38134d12980bbc09bd7f82 https://www.encodeproject.org/files/ENCFF348TLV/@@download/ENCFF348TLV.bigBed GRCh38 released antibody characterized with exemption ENCFF751UFO bed narrowPeak conservative idr thresholded peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF813GQJ, ENCFF883MSN, ENCFF927JCC 425583 ENCODE Processing Pipeline f8f915a5c04c581d647fcceede670000 https://www.encodeproject.org/files/ENCFF751UFO/@@download/ENCFF751UFO.bed.gz GRCh38 released antibody characterized with exemption ENCFF052EOE bed narrowPeak optimal idr thresholded peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF813GQJ, ENCFF883MSN, ENCFF927JCC 456774 ENCODE Processing Pipeline 5da734b7a66d68f03cdb8d8821178d7b https://www.encodeproject.org/files/ENCFF052EOE/@@download/ENCFF052EOE.bed.gz GRCh38 released antibody characterized with exemption ENCFF911RJS bigBed narrowPeak conservative idr thresholded peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF751UFO 858785 ENCODE Processing Pipeline 6520c40714b029ae3f7d67429d003162 https://www.encodeproject.org/files/ENCFF911RJS/@@download/ENCFF911RJS.bigBed GRCh38 released antibody characterized with exemption ENCFF432VTY bigBed narrowPeak optimal idr thresholded peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF052EOE 905642 ENCODE Processing Pipeline 114dd98708078a764ca4d77dd55c0be4 https://www.encodeproject.org/files/ENCFF432VTY/@@download/ENCFF432VTY.bigBed GRCh38 released antibody characterized with exemption ENCFF754GGN bigWig signal p-value ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF384GVG 1211609075 ENCODE Processing Pipeline 2c22810eadc32b08fdd7a866dd73dcab https://www.encodeproject.org/files/ENCFF754GGN/@@download/ENCFF754GGN.bigWig hg19 released antibody characterized with exemption ENCFF711MHT bigWig signal p-value ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF287FTU 1307501088 ENCODE Processing Pipeline 2bc176288b70914b7671c4f3301fe482 https://www.encodeproject.org/files/ENCFF711MHT/@@download/ENCFF711MHT.bigWig hg19 released antibody characterized with exemption ENCFF335LIX bigWig signal p-value ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF287FTU, ENCFF384GVG 1787454877 ENCODE Processing Pipeline 8a8873e881755ed6008b508f4bc16a20 https://www.encodeproject.org/files/ENCFF335LIX/@@download/ENCFF335LIX.bigWig hg19 released antibody characterized with exemption ENCFF183CSU bigWig fold change over control ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF384GVG 1070206900 ENCODE Processing Pipeline 76c316861bea809d23f46a8bd56cabd5 https://www.encodeproject.org/files/ENCFF183CSU/@@download/ENCFF183CSU.bigWig hg19 released antibody characterized with exemption ENCFF185AMK bigWig fold change over control ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF287FTU 1143577638 ENCODE Processing Pipeline e5fb79f811968f5be919b995de40a34c https://www.encodeproject.org/files/ENCFF185AMK/@@download/ENCFF185AMK.bigWig hg19 released antibody characterized with exemption ENCFF026EFC bigWig fold change over control ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF287FTU, ENCFF384GVG 1641183040 ENCODE Processing Pipeline 13f1247e7fb602714ae3458ef7842d35 https://www.encodeproject.org/files/ENCFF026EFC/@@download/ENCFF026EFC.bigWig hg19 released antibody characterized with exemption ENCFF684QNN bed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF287FTU 6790311 ENCODE Processing Pipeline ca9f88b167eafe7d477d98130f917a68 https://www.encodeproject.org/files/ENCFF684QNN/@@download/ENCFF684QNN.bed.gz hg19 released antibody characterized with exemption ENCFF967KQK bed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF384GVG 6740546 ENCODE Processing Pipeline d6a36188d902c401e9801ce8bcd19d9f https://www.encodeproject.org/files/ENCFF967KQK/@@download/ENCFF967KQK.bed.gz hg19 released antibody characterized with exemption ENCFF507QHH bed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF287FTU, ENCFF384GVG 7072373 ENCODE Processing Pipeline 1cdecb6a3e016523a96fdf6627dfb301 https://www.encodeproject.org/files/ENCFF507QHH/@@download/ENCFF507QHH.bed.gz hg19 released antibody characterized with exemption ENCFF047RUG bigBed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF967KQK 13151864 ENCODE Processing Pipeline 811d358fc514c7b960677792694239f9 https://www.encodeproject.org/files/ENCFF047RUG/@@download/ENCFF047RUG.bigBed hg19 released antibody characterized with exemption ENCFF634CZL bigBed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF684QNN 13090992 ENCODE Processing Pipeline ace362aba5c1a8246519794997047202 https://www.encodeproject.org/files/ENCFF634CZL/@@download/ENCFF634CZL.bigBed hg19 released antibody characterized with exemption ENCFF993EVG bigBed narrowPeak peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF507QHH 13022379 ENCODE Processing Pipeline 53063e7c4fb0ce03026c3232fff3bca7 https://www.encodeproject.org/files/ENCFF993EVG/@@download/ENCFF993EVG.bigBed hg19 released antibody characterized with exemption ENCFF741SPC bed narrowPeak conservative idr thresholded peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF507QHH, ENCFF684QNN, ENCFF967KQK 415299 ENCODE Processing Pipeline 2a9d8e0fd7f957408a70be6da0a0adfd https://www.encodeproject.org/files/ENCFF741SPC/@@download/ENCFF741SPC.bed.gz hg19 released antibody characterized with exemption ENCFF964WLP bigBed narrowPeak optimal idr thresholded peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF602SZJ 892290 ENCODE Processing Pipeline a0c9a80f6451d28a050649ecc24ecb09 https://www.encodeproject.org/files/ENCFF964WLP/@@download/ENCFF964WLP.bigBed hg19 released antibody characterized with exemption ENCFF763OXX bigBed narrowPeak conservative idr thresholded peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF741SPC 878652 ENCODE Processing Pipeline 4781be2015cfd9bd07fae86a61a366f7 https://www.encodeproject.org/files/ENCFF763OXX/@@download/ENCFF763OXX.bigBed hg19 released antibody characterized with exemption ENCFF602SZJ bed narrowPeak optimal idr thresholded peaks ENCSR765MKZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DRAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF507QHH, ENCFF684QNN, ENCFF967KQK 424464 ENCODE Processing Pipeline 9d7ed0d84a7c2b1c06dbe54bfa83d64b https://www.encodeproject.org/files/ENCFF602SZJ/@@download/ENCFF602SZJ.bed.gz hg19 released antibody characterized with exemption ENCFF795MVM fastq reads ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1375457120 Richard Myers, HAIB b8a018d14995ed23e5e1d00843c85383 SRA:SRR5339609 https://www.encodeproject.org/files/ENCFF795MVM/@@download/ENCFF795MVM.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF351KCG fastq reads ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1592082329 Richard Myers, HAIB a091215b39d79cb4c90d67f4a6c29cee SRA:SRR5339608 https://www.encodeproject.org/files/ENCFF351KCG/@@download/ENCFF351KCG.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF642CVG bam unfiltered alignments ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF795MVM, ENCFF807MUK 1491084289 ENCODE Processing Pipeline bc356143423f8837a2115845a953b1ab https://www.encodeproject.org/files/ENCFF642CVG/@@download/ENCFF642CVG.bam hg19 released antibody characterized with exemption ENCFF276KJX bam unfiltered alignments ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF351KCG, ENCFF807MUK 1717496595 ENCODE Processing Pipeline 0934670c25c9e6d667cc89b52a706ce9 https://www.encodeproject.org/files/ENCFF276KJX/@@download/ENCFF276KJX.bam hg19 released antibody characterized with exemption ENCFF688VTW bam unfiltered alignments ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF351KCG, ENCFF643CGH 1721207742 ENCODE Processing Pipeline a98389669bcd169395fff618edd084e9 https://www.encodeproject.org/files/ENCFF688VTW/@@download/ENCFF688VTW.bam GRCh38 released antibody characterized with exemption ENCFF875XUT bam unfiltered alignments ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF795MVM 1494479008 ENCODE Processing Pipeline 854faa98828e45eeb17064d95535f61b https://www.encodeproject.org/files/ENCFF875XUT/@@download/ENCFF875XUT.bam GRCh38 released antibody characterized with exemption ENCFF795LWN bam alignments ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF795MVM, ENCFF807MUK 1152927843 ENCODE Processing Pipeline b1545d224aca23487d890bce3b771c57 https://www.encodeproject.org/files/ENCFF795LWN/@@download/ENCFF795LWN.bam hg19 released antibody characterized with exemption ENCFF028QZW bam alignments ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF795MVM 1153609262 ENCODE Processing Pipeline 42e7648e0d942386f6444a3ed8cae064 https://www.encodeproject.org/files/ENCFF028QZW/@@download/ENCFF028QZW.bam GRCh38 released antibody characterized with exemption ENCFF507NBQ bam alignments ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF351KCG, ENCFF643CGH 1339177226 ENCODE Processing Pipeline 202f917c79bf46c2dccd66c9437f3319 https://www.encodeproject.org/files/ENCFF507NBQ/@@download/ENCFF507NBQ.bam GRCh38 released antibody characterized with exemption ENCFF737RIN bam alignments ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF351KCG, ENCFF807MUK 1338497346 ENCODE Processing Pipeline f17f6d20abe2ea2d431e965b9bc3fc8c https://www.encodeproject.org/files/ENCFF737RIN/@@download/ENCFF737RIN.bam hg19 released antibody characterized with exemption ENCFF935WLX bigWig signal p-value ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF507NBQ 521347138 ENCODE Processing Pipeline a539df498cf1eab8645b11519749eb6e https://www.encodeproject.org/files/ENCFF935WLX/@@download/ENCFF935WLX.bigWig GRCh38 released antibody characterized with exemption ENCFF941KJJ bigWig signal p-value ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF028QZW, ENCFF507NBQ 669895515 ENCODE Processing Pipeline cd90824316e4a7569d28ee2565557d51 https://www.encodeproject.org/files/ENCFF941KJJ/@@download/ENCFF941KJJ.bigWig GRCh38 released antibody characterized with exemption ENCFF936MWL bigWig fold change over control ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF028QZW 430910643 ENCODE Processing Pipeline f9acefefab270e66ea0fbff60c1b5c0f https://www.encodeproject.org/files/ENCFF936MWL/@@download/ENCFF936MWL.bigWig GRCh38 released antibody characterized with exemption ENCFF873BAZ bigWig signal p-value ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF028QZW 511922446 ENCODE Processing Pipeline 391d108087e92f282ac2495b50693648 https://www.encodeproject.org/files/ENCFF873BAZ/@@download/ENCFF873BAZ.bigWig GRCh38 released antibody characterized with exemption ENCFF764MUZ bigWig fold change over control ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF507NBQ 472497338 ENCODE Processing Pipeline 381e45522c3ab5993c74ac8446b26d1f https://www.encodeproject.org/files/ENCFF764MUZ/@@download/ENCFF764MUZ.bigWig GRCh38 released antibody characterized with exemption ENCFF165CAC bigWig fold change over control ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF028QZW, ENCFF507NBQ 766305075 ENCODE Processing Pipeline 01f0547fb424c0f4348f2f90c85ae260 https://www.encodeproject.org/files/ENCFF165CAC/@@download/ENCFF165CAC.bigWig GRCh38 released antibody characterized with exemption ENCFF724SWR bed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF507NBQ 6030899 ENCODE Processing Pipeline 02f045fd25aece033c1f0ce97cba74af https://www.encodeproject.org/files/ENCFF724SWR/@@download/ENCFF724SWR.bed.gz GRCh38 released antibody characterized with exemption ENCFF847KKE bed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF028QZW 5545315 ENCODE Processing Pipeline 7c20936a3f7a6de78f9dcb1577d1fb5d https://www.encodeproject.org/files/ENCFF847KKE/@@download/ENCFF847KKE.bed.gz GRCh38 released antibody characterized with exemption ENCFF417YFV bed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF028QZW, ENCFF507NBQ 6598060 ENCODE Processing Pipeline e7ac69a10120f3372d5fff51aab81695 https://www.encodeproject.org/files/ENCFF417YFV/@@download/ENCFF417YFV.bed.gz GRCh38 released antibody characterized with exemption ENCFF286FHO bigBed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF724SWR 13159094 ENCODE Processing Pipeline 2220b8bb3c4cb8083aa9eae90d7e8c3d https://www.encodeproject.org/files/ENCFF286FHO/@@download/ENCFF286FHO.bigBed GRCh38 released antibody characterized with exemption ENCFF701INU bigBed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF417YFV 13155536 ENCODE Processing Pipeline 68083f62a1216f869ed662f5fe4bb1a5 https://www.encodeproject.org/files/ENCFF701INU/@@download/ENCFF701INU.bigBed GRCh38 released antibody characterized with exemption ENCFF337GPX bigBed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF847KKE 13176399 ENCODE Processing Pipeline 3b396fd9d9242e9430613926e4188e91 https://www.encodeproject.org/files/ENCFF337GPX/@@download/ENCFF337GPX.bigBed GRCh38 released antibody characterized with exemption ENCFF413WVP bed narrowPeak conservative idr thresholded peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF417YFV, ENCFF419RSJ, ENCFF724SWR, ENCFF847KKE 153133 ENCODE Processing Pipeline 05f6b6ee66d7e636e2c53a9b458f4554 https://www.encodeproject.org/files/ENCFF413WVP/@@download/ENCFF413WVP.bed.gz GRCh38 released antibody characterized with exemption ENCFF590EST bigBed narrowPeak optimal idr thresholded peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF529UJY 371418 ENCODE Processing Pipeline 4eec15abbf346ae0f8d76c680bbfff1a https://www.encodeproject.org/files/ENCFF590EST/@@download/ENCFF590EST.bigBed GRCh38 released antibody characterized with exemption ENCFF529UJY bed narrowPeak optimal idr thresholded peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF417YFV, ENCFF419RSJ, ENCFF724SWR, ENCFF847KKE 155399 ENCODE Processing Pipeline 2e23639f78aa7ffc989b2a61497a369b https://www.encodeproject.org/files/ENCFF529UJY/@@download/ENCFF529UJY.bed.gz GRCh38 released antibody characterized with exemption ENCFF739SPU bigBed narrowPeak conservative idr thresholded peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF413WVP 366676 ENCODE Processing Pipeline d66635878603e3b64871efa4fb356138 https://www.encodeproject.org/files/ENCFF739SPU/@@download/ENCFF739SPU.bigBed GRCh38 released antibody characterized with exemption ENCFF329LXS bigWig signal p-value ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF737RIN 1215071824 ENCODE Processing Pipeline 4e0ee55539df2c20e51e660fa41689a7 https://www.encodeproject.org/files/ENCFF329LXS/@@download/ENCFF329LXS.bigWig hg19 released antibody characterized with exemption ENCFF093YTV bigWig signal p-value ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF795LWN 1170574886 ENCODE Processing Pipeline e6576e921794a69c5979d09545d0a4e7 https://www.encodeproject.org/files/ENCFF093YTV/@@download/ENCFF093YTV.bigWig hg19 released antibody characterized with exemption ENCFF326WAL bigWig signal p-value ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF737RIN, ENCFF795LWN 1358839541 ENCODE Processing Pipeline 632f90e972f924c2dea153b4bf645e17 https://www.encodeproject.org/files/ENCFF326WAL/@@download/ENCFF326WAL.bigWig hg19 released antibody characterized with exemption ENCFF629IQG bigWig fold change over control ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF737RIN 879904123 ENCODE Processing Pipeline e5eba9a43b1880a0ec5d1e43cc3f9382 https://www.encodeproject.org/files/ENCFF629IQG/@@download/ENCFF629IQG.bigWig hg19 released antibody characterized with exemption ENCFF903SRX bigWig fold change over control ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF795LWN 885861127 ENCODE Processing Pipeline 33aaa5a58d981e4a6028b0521094ed3b https://www.encodeproject.org/files/ENCFF903SRX/@@download/ENCFF903SRX.bigWig hg19 released antibody characterized with exemption ENCFF401LXI bigWig fold change over control ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF737RIN, ENCFF795LWN 1309637904 ENCODE Processing Pipeline 5046cc9e655a290c38b6dc6067f6838f https://www.encodeproject.org/files/ENCFF401LXI/@@download/ENCFF401LXI.bigWig hg19 released antibody characterized with exemption ENCFF003YYP bed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF737RIN 6726326 ENCODE Processing Pipeline 73c92a832e55bd708ccb72e4f5557b4e https://www.encodeproject.org/files/ENCFF003YYP/@@download/ENCFF003YYP.bed.gz hg19 released antibody characterized with exemption ENCFF405GYP bed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF795LWN 6532978 ENCODE Processing Pipeline 7dd538179411c1feafb5683291773164 https://www.encodeproject.org/files/ENCFF405GYP/@@download/ENCFF405GYP.bed.gz hg19 released antibody characterized with exemption ENCFF695EWL bed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF737RIN, ENCFF795LWN 7092621 ENCODE Processing Pipeline e5f8bb238a0adacfaaf9369566d18257 https://www.encodeproject.org/files/ENCFF695EWL/@@download/ENCFF695EWL.bed.gz hg19 released antibody characterized with exemption ENCFF919JOI bigBed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF405GYP 13280794 ENCODE Processing Pipeline d68a1a8a2a47e4546b4110fe37a82d47 https://www.encodeproject.org/files/ENCFF919JOI/@@download/ENCFF919JOI.bigBed hg19 released antibody characterized with exemption ENCFF935CQL bigBed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF003YYP 13146104 ENCODE Processing Pipeline 10f64556d8ead4351285324dd2b04780 https://www.encodeproject.org/files/ENCFF935CQL/@@download/ENCFF935CQL.bigBed hg19 released antibody characterized with exemption ENCFF705KOR bigBed narrowPeak peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF695EWL 13092668 ENCODE Processing Pipeline bbbbfc7cf9075fe91bcb18eba2295f63 https://www.encodeproject.org/files/ENCFF705KOR/@@download/ENCFF705KOR.bigBed hg19 released antibody characterized with exemption ENCFF183GLW bigBed narrowPeak conservative idr thresholded peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF045ADH 271812 ENCODE Processing Pipeline 61a220965c189b76b74cef7488fac4ba https://www.encodeproject.org/files/ENCFF183GLW/@@download/ENCFF183GLW.bigBed hg19 released antibody characterized with exemption ENCFF935DRA bed narrowPeak optimal idr thresholded peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF003YYP, ENCFF405GYP, ENCFF695EWL 138170 ENCODE Processing Pipeline 940531fe2dfac10cf8a454410b585cc2 https://www.encodeproject.org/files/ENCFF935DRA/@@download/ENCFF935DRA.bed.gz hg19 released antibody characterized with exemption ENCFF045ADH bed narrowPeak conservative idr thresholded peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF003YYP, ENCFF405GYP, ENCFF695EWL 126799 ENCODE Processing Pipeline 45138303073d842143634be12c724cae https://www.encodeproject.org/files/ENCFF045ADH/@@download/ENCFF045ADH.bed.gz hg19 released antibody characterized with exemption ENCFF870YUG bigBed narrowPeak optimal idr thresholded peaks ENCSR938ETG ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF9-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF935DRA 288057 ENCODE Processing Pipeline 9ba89e685284d01b95fbb5079d51018b https://www.encodeproject.org/files/ENCFF870YUG/@@download/ENCFF870YUG.bigBed hg19 released antibody characterized with exemption ENCFF763NHP fastq reads ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1309429698 Richard Myers, HAIB 72f29b8a93451a717e22673182d47201 SRA:SRR5338784 https://www.encodeproject.org/files/ENCFF763NHP/@@download/ENCFF763NHP.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF040QAY fastq reads ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1413295997 Richard Myers, HAIB 23f21dbb0d05e2c8eef27c5bff916a1d SRA:SRR5338785 https://www.encodeproject.org/files/ENCFF040QAY/@@download/ENCFF040QAY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF799EAP bam unfiltered alignments ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF040QAY, ENCFF807MUK 1679002569 ENCODE Processing Pipeline a0f8d6c5b944130606cb8e218c02e196 https://www.encodeproject.org/files/ENCFF799EAP/@@download/ENCFF799EAP.bam hg19 released antibody characterized with exemption ENCFF148ZQD bam unfiltered alignments ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF763NHP 1551983097 ENCODE Processing Pipeline 1a7251d69187b21ae9b9701c3751633e https://www.encodeproject.org/files/ENCFF148ZQD/@@download/ENCFF148ZQD.bam GRCh38 released antibody characterized with exemption ENCFF665GTT bam unfiltered alignments ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF040QAY, ENCFF643CGH 1682616625 ENCODE Processing Pipeline 22c2fb293f0cee53ee73d6f67b613086 https://www.encodeproject.org/files/ENCFF665GTT/@@download/ENCFF665GTT.bam GRCh38 released antibody characterized with exemption ENCFF598NNI bam unfiltered alignments ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF763NHP, ENCFF807MUK 1548337155 ENCODE Processing Pipeline 576534bfba51a0dc734e3644722126fc https://www.encodeproject.org/files/ENCFF598NNI/@@download/ENCFF598NNI.bam hg19 released antibody characterized with exemption ENCFF330XIE bam alignments ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF763NHP 1206532281 ENCODE Processing Pipeline a6201959cbf9d7974aeeeb0ce034b1de https://www.encodeproject.org/files/ENCFF330XIE/@@download/ENCFF330XIE.bam GRCh38 released antibody characterized with exemption ENCFF133REZ bam alignments ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF763NHP, ENCFF807MUK 1205950595 ENCODE Processing Pipeline c96e4bc3b97202dac1000b5e7b049ec3 https://www.encodeproject.org/files/ENCFF133REZ/@@download/ENCFF133REZ.bam hg19 released antibody characterized with exemption ENCFF166DDT bam alignments ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF040QAY, ENCFF807MUK 1321791220 ENCODE Processing Pipeline f80321d7dc7792df64a3d08db054d6d7 https://www.encodeproject.org/files/ENCFF166DDT/@@download/ENCFF166DDT.bam hg19 released antibody characterized with exemption ENCFF191DNO bam alignments ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF040QAY, ENCFF643CGH 1322490442 ENCODE Processing Pipeline cbba37a68dc5680fbe950afa3d4a4518 https://www.encodeproject.org/files/ENCFF191DNO/@@download/ENCFF191DNO.bam GRCh38 released antibody characterized with exemption ENCFF268ZIP bigWig signal p-value ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF330XIE 507195086 ENCODE Processing Pipeline e811d1b57cbd9681b3c36dfafc376f02 https://www.encodeproject.org/files/ENCFF268ZIP/@@download/ENCFF268ZIP.bigWig GRCh38 released antibody characterized with exemption ENCFF594FSH bigWig signal p-value ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF191DNO 529558159 ENCODE Processing Pipeline d9b819188fc0c669da75ded9aa223f5c https://www.encodeproject.org/files/ENCFF594FSH/@@download/ENCFF594FSH.bigWig GRCh38 released antibody characterized with exemption ENCFF751KMZ bigWig fold change over control ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF191DNO 500512614 ENCODE Processing Pipeline 66e4dcb6bc72497f90398cb6b57108f0 https://www.encodeproject.org/files/ENCFF751KMZ/@@download/ENCFF751KMZ.bigWig GRCh38 released antibody characterized with exemption ENCFF259WJH bigWig signal p-value ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF191DNO, ENCFF330XIE 642258526 ENCODE Processing Pipeline 667075f3cf432ed71a3e1496986f8b55 https://www.encodeproject.org/files/ENCFF259WJH/@@download/ENCFF259WJH.bigWig GRCh38 released antibody characterized with exemption ENCFF179FEJ bigWig fold change over control ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF330XIE 480192946 ENCODE Processing Pipeline 50a211664cf3ade70eca72c16787fa32 https://www.encodeproject.org/files/ENCFF179FEJ/@@download/ENCFF179FEJ.bigWig GRCh38 released antibody characterized with exemption ENCFF922ZYU bigWig fold change over control ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF191DNO, ENCFF330XIE 790559841 ENCODE Processing Pipeline d4cd23694aa473e308083f5850ba6916 https://www.encodeproject.org/files/ENCFF922ZYU/@@download/ENCFF922ZYU.bigWig GRCh38 released antibody characterized with exemption ENCFF437XJD bed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF191DNO 6244349 ENCODE Processing Pipeline 11f4ff216a55b59a9008b3a70704607d https://www.encodeproject.org/files/ENCFF437XJD/@@download/ENCFF437XJD.bed.gz GRCh38 released antibody characterized with exemption ENCFF442QZP bed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF330XIE 6434278 ENCODE Processing Pipeline 9a372b60604b2f48ce8fc2fddd6cec98 https://www.encodeproject.org/files/ENCFF442QZP/@@download/ENCFF442QZP.bed.gz GRCh38 released antibody characterized with exemption ENCFF952OXH bed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF191DNO, ENCFF330XIE 6854288 ENCODE Processing Pipeline e3cc1875e235d0804be9e0a47cdceac3 https://www.encodeproject.org/files/ENCFF952OXH/@@download/ENCFF952OXH.bed.gz GRCh38 released antibody characterized with exemption ENCFF274JRK bigBed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF437XJD 12867292 ENCODE Processing Pipeline bc5c7a1370c885c2ed0b2e458e808d1e https://www.encodeproject.org/files/ENCFF274JRK/@@download/ENCFF274JRK.bigBed GRCh38 released antibody characterized with exemption ENCFF423NNZ bigBed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF442QZP 12871348 ENCODE Processing Pipeline 77e7a04a54870aae354c136d257e1d66 https://www.encodeproject.org/files/ENCFF423NNZ/@@download/ENCFF423NNZ.bigBed GRCh38 released antibody characterized with exemption ENCFF297COS bigBed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF952OXH 12755182 ENCODE Processing Pipeline fc4526b864253b8b549f24b38be0c889 https://www.encodeproject.org/files/ENCFF297COS/@@download/ENCFF297COS.bigBed GRCh38 released antibody characterized with exemption ENCFF581CQM bed narrowPeak conservative idr thresholded peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF437XJD, ENCFF442QZP, ENCFF952OXH 352154 ENCODE Processing Pipeline 1f78e0510710364d61e0235d6e8970e5 https://www.encodeproject.org/files/ENCFF581CQM/@@download/ENCFF581CQM.bed.gz GRCh38 released antibody characterized with exemption ENCFF746VYH bigBed narrowPeak conservative idr thresholded peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF581CQM 690636 ENCODE Processing Pipeline b5742d8bd6071de70fd98191fd95af3e https://www.encodeproject.org/files/ENCFF746VYH/@@download/ENCFF746VYH.bigBed GRCh38 released antibody characterized with exemption ENCFF523CUM bed narrowPeak optimal idr thresholded peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF437XJD, ENCFF442QZP, ENCFF952OXH 381389 ENCODE Processing Pipeline 44061eab9876767c717614b09b1f1afe https://www.encodeproject.org/files/ENCFF523CUM/@@download/ENCFF523CUM.bed.gz GRCh38 released antibody characterized with exemption ENCFF448IHK bigBed narrowPeak optimal idr thresholded peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF523CUM 735165 ENCODE Processing Pipeline a87c87b00207efe0b374a1ee0ed4c9c1 https://www.encodeproject.org/files/ENCFF448IHK/@@download/ENCFF448IHK.bigBed GRCh38 released antibody characterized with exemption ENCFF982PUO bigWig signal p-value ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF166DDT, ENCFF203ABR 1212196126 ENCODE Processing Pipeline d4e8c5c301c553a030e2fd12ab961bf2 https://www.encodeproject.org/files/ENCFF982PUO/@@download/ENCFF982PUO.bigWig hg19 released antibody characterized with exemption ENCFF681EGM bigWig signal p-value ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF133REZ, ENCFF203ABR 1181328592 ENCODE Processing Pipeline b6eee0c7053813c662e880107a675e91 https://www.encodeproject.org/files/ENCFF681EGM/@@download/ENCFF681EGM.bigWig hg19 released antibody characterized with exemption ENCFF498UPT bigWig signal p-value ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF133REZ, ENCFF166DDT, ENCFF203ABR 1308635312 ENCODE Processing Pipeline 6c4d4ef2e4a55fb414653cee263cd99a https://www.encodeproject.org/files/ENCFF498UPT/@@download/ENCFF498UPT.bigWig hg19 released antibody characterized with exemption ENCFF490ZGO bigWig fold change over control ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF166DDT, ENCFF203ABR 947776197 ENCODE Processing Pipeline dd105dc844f7e39b24c9060a48cee192 https://www.encodeproject.org/files/ENCFF490ZGO/@@download/ENCFF490ZGO.bigWig hg19 released antibody characterized with exemption ENCFF451DFC bigWig fold change over control ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF133REZ, ENCFF203ABR 851473282 ENCODE Processing Pipeline 55510deb5e2f49be0fffec39036fc47d https://www.encodeproject.org/files/ENCFF451DFC/@@download/ENCFF451DFC.bigWig hg19 released antibody characterized with exemption ENCFF952ZYO bigWig fold change over control ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF133REZ, ENCFF166DDT, ENCFF203ABR 1409406034 ENCODE Processing Pipeline 40971a5f536096763c2d45ea675d861e https://www.encodeproject.org/files/ENCFF952ZYO/@@download/ENCFF952ZYO.bigWig hg19 released antibody characterized with exemption ENCFF331PEV bed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF166DDT, ENCFF203ABR 6774249 ENCODE Processing Pipeline 46a1a129b257b17f3e613d71becc23d4 https://www.encodeproject.org/files/ENCFF331PEV/@@download/ENCFF331PEV.bed.gz hg19 released antibody characterized with exemption ENCFF659PMQ bed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF133REZ, ENCFF203ABR 6845292 ENCODE Processing Pipeline 09972bea82549ed9d4c64068f54edcd4 https://www.encodeproject.org/files/ENCFF659PMQ/@@download/ENCFF659PMQ.bed.gz hg19 released antibody characterized with exemption ENCFF114REO bed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF133REZ, ENCFF166DDT, ENCFF203ABR 7127179 ENCODE Processing Pipeline 958ab5c0c30599d3f564a66e25b8a2e7 https://www.encodeproject.org/files/ENCFF114REO/@@download/ENCFF114REO.bed.gz hg19 released antibody characterized with exemption ENCFF994ZQN bigBed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF331PEV 12787995 ENCODE Processing Pipeline 22d3e226f5ef24b2cce575d2166bfa81 https://www.encodeproject.org/files/ENCFF994ZQN/@@download/ENCFF994ZQN.bigBed hg19 released antibody characterized with exemption ENCFF975QMD bigBed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF659PMQ 12725500 ENCODE Processing Pipeline 1e7f66ae7f551fc4026d5466731a776a https://www.encodeproject.org/files/ENCFF975QMD/@@download/ENCFF975QMD.bigBed hg19 released antibody characterized with exemption ENCFF345CNY bed narrowPeak conservative idr thresholded peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF114REO, ENCFF331PEV, ENCFF659PMQ 362852 ENCODE Processing Pipeline 2a0d370d00e48d7c4345dfa39a4c5fb8 https://www.encodeproject.org/files/ENCFF345CNY/@@download/ENCFF345CNY.bed.gz hg19 released antibody characterized with exemption ENCFF525JFC bigBed narrowPeak peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF114REO 12740959 ENCODE Processing Pipeline ca1a12d1f9972e36a043d1058af02261 https://www.encodeproject.org/files/ENCFF525JFC/@@download/ENCFF525JFC.bigBed hg19 released antibody characterized with exemption ENCFF788BBU bigBed narrowPeak conservative idr thresholded peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF345CNY 737985 ENCODE Processing Pipeline 1f080632a870afc0d6114d9842b621e0 https://www.encodeproject.org/files/ENCFF788BBU/@@download/ENCFF788BBU.bigBed hg19 released antibody characterized with exemption ENCFF529VDF bed narrowPeak optimal idr thresholded peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF114REO, ENCFF331PEV, ENCFF659PMQ 375868 ENCODE Processing Pipeline 57a502e8f6aa3e33867111cec967ebdf https://www.encodeproject.org/files/ENCFF529VDF/@@download/ENCFF529VDF.bed.gz hg19 released antibody characterized with exemption ENCFF685LGU bigBed narrowPeak optimal idr thresholded peaks ENCSR455DOO ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RCOR2-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF529VDF 757768 ENCODE Processing Pipeline 9855dec0787ffea4239ba70f38918ddf https://www.encodeproject.org/files/ENCFF685LGU/@@download/ENCFF685LGU.bigBed hg19 released antibody characterized with exemption ENCFF266MCK fastq reads ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1269610730 Richard Myers, HAIB d390b503ffe096a3f7c53e1aad03ef1f SRA:SRR5339678 https://www.encodeproject.org/files/ENCFF266MCK/@@download/ENCFF266MCK.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF811ZQF fastq reads ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1309310657 Richard Myers, HAIB 8c924f30acbf701260756a5c03c574aa SRA:SRR5339677 https://www.encodeproject.org/files/ENCFF811ZQF/@@download/ENCFF811ZQF.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF045AUV bam unfiltered alignments ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF811ZQF 1425888391 ENCODE Processing Pipeline bfd01397e685637c322482a46400c641 https://www.encodeproject.org/files/ENCFF045AUV/@@download/ENCFF045AUV.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF971RLJ bam unfiltered alignments ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF266MCK, ENCFF643CGH 1389961231 ENCODE Processing Pipeline 3beb04a148e4fe4ae39c5ea7967d23f4 https://www.encodeproject.org/files/ENCFF971RLJ/@@download/ENCFF971RLJ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF681PFC bam unfiltered alignments ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF266MCK, ENCFF807MUK 1385884524 ENCODE Processing Pipeline eaa1d15e200cecd4bdb68cc1cd712014 https://www.encodeproject.org/files/ENCFF681PFC/@@download/ENCFF681PFC.bam hg19 released antibody characterized with exemption, low read depth ENCFF803STI bam unfiltered alignments ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF811ZQF 1422981192 ENCODE Processing Pipeline 7eabca6a275a2b8f9b0c17ee79e137c0 https://www.encodeproject.org/files/ENCFF803STI/@@download/ENCFF803STI.bam hg19 released antibody characterized with exemption, low read depth ENCFF033VMH bam alignments ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF811ZQF 1116396701 ENCODE Processing Pipeline f07ee86baf52de04248a6438d119b7fb https://www.encodeproject.org/files/ENCFF033VMH/@@download/ENCFF033VMH.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF532ZHO bam alignments ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF807MUK, ENCFF811ZQF 1115728667 ENCODE Processing Pipeline dcebf1ac15da8b771ffe26d199938582 https://www.encodeproject.org/files/ENCFF532ZHO/@@download/ENCFF532ZHO.bam hg19 released antibody characterized with exemption, low read depth ENCFF806KRN bam alignments ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF266MCK, ENCFF807MUK 1044890524 ENCODE Processing Pipeline d839257ba9ccccdc4c58dd13e745daad https://www.encodeproject.org/files/ENCFF806KRN/@@download/ENCFF806KRN.bam hg19 released antibody characterized with exemption, low read depth ENCFF328AHJ bam alignments ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF266MCK, ENCFF643CGH 1045683657 ENCODE Processing Pipeline 8844b1d4e3ff63672f7b4a20c762c14f https://www.encodeproject.org/files/ENCFF328AHJ/@@download/ENCFF328AHJ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF282JCA bigWig signal p-value ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF033VMH 525385769 ENCODE Processing Pipeline f016b8c89038e99ddd5f79fcbe0c1478 https://www.encodeproject.org/files/ENCFF282JCA/@@download/ENCFF282JCA.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF760XUN bigWig fold change over control ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF328AHJ 414201581 ENCODE Processing Pipeline 70e2b388052a40261857795ba03c0e84 https://www.encodeproject.org/files/ENCFF760XUN/@@download/ENCFF760XUN.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF178NGR bigWig signal p-value ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF328AHJ 439749089 ENCODE Processing Pipeline 78c7ea47ca0c495e96b674dad017cd51 https://www.encodeproject.org/files/ENCFF178NGR/@@download/ENCFF178NGR.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF998IXB bigWig signal p-value ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF033VMH, ENCFF328AHJ 655434242 ENCODE Processing Pipeline 0aa59cb0268260c8257f07c45d4e7584 https://www.encodeproject.org/files/ENCFF998IXB/@@download/ENCFF998IXB.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF336ESH bigWig fold change over control ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF033VMH 463459598 ENCODE Processing Pipeline 76f07800a287971ccf45f98d0456c2c0 https://www.encodeproject.org/files/ENCFF336ESH/@@download/ENCFF336ESH.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF424PYM bed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF033VMH 5598038 ENCODE Processing Pipeline 6a038a61c5cf14ad48cc3e88d8ee65d0 https://www.encodeproject.org/files/ENCFF424PYM/@@download/ENCFF424PYM.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF551KYF bigBed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF424PYM 13151380 ENCODE Processing Pipeline 6d8fff7697cf0e061768e65d54dca306 https://www.encodeproject.org/files/ENCFF551KYF/@@download/ENCFF551KYF.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF597CWQ bigWig fold change over control ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF033VMH, ENCFF328AHJ 727354937 ENCODE Processing Pipeline 72b8e1c6a4e5a649560c1a4f03b4f8d4 https://www.encodeproject.org/files/ENCFF597CWQ/@@download/ENCFF597CWQ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF434RLK bed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF033VMH, ENCFF328AHJ 5525664 ENCODE Processing Pipeline 49237669cb92f4d7a727825ac30ba912 https://www.encodeproject.org/files/ENCFF434RLK/@@download/ENCFF434RLK.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF418QKJ bigBed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF869GAY 11007912 ENCODE Processing Pipeline fb425c77c1ec43e73d977e8b1eb1f1b4 https://www.encodeproject.org/files/ENCFF418QKJ/@@download/ENCFF418QKJ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF869GAY bed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF328AHJ 4933834 ENCODE Processing Pipeline 7101a27574cf8dd2598dbdb26e8f9d94 https://www.encodeproject.org/files/ENCFF869GAY/@@download/ENCFF869GAY.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF213KNR bigBed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF434RLK 12101503 ENCODE Processing Pipeline 7c05830102643192e58c0c5d080f4659 https://www.encodeproject.org/files/ENCFF213KNR/@@download/ENCFF213KNR.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF499ZBA bed narrowPeak optimal idr thresholded peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF424PYM, ENCFF434RLK, ENCFF869GAY 228036 ENCODE Processing Pipeline ef10d729f22f830013e00cf1b8659d85 https://www.encodeproject.org/files/ENCFF499ZBA/@@download/ENCFF499ZBA.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF793YUM bed narrowPeak conservative idr thresholded peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF424PYM, ENCFF434RLK, ENCFF869GAY 203765 ENCODE Processing Pipeline 0d5ffd63997bc31540857c5ab86981d8 https://www.encodeproject.org/files/ENCFF793YUM/@@download/ENCFF793YUM.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF654KQL bigBed narrowPeak optimal idr thresholded peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF499ZBA 436930 ENCODE Processing Pipeline 3f7bfec8864874f702597dca0d2b6fa2 https://www.encodeproject.org/files/ENCFF654KQL/@@download/ENCFF654KQL.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF208WLD bigBed narrowPeak conservative idr thresholded peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF793YUM 401328 ENCODE Processing Pipeline 073737ba4ca7b88694d713d1d84d7346 https://www.encodeproject.org/files/ENCFF208WLD/@@download/ENCFF208WLD.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF933ELS bigWig signal p-value ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF806KRN 1089728208 ENCODE Processing Pipeline b9e50e109dbfe24e50443000abc89f16 https://www.encodeproject.org/files/ENCFF933ELS/@@download/ENCFF933ELS.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF427ZIB bigWig signal p-value ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF532ZHO 1126843506 ENCODE Processing Pipeline 5baa819f6a793ae80f30823deb2605fc https://www.encodeproject.org/files/ENCFF427ZIB/@@download/ENCFF427ZIB.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF200ONF bigWig signal p-value ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF532ZHO, ENCFF806KRN 1391518007 ENCODE Processing Pipeline f3e24424a71ee425b0be3b87f847d436 https://www.encodeproject.org/files/ENCFF200ONF/@@download/ENCFF200ONF.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF067BYU bigWig fold change over control ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF806KRN 780740379 ENCODE Processing Pipeline b351f539f8d3c3deed24110494e3b387 https://www.encodeproject.org/files/ENCFF067BYU/@@download/ENCFF067BYU.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF603BQQ bigWig fold change over control ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF532ZHO 820847986 ENCODE Processing Pipeline 364f0fc755b4f3d4a3096607e221e063 https://www.encodeproject.org/files/ENCFF603BQQ/@@download/ENCFF603BQQ.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF402UZM bigWig fold change over control ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF532ZHO, ENCFF806KRN 1283767101 ENCODE Processing Pipeline d1cfd75e1e10b165e18f797159266b6d https://www.encodeproject.org/files/ENCFF402UZM/@@download/ENCFF402UZM.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF216KHO bed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF806KRN 5910176 ENCODE Processing Pipeline 40d3d7514044efd8001f18fd7caf080a https://www.encodeproject.org/files/ENCFF216KHO/@@download/ENCFF216KHO.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF579PAC bed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF532ZHO 6432380 ENCODE Processing Pipeline c792771f1312fb4ff36db6c98b6112c7 https://www.encodeproject.org/files/ENCFF579PAC/@@download/ENCFF579PAC.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF752TYG bed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF532ZHO, ENCFF806KRN 6700415 ENCODE Processing Pipeline f9b9dd03b54650d75b0d1989526ece76 https://www.encodeproject.org/files/ENCFF752TYG/@@download/ENCFF752TYG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF454PEW bigBed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF216KHO 11353944 ENCODE Processing Pipeline 219dbec8e3e1ed4eb00a0919c4a9be5a https://www.encodeproject.org/files/ENCFF454PEW/@@download/ENCFF454PEW.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF811OKV bigBed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF579PAC 13298009 ENCODE Processing Pipeline d95610720e78e562e52f57296d38ea21 https://www.encodeproject.org/files/ENCFF811OKV/@@download/ENCFF811OKV.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF865FZV bigBed narrowPeak peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF752TYG 13395870 ENCODE Processing Pipeline c96ce1b83768e2fb7fd82aa29ee6e461 https://www.encodeproject.org/files/ENCFF865FZV/@@download/ENCFF865FZV.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF840XRU bed narrowPeak conservative idr thresholded peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF216KHO, ENCFF579PAC, ENCFF752TYG 191814 ENCODE Processing Pipeline 227077a6fa382645eaa3007e51b9b303 https://www.encodeproject.org/files/ENCFF840XRU/@@download/ENCFF840XRU.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF330XSA bigBed narrowPeak conservative idr thresholded peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF840XRU 393612 ENCODE Processing Pipeline 54de2aa5aa92452ee243e25af950898f https://www.encodeproject.org/files/ENCFF330XSA/@@download/ENCFF330XSA.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF994CIT bed narrowPeak optimal idr thresholded peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF216KHO, ENCFF579PAC, ENCFF752TYG 214891 ENCODE Processing Pipeline b7bb80612164aea6a992366b2378b2da https://www.encodeproject.org/files/ENCFF994CIT/@@download/ENCFF994CIT.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF897NDR bigBed narrowPeak optimal idr thresholded peaks ENCSR988ZSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RERE-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF994CIT 426738 ENCODE Processing Pipeline 405004ce1ad70c6f090f9a35f8fadabd https://www.encodeproject.org/files/ENCFF897NDR/@@download/ENCFF897NDR.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF259MWS fastq reads ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2353986569 Richard Myers, HAIB 0be5345f31821771421c4963f1fa3d71 SRA:SRR5338656 https://www.encodeproject.org/files/ENCFF259MWS/@@download/ENCFF259MWS.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF128OQA fastq reads ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1496443477 Richard Myers, HAIB dd46ad6d8918da54797fa7aeabc0f3e5 SRA:SRR5338655 https://www.encodeproject.org/files/ENCFF128OQA/@@download/ENCFF128OQA.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF734TON bam unfiltered alignments ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF128OQA, ENCFF643CGH 1615109423 ENCODE Processing Pipeline 8d4b78950d63e3815d45b037d4aeb066 https://www.encodeproject.org/files/ENCFF734TON/@@download/ENCFF734TON.bam GRCh38 released antibody characterized with exemption ENCFF192CZJ bam unfiltered alignments ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF128OQA, ENCFF807MUK 1612190861 ENCODE Processing Pipeline b0a6aaabf87196fb63db60fb474b766e https://www.encodeproject.org/files/ENCFF192CZJ/@@download/ENCFF192CZJ.bam hg19 released antibody characterized with exemption ENCFF961TAB bam unfiltered alignments ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF259MWS, ENCFF643CGH 2609474126 ENCODE Processing Pipeline 64d2a87ff4a845da6a2da54ad75df8b7 https://www.encodeproject.org/files/ENCFF961TAB/@@download/ENCFF961TAB.bam GRCh38 released antibody characterized with exemption ENCFF927VOZ bam alignments ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF128OQA, ENCFF643CGH 1255002795 ENCODE Processing Pipeline 4da1553dc2e7baa9686d1b93f849807e https://www.encodeproject.org/files/ENCFF927VOZ/@@download/ENCFF927VOZ.bam GRCh38 released antibody characterized with exemption ENCFF571MOX bam alignments ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF128OQA, ENCFF807MUK 1254520134 ENCODE Processing Pipeline 50684e1267aec5ad00e77d326b9aa271 https://www.encodeproject.org/files/ENCFF571MOX/@@download/ENCFF571MOX.bam hg19 released antibody characterized with exemption ENCFF181SJU bam unfiltered alignments ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF259MWS, ENCFF807MUK 2604316084 ENCODE Processing Pipeline 05c77f04c6e57eabb664aa17089ae9e0 https://www.encodeproject.org/files/ENCFF181SJU/@@download/ENCFF181SJU.bam hg19 released antibody characterized with exemption ENCFF736DHC bam alignments ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF259MWS, ENCFF643CGH 2020247244 ENCODE Processing Pipeline a1c7d846b3114906d41f18303c6437c8 https://www.encodeproject.org/files/ENCFF736DHC/@@download/ENCFF736DHC.bam GRCh38 released antibody characterized with exemption ENCFF362WTD bam alignments ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF259MWS, ENCFF807MUK 2019266720 ENCODE Processing Pipeline 9d94a142d666f4016a857124ddab09c0 https://www.encodeproject.org/files/ENCFF362WTD/@@download/ENCFF362WTD.bam hg19 released antibody characterized with exemption ENCFF115BGO bigWig signal p-value ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF927VOZ 525937189 ENCODE Processing Pipeline 50c6eb8216b6d2c12055e37c0d6f3b51 https://www.encodeproject.org/files/ENCFF115BGO/@@download/ENCFF115BGO.bigWig GRCh38 released antibody characterized with exemption ENCFF584GSK bigWig signal p-value ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF736DHC 699753364 ENCODE Processing Pipeline 7b1b3326ffa2c483c315048bcaab60e7 https://www.encodeproject.org/files/ENCFF584GSK/@@download/ENCFF584GSK.bigWig GRCh38 released antibody characterized with exemption ENCFF437YML bigWig signal p-value ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF736DHC, ENCFF927VOZ 639462265 ENCODE Processing Pipeline 956f63620af4be5da463efab089f08e6 https://www.encodeproject.org/files/ENCFF437YML/@@download/ENCFF437YML.bigWig GRCh38 released antibody characterized with exemption ENCFF562FHO bigWig fold change over control ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF736DHC 782779813 ENCODE Processing Pipeline 737d1659536d414cc8791019680c976f https://www.encodeproject.org/files/ENCFF562FHO/@@download/ENCFF562FHO.bigWig GRCh38 released antibody characterized with exemption ENCFF488SDP bigWig fold change over control ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF927VOZ 445158097 ENCODE Processing Pipeline 54187d6a5198d04ca5175a5a7c867dfb https://www.encodeproject.org/files/ENCFF488SDP/@@download/ENCFF488SDP.bigWig GRCh38 released antibody characterized with exemption ENCFF366KTI bigWig fold change over control ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF736DHC, ENCFF927VOZ 984261021 ENCODE Processing Pipeline 9e2b38db41da6337cb036ddd84c2e8b1 https://www.encodeproject.org/files/ENCFF366KTI/@@download/ENCFF366KTI.bigWig GRCh38 released antibody characterized with exemption ENCFF185FGI bed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF736DHC 6921034 ENCODE Processing Pipeline 3d395e693613e0bd2ae31191930dea99 https://www.encodeproject.org/files/ENCFF185FGI/@@download/ENCFF185FGI.bed.gz GRCh38 released antibody characterized with exemption ENCFF157LPX bed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF927VOZ 5944305 ENCODE Processing Pipeline ad51ce3ee734670c8fc409a0782304a1 https://www.encodeproject.org/files/ENCFF157LPX/@@download/ENCFF157LPX.bed.gz GRCh38 released antibody characterized with exemption ENCFF300BOQ bigBed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF185FGI 12775153 ENCODE Processing Pipeline 192e98db3e30f1318f028c1007f4f278 https://www.encodeproject.org/files/ENCFF300BOQ/@@download/ENCFF300BOQ.bigBed GRCh38 released antibody characterized with exemption ENCFF735NEK bed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF736DHC, ENCFF927VOZ 6957933 ENCODE Processing Pipeline a97c4a4c9dc14b4bd85ad4dc4d59da31 https://www.encodeproject.org/files/ENCFF735NEK/@@download/ENCFF735NEK.bed.gz GRCh38 released antibody characterized with exemption ENCFF421HAZ bigBed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF157LPX 13099733 ENCODE Processing Pipeline 315ca43bb88db685a09c7287a7af60ab https://www.encodeproject.org/files/ENCFF421HAZ/@@download/ENCFF421HAZ.bigBed GRCh38 released antibody characterized with exemption ENCFF335XLJ bigBed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF735NEK 12923054 ENCODE Processing Pipeline 2bca733a68e1905cb236feb0f296fda3 https://www.encodeproject.org/files/ENCFF335XLJ/@@download/ENCFF335XLJ.bigBed GRCh38 released antibody characterized with exemption ENCFF303TLQ bed narrowPeak conservative idr thresholded peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF157LPX, ENCFF185FGI, ENCFF419RSJ, ENCFF735NEK 266870 ENCODE Processing Pipeline 3669b793f51ae40e0fb8fc7000f51b6d https://www.encodeproject.org/files/ENCFF303TLQ/@@download/ENCFF303TLQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF028TVD bigBed narrowPeak conservative idr thresholded peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF303TLQ 554261 ENCODE Processing Pipeline d6da1ae6fc7748442d93a60cd682b64a https://www.encodeproject.org/files/ENCFF028TVD/@@download/ENCFF028TVD.bigBed GRCh38 released antibody characterized with exemption ENCFF099RTI bigBed narrowPeak optimal idr thresholded peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF390RLO 638928 ENCODE Processing Pipeline e80fc7db1c9beb7f1098c75d126d9ef6 https://www.encodeproject.org/files/ENCFF099RTI/@@download/ENCFF099RTI.bigBed GRCh38 released antibody characterized with exemption ENCFF390RLO bed narrowPeak optimal idr thresholded peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF157LPX, ENCFF185FGI, ENCFF419RSJ, ENCFF735NEK 320425 ENCODE Processing Pipeline 0732a96d5e66e474253fd92e3ee4392d https://www.encodeproject.org/files/ENCFF390RLO/@@download/ENCFF390RLO.bed.gz GRCh38 released antibody characterized with exemption ENCFF204XZS bigWig signal p-value ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF362WTD 1262550140 ENCODE Processing Pipeline 8efc6140fd12a5379a1d65910798fd48 https://www.encodeproject.org/files/ENCFF204XZS/@@download/ENCFF204XZS.bigWig hg19 released antibody characterized with exemption ENCFF602PNO bigWig signal p-value ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF571MOX 1148568103 ENCODE Processing Pipeline b5138219e42234d22330eb795232f51b https://www.encodeproject.org/files/ENCFF602PNO/@@download/ENCFF602PNO.bigWig hg19 released antibody characterized with exemption ENCFF931INX bigWig signal p-value ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF362WTD, ENCFF571MOX 1616727385 ENCODE Processing Pipeline 83583c9987671de3f4b01908812f1b2c https://www.encodeproject.org/files/ENCFF931INX/@@download/ENCFF931INX.bigWig hg19 released antibody characterized with exemption ENCFF961TWQ bigWig fold change over control ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF362WTD 1366302889 ENCODE Processing Pipeline 39ea587f80d4f5ae414d9589916d6bc7 https://www.encodeproject.org/files/ENCFF961TWQ/@@download/ENCFF961TWQ.bigWig hg19 released antibody characterized with exemption ENCFF059TLA bigWig fold change over control ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF571MOX 897683112 ENCODE Processing Pipeline d342fd88f34fdcdc87812bcf0758491e https://www.encodeproject.org/files/ENCFF059TLA/@@download/ENCFF059TLA.bigWig hg19 released antibody characterized with exemption ENCFF136GRX bigWig fold change over control ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF362WTD, ENCFF571MOX 1590975061 ENCODE Processing Pipeline 9e59198dd8e59c773835f519df77a5c4 https://www.encodeproject.org/files/ENCFF136GRX/@@download/ENCFF136GRX.bigWig hg19 released antibody characterized with exemption ENCFF970JZW bed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF362WTD 7148166 ENCODE Processing Pipeline 9ce482f96aa7db6959fd7a521c5f66de https://www.encodeproject.org/files/ENCFF970JZW/@@download/ENCFF970JZW.bed.gz hg19 released antibody characterized with exemption ENCFF863YSM bed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF571MOX 6639422 ENCODE Processing Pipeline 164b51b4fd7027921f8ba66bff29db06 https://www.encodeproject.org/files/ENCFF863YSM/@@download/ENCFF863YSM.bed.gz hg19 released antibody characterized with exemption ENCFF160RBP bed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF362WTD, ENCFF571MOX 7138359 ENCODE Processing Pipeline cdaf219ac2d558678b1572719a588c9c https://www.encodeproject.org/files/ENCFF160RBP/@@download/ENCFF160RBP.bed.gz hg19 released antibody characterized with exemption ENCFF815WVV bigBed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF970JZW 12841358 ENCODE Processing Pipeline 87aabbc92e7b60c7921a8114232c3600 https://www.encodeproject.org/files/ENCFF815WVV/@@download/ENCFF815WVV.bigBed hg19 released antibody characterized with exemption ENCFF774LYH bigBed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF863YSM 13018826 ENCODE Processing Pipeline a5de5c12b666ef418c767fe0d4e2e077 https://www.encodeproject.org/files/ENCFF774LYH/@@download/ENCFF774LYH.bigBed hg19 released antibody characterized with exemption ENCFF851LOD bigBed narrowPeak peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF160RBP 12897850 ENCODE Processing Pipeline 42f2e0afb1d66abec0da032ee79a6d07 https://www.encodeproject.org/files/ENCFF851LOD/@@download/ENCFF851LOD.bigBed hg19 released antibody characterized with exemption ENCFF463UQF bed narrowPeak conservative idr thresholded peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF160RBP, ENCFF863YSM, ENCFF970JZW 280774 ENCODE Processing Pipeline 89e4764b29b9c9cea9695795dc98eeb4 https://www.encodeproject.org/files/ENCFF463UQF/@@download/ENCFF463UQF.bed.gz hg19 released antibody characterized with exemption ENCFF008FVU bigBed narrowPeak conservative idr thresholded peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF463UQF 597245 ENCODE Processing Pipeline 0b3ed35d7f38fb1936c2ec67e9f7be0f https://www.encodeproject.org/files/ENCFF008FVU/@@download/ENCFF008FVU.bigBed hg19 released antibody characterized with exemption ENCFF039GWV bed narrowPeak optimal idr thresholded peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF160RBP, ENCFF863YSM, ENCFF970JZW 301938 ENCODE Processing Pipeline 49619a3d351683415190c2ba07e05d2a https://www.encodeproject.org/files/ENCFF039GWV/@@download/ENCFF039GWV.bed.gz hg19 released antibody characterized with exemption ENCFF293LVR bigBed narrowPeak optimal idr thresholded peaks ENCSR372JXR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZNF511-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF039GWV 630437 ENCODE Processing Pipeline 7000be43aff59e47d133952e828ab905 https://www.encodeproject.org/files/ENCFF293LVR/@@download/ENCFF293LVR.bigBed hg19 released antibody characterized with exemption ENCFF403YQE fastq reads ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1162146839 Richard Myers, HAIB cda5ff8554a88a27c5919ef890a4e965 SRA:SRR5331262 https://www.encodeproject.org/files/ENCFF403YQE/@@download/ENCFF403YQE.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF064SPT fastq reads ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1447280684 Richard Myers, HAIB 04dd60afc750691d3ba11272a42fe05f SRA:SRR5331263 https://www.encodeproject.org/files/ENCFF064SPT/@@download/ENCFF064SPT.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF147GPM bam unfiltered alignments ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF403YQE, ENCFF807MUK 1243308040 ENCODE Processing Pipeline d1b79d706dadcb6dbb40ec5b865c9730 https://www.encodeproject.org/files/ENCFF147GPM/@@download/ENCFF147GPM.bam hg19 released antibody characterized with exemption, low read depth ENCFF859NCC bam unfiltered alignments ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF403YQE, ENCFF643CGH 1245427097 ENCODE Processing Pipeline c3a6be1bda62620b9642ef11ddc71beb https://www.encodeproject.org/files/ENCFF859NCC/@@download/ENCFF859NCC.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF282RXE bam unfiltered alignments ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF064SPT, ENCFF643CGH 1633759226 ENCODE Processing Pipeline 53d1fdc9aa149e5b55f1433249ea4c86 https://www.encodeproject.org/files/ENCFF282RXE/@@download/ENCFF282RXE.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF942LEC bam alignments ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF403YQE, ENCFF807MUK 991571982 ENCODE Processing Pipeline 05084dd416746d6bb988786ea208dd01 https://www.encodeproject.org/files/ENCFF942LEC/@@download/ENCFF942LEC.bam hg19 released antibody characterized with exemption, low read depth ENCFF889CRT bam unfiltered alignments ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF064SPT, ENCFF807MUK 1630757811 ENCODE Processing Pipeline 5e73b0093b1e494af2ad7e3a4ce86890 https://www.encodeproject.org/files/ENCFF889CRT/@@download/ENCFF889CRT.bam hg19 released antibody characterized with exemption, low read depth ENCFF195MMC bam alignments ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF403YQE, ENCFF643CGH 991843793 ENCODE Processing Pipeline 144f685d1f025615a67126dbfa181e51 https://www.encodeproject.org/files/ENCFF195MMC/@@download/ENCFF195MMC.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF031TWZ bam alignments ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF064SPT, ENCFF807MUK 1289660702 ENCODE Processing Pipeline 335adc6f486cb7ff8d89b38d2a08ff84 https://www.encodeproject.org/files/ENCFF031TWZ/@@download/ENCFF031TWZ.bam hg19 released antibody characterized with exemption, low read depth ENCFF371LTF bam alignments ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF064SPT, ENCFF643CGH 1290113177 ENCODE Processing Pipeline b6ed03f085f43a6fb93432fade2fea31 https://www.encodeproject.org/files/ENCFF371LTF/@@download/ENCFF371LTF.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF890DSY bigWig signal p-value ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF195MMC 496729163 ENCODE Processing Pipeline 6f5404c63fbf0a91d75bf96a56a2a962 https://www.encodeproject.org/files/ENCFF890DSY/@@download/ENCFF890DSY.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF526MWY bigWig signal p-value ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF371LTF 542465327 ENCODE Processing Pipeline 92ef332a8a8de9a43f0f5b2fa3d1f004 https://www.encodeproject.org/files/ENCFF526MWY/@@download/ENCFF526MWY.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF206WUO bigWig signal p-value ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF195MMC, ENCFF371LTF 673521778 ENCODE Processing Pipeline 3cf1b1da56eb4c9557327dbd9b1ab8ab https://www.encodeproject.org/files/ENCFF206WUO/@@download/ENCFF206WUO.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF607SEW bigWig fold change over control ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF371LTF 505669843 ENCODE Processing Pipeline 5b3baa674b2f8da7e2bf02d4ed8f68a0 https://www.encodeproject.org/files/ENCFF607SEW/@@download/ENCFF607SEW.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF390RDZ bigWig fold change over control ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF195MMC, ENCFF371LTF 772717275 ENCODE Processing Pipeline e820ba4b447458a9cd3e6f4d122b918f https://www.encodeproject.org/files/ENCFF390RDZ/@@download/ENCFF390RDZ.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF550FDW bigWig fold change over control ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF195MMC 421995883 ENCODE Processing Pipeline 9d3453dbd89d586c2a285c8006868ce3 https://www.encodeproject.org/files/ENCFF550FDW/@@download/ENCFF550FDW.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF362YAF bigBed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF189OLH 13005189 ENCODE Processing Pipeline 7b7f5d85b125ae3fe4a0ffad0eead0ba https://www.encodeproject.org/files/ENCFF362YAF/@@download/ENCFF362YAF.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF189OLH bed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF195MMC 5944669 ENCODE Processing Pipeline a42df1fe97a7fbc0199fb94bf0048e2b https://www.encodeproject.org/files/ENCFF189OLH/@@download/ENCFF189OLH.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF814ZUE bed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF371LTF 6272020 ENCODE Processing Pipeline 94c2ffc54c403c72fe267e961fa4a9ab https://www.encodeproject.org/files/ENCFF814ZUE/@@download/ENCFF814ZUE.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF624EYQ bed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF195MMC, ENCFF371LTF 6722007 ENCODE Processing Pipeline 4df409e1496ef00f321cf2182f4b9599 https://www.encodeproject.org/files/ENCFF624EYQ/@@download/ENCFF624EYQ.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF212YPZ bigBed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF814ZUE 12996014 ENCODE Processing Pipeline fb01d005d0c0f56b6f55ba45fb3d5230 https://www.encodeproject.org/files/ENCFF212YPZ/@@download/ENCFF212YPZ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF635MVU bigBed narrowPeak conservative idr thresholded peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF120LIC 765085 ENCODE Processing Pipeline 11dd2f4cc60c976036ab05d083702264 https://www.encodeproject.org/files/ENCFF635MVU/@@download/ENCFF635MVU.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF478OVU bed narrowPeak optimal idr thresholded peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF189OLH, ENCFF419RSJ, ENCFF624EYQ, ENCFF814ZUE 458228 ENCODE Processing Pipeline f14fe11888dd0225d07190df4aa1307d https://www.encodeproject.org/files/ENCFF478OVU/@@download/ENCFF478OVU.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF488KXN bigBed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF624EYQ 12925107 ENCODE Processing Pipeline fcd3b658b6d46848d24a2d8955fef65a https://www.encodeproject.org/files/ENCFF488KXN/@@download/ENCFF488KXN.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF120LIC bed narrowPeak conservative idr thresholded peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF189OLH, ENCFF419RSJ, ENCFF624EYQ, ENCFF814ZUE 370213 ENCODE Processing Pipeline 2ea3becaa7748493650d0be46f4cb878 https://www.encodeproject.org/files/ENCFF120LIC/@@download/ENCFF120LIC.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF106OIE bigBed narrowPeak optimal idr thresholded peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF478OVU 903528 ENCODE Processing Pipeline 48b7a973655c704969c808e20e90dd09 https://www.encodeproject.org/files/ENCFF106OIE/@@download/ENCFF106OIE.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF807JYO bigWig signal p-value ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF942LEC 1045082813 ENCODE Processing Pipeline 16f58684faa5542003e31ac420e0f9f1 https://www.encodeproject.org/files/ENCFF807JYO/@@download/ENCFF807JYO.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF430KNF bigWig signal p-value ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF031TWZ, ENCFF203ABR 1252172122 ENCODE Processing Pipeline 9467dbe83f90fc3b5af97bcb30732581 https://www.encodeproject.org/files/ENCFF430KNF/@@download/ENCFF430KNF.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF768ILD bigWig signal p-value ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF031TWZ, ENCFF203ABR, ENCFF942LEC 1491580312 ENCODE Processing Pipeline eb437ed51345808ce6cc8edef6313aa0 https://www.encodeproject.org/files/ENCFF768ILD/@@download/ENCFF768ILD.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF595GUE bigWig fold change over control ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF031TWZ, ENCFF203ABR 904310257 ENCODE Processing Pipeline 93563440f8c79375ad84f9134a810eb5 https://www.encodeproject.org/files/ENCFF595GUE/@@download/ENCFF595GUE.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF549IDP bigWig fold change over control ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF942LEC 808515248 ENCODE Processing Pipeline 7ebc5bee863346237f58cf6458231215 https://www.encodeproject.org/files/ENCFF549IDP/@@download/ENCFF549IDP.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF343WCZ bed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF942LEC 6526342 ENCODE Processing Pipeline d65e164e6f456a4f27abcbe844f3b8b1 https://www.encodeproject.org/files/ENCFF343WCZ/@@download/ENCFF343WCZ.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF856NOU bed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF031TWZ, ENCFF203ABR 6831716 ENCODE Processing Pipeline 5345b85afc989a1dbc03593dd173d48c https://www.encodeproject.org/files/ENCFF856NOU/@@download/ENCFF856NOU.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF991GWU bigWig fold change over control ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF031TWZ, ENCFF203ABR, ENCFF942LEC 1362769826 ENCODE Processing Pipeline b5afd48c072e79445af24696b9cdbc1f https://www.encodeproject.org/files/ENCFF991GWU/@@download/ENCFF991GWU.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF722ULF bed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF031TWZ, ENCFF203ABR, ENCFF942LEC 6983295 ENCODE Processing Pipeline 0f78523c5107b612a5f2b3ca31d5d9fc https://www.encodeproject.org/files/ENCFF722ULF/@@download/ENCFF722ULF.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF428TEC bigBed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF856NOU 12957373 ENCODE Processing Pipeline e285070cb365a77630f93b6578a71d3a https://www.encodeproject.org/files/ENCFF428TEC/@@download/ENCFF428TEC.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF386ERG bed narrowPeak conservative idr thresholded peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF343WCZ, ENCFF722ULF, ENCFF856NOU 360247 ENCODE Processing Pipeline 16768cf4e6d92c85892c5551ff256705 https://www.encodeproject.org/files/ENCFF386ERG/@@download/ENCFF386ERG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF628YUU bigBed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF722ULF 12849901 ENCODE Processing Pipeline 9cb699ea10d09acb02e61f6d3416544c https://www.encodeproject.org/files/ENCFF628YUU/@@download/ENCFF628YUU.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF673DQA bigBed narrowPeak peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF343WCZ 12946964 ENCODE Processing Pipeline da4d2e67981baec039c59e007179f86f https://www.encodeproject.org/files/ENCFF673DQA/@@download/ENCFF673DQA.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF983MSP bed narrowPeak optimal idr thresholded peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF343WCZ, ENCFF722ULF, ENCFF856NOU 450779 ENCODE Processing Pipeline 7ef745d04ab3f726e6605f838187bf7a https://www.encodeproject.org/files/ENCFF983MSP/@@download/ENCFF983MSP.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF873LCC bigBed narrowPeak conservative idr thresholded peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF386ERG 636411 ENCODE Processing Pipeline 8375bcc759f60e33fa78d38abf93f7ad https://www.encodeproject.org/files/ENCFF873LCC/@@download/ENCFF873LCC.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF770DTU bigBed narrowPeak optimal idr thresholded peaks ENCSR117CHD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HOMEZ-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF983MSP 938819 ENCODE Processing Pipeline 30deedda420a5373f331970b318f7f09 https://www.encodeproject.org/files/ENCFF770DTU/@@download/ENCFF770DTU.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF352WCY fastq reads ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1324308629 Richard Myers, HAIB 90853bf8401b2d4902e2c524f6d312f7 SRA:SRR5338906 https://www.encodeproject.org/files/ENCFF352WCY/@@download/ENCFF352WCY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF823JNT fastq reads ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1394423875 Richard Myers, HAIB c42c9930fe1359d1f8b7db5ed4b82be6 SRA:SRR5338907 https://www.encodeproject.org/files/ENCFF823JNT/@@download/ENCFF823JNT.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF848JSC bam unfiltered alignments ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF352WCY, ENCFF643CGH 1576810370 ENCODE Processing Pipeline acffbf89abf83af23f76c05d08bd6617 https://www.encodeproject.org/files/ENCFF848JSC/@@download/ENCFF848JSC.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF703SXU bam unfiltered alignments ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF823JNT 1633358757 ENCODE Processing Pipeline 4190340a60a5f2fda8b14e6ab41e2d86 https://www.encodeproject.org/files/ENCFF703SXU/@@download/ENCFF703SXU.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF969UPC bam unfiltered alignments ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF823JNT 1630059602 ENCODE Processing Pipeline 72357b64f0d5c78ff451b54eddc02db9 https://www.encodeproject.org/files/ENCFF969UPC/@@download/ENCFF969UPC.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF947JHU bam unfiltered alignments ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF352WCY, ENCFF807MUK 1572742103 ENCODE Processing Pipeline 66bae589fb2444e539037bb0dcc1164b https://www.encodeproject.org/files/ENCFF947JHU/@@download/ENCFF947JHU.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF310MZC bam alignments ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF823JNT 1204387995 ENCODE Processing Pipeline f6007eef6258e1cfba741299a9ba1655 https://www.encodeproject.org/files/ENCFF310MZC/@@download/ENCFF310MZC.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF924HFP bam alignments ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF352WCY, ENCFF643CGH 1170055517 ENCODE Processing Pipeline 0fe0059fd7312859063fce2222627d5b https://www.encodeproject.org/files/ENCFF924HFP/@@download/ENCFF924HFP.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF023XMW bam alignments ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF823JNT 1204878534 ENCODE Processing Pipeline b3f2d50545205ab07605f44daf9c935c https://www.encodeproject.org/files/ENCFF023XMW/@@download/ENCFF023XMW.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF597IWX bam alignments ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF352WCY, ENCFF807MUK 1169143059 ENCODE Processing Pipeline 1a88a1d1778d063b94479897f5c3c358 https://www.encodeproject.org/files/ENCFF597IWX/@@download/ENCFF597IWX.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF055MSO bigWig signal p-value ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF924HFP 534569924 ENCODE Processing Pipeline 690eb7dbecc391e972f753eebd5d7005 https://www.encodeproject.org/files/ENCFF055MSO/@@download/ENCFF055MSO.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF515QIR bigWig signal p-value ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF023XMW 541380933 ENCODE Processing Pipeline ad49a76ef1a16c147f3b4c9e43997e2c https://www.encodeproject.org/files/ENCFF515QIR/@@download/ENCFF515QIR.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF467IEW bigWig fold change over control ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF023XMW 480623006 ENCODE Processing Pipeline 17cca038b73f449c377bbfb7e8658d6a https://www.encodeproject.org/files/ENCFF467IEW/@@download/ENCFF467IEW.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF684NSX bigWig signal p-value ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF023XMW, ENCFF924HFP 643539204 ENCODE Processing Pipeline c2bb0d2ce923c1c79f7105dce444e1b9 https://www.encodeproject.org/files/ENCFF684NSX/@@download/ENCFF684NSX.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF131HKB bigWig fold change over control ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF924HFP 463726832 ENCODE Processing Pipeline 7c1e8ad72395c186c1a7dba68c28d4d0 https://www.encodeproject.org/files/ENCFF131HKB/@@download/ENCFF131HKB.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF914BGC bigWig fold change over control ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF023XMW, ENCFF924HFP 793383262 ENCODE Processing Pipeline 3e1daa39ce37a3d021ebe71e534a0b82 https://www.encodeproject.org/files/ENCFF914BGC/@@download/ENCFF914BGC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF349RRK bed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF023XMW 6177906 ENCODE Processing Pipeline 7169811ed94548f2c520a5b03487f5c2 https://www.encodeproject.org/files/ENCFF349RRK/@@download/ENCFF349RRK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF283VFX bed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF924HFP 5736508 ENCODE Processing Pipeline 4709bc0212d5bf69a80e222461914a48 https://www.encodeproject.org/files/ENCFF283VFX/@@download/ENCFF283VFX.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF080DKP bed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF023XMW, ENCFF924HFP 6733688 ENCODE Processing Pipeline d94d6111fa10df06f2403857e2970156 https://www.encodeproject.org/files/ENCFF080DKP/@@download/ENCFF080DKP.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF524KVC bigBed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF349RRK 12925204 ENCODE Processing Pipeline 48872071500a305bb6caaa385e2f4e2b https://www.encodeproject.org/files/ENCFF524KVC/@@download/ENCFF524KVC.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF942WOD bigBed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF283VFX 13182507 ENCODE Processing Pipeline f35a875ac3c7ca3d461333c800119838 https://www.encodeproject.org/files/ENCFF942WOD/@@download/ENCFF942WOD.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF286IVV bigBed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF080DKP 13045727 ENCODE Processing Pipeline 53e7d255b7e0708d1b403c3e4220cfac https://www.encodeproject.org/files/ENCFF286IVV/@@download/ENCFF286IVV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF261LSG bed narrowPeak conservative idr thresholded peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF080DKP, ENCFF283VFX, ENCFF349RRK, ENCFF419RSJ 306462 ENCODE Processing Pipeline 94bbea0b742cb787554ec08c71c6543e https://www.encodeproject.org/files/ENCFF261LSG/@@download/ENCFF261LSG.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF263GGJ bigBed narrowPeak conservative idr thresholded peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF261LSG 634075 ENCODE Processing Pipeline 1ff7e69c8bb978691d75a4dee87efed4 https://www.encodeproject.org/files/ENCFF263GGJ/@@download/ENCFF263GGJ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF186JAO bed narrowPeak optimal idr thresholded peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF080DKP, ENCFF283VFX, ENCFF349RRK, ENCFF419RSJ 402438 ENCODE Processing Pipeline 0371dbbe63d2165e722529096473a935 https://www.encodeproject.org/files/ENCFF186JAO/@@download/ENCFF186JAO.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF764OWU bigBed narrowPeak optimal idr thresholded peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF186JAO 783794 ENCODE Processing Pipeline 6818870afccb06a699a0a5be69f42518 https://www.encodeproject.org/files/ENCFF764OWU/@@download/ENCFF764OWU.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF159KLJ bigWig signal p-value ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF310MZC 1132251539 ENCODE Processing Pipeline cff85a32b8bba43fcbf35d652e43ee48 https://www.encodeproject.org/files/ENCFF159KLJ/@@download/ENCFF159KLJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF757NQY bigWig signal p-value ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF597IWX 1176537563 ENCODE Processing Pipeline 752405d0ddabe69cd00b8e504edb151f https://www.encodeproject.org/files/ENCFF757NQY/@@download/ENCFF757NQY.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF381EAO bigWig signal p-value ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF310MZC, ENCFF597IWX 1423771691 ENCODE Processing Pipeline 1d435b8b80970004f5c2ea24de674587 https://www.encodeproject.org/files/ENCFF381EAO/@@download/ENCFF381EAO.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF809PSS bigWig fold change over control ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF310MZC 845943961 ENCODE Processing Pipeline 3187561cfddd39440174c565e09f26b5 https://www.encodeproject.org/files/ENCFF809PSS/@@download/ENCFF809PSS.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF704TAT bigWig fold change over control ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF597IWX 993987075 ENCODE Processing Pipeline aa6d4a0f458f1c5b96d0f47073fc2c4a https://www.encodeproject.org/files/ENCFF704TAT/@@download/ENCFF704TAT.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF398CCH bigWig fold change over control ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF310MZC, ENCFF597IWX 1331939736 ENCODE Processing Pipeline d0f80ea7c02a18bcdcad12130d8bd5c3 https://www.encodeproject.org/files/ENCFF398CCH/@@download/ENCFF398CCH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF003NLI bed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF310MZC 6570162 ENCODE Processing Pipeline 9417575352a76fdd1e0faf53dba063ba https://www.encodeproject.org/files/ENCFF003NLI/@@download/ENCFF003NLI.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF698JWD bed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF597IWX 6699517 ENCODE Processing Pipeline 6fa2e25ecb6aa890d6760da657eef1fa https://www.encodeproject.org/files/ENCFF698JWD/@@download/ENCFF698JWD.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF941APZ bigBed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF003NLI 12771785 ENCODE Processing Pipeline 2b0ad983753e16493e8913f792d5be0a https://www.encodeproject.org/files/ENCFF941APZ/@@download/ENCFF941APZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF672NHK bed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF310MZC, ENCFF597IWX 7051707 ENCODE Processing Pipeline 5b34738f2f7b3cc9f7dce3611d324f7a https://www.encodeproject.org/files/ENCFF672NHK/@@download/ENCFF672NHK.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF137PXZ bigBed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF698JWD 13089367 ENCODE Processing Pipeline 3aca5302afcc4530382ac67b3b301020 https://www.encodeproject.org/files/ENCFF137PXZ/@@download/ENCFF137PXZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF233BHF bigBed narrowPeak peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF672NHK 12933567 ENCODE Processing Pipeline dae0d466678afd1449cd9d0bad5eaf03 https://www.encodeproject.org/files/ENCFF233BHF/@@download/ENCFF233BHF.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF621XKU bed narrowPeak conservative idr thresholded peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF003NLI, ENCFF672NHK, ENCFF698JWD 260050 ENCODE Processing Pipeline 89a66a8d1183de925d4c335d2ee72181 https://www.encodeproject.org/files/ENCFF621XKU/@@download/ENCFF621XKU.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF843WQE bigBed narrowPeak conservative idr thresholded peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF621XKU 483348 ENCODE Processing Pipeline a3d0267ecb30890c4ce521ccb2ac5d27 https://www.encodeproject.org/files/ENCFF843WQE/@@download/ENCFF843WQE.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF838IUE bed narrowPeak optimal idr thresholded peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF003NLI, ENCFF672NHK, ENCFF698JWD 371369 ENCODE Processing Pipeline 0a37c5b68c207e118391e5e63198214c https://www.encodeproject.org/files/ENCFF838IUE/@@download/ENCFF838IUE.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF848CGW bigBed narrowPeak optimal idr thresholded peaks ENCSR531VIJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MIER3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF838IUE 774325 ENCODE Processing Pipeline a90a0f07cfe4751566b39146eaaf707e https://www.encodeproject.org/files/ENCFF848CGW/@@download/ENCFF848CGW.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF118UPE fastq reads ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1161479017 Richard Myers, HAIB 34eac133dca372072a63292d77ebf10e SRA:SRR5339107 https://www.encodeproject.org/files/ENCFF118UPE/@@download/ENCFF118UPE.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF039MUL fastq reads ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1705490081 Richard Myers, HAIB f85571476eaeee69ed238d2983334cb3 SRA:SRR5339106 https://www.encodeproject.org/files/ENCFF039MUL/@@download/ENCFF039MUL.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF822PEP bam unfiltered alignments ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF039MUL, ENCFF643CGH 1989539862 ENCODE Processing Pipeline 3357364d3ac2642f9a6852c1bd721774 https://www.encodeproject.org/files/ENCFF822PEP/@@download/ENCFF822PEP.bam GRCh38 released antibody characterized with exemption ENCFF959PDP bam unfiltered alignments ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF118UPE, ENCFF643CGH 1405639123 ENCODE Processing Pipeline df5f8552d5176bc9c02c3ff7f67d0cce https://www.encodeproject.org/files/ENCFF959PDP/@@download/ENCFF959PDP.bam GRCh38 released antibody characterized with exemption ENCFF149IMC bam unfiltered alignments ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF118UPE, ENCFF807MUK 1402390812 ENCODE Processing Pipeline b2a2287f4cc0003f3f2a87f6aac909f0 https://www.encodeproject.org/files/ENCFF149IMC/@@download/ENCFF149IMC.bam hg19 released antibody characterized with exemption ENCFF506EAM bam unfiltered alignments ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF039MUL, ENCFF807MUK 1983963761 ENCODE Processing Pipeline a78021eeeb55da78bdfd3146e3d48b03 https://www.encodeproject.org/files/ENCFF506EAM/@@download/ENCFF506EAM.bam hg19 released antibody characterized with exemption ENCFF519JXW bam alignments ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF118UPE, ENCFF643CGH 1085955562 ENCODE Processing Pipeline 2d02807170eaad3c08a3af9845b366de https://www.encodeproject.org/files/ENCFF519JXW/@@download/ENCFF519JXW.bam GRCh38 released antibody characterized with exemption ENCFF459SLH bam alignments ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF118UPE, ENCFF807MUK 1085375818 ENCODE Processing Pipeline c02868f40a07de02eace94d2513f1f41 https://www.encodeproject.org/files/ENCFF459SLH/@@download/ENCFF459SLH.bam hg19 released antibody characterized with exemption ENCFF632STR bam alignments ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF039MUL, ENCFF643CGH 1516805378 ENCODE Processing Pipeline ba2a7e48f6396bc11591013a7950039e https://www.encodeproject.org/files/ENCFF632STR/@@download/ENCFF632STR.bam GRCh38 released antibody characterized with exemption ENCFF805RHS bam alignments ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF039MUL, ENCFF807MUK 1515774464 ENCODE Processing Pipeline 0dbb12b8959b660bf0a8cd6acdd8dd12 https://www.encodeproject.org/files/ENCFF805RHS/@@download/ENCFF805RHS.bam hg19 released antibody characterized with exemption ENCFF100ICW bigWig signal p-value ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF519JXW 581611219 ENCODE Processing Pipeline 37c3d509d5d9126c7330c5ce64be582b https://www.encodeproject.org/files/ENCFF100ICW/@@download/ENCFF100ICW.bigWig GRCh38 released antibody characterized with exemption ENCFF426KIU bigWig signal p-value ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF632STR 516893173 ENCODE Processing Pipeline 21baba6da88e0241c9f40a5c64b4e99c https://www.encodeproject.org/files/ENCFF426KIU/@@download/ENCFF426KIU.bigWig GRCh38 released antibody characterized with exemption ENCFF701SES bigWig fold change over control ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF519JXW 412638101 ENCODE Processing Pipeline 66d7ae9a59b6edc8a0895178823ab8bb https://www.encodeproject.org/files/ENCFF701SES/@@download/ENCFF701SES.bigWig GRCh38 released antibody characterized with exemption ENCFF618LAV bigWig signal p-value ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF519JXW, ENCFF632STR 671224076 ENCODE Processing Pipeline 509ecee68e8124308648d1c2c5a7a7fc https://www.encodeproject.org/files/ENCFF618LAV/@@download/ENCFF618LAV.bigWig GRCh38 released antibody characterized with exemption ENCFF284NDM bigWig fold change over control ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF632STR 608210574 ENCODE Processing Pipeline f933a5df2779aff1095bfcfaedbc2f80 https://www.encodeproject.org/files/ENCFF284NDM/@@download/ENCFF284NDM.bigWig GRCh38 released antibody characterized with exemption ENCFF367BNC bigWig fold change over control ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF519JXW, ENCFF632STR 849613708 ENCODE Processing Pipeline 6e4e511096de71dafc1ed3a21c272661 https://www.encodeproject.org/files/ENCFF367BNC/@@download/ENCFF367BNC.bigWig GRCh38 released antibody characterized with exemption ENCFF242PKV bed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF519JXW 6170649 ENCODE Processing Pipeline 15571e8b799fa6921fa8c138c1014e28 https://www.encodeproject.org/files/ENCFF242PKV/@@download/ENCFF242PKV.bed.gz GRCh38 released antibody characterized with exemption ENCFF171JNC bed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF632STR 6645615 ENCODE Processing Pipeline aa331066de1b3b2b3e8d51ce1b916da4 https://www.encodeproject.org/files/ENCFF171JNC/@@download/ENCFF171JNC.bed.gz GRCh38 released antibody characterized with exemption ENCFF905PXO bed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF519JXW, ENCFF632STR 6992987 ENCODE Processing Pipeline dbf106075675d33cea02e2b8e53526fd https://www.encodeproject.org/files/ENCFF905PXO/@@download/ENCFF905PXO.bed.gz GRCh38 released antibody characterized with exemption ENCFF685IEP bigBed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF242PKV 12974993 ENCODE Processing Pipeline 1213b7afd112389b15bb5a22dee495e0 https://www.encodeproject.org/files/ENCFF685IEP/@@download/ENCFF685IEP.bigBed GRCh38 released antibody characterized with exemption ENCFF974JZY bigBed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF171JNC 12868704 ENCODE Processing Pipeline 844cfb70232567c7de0a9c2555788262 https://www.encodeproject.org/files/ENCFF974JZY/@@download/ENCFF974JZY.bigBed GRCh38 released antibody characterized with exemption ENCFF894JMC bigBed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF905PXO 12884333 ENCODE Processing Pipeline 3875eae424321e4482fa452d2403fadc https://www.encodeproject.org/files/ENCFF894JMC/@@download/ENCFF894JMC.bigBed GRCh38 released antibody characterized with exemption ENCFF249MMP bed narrowPeak conservative idr thresholded peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF171JNC, ENCFF242PKV, ENCFF419RSJ, ENCFF905PXO 465837 ENCODE Processing Pipeline fd1bbbfb4d0e0160c8e33adfcc4ad745 https://www.encodeproject.org/files/ENCFF249MMP/@@download/ENCFF249MMP.bed.gz GRCh38 released antibody characterized with exemption ENCFF016HZH bigBed narrowPeak conservative idr thresholded peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF249MMP 1044736 ENCODE Processing Pipeline b9909d3570624327cf3549b2cd90b340 https://www.encodeproject.org/files/ENCFF016HZH/@@download/ENCFF016HZH.bigBed GRCh38 released antibody characterized with exemption ENCFF092ZIZ bed narrowPeak optimal idr thresholded peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF171JNC, ENCFF242PKV, ENCFF419RSJ, ENCFF905PXO 500220 ENCODE Processing Pipeline 74b7ab810e50d9614ea4238d1f6b5b56 https://www.encodeproject.org/files/ENCFF092ZIZ/@@download/ENCFF092ZIZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF862QTV bigBed narrowPeak optimal idr thresholded peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF092ZIZ 1105412 ENCODE Processing Pipeline 6b4812139dfe0be3a1ddfa8f88c1c31c https://www.encodeproject.org/files/ENCFF862QTV/@@download/ENCFF862QTV.bigBed GRCh38 released antibody characterized with exemption ENCFF718BGT bigWig signal p-value ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF459SLH 1082449024 ENCODE Processing Pipeline c99830935376acf5ad61ca73754d3bdd https://www.encodeproject.org/files/ENCFF718BGT/@@download/ENCFF718BGT.bigWig hg19 released antibody characterized with exemption ENCFF394PLR bigWig signal p-value ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF805RHS 1206503733 ENCODE Processing Pipeline b56c68efd3f56303fc696f272f52acf7 https://www.encodeproject.org/files/ENCFF394PLR/@@download/ENCFF394PLR.bigWig hg19 released antibody characterized with exemption ENCFF356REE bigWig signal p-value ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF459SLH, ENCFF805RHS 1477574928 ENCODE Processing Pipeline a980e5fea4eefe2b48e72bff998154b0 https://www.encodeproject.org/files/ENCFF356REE/@@download/ENCFF356REE.bigWig hg19 released antibody characterized with exemption ENCFF444KXY bigWig fold change over control ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF459SLH 798953259 ENCODE Processing Pipeline 0cbf037d4dee523b19fd03764d13c013 https://www.encodeproject.org/files/ENCFF444KXY/@@download/ENCFF444KXY.bigWig hg19 released antibody characterized with exemption ENCFF647LFO bigWig fold change over control ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF805RHS 1027720831 ENCODE Processing Pipeline 507951be046f4f422ffa2cded28007e3 https://www.encodeproject.org/files/ENCFF647LFO/@@download/ENCFF647LFO.bigWig hg19 released antibody characterized with exemption ENCFF539XWR bigWig fold change over control ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF459SLH, ENCFF805RHS 1424702497 ENCODE Processing Pipeline 1c134a9df8aca016ee8cdcd15908936f https://www.encodeproject.org/files/ENCFF539XWR/@@download/ENCFF539XWR.bigWig hg19 released antibody characterized with exemption ENCFF292NEY bed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF459SLH 6756387 ENCODE Processing Pipeline 623da1cbb5b55ef34e2f87f21ae1bb31 https://www.encodeproject.org/files/ENCFF292NEY/@@download/ENCFF292NEY.bed.gz hg19 released antibody characterized with exemption ENCFF020AAE bigBed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF292NEY 12973638 ENCODE Processing Pipeline 4db924d972716046908d8ce17dcb760d https://www.encodeproject.org/files/ENCFF020AAE/@@download/ENCFF020AAE.bigBed hg19 released antibody characterized with exemption ENCFF401IHO bed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF805RHS 7017854 ENCODE Processing Pipeline 79ae812ed183bdf0f04c2100e22121fd https://www.encodeproject.org/files/ENCFF401IHO/@@download/ENCFF401IHO.bed.gz hg19 released antibody characterized with exemption ENCFF143HUI bed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF459SLH, ENCFF805RHS 7172300 ENCODE Processing Pipeline 2add885ec837ec4802efefe33bb82f64 https://www.encodeproject.org/files/ENCFF143HUI/@@download/ENCFF143HUI.bed.gz hg19 released antibody characterized with exemption ENCFF112MBC bed narrowPeak conservative idr thresholded peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF143HUI, ENCFF292NEY, ENCFF401IHO 459202 ENCODE Processing Pipeline cfdbaab0aa6ee33daa3ccbfef5f1dc44 https://www.encodeproject.org/files/ENCFF112MBC/@@download/ENCFF112MBC.bed.gz hg19 released antibody characterized with exemption ENCFF071DQM bigBed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF143HUI 12881588 ENCODE Processing Pipeline 2543edaf30fdb5c4d81d74c94acfc2ec https://www.encodeproject.org/files/ENCFF071DQM/@@download/ENCFF071DQM.bigBed hg19 released antibody characterized with exemption ENCFF344PUT bigBed narrowPeak peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF401IHO 12880571 ENCODE Processing Pipeline 9f9128a26b11a2996689e0895b3dc76d https://www.encodeproject.org/files/ENCFF344PUT/@@download/ENCFF344PUT.bigBed hg19 released antibody characterized with exemption ENCFF298KRR bigBed narrowPeak conservative idr thresholded peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF112MBC 1066338 ENCODE Processing Pipeline e6a25f5593099bb9af05da044c4dcfec https://www.encodeproject.org/files/ENCFF298KRR/@@download/ENCFF298KRR.bigBed hg19 released antibody characterized with exemption ENCFF226RAW bed narrowPeak optimal idr thresholded peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF143HUI, ENCFF292NEY, ENCFF401IHO 500926 ENCODE Processing Pipeline 26d04c290326d16bad54297f63204b21 https://www.encodeproject.org/files/ENCFF226RAW/@@download/ENCFF226RAW.bed.gz hg19 released antibody characterized with exemption ENCFF695MFG bigBed narrowPeak optimal idr thresholded peaks ENCSR670YPQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-DMAP1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF226RAW 1139601 ENCODE Processing Pipeline 88d6de889014e8f7c8fbd4126b9e89d9 https://www.encodeproject.org/files/ENCFF695MFG/@@download/ENCFF695MFG.bigBed hg19 released antibody characterized with exemption ENCFF038RNL fastq reads ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 1512828529 Richard Myers, HAIB 15b34a6cdf8369ad4c160b007136bb57 SRA:SRR5331481 https://www.encodeproject.org/files/ENCFF038RNL/@@download/ENCFF038RNL.fastq.gz HiSeq 2000 /files/ENCFF255HDL/ released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF853ECX fastq reads ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1147855608 Richard Myers, HAIB eefb0cf5ceedc28645c681844609a33f SRA:SRR5331480 https://www.encodeproject.org/files/ENCFF853ECX/@@download/ENCFF853ECX.fastq.gz HiSeq 2000 /files/ENCFF255HDL/ released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF374DQB bam alignments ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF807MUK, ENCFF853ECX 950555468 ENCODE Processing Pipeline 26437acedcdd92077acadbd3c3b9f478 https://www.encodeproject.org/files/ENCFF374DQB/@@download/ENCFF374DQB.bam hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF296PIX bam alignments ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF038RNL, ENCFF807MUK 1222924444 ENCODE Processing Pipeline c7747323d99f341f65dc5f4b49a57426 https://www.encodeproject.org/files/ENCFF296PIX/@@download/ENCFF296PIX.bam hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF022JFK bigWig signal p-value ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF374DQB, ENCFF927ZZQ 414876752 ENCODE Processing Pipeline 1b8d5338c7fabcb0ef742a9e90a7d051 https://www.encodeproject.org/files/ENCFF022JFK/@@download/ENCFF022JFK.bigWig hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF299JHQ bigWig signal p-value ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF296PIX, ENCFF927ZZQ 430868989 ENCODE Processing Pipeline abca703ce91012962883a0eca052ee09 https://www.encodeproject.org/files/ENCFF299JHQ/@@download/ENCFF299JHQ.bigWig hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF456QYH bigWig fold change over control ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF374DQB, ENCFF927ZZQ 448085091 ENCODE Processing Pipeline 88d24889b54733a457d9df3831d457f3 https://www.encodeproject.org/files/ENCFF456QYH/@@download/ENCFF456QYH.bigWig hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF422YCK bigWig fold change over control ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF296PIX, ENCFF927ZZQ 549121831 ENCODE Processing Pipeline 6864b01dd95261478537e8f78171be0d https://www.encodeproject.org/files/ENCFF422YCK/@@download/ENCFF422YCK.bigWig hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF678BIR bigWig signal p-value ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF296PIX, ENCFF374DQB, ENCFF927ZZQ 384244293 ENCODE Processing Pipeline 11c52014108e18957ee376294fd49e24 https://www.encodeproject.org/files/ENCFF678BIR/@@download/ENCFF678BIR.bigWig hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF705EEN bed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF296PIX, ENCFF927ZZQ 6065843 ENCODE Processing Pipeline 7aa7bb6b33401d221d382afeac70d737 https://www.encodeproject.org/files/ENCFF705EEN/@@download/ENCFF705EEN.bed.gz hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF368XHC bigWig fold change over control ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF296PIX, ENCFF374DQB, ENCFF927ZZQ 799819344 ENCODE Processing Pipeline acdb02f20d2ad7830d2aba1289458fd0 https://www.encodeproject.org/files/ENCFF368XHC/@@download/ENCFF368XHC.bigWig hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF246FCW bed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF374DQB, ENCFF927ZZQ 5947796 ENCODE Processing Pipeline adda5de0829bd5fa4cb56dd603a5e9aa https://www.encodeproject.org/files/ENCFF246FCW/@@download/ENCFF246FCW.bed.gz hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF843PZW bed narrowPeak conservative idr thresholded peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF091AYC, ENCFF246FCW, ENCFF705EEN 234783 ENCODE Processing Pipeline 25b5032291d03d86c858a25c6c274cbc https://www.encodeproject.org/files/ENCFF843PZW/@@download/ENCFF843PZW.bed.gz hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF091AYC bed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF296PIX, ENCFF374DQB, ENCFF927ZZQ 6650693 ENCODE Processing Pipeline 5c503d140af9110a80d04ad0153239f2 https://www.encodeproject.org/files/ENCFF091AYC/@@download/ENCFF091AYC.bed.gz hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF947RNO bigBed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF091AYC 12971865 ENCODE Processing Pipeline 4ba0736d2735e228bde60fa31aba0e74 https://www.encodeproject.org/files/ENCFF947RNO/@@download/ENCFF947RNO.bigBed hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF418WDR bed narrowPeak optimal idr thresholded peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF091AYC, ENCFF246FCW, ENCFF705EEN 254742 ENCODE Processing Pipeline 66a153f2060d613665c656ed0f47f943 https://www.encodeproject.org/files/ENCFF418WDR/@@download/ENCFF418WDR.bed.gz hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF169RHQ bigBed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF705EEN 13211365 ENCODE Processing Pipeline c365156616bf2fe6118ad1674b2322c1 https://www.encodeproject.org/files/ENCFF169RHQ/@@download/ENCFF169RHQ.bigBed hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF154SBU bigBed narrowPeak conservative idr thresholded peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF843PZW 515061 ENCODE Processing Pipeline d779eca48654ffd45710f49d3a03d310 https://www.encodeproject.org/files/ENCFF154SBU/@@download/ENCFF154SBU.bigBed hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF584NWO bigBed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF246FCW 13134008 ENCODE Processing Pipeline 7547991d1db3aeceae57f1071fcdf133 https://www.encodeproject.org/files/ENCFF584NWO/@@download/ENCFF584NWO.bigBed hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF290XVZ bigBed narrowPeak optimal idr thresholded peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF418WDR 547413 ENCODE Processing Pipeline 956483e885962264b667e8df5678ab96 https://www.encodeproject.org/files/ENCFF290XVZ/@@download/ENCFF290XVZ.bigBed hg19 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF240XUB bam unfiltered alignments ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF853ECX 1272905197 ENCODE Processing Pipeline af6598eb0a5f36396c5f0434df1abc44 https://www.encodeproject.org/files/ENCFF240XUB/@@download/ENCFF240XUB.bam GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF014SFD bam unfiltered alignments ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF038RNL, ENCFF643CGH 1642644934 ENCODE Processing Pipeline a348fc1b8978eeb8827848869c2c7a7a https://www.encodeproject.org/files/ENCFF014SFD/@@download/ENCFF014SFD.bam GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF257JTU bam alignments ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF853ECX 950574006 ENCODE Processing Pipeline 3cae85e24247d657e72abd47332f0ca0 https://www.encodeproject.org/files/ENCFF257JTU/@@download/ENCFF257JTU.bam GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF214NPN bam alignments ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF038RNL, ENCFF643CGH 1222803815 ENCODE Processing Pipeline 7c03cf4c1c91e2e6a0872a519dee785f https://www.encodeproject.org/files/ENCFF214NPN/@@download/ENCFF214NPN.bam GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF405UNT bigWig signal p-value ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF257JTU, ENCFF999KIK 413200905 ENCODE Processing Pipeline 398b48a255ef597cde0a7ddd44a43024 https://www.encodeproject.org/files/ENCFF405UNT/@@download/ENCFF405UNT.bigWig GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF543HQF bigWig signal p-value ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF214NPN, ENCFF999KIK 426950785 ENCODE Processing Pipeline e5f1a0ed648062b119b496dccf5fbc84 https://www.encodeproject.org/files/ENCFF543HQF/@@download/ENCFF543HQF.bigWig GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF594KKL bigWig signal p-value ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF214NPN, ENCFF257JTU, ENCFF999KIK 381770390 ENCODE Processing Pipeline d78496e02280fc6523de573a17f716f3 https://www.encodeproject.org/files/ENCFF594KKL/@@download/ENCFF594KKL.bigWig GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF471WDT bigWig fold change over control ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF257JTU, ENCFF999KIK 445210314 ENCODE Processing Pipeline 466fefa40a14c9f459d6818caf6582b0 https://www.encodeproject.org/files/ENCFF471WDT/@@download/ENCFF471WDT.bigWig GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF194YNU bigWig fold change over control ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF214NPN, ENCFF999KIK 538970615 ENCODE Processing Pipeline 403410ee39e560fe6c0b192e839f6e07 https://www.encodeproject.org/files/ENCFF194YNU/@@download/ENCFF194YNU.bigWig GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF912JZP bigWig fold change over control ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF214NPN, ENCFF257JTU, ENCFF999KIK 798398462 ENCODE Processing Pipeline d138a527f9ee5d7c2244fb1c322b4ae2 https://www.encodeproject.org/files/ENCFF912JZP/@@download/ENCFF912JZP.bigWig GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF337JAD bed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF257JTU, ENCFF999KIK 5680877 ENCODE Processing Pipeline dda32f6dd4af945346b6166ea2280d4a https://www.encodeproject.org/files/ENCFF337JAD/@@download/ENCFF337JAD.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF342OEH bed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF214NPN, ENCFF999KIK 5836729 ENCODE Processing Pipeline 5eb27c56d7c4db67f29e7ec4bc9c66b3 https://www.encodeproject.org/files/ENCFF342OEH/@@download/ENCFF342OEH.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF670QNI bed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF214NPN, ENCFF257JTU, ENCFF999KIK 6472317 ENCODE Processing Pipeline 50aa27c5a3f300f018d7ad3c005d2493 https://www.encodeproject.org/files/ENCFF670QNI/@@download/ENCFF670QNI.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF698OIU bigBed narrowPeak conservative idr thresholded peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF130WFH 516575 ENCODE Processing Pipeline e52f36c2c4becd37c69cd6b72cac80e1 https://www.encodeproject.org/files/ENCFF698OIU/@@download/ENCFF698OIU.bigBed GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF130WFH bed narrowPeak conservative idr thresholded peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF337JAD, ENCFF342OEH, ENCFF419RSJ, ENCFF670QNI 234743 ENCODE Processing Pipeline cd370fdc91496589c0d911d382b23498 https://www.encodeproject.org/files/ENCFF130WFH/@@download/ENCFF130WFH.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF866QON bigBed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF337JAD 13079304 ENCODE Processing Pipeline 1b38f2c9e2d74a0db1c6086f660044aa https://www.encodeproject.org/files/ENCFF866QON/@@download/ENCFF866QON.bigBed GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF214GXA bigBed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF342OEH 13177567 ENCODE Processing Pipeline eac38b8181c65cf6de164359c5378770 https://www.encodeproject.org/files/ENCFF214GXA/@@download/ENCFF214GXA.bigBed GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF432MWV bigBed narrowPeak peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF670QNI 12973067 ENCODE Processing Pipeline ce4db14a94795a04534ce1f1972819a2 https://www.encodeproject.org/files/ENCFF432MWV/@@download/ENCFF432MWV.bigBed GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF491GZH bigBed narrowPeak optimal idr thresholded peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF914IWA 553367 ENCODE Processing Pipeline b51b8032ce64689e582c04c79948607a https://www.encodeproject.org/files/ENCFF491GZH/@@download/ENCFF491GZH.bigBed GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF914IWA bed narrowPeak optimal idr thresholded peaks ENCSR253OON ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF337JAD, ENCFF342OEH, ENCFF419RSJ, ENCFF670QNI 257821 ENCODE Processing Pipeline c1402abe42b28960cc6c6e0205699b5d https://www.encodeproject.org/files/ENCFF914IWA/@@download/ENCFF914IWA.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, mild to moderate bottlenecking missing mapped reads lengths, missing unfiltered alignments ENCFF480HVG fastq reads ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 3138118230 Richard Myers, HAIB c09beb38283fb3ba38c5708d65679b7a SRA:SRR5338744 https://www.encodeproject.org/files/ENCFF480HVG/@@download/ENCFF480HVG.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF393OKM fastq reads ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1527383022 Richard Myers, HAIB 230d4c42b0491c2107577fbc6d704e5f SRA:SRR5338743 https://www.encodeproject.org/files/ENCFF393OKM/@@download/ENCFF393OKM.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF489NGO bam unfiltered alignments ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF393OKM, ENCFF643CGH 1803057924 ENCODE Processing Pipeline 44704dbcf5d8de22201042953fc02a29 https://www.encodeproject.org/files/ENCFF489NGO/@@download/ENCFF489NGO.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF634MYM bam unfiltered alignments ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF393OKM, ENCFF807MUK 1798483696 ENCODE Processing Pipeline c3967b87c0aa50a8b1978100b0cdaeb2 https://www.encodeproject.org/files/ENCFF634MYM/@@download/ENCFF634MYM.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF888HFJ bam unfiltered alignments ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF480HVG, ENCFF643CGH 3489914809 ENCODE Processing Pipeline 8a081d70bfcdb71c95f3063c77ebe2a4 https://www.encodeproject.org/files/ENCFF888HFJ/@@download/ENCFF888HFJ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF937KRH bam unfiltered alignments ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF480HVG, ENCFF807MUK 3483747081 ENCODE Processing Pipeline d72e43197a1d3dc2a723043eee6ac348 https://www.encodeproject.org/files/ENCFF937KRH/@@download/ENCFF937KRH.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF656SPV bam alignments ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF393OKM, ENCFF643CGH 1354694527 ENCODE Processing Pipeline bbc1e8f502766b0d97bf7d499cf119c9 https://www.encodeproject.org/files/ENCFF656SPV/@@download/ENCFF656SPV.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF247ZPI bam alignments ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF480HVG, ENCFF643CGH 2239737346 ENCODE Processing Pipeline e1a6d94775d12050425106e13cab9f39 https://www.encodeproject.org/files/ENCFF247ZPI/@@download/ENCFF247ZPI.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF583KIK bam alignments ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF393OKM, ENCFF807MUK 1353811966 ENCODE Processing Pipeline 99874430d66f641ccfa4f977e41aca33 https://www.encodeproject.org/files/ENCFF583KIK/@@download/ENCFF583KIK.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF748DXR bam alignments ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF480HVG, ENCFF807MUK 2238764152 ENCODE Processing Pipeline 66225f4538ad464406b1cad0138de8f9 https://www.encodeproject.org/files/ENCFF748DXR/@@download/ENCFF748DXR.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF491DBE bigWig signal p-value ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF656SPV 532107808 ENCODE Processing Pipeline dd00b61e67cb217e4afa255c876cba31 https://www.encodeproject.org/files/ENCFF491DBE/@@download/ENCFF491DBE.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF620KZP bigWig signal p-value ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF247ZPI 679740398 ENCODE Processing Pipeline a05ce0e6e0fae1ee00c3c9a068611e22 https://www.encodeproject.org/files/ENCFF620KZP/@@download/ENCFF620KZP.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF958CDM bigWig signal p-value ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF247ZPI, ENCFF656SPV 663660247 ENCODE Processing Pipeline 9b393d17842711505bf910e2037c7818 https://www.encodeproject.org/files/ENCFF958CDM/@@download/ENCFF958CDM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF951AXM bigWig fold change over control ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF656SPV 508023574 ENCODE Processing Pipeline 0c20cd697e1722ea5cb45e555e7601b0 https://www.encodeproject.org/files/ENCFF951AXM/@@download/ENCFF951AXM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF819THW bigWig fold change over control ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF247ZPI 766273741 ENCODE Processing Pipeline bd1532f35ee467485e47cc6a6538ccf5 https://www.encodeproject.org/files/ENCFF819THW/@@download/ENCFF819THW.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF988EVV bigWig fold change over control ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF247ZPI, ENCFF656SPV 1053738566 ENCODE Processing Pipeline a90eb5a5c52f3b064b02835e3e12f6ed https://www.encodeproject.org/files/ENCFF988EVV/@@download/ENCFF988EVV.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF507RBR bed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF247ZPI 6899714 ENCODE Processing Pipeline 76f3da775075823da4f76678f48f20a9 https://www.encodeproject.org/files/ENCFF507RBR/@@download/ENCFF507RBR.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF801EHT bed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF656SPV 6170546 ENCODE Processing Pipeline 037411a7312d5869c88ce46229e7afed https://www.encodeproject.org/files/ENCFF801EHT/@@download/ENCFF801EHT.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF048YCA bed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF247ZPI, ENCFF656SPV 7125426 ENCODE Processing Pipeline 035c5eb1a9aeb26f6f4e0cd216b8f00b https://www.encodeproject.org/files/ENCFF048YCA/@@download/ENCFF048YCA.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF940PES bigBed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF507RBR 12769569 ENCODE Processing Pipeline e68f93e31be58fba387aa14c9862deea https://www.encodeproject.org/files/ENCFF940PES/@@download/ENCFF940PES.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF086ZJP bigBed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF801EHT 13187447 ENCODE Processing Pipeline fceade1c2194ad18f549e6baf72e6d1b https://www.encodeproject.org/files/ENCFF086ZJP/@@download/ENCFF086ZJP.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF427WDA bigBed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF048YCA 12821139 ENCODE Processing Pipeline 604d400bff15a13baaa29ac5f8f620a0 https://www.encodeproject.org/files/ENCFF427WDA/@@download/ENCFF427WDA.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF558FHZ bigBed narrowPeak conservative idr thresholded peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF163ZBA 868695 ENCODE Processing Pipeline 22ab3d6fffbfa7c58d403965a9657cec https://www.encodeproject.org/files/ENCFF558FHZ/@@download/ENCFF558FHZ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF163ZBA bed narrowPeak conservative idr thresholded peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF048YCA, ENCFF419RSJ, ENCFF507RBR, ENCFF801EHT 381278 ENCODE Processing Pipeline 59b830b9c1ca14b289b402aeb6c7d818 https://www.encodeproject.org/files/ENCFF163ZBA/@@download/ENCFF163ZBA.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF160XKY bed narrowPeak optimal idr thresholded peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF048YCA, ENCFF419RSJ, ENCFF507RBR, ENCFF801EHT 414501 ENCODE Processing Pipeline 6024166e8b62bdc27a0ae6b069b29101 https://www.encodeproject.org/files/ENCFF160XKY/@@download/ENCFF160XKY.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF202IOJ bigBed narrowPeak optimal idr thresholded peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF160XKY 932091 ENCODE Processing Pipeline d790a649cb8c1fcce29ab5b156acb95f https://www.encodeproject.org/files/ENCFF202IOJ/@@download/ENCFF202IOJ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF465DCQ bigWig signal p-value ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF748DXR 1309635110 ENCODE Processing Pipeline 0613c9a57aa06225a73304c94b788f09 https://www.encodeproject.org/files/ENCFF465DCQ/@@download/ENCFF465DCQ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF016BHP bigWig signal p-value ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF583KIK 1319450293 ENCODE Processing Pipeline 2290157a985da049843b8d7b1f86dd9c https://www.encodeproject.org/files/ENCFF016BHP/@@download/ENCFF016BHP.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF306QTI bigWig signal p-value ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF583KIK, ENCFF748DXR 1725879864 ENCODE Processing Pipeline 244957569aa20f075ba956ef6ac4d314 https://www.encodeproject.org/files/ENCFF306QTI/@@download/ENCFF306QTI.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF759NVI bigWig fold change over control ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF748DXR 1353043990 ENCODE Processing Pipeline 1114030740d1a1190be6d02274a4c4d8 https://www.encodeproject.org/files/ENCFF759NVI/@@download/ENCFF759NVI.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF289NKY bigWig fold change over control ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF583KIK 928063599 ENCODE Processing Pipeline 7a5c63f5a1e92760e3e4d14cc22abec7 https://www.encodeproject.org/files/ENCFF289NKY/@@download/ENCFF289NKY.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF375KVX bigWig fold change over control ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF583KIK, ENCFF748DXR 1740921937 ENCODE Processing Pipeline 98be838180f76942fd0204aa591851d4 https://www.encodeproject.org/files/ENCFF375KVX/@@download/ENCFF375KVX.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF438FDS bed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF748DXR 7141424 ENCODE Processing Pipeline def7ee0748db2c0c01a8537acbac52ad https://www.encodeproject.org/files/ENCFF438FDS/@@download/ENCFF438FDS.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF458LZF bed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF583KIK 6720633 ENCODE Processing Pipeline 10cdbd57a15feec19ece4595e01778ce https://www.encodeproject.org/files/ENCFF458LZF/@@download/ENCFF458LZF.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF083CKI bigBed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF438FDS 12674492 ENCODE Processing Pipeline a04007102bd010166c95f82f5cf232f5 https://www.encodeproject.org/files/ENCFF083CKI/@@download/ENCFF083CKI.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF076AFD bed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF583KIK, ENCFF748DXR 7178942 ENCODE Processing Pipeline 0bbe40afbd2e12ab29dde1e5eb0d8e8b https://www.encodeproject.org/files/ENCFF076AFD/@@download/ENCFF076AFD.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF807EDA bigBed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF458LZF 13116169 ENCODE Processing Pipeline 67240ce379d73cf57c4fb3dbe2d0811a https://www.encodeproject.org/files/ENCFF807EDA/@@download/ENCFF807EDA.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF901RSE bigBed narrowPeak peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF076AFD 12695709 ENCODE Processing Pipeline 1f7687dd4cc2eb64a57704ce72b20c35 https://www.encodeproject.org/files/ENCFF901RSE/@@download/ENCFF901RSE.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF185VZD bigBed narrowPeak conservative idr thresholded peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF362XYI 718886 ENCODE Processing Pipeline 61b75700dca518b1603261ebd42e1b40 https://www.encodeproject.org/files/ENCFF185VZD/@@download/ENCFF185VZD.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF362XYI bed narrowPeak conservative idr thresholded peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF076AFD, ENCFF438FDS, ENCFF458LZF 353371 ENCODE Processing Pipeline 4ee682a4abf88c5832ef855bbdac2d10 https://www.encodeproject.org/files/ENCFF362XYI/@@download/ENCFF362XYI.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF953INM bed narrowPeak optimal idr thresholded peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF076AFD, ENCFF438FDS, ENCFF458LZF 356935 ENCODE Processing Pipeline e8cb5d27a11901e804834fc3efb65c1a https://www.encodeproject.org/files/ENCFF953INM/@@download/ENCFF953INM.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF448REB bigBed narrowPeak optimal idr thresholded peaks ENCSR441KFW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF953INM 726868 ENCODE Processing Pipeline 9efeb4d63f06753dd90ca4a6a1d43b8a https://www.encodeproject.org/files/ENCFF448REB/@@download/ENCFF448REB.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF633ZLO fastq reads ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1372902736 Richard Myers, HAIB ff3e860f685ef460285e4e82d9fddfc0 SRA:SRR5339286 https://www.encodeproject.org/files/ENCFF633ZLO/@@download/ENCFF633ZLO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF762ILJ fastq reads ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1423505960 Richard Myers, HAIB 7bdd6af8f70b027a270c92674c928680 SRA:SRR5339287 https://www.encodeproject.org/files/ENCFF762ILJ/@@download/ENCFF762ILJ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF496MEG bam unfiltered alignments ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF633ZLO, ENCFF643CGH 1608002874 ENCODE Processing Pipeline a550ace3d9d8f5d1630da310ca8d7bb2 https://www.encodeproject.org/files/ENCFF496MEG/@@download/ENCFF496MEG.bam GRCh38 released antibody characterized with exemption ENCFF251FIG bam unfiltered alignments ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF633ZLO, ENCFF807MUK 1605189361 ENCODE Processing Pipeline 408fdd845ea967cf4fc459a264e54707 https://www.encodeproject.org/files/ENCFF251FIG/@@download/ENCFF251FIG.bam hg19 released antibody characterized with exemption ENCFF723RGN bam unfiltered alignments ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF762ILJ 1682846787 ENCODE Processing Pipeline 4a79cb67d3283fdd5cc0ce77641d32ce https://www.encodeproject.org/files/ENCFF723RGN/@@download/ENCFF723RGN.bam GRCh38 released antibody characterized with exemption ENCFF407QSA bam alignments ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF633ZLO, ENCFF643CGH 1184353880 ENCODE Processing Pipeline 5ab92f23082050da540092dca0932b5b https://www.encodeproject.org/files/ENCFF407QSA/@@download/ENCFF407QSA.bam GRCh38 released antibody characterized with exemption ENCFF266IKT bam alignments ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF762ILJ 1256392548 ENCODE Processing Pipeline 5389579078fc5ea90eadc1c5c9a0d146 https://www.encodeproject.org/files/ENCFF266IKT/@@download/ENCFF266IKT.bam GRCh38 released antibody characterized with exemption ENCFF521ZCY bam unfiltered alignments ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF762ILJ, ENCFF807MUK 1679110924 ENCODE Processing Pipeline efb37dffc689cc4e43608ca9867aed4f https://www.encodeproject.org/files/ENCFF521ZCY/@@download/ENCFF521ZCY.bam hg19 released antibody characterized with exemption ENCFF249WJP bam alignments ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF633ZLO, ENCFF807MUK 1184081598 ENCODE Processing Pipeline 40a07dae2cc02619be8411b2c871947a https://www.encodeproject.org/files/ENCFF249WJP/@@download/ENCFF249WJP.bam hg19 released antibody characterized with exemption ENCFF126EYL bam alignments ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF762ILJ, ENCFF807MUK 1255869353 ENCODE Processing Pipeline f342f645530e8d0121df4d7ccb8cdb6d https://www.encodeproject.org/files/ENCFF126EYL/@@download/ENCFF126EYL.bam hg19 released antibody characterized with exemption ENCFF272DSB bigWig signal p-value ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF266IKT 463357100 ENCODE Processing Pipeline fccd25d5e33183bc3dc7437eb4283f22 https://www.encodeproject.org/files/ENCFF272DSB/@@download/ENCFF272DSB.bigWig GRCh38 released antibody characterized with exemption ENCFF164TLX bigWig signal p-value ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF407QSA 474661523 ENCODE Processing Pipeline bef0a0cee9be43c7bb9e8ffdd189813c https://www.encodeproject.org/files/ENCFF164TLX/@@download/ENCFF164TLX.bigWig GRCh38 released antibody characterized with exemption ENCFF221YOP bigWig signal p-value ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF266IKT, ENCFF407QSA 656833160 ENCODE Processing Pipeline b57b7760aaa3b259a322cc72590b73ba https://www.encodeproject.org/files/ENCFF221YOP/@@download/ENCFF221YOP.bigWig GRCh38 released antibody characterized with exemption ENCFF385BDJ bigWig fold change over control ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF266IKT 459357853 ENCODE Processing Pipeline 9142f68992ef21f75d21c0dc2a340ab3 https://www.encodeproject.org/files/ENCFF385BDJ/@@download/ENCFF385BDJ.bigWig GRCh38 released antibody characterized with exemption ENCFF023MRH bigWig fold change over control ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF407QSA 433101100 ENCODE Processing Pipeline 11dc7660794f8548b96f3d588a0cbfed https://www.encodeproject.org/files/ENCFF023MRH/@@download/ENCFF023MRH.bigWig GRCh38 released antibody characterized with exemption ENCFF215RSZ bigWig fold change over control ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF266IKT, ENCFF407QSA 749486297 ENCODE Processing Pipeline 6878345a8f0b2eb5cd16c13001a94f91 https://www.encodeproject.org/files/ENCFF215RSZ/@@download/ENCFF215RSZ.bigWig GRCh38 released antibody characterized with exemption ENCFF321NAD bed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF266IKT 6095346 ENCODE Processing Pipeline 319bf735118491d35fb538cb9b64c674 https://www.encodeproject.org/files/ENCFF321NAD/@@download/ENCFF321NAD.bed.gz GRCh38 released antibody characterized with exemption ENCFF713HVN bigBed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF321NAD 13079160 ENCODE Processing Pipeline 1d79d94662ad26f53d262c5e044485e5 https://www.encodeproject.org/files/ENCFF713HVN/@@download/ENCFF713HVN.bigBed GRCh38 released antibody characterized with exemption ENCFF831YRJ bed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF407QSA 6492222 ENCODE Processing Pipeline 70c78e6f455c40712e0e19bddcb27a5e https://www.encodeproject.org/files/ENCFF831YRJ/@@download/ENCFF831YRJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF259LBW bed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF266IKT, ENCFF407QSA 6911531 ENCODE Processing Pipeline aa7df2693b7a815786a883ac3a9bb482 https://www.encodeproject.org/files/ENCFF259LBW/@@download/ENCFF259LBW.bed.gz GRCh38 released antibody characterized with exemption ENCFF407YHS bed narrowPeak conservative idr thresholded peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF259LBW, ENCFF321NAD, ENCFF419RSJ, ENCFF831YRJ 335356 ENCODE Processing Pipeline 65a454abefd3f7d5c4ef89070d746827 https://www.encodeproject.org/files/ENCFF407YHS/@@download/ENCFF407YHS.bed.gz GRCh38 released antibody characterized with exemption ENCFF129VTP bigBed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF831YRJ 12856680 ENCODE Processing Pipeline 8d488eb250e9c3acddf11ef5fd5d9cf4 https://www.encodeproject.org/files/ENCFF129VTP/@@download/ENCFF129VTP.bigBed GRCh38 released antibody characterized with exemption ENCFF506BOO bigBed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF259LBW 12830338 ENCODE Processing Pipeline 62c7eed8b335bb2d1e5f33a7aae5ad6f https://www.encodeproject.org/files/ENCFF506BOO/@@download/ENCFF506BOO.bigBed GRCh38 released antibody characterized with exemption ENCFF980OTF bed narrowPeak optimal idr thresholded peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF259LBW, ENCFF321NAD, ENCFF419RSJ, ENCFF831YRJ 336871 ENCODE Processing Pipeline f11f801fec8a4dffdffdcaa6a6d53e52 https://www.encodeproject.org/files/ENCFF980OTF/@@download/ENCFF980OTF.bed.gz GRCh38 released antibody characterized with exemption ENCFF060MHT bigBed narrowPeak conservative idr thresholded peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF407YHS 668476 ENCODE Processing Pipeline 68146e44fc8ce2f7a918f2f073c60b04 https://www.encodeproject.org/files/ENCFF060MHT/@@download/ENCFF060MHT.bigBed GRCh38 released antibody characterized with exemption ENCFF785ZAY bigBed narrowPeak optimal idr thresholded peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF980OTF 669979 ENCODE Processing Pipeline c98e5b4e99d06533e62f90c912c99094 https://www.encodeproject.org/files/ENCFF785ZAY/@@download/ENCFF785ZAY.bigBed GRCh38 released antibody characterized with exemption ENCFF382YWX bigWig signal p-value ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126EYL, ENCFF203ABR 1354009238 ENCODE Processing Pipeline 0d46d1aa81041785e6eac4a0033f9945 https://www.encodeproject.org/files/ENCFF382YWX/@@download/ENCFF382YWX.bigWig hg19 released antibody characterized with exemption ENCFF384STM bigWig signal p-value ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF249WJP 1127280625 ENCODE Processing Pipeline 3c6db9a00a1f965825532babced3bd39 https://www.encodeproject.org/files/ENCFF384STM/@@download/ENCFF384STM.bigWig hg19 released antibody characterized with exemption ENCFF285ARC bigWig signal p-value ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126EYL, ENCFF203ABR, ENCFF249WJP 1460759481 ENCODE Processing Pipeline 6488817da3246366867bfb892fe36018 https://www.encodeproject.org/files/ENCFF285ARC/@@download/ENCFF285ARC.bigWig hg19 released antibody characterized with exemption ENCFF111HZX bigWig fold change over control ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126EYL, ENCFF203ABR 878027772 ENCODE Processing Pipeline 610535ce177703a8aafec5b13434d946 https://www.encodeproject.org/files/ENCFF111HZX/@@download/ENCFF111HZX.bigWig hg19 released antibody characterized with exemption ENCFF399MNP bigWig fold change over control ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF249WJP 811746803 ENCODE Processing Pipeline 80715a9a6ae168940b634db6a76e15c8 https://www.encodeproject.org/files/ENCFF399MNP/@@download/ENCFF399MNP.bigWig hg19 released antibody characterized with exemption ENCFF017BUZ bigWig fold change over control ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126EYL, ENCFF203ABR, ENCFF249WJP 1370352676 ENCODE Processing Pipeline c28ba8329910bd11a53adfb5a937e384 https://www.encodeproject.org/files/ENCFF017BUZ/@@download/ENCFF017BUZ.bigWig hg19 released antibody characterized with exemption ENCFF360QSJ bed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126EYL, ENCFF203ABR 6751382 ENCODE Processing Pipeline f02e9930599d8201b2a66cc5243ca53f https://www.encodeproject.org/files/ENCFF360QSJ/@@download/ENCFF360QSJ.bed.gz hg19 released antibody characterized with exemption ENCFF876KIS bigBed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF215GXV 12713755 ENCODE Processing Pipeline ec75b4ec034d3466d6b57549f2da94fd https://www.encodeproject.org/files/ENCFF876KIS/@@download/ENCFF876KIS.bigBed hg19 released antibody characterized with exemption ENCFF796AOK bigBed narrowPeak optimal idr thresholded peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF099CBG 680709 ENCODE Processing Pipeline 0f4a624fde0f730c17f5a9175e0af012 https://www.encodeproject.org/files/ENCFF796AOK/@@download/ENCFF796AOK.bigBed hg19 released antibody characterized with exemption ENCFF215GXV bed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF249WJP 6867836 ENCODE Processing Pipeline 5af186408e02febbaefb4e4ffed8e65a https://www.encodeproject.org/files/ENCFF215GXV/@@download/ENCFF215GXV.bed.gz hg19 released antibody characterized with exemption ENCFF670VGU bed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126EYL, ENCFF203ABR, ENCFF249WJP 7184931 ENCODE Processing Pipeline c1fd8253d427ece288fefea1077aa249 https://www.encodeproject.org/files/ENCFF670VGU/@@download/ENCFF670VGU.bed.gz hg19 released antibody characterized with exemption ENCFF665YEH bigBed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF360QSJ 13040891 ENCODE Processing Pipeline 3c427324d338df068c885b4398bc460f https://www.encodeproject.org/files/ENCFF665YEH/@@download/ENCFF665YEH.bigBed hg19 released antibody characterized with exemption ENCFF099CBG bed narrowPeak optimal idr thresholded peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF215GXV, ENCFF360QSJ, ENCFF670VGU 323418 ENCODE Processing Pipeline 53566a9b3029223914026dab1563b320 https://www.encodeproject.org/files/ENCFF099CBG/@@download/ENCFF099CBG.bed.gz hg19 released antibody characterized with exemption ENCFF616ORV bigBed narrowPeak peaks ENCSR757EKM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KLF6-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF670VGU 12821091 ENCODE Processing Pipeline de08ee583c10a1e7fb406125d929bd01 https://www.encodeproject.org/files/ENCFF616ORV/@@download/ENCFF616ORV.bigBed hg19 released antibody characterized with exemption ENCFF801MAM fastq reads ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 937199330 Richard Myers, HAIB ea9b76796419996d042c381243df7d71 SRA:SRR5331164 https://www.encodeproject.org/files/ENCFF801MAM/@@download/ENCFF801MAM.fastq.gz HiSeq 2000 /files/ENCFF105CNG/ released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF822AJG fastq reads ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1119483973 Richard Myers, HAIB e8fd5620a9a497ae2d1e1ac687d3a98e SRA:SRR5331163 https://www.encodeproject.org/files/ENCFF822AJG/@@download/ENCFF822AJG.fastq.gz HiSeq 2000 /files/ENCFF105CNG/ released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF051OAV bam alignments ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF807MUK, ENCFF822AJG 857239659 ENCODE Processing Pipeline 331ec482b6a825598d1982a0834c214c https://www.encodeproject.org/files/ENCFF051OAV/@@download/ENCFF051OAV.bam hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF528KWW bam alignments ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF801MAM, ENCFF807MUK 725800333 ENCODE Processing Pipeline a5eb43feed3a804da1ffa442f2913dfe https://www.encodeproject.org/files/ENCFF528KWW/@@download/ENCFF528KWW.bam hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF765AVR bed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF051OAV, ENCFF231YLU 5527136 ENCODE Processing Pipeline eb8d4b0505df6f34667b376971e36816 https://www.encodeproject.org/files/ENCFF765AVR/@@download/ENCFF765AVR.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF925KRY bed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051OAV, ENCFF231YLU, ENCFF528KWW 6062921 ENCODE Processing Pipeline 03f3426a143628572d27640cbc23176a https://www.encodeproject.org/files/ENCFF925KRY/@@download/ENCFF925KRY.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF537YPR bigWig signal p-value ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF051OAV, ENCFF231YLU 398510841 ENCODE Processing Pipeline b74480d557d19e96f96b11ca702d5d3c https://www.encodeproject.org/files/ENCFF537YPR/@@download/ENCFF537YPR.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF419ALT bigWig signal p-value ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051OAV, ENCFF231YLU, ENCFF528KWW 495163588 ENCODE Processing Pipeline 6ce78272a801d8e4342705db0fff9417 https://www.encodeproject.org/files/ENCFF419ALT/@@download/ENCFF419ALT.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF601BIM bigWig signal p-value ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF231YLU, ENCFF528KWW 382491233 ENCODE Processing Pipeline 0f7e70a2817cc758c4f936a2eb3e098e https://www.encodeproject.org/files/ENCFF601BIM/@@download/ENCFF601BIM.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF983EBS bigWig fold change over control ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF051OAV, ENCFF231YLU 374007626 ENCODE Processing Pipeline 481205800cf7ef41abca6b6ca4f849d9 https://www.encodeproject.org/files/ENCFF983EBS/@@download/ENCFF983EBS.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF332OXV bed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF231YLU, ENCFF528KWW 5157282 ENCODE Processing Pipeline 2cfa4c617c8654ce52b9d9bea96e6149 https://www.encodeproject.org/files/ENCFF332OXV/@@download/ENCFF332OXV.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF879CZA bigBed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF332OXV 10833077 ENCODE Processing Pipeline f0d8097f7b24a26157cbea563dc69d57 https://www.encodeproject.org/files/ENCFF879CZA/@@download/ENCFF879CZA.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF945ZRJ bigBed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF925KRY 11506510 ENCODE Processing Pipeline 60aab806f7e93cb83ea755bab7e915be https://www.encodeproject.org/files/ENCFF945ZRJ/@@download/ENCFF945ZRJ.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF241KRI bed narrowPeak conservative idr thresholded peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF332OXV, ENCFF765AVR, ENCFF925KRY 1022373 ENCODE Processing Pipeline 7e343e4b08b2d3a09a40c8715bf55d9f https://www.encodeproject.org/files/ENCFF241KRI/@@download/ENCFF241KRI.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF379VSH bigBed narrowPeak optimal idr thresholded peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF734ALE 1770895 ENCODE Processing Pipeline 3c1ba17529f51caa73eaa6fa6f311ab9 https://www.encodeproject.org/files/ENCFF379VSH/@@download/ENCFF379VSH.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF909BKK bigWig fold change over control ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF231YLU, ENCFF528KWW 322974276 ENCODE Processing Pipeline 9cad687a748e40f46cd30835eddf1c16 https://www.encodeproject.org/files/ENCFF909BKK/@@download/ENCFF909BKK.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF120BII bigWig fold change over control ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051OAV, ENCFF231YLU, ENCFF528KWW 583373638 ENCODE Processing Pipeline 2e15d04d6c1721d36c709d0311ab638d https://www.encodeproject.org/files/ENCFF120BII/@@download/ENCFF120BII.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF399XCG bigBed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF765AVR 11231798 ENCODE Processing Pipeline c51cc55acf1d13ded1e281318622a9ef https://www.encodeproject.org/files/ENCFF399XCG/@@download/ENCFF399XCG.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF732GXO bigBed narrowPeak conservative idr thresholded peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF241KRI 1709737 ENCODE Processing Pipeline 32b5228455f803ba4ec4cf388965cd6c https://www.encodeproject.org/files/ENCFF732GXO/@@download/ENCFF732GXO.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF734ALE bed narrowPeak optimal idr thresholded peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF332OXV, ENCFF765AVR, ENCFF925KRY 1069944 ENCODE Processing Pipeline a693f52a70b13cbf3379c94bebd70962 https://www.encodeproject.org/files/ENCFF734ALE/@@download/ENCFF734ALE.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF970PZO bam unfiltered alignments ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF822AJG 1140435824 ENCODE Processing Pipeline 6d75c6740bbec648965b3da0be02574c https://www.encodeproject.org/files/ENCFF970PZO/@@download/ENCFF970PZO.bam GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF280INZ bam unfiltered alignments ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF643CGH, ENCFF801MAM 958636583 ENCODE Processing Pipeline 5565ff2e1762a9c5e487988301b60423 https://www.encodeproject.org/files/ENCFF280INZ/@@download/ENCFF280INZ.bam GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF200WCM bam alignments ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF643CGH, ENCFF801MAM 725614179 ENCODE Processing Pipeline f89c794a54e1a7a15ec41026100e000b https://www.encodeproject.org/files/ENCFF200WCM/@@download/ENCFF200WCM.bam GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF346ENH bam alignments ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF822AJG 857056875 ENCODE Processing Pipeline dd071e72914f4808af8da625417ee0b6 https://www.encodeproject.org/files/ENCFF346ENH/@@download/ENCFF346ENH.bam GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF013ZPN bigWig signal p-value ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF346ENH, ENCFF750GYK 424295983 ENCODE Processing Pipeline 35f0154480d4651109b0ff94b8dc6136 https://www.encodeproject.org/files/ENCFF013ZPN/@@download/ENCFF013ZPN.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF414LLA bigWig signal p-value ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF200WCM, ENCFF346ENH, ENCFF750GYK 491799386 ENCODE Processing Pipeline c902a0ba101bfc46d4232a47437dd169 https://www.encodeproject.org/files/ENCFF414LLA/@@download/ENCFF414LLA.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF361QVH bigWig fold change over control ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF346ENH, ENCFF750GYK 374002123 ENCODE Processing Pipeline dbabf8c85bc2c9a62fe67a60664602fa https://www.encodeproject.org/files/ENCFF361QVH/@@download/ENCFF361QVH.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF289DIW bigWig signal p-value ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF200WCM, ENCFF750GYK 442177392 ENCODE Processing Pipeline b7c4f19e5f8eb48a9500815b3630f85b https://www.encodeproject.org/files/ENCFF289DIW/@@download/ENCFF289DIW.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF244LQL bigWig fold change over control ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF200WCM, ENCFF750GYK 322751105 ENCODE Processing Pipeline e7d0115d432e1d699ff9b7cb4eb5b2d9 https://www.encodeproject.org/files/ENCFF244LQL/@@download/ENCFF244LQL.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF793MTS bed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF200WCM, ENCFF346ENH, ENCFF750GYK 5926974 ENCODE Processing Pipeline af1fa3b957b572a1e3569a59d59bb2e7 https://www.encodeproject.org/files/ENCFF793MTS/@@download/ENCFF793MTS.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF685DYE bed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF346ENH, ENCFF750GYK 5393716 ENCODE Processing Pipeline 1214e25afcfa1548760c362a2c84785b https://www.encodeproject.org/files/ENCFF685DYE/@@download/ENCFF685DYE.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF771KZZ bigWig fold change over control ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF200WCM, ENCFF346ENH, ENCFF750GYK 580244448 ENCODE Processing Pipeline 3255cd994437ea5115f1aba6ab0d61fe https://www.encodeproject.org/files/ENCFF771KZZ/@@download/ENCFF771KZZ.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF196OKL bed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF200WCM, ENCFF750GYK 5046434 ENCODE Processing Pipeline b06b2bd2c9b295548138b0c253e869fb https://www.encodeproject.org/files/ENCFF196OKL/@@download/ENCFF196OKL.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF853BVN bigBed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF685DYE 11106068 ENCODE Processing Pipeline 88d23f4924c8242984af077d1237d843 https://www.encodeproject.org/files/ENCFF853BVN/@@download/ENCFF853BVN.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF739AMM bigBed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF793MTS 11451475 ENCODE Processing Pipeline d48ea36fa511d4eeb5729a2f47c446a7 https://www.encodeproject.org/files/ENCFF739AMM/@@download/ENCFF739AMM.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF409PJH bigBed narrowPeak peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF196OKL 10738257 ENCODE Processing Pipeline 5684972289ddb58460964980d7627d12 https://www.encodeproject.org/files/ENCFF409PJH/@@download/ENCFF409PJH.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF148OLB bigBed narrowPeak conservative idr thresholded peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF851IPG 1713952 ENCODE Processing Pipeline 13732d3c578fe16db94d65796c24ada4 https://www.encodeproject.org/files/ENCFF148OLB/@@download/ENCFF148OLB.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF851IPG bed narrowPeak conservative idr thresholded peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF196OKL, ENCFF419RSJ, ENCFF685DYE, ENCFF793MTS 1023346 ENCODE Processing Pipeline 153deac36ee1393d6278d753ac7abea3 https://www.encodeproject.org/files/ENCFF851IPG/@@download/ENCFF851IPG.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF247IVC bigBed narrowPeak optimal idr thresholded peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF330VPL 1779448 ENCODE Processing Pipeline e5fd20943f7da8cb4c03050a88d7402e https://www.encodeproject.org/files/ENCFF247IVC/@@download/ENCFF247IVC.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF330VPL bed narrowPeak optimal idr thresholded peaks ENCSR054FKH ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-RAD21-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF196OKL, ENCFF419RSJ, ENCFF685DYE, ENCFF793MTS 1074288 ENCODE Processing Pipeline 6d45b623065fdc36d56bf162cec6b57c https://www.encodeproject.org/files/ENCFF330VPL/@@download/ENCFF330VPL.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF000OMT bam alignments ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000ONI 782448650 Richard Myers, HAIB 68683ab573d8607f0ccebbd82936ebbe https://www.encodeproject.org/files/ENCFF000OMT/@@download/ENCFF000OMT.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking ENCFF000OMU bigBed broadPeak peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UAW 103474 Richard Myers, HAIB e0bda6c1fb61810cb71aebf710c0568d https://www.encodeproject.org/files/ENCFF000OMU/@@download/ENCFF000OMU.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking ENCFF000OMX bigWig raw signal ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 1 4032813 Richard Myers, HAIB 0be84f5b8e0aca6dc8305e9af7b9fdc3 https://www.encodeproject.org/files/ENCFF000OMX/@@download/ENCFF000OMX.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from ENCFF000ONI fastq reads ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 903296680 Richard Myers, HAIB 97f98ddad6026fb873e305d5e253319e https://www.encodeproject.org/files/ENCFF000ONI/@@download/ENCFF000ONI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OSP/ released low read length, low read depth, mild to moderate bottlenecking ENCFF001UAW bed broadPeak peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 1 35278 Richard Myers, HAIB 0b2c0d15c48eb9a3829f912c0634efd4 https://www.encodeproject.org/files/ENCFF001UAW/@@download/ENCFF001UAW.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from ENCFF002CIT bed narrowPeak optimal idr thresholded peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 52410 ENCODE Consortium Analysis Working Group 2c0c565a76897f3160d301f7ec998e47 https://www.encodeproject.org/files/ENCFF002CIT/@@download/ENCFF002CIT.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from ENCFF655RML bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE ENCFF002CIT 131499 ENCODE Consortium 3c734ca1a1160d237e4161deba3e5a17 https://www.encodeproject.org/files/ENCFF655RML/@@download/ENCFF655RML.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking ENCFF457BYM bam unfiltered alignments ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ONI, ENCFF807MUK 1135700200 ENCODE Processing Pipeline dc764a351974b0ba5ca8e2c1190d05ba https://www.encodeproject.org/files/ENCFF457BYM/@@download/ENCFF457BYM.bam hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF756YAE bam alignments ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ONI, ENCFF807MUK 570896640 ENCODE Processing Pipeline bf202ac988a85c6ab616041a1cf8d2a7 https://www.encodeproject.org/files/ENCFF756YAE/@@download/ENCFF756YAE.bam hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF854FYP bam unfiltered alignments ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ONI, ENCFF643CGH 1139774091 ENCODE Processing Pipeline 48d3060d9414f350a3351b5da8b0f30b https://www.encodeproject.org/files/ENCFF854FYP/@@download/ENCFF854FYP.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF916PMP bam alignments ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000ONI, ENCFF643CGH 570621284 ENCODE Processing Pipeline 784a8b02de0525d9364a135b10fbcc73 https://www.encodeproject.org/files/ENCFF916PMP/@@download/ENCFF916PMP.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF734XLT bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF533KIC 72615 ENCODE Processing Pipeline ed31d6afdf8bade405c4da7b36b03922 https://www.encodeproject.org/files/ENCFF734XLT/@@download/ENCFF734XLT.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF203IVF bigWig fold change over control ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF916PMP, ENCFF948LKH 272292917 ENCODE Processing Pipeline f952c8cb257eea3c32f59419cae8e955 https://www.encodeproject.org/files/ENCFF203IVF/@@download/ENCFF203IVF.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF878KED bigWig fold change over control ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF756YAE 271873250 ENCODE Processing Pipeline 360479d2d7f6595cd33f5d7fa9fd1206 https://www.encodeproject.org/files/ENCFF878KED/@@download/ENCFF878KED.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF702WPJ bed narrowPeak peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF756YAE 3568604 ENCODE Processing Pipeline 71929a7a0a5c589ffb5ea443f2a8db03 https://www.encodeproject.org/files/ENCFF702WPJ/@@download/ENCFF702WPJ.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF555LKT bigBed narrowPeak peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF702WPJ 7968183 ENCODE Processing Pipeline 7bfaf448a0d1157d913f1494ad082099 https://www.encodeproject.org/files/ENCFF555LKT/@@download/ENCFF555LKT.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF175OER bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF001TDO, ENCFF702WPJ 20232 ENCODE Processing Pipeline 754ac9672f59f5478f243937366b1ccf https://www.encodeproject.org/files/ENCFF175OER/@@download/ENCFF175OER.bed.gz hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF969DLI bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF175OER 72541 ENCODE Processing Pipeline ccef59821875bd85cfef4b381cbc6bfb https://www.encodeproject.org/files/ENCFF969DLI/@@download/ENCFF969DLI.bigBed hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF533KIC bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF419RSJ, ENCFF948WCH 20375 ENCODE Processing Pipeline f58afb82becf0cefc3f1fb31e45636e8 https://www.encodeproject.org/files/ENCFF533KIC/@@download/ENCFF533KIC.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF776UZH bigWig signal p-value ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF356DXM, ENCFF756YAE 487058151 ENCODE Processing Pipeline 4dea7d9bf2a0c3a7e4b5f9ec59c90447 https://www.encodeproject.org/files/ENCFF776UZH/@@download/ENCFF776UZH.bigWig hg19 released low read length, low read depth, mild to moderate bottlenecking ENCFF644FWA bigWig signal p-value ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF916PMP, ENCFF948LKH 482796645 ENCODE Processing Pipeline c3658fcbdbcc1b5e2b045c41dc58099c https://www.encodeproject.org/files/ENCFF644FWA/@@download/ENCFF644FWA.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF948WCH bed narrowPeak peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF916PMP, ENCFF948LKH 3565086 ENCODE Processing Pipeline 3e6c618a1f9248359c8e02b31370e4b7 https://www.encodeproject.org/files/ENCFF948WCH/@@download/ENCFF948WCH.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF029DMU bigBed narrowPeak peaks ENCSR000BIP ChIP-seq EFO:0003042 H1-hESC stem cell embryonic male unknown Homo sapiens BCL11A-human ENCAB000AEE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF948WCH 7954544 ENCODE Processing Pipeline a85520188ccc077977d346592c92480f https://www.encodeproject.org/files/ENCFF029DMU/@@download/ENCFF029DMU.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking ENCFF000NCV bam alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000NDF 841119021 Richard Myers, HAIB 64c8e4cae68a8392a2b3ef21b104ce79 https://www.encodeproject.org/files/ENCFF000NCV/@@download/ENCFF000NCV.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NCW bigBed broadPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001TSV 383562 Richard Myers, HAIB e082d2040e07d5470edbe3fdb77ecab3 https://www.encodeproject.org/files/ENCFF000NCW/@@download/ENCFF000NCW.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NCX bigBed broadPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001TSW 600370 Richard Myers, HAIB e1cbcf8daab98a3063b64ef30a24ed2e https://www.encodeproject.org/files/ENCFF000NCX/@@download/ENCFF000NCX.bigBed hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NCY bam alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000NDH 1163407765 Richard Myers, HAIB 7e20947c9f615df7e4258a5e55f62bf6 https://www.encodeproject.org/files/ENCFF000NCY/@@download/ENCFF000NCY.bam hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NCZ bigWig raw signal ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 12452250 Richard Myers, HAIB 8433ddbb571bbcc0a8bb29e8691479cd https://www.encodeproject.org/files/ENCFF000NCZ/@@download/ENCFF000NCZ.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000NDB bigWig raw signal ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 24240076 Richard Myers, HAIB 25e1c5aae7c33b1e0b513e9ebb60adf4 https://www.encodeproject.org/files/ENCFF000NDB/@@download/ENCFF000NDB.bigWig hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF000NDF fastq reads ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 36 single-ended 829627509 Richard Myers, HAIB ed3261c5637d337faa6dfa42d5f7a34e https://www.encodeproject.org/files/ENCFF000NDF/@@download/ENCFF000NDF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGB/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NDH fastq reads ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 36 single-ended 1264349622 Richard Myers, HAIB f774484230933453c063f2b1667dda13 https://www.encodeproject.org/files/ENCFF000NDH/@@download/ENCFF000NDH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGB/ released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF001TSV bed broadPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 1 197264 Richard Myers, HAIB 5e9f089b801b13628a98b8623c9da52b https://www.encodeproject.org/files/ENCFF001TSV/@@download/ENCFF001TSV.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF001TSW bed broadPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 1 390866 Richard Myers, HAIB 7a127c0eee155510e08f0121f884804d https://www.encodeproject.org/files/ENCFF001TSW/@@download/ENCFF001TSW.bed.gz hg19 archived mild to moderate bottlenecking, low read length, low read depth, moderate library complexity missing derived_from, biological replicates with identical biosample ENCFF372XIB bam unfiltered alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000NDH, ENCFF643CGH 1495642493 ENCODE Processing Pipeline 5e064d2eb88f80aef19b3565386ca1f4 https://www.encodeproject.org/files/ENCFF372XIB/@@download/ENCFF372XIB.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF455WFJ bam unfiltered alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000NDF, ENCFF643CGH 1020332597 ENCODE Processing Pipeline 95a7d1d720d7545b9e781e630b42da73 https://www.encodeproject.org/files/ENCFF455WFJ/@@download/ENCFF455WFJ.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF503HYC bam alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000NDH, ENCFF643CGH 748536102 ENCODE Processing Pipeline 58ab6cfeb44d76cf87e86b8030588256 https://www.encodeproject.org/files/ENCFF503HYC/@@download/ENCFF503HYC.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF344VWC bam unfiltered alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000NDF, ENCFF807MUK 1015999760 ENCODE Processing Pipeline 286573d6c9dcb4862a647aae8c2b8415 https://www.encodeproject.org/files/ENCFF344VWC/@@download/ENCFF344VWC.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF242TUC bam alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000NDF, ENCFF807MUK 496667094 ENCODE Processing Pipeline 9096cdfffd8298b020b057a294dcef9b https://www.encodeproject.org/files/ENCFF242TUC/@@download/ENCFF242TUC.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF599KFZ bam alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000NDF, ENCFF643CGH 496412119 ENCODE Processing Pipeline a92e5779e05d22d7fcd65ed7bca0f253 https://www.encodeproject.org/files/ENCFF599KFZ/@@download/ENCFF599KFZ.bam GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF692HNU bam unfiltered alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000NDH, ENCFF807MUK 1493116135 ENCODE Processing Pipeline aef0bfe0bccd6d6cf7a9a22dc82c28f7 https://www.encodeproject.org/files/ENCFF692HNU/@@download/ENCFF692HNU.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF130JET bam alignments ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000NDH, ENCFF807MUK 748921577 ENCODE Processing Pipeline c3a1f4b559facc9249699b4c484a11f5 https://www.encodeproject.org/files/ENCFF130JET/@@download/ENCFF130JET.bam hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF713ANY bigWig fold change over control ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF242TUC, ENCFF540RWT 261126995 ENCODE Processing Pipeline 01ac11cba78b47aebea3f13a7e3e2094 https://www.encodeproject.org/files/ENCFF713ANY/@@download/ENCFF713ANY.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF645SYX bed narrowPeak conservative idr thresholded peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF154EAD, ENCFF740MCA, ENCFF804HAX 276594 ENCODE Processing Pipeline 431356507055382e9190445a8fdeb576 https://www.encodeproject.org/files/ENCFF645SYX/@@download/ENCFF645SYX.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF527UIE bigWig fold change over control ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF130JET, ENCFF540RWT 328997591 ENCODE Processing Pipeline ff367062c0e98853d0f3b0b9db70645a https://www.encodeproject.org/files/ENCFF527UIE/@@download/ENCFF527UIE.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF804HAX bed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF242TUC, ENCFF540RWT 4277251 ENCODE Processing Pipeline 82d4f0ca4fbc2c9406b10f5587dc113f https://www.encodeproject.org/files/ENCFF804HAX/@@download/ENCFF804HAX.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF154EAD bed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF130JET, ENCFF540RWT 5164288 ENCODE Processing Pipeline 3ece3de3b2b08e7958c8b5e6a373202f https://www.encodeproject.org/files/ENCFF154EAD/@@download/ENCFF154EAD.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF753ZFS bigBed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF154EAD 10827030 ENCODE Processing Pipeline a29eeeb55a1f14c0923860f4bfdcdf3b https://www.encodeproject.org/files/ENCFF753ZFS/@@download/ENCFF753ZFS.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF264QQV bigBed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF740MCA 13137186 ENCODE Processing Pipeline e8f959e6d850fcef43c948e35b4492de https://www.encodeproject.org/files/ENCFF264QQV/@@download/ENCFF264QQV.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF742DPI bigWig signal p-value ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF130JET, ENCFF242TUC, ENCFF540RWT 505624622 ENCODE Processing Pipeline 91ae87019face97bcdd8a5f5be0dcec2 https://www.encodeproject.org/files/ENCFF742DPI/@@download/ENCFF742DPI.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF331OMY bigWig fold change over control ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF130JET, ENCFF242TUC, ENCFF540RWT 524438736 ENCODE Processing Pipeline 2beef470e9986620da32da19520c477f https://www.encodeproject.org/files/ENCFF331OMY/@@download/ENCFF331OMY.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF740MCA bed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF130JET, ENCFF242TUC, ENCFF540RWT 5564289 ENCODE Processing Pipeline d974bb382c2b8f02115a5c8b15bc6198 https://www.encodeproject.org/files/ENCFF740MCA/@@download/ENCFF740MCA.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF506CHU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF645SYX 519827 ENCODE Processing Pipeline 7e09d01115e9cfbc5de9da3b84177a4f https://www.encodeproject.org/files/ENCFF506CHU/@@download/ENCFF506CHU.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF415CFG bigWig signal p-value ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF242TUC, ENCFF540RWT 446779117 ENCODE Processing Pipeline d3815ec513910766f4665be079e6515d https://www.encodeproject.org/files/ENCFF415CFG/@@download/ENCFF415CFG.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF550JQZ bigWig signal p-value ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF130JET, ENCFF540RWT 506920639 ENCODE Processing Pipeline 123858324a619e8bd61b2206e23efe0e https://www.encodeproject.org/files/ENCFF550JQZ/@@download/ENCFF550JQZ.bigWig hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF668MVE bigBed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF804HAX 10328129 ENCODE Processing Pipeline 7d7a25df62dc725fad15d137bde21d91 https://www.encodeproject.org/files/ENCFF668MVE/@@download/ENCFF668MVE.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF010RXQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF499OUD 633804 ENCODE Processing Pipeline b7b8f9f0bdb016ec2b5b91369bd47b54 https://www.encodeproject.org/files/ENCFF010RXQ/@@download/ENCFF010RXQ.bigBed hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF499OUD bed narrowPeak optimal idr thresholded peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF154EAD, ENCFF740MCA, ENCFF804HAX 358511 ENCODE Processing Pipeline 7009bdfb16748b7dc7f7f7d5c9b2d1ec https://www.encodeproject.org/files/ENCFF499OUD/@@download/ENCFF499OUD.bed.gz hg19 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF004ZJG bigWig signal p-value ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF503HYC, ENCFF570JEY, ENCFF599KFZ 505590811 ENCODE Processing Pipeline 72992672c6d2b5d2775d4bc43c4f06c8 https://www.encodeproject.org/files/ENCFF004ZJG/@@download/ENCFF004ZJG.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF118SDO bigWig signal p-value ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF570JEY, ENCFF599KFZ 390621217 ENCODE Processing Pipeline 04a4c4d0266a7bc719281b9f11c49e89 https://www.encodeproject.org/files/ENCFF118SDO/@@download/ENCFF118SDO.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF633WUK bigWig signal p-value ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF503HYC, ENCFF570JEY 405872461 ENCODE Processing Pipeline 8733f5040a5a98e8578e61b9d647788d https://www.encodeproject.org/files/ENCFF633WUK/@@download/ENCFF633WUK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF254OPR bigWig fold change over control ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF503HYC, ENCFF570JEY 331290140 ENCODE Processing Pipeline 41b2a99dec34e837a0e547013c1c6a7c https://www.encodeproject.org/files/ENCFF254OPR/@@download/ENCFF254OPR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF593PKX bigBed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF816QLR 13204134 ENCODE Processing Pipeline fa0fca17f6fd4b1ee5906b2cbae60f19 https://www.encodeproject.org/files/ENCFF593PKX/@@download/ENCFF593PKX.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF587VEY bed narrowPeak optimal idr thresholded peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF507TCH, ENCFF779OLY, ENCFF816QLR 388850 ENCODE Processing Pipeline 7f339ae5c3f68eb9a3314fbfe0ba42d2 https://www.encodeproject.org/files/ENCFF587VEY/@@download/ENCFF587VEY.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF165UOQ bigWig fold change over control ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF503HYC, ENCFF570JEY, ENCFF599KFZ 524629566 ENCODE Processing Pipeline 75a89cc04066550c843ab268a44f1f3d https://www.encodeproject.org/files/ENCFF165UOQ/@@download/ENCFF165UOQ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF564GMB bigBed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF779OLY 10332893 ENCODE Processing Pipeline c89503aa7c350554724eb72d53e500cd https://www.encodeproject.org/files/ENCFF564GMB/@@download/ENCFF564GMB.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF910CRE bed narrowPeak conservative idr thresholded peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF507TCH, ENCFF779OLY, ENCFF816QLR 301664 ENCODE Processing Pipeline cd42b411f03034a66c4796f2d66d059f https://www.encodeproject.org/files/ENCFF910CRE/@@download/ENCFF910CRE.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF695AWD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF587VEY 814606 ENCODE Processing Pipeline 9759915e10c11a67de7a79d8e2a2de86 https://www.encodeproject.org/files/ENCFF695AWD/@@download/ENCFF695AWD.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF721BAK bigWig fold change over control ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF570JEY, ENCFF599KFZ 262500607 ENCODE Processing Pipeline bcb342d4532582f3fefa1df084b79e03 https://www.encodeproject.org/files/ENCFF721BAK/@@download/ENCFF721BAK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF507TCH bed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF503HYC, ENCFF570JEY 5083107 ENCODE Processing Pipeline 3089c9b90b82f0aed640f4ac6bada9e1 https://www.encodeproject.org/files/ENCFF507TCH/@@download/ENCFF507TCH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF779OLY bed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1 ENCFF570JEY, ENCFF599KFZ 4275415 ENCODE Processing Pipeline 13b222c1934c78fa7529f013006127a5 https://www.encodeproject.org/files/ENCFF779OLY/@@download/ENCFF779OLY.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF627LHE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF910CRE 555706 ENCODE Processing Pipeline eccc2047b07666a4dada36b1d82610ac https://www.encodeproject.org/files/ENCFF627LHE/@@download/ENCFF627LHE.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF816QLR bed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF503HYC, ENCFF570JEY, ENCFF599KFZ 5594303 ENCODE Processing Pipeline 3fb169706d3eb44d0fb5cfba44c8dfdb https://www.encodeproject.org/files/ENCFF816QLR/@@download/ENCFF816QLR.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF308DQU bigBed narrowPeak peaks ENCSR000BRF ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol JUND-human ENCAB000AID DNA see document see document False 2012-09-10 ENCODE 2 ENCFF507TCH 10847069 ENCODE Processing Pipeline 90f4e948b3aff22319eed9be7a65fe83 https://www.encodeproject.org/files/ENCFF308DQU/@@download/ENCFF308DQU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, low read depth, moderate library complexity biological replicates with identical biosample ENCFF000NUM bigBed broadPeak peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 1 ENCFF001TWS 94661 Richard Myers, HAIB ece0537aaeb6fad2c856630b610c6c8a https://www.encodeproject.org/files/ENCFF000NUM/@@download/ENCFF000NUM.bigBed hg19 archived low read length, low read depth ENCFF000NUN bigWig raw signal ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 1 24402788 Richard Myers, HAIB a4c82c8f1666654f8c17082ba299fa77 https://www.encodeproject.org/files/ENCFF000NUN/@@download/ENCFF000NUN.bigWig hg19 archived low read length, low read depth missing derived_from ENCFF000NUO bam alignments ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF000NVB 1502945345 Richard Myers, HAIB 46f751378a350a44034c0a79c3c5577a https://www.encodeproject.org/files/ENCFF000NUO/@@download/ENCFF000NUO.bam hg19 archived low read length, low read depth ENCFF000NVB fastq reads ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 1 36 single-ended 1293018872 Richard Myers, HAIB 2578cb5e97d34448e0dd4e471130dc12 https://www.encodeproject.org/files/ENCFF000NVB/@@download/ENCFF000NVB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000ODJ/ released inconsistent control read length, low read length, low read depth ENCFF001TWS bed broadPeak peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 1 33790 Richard Myers, HAIB 7188e3bd287afd83582b17a77aa402c4 https://www.encodeproject.org/files/ENCFF001TWS/@@download/ENCFF001TWS.bed.gz hg19 archived low read length, low read depth missing derived_from ENCFF002CGW bed narrowPeak optimal idr thresholded peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 424286 ENCODE Consortium Analysis Working Group 8cf58cb06c7dc27907e9926a5f293f4b https://www.encodeproject.org/files/ENCFF002CGW/@@download/ENCFF002CGW.bed.gz hg19 archived low read length, low read depth missing derived_from ENCFF863RPA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE ENCFF002CGW 1182745 ENCODE Consortium f31ee7ac9e16998704d82dd63fa5b8d2 https://www.encodeproject.org/files/ENCFF863RPA/@@download/ENCFF863RPA.bigBed hg19 archived low read length, low read depth ENCFF347QCT bam unfiltered alignments ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 25 ENCFF000NVB, ENCFF643CGH 1459430058 ENCODE Processing Pipeline 6de32910465f6bcf0e67601c8bd05f8f https://www.encodeproject.org/files/ENCFF347QCT/@@download/ENCFF347QCT.bam GRCh38 released low read length, low read depth ENCFF100VNU bam alignments ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 25 ENCFF000NVB, ENCFF643CGH 492700527 ENCODE Processing Pipeline 136bdc266af65fa315799ccb4a6d63f0 https://www.encodeproject.org/files/ENCFF100VNU/@@download/ENCFF100VNU.bam GRCh38 released low read length, low read depth ENCFF857OMT bam unfiltered alignments ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 25 ENCFF000NVB, ENCFF807MUK 1455490626 ENCODE Processing Pipeline 5c6682eb4e379a7fc8db727bdfb87f19 https://www.encodeproject.org/files/ENCFF857OMT/@@download/ENCFF857OMT.bam hg19 released low read length, low read depth ENCFF436AVX bam alignments ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 25 ENCFF000NVB, ENCFF807MUK 490876518 ENCODE Processing Pipeline da2c6de8972ecab02e4b3e3d8ee4d559 https://www.encodeproject.org/files/ENCFF436AVX/@@download/ENCFF436AVX.bam hg19 released low read length, low read depth ENCFF287JUG bed narrowPeak peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF100VNU, ENCFF289ONG 4634393 ENCODE Processing Pipeline 7d7c1af62eb44f5910ae5aee1824c849 https://www.encodeproject.org/files/ENCFF287JUG/@@download/ENCFF287JUG.bed.gz GRCh38 released low read length, low read depth ENCFF357OHD bigWig fold change over control ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF100VNU, ENCFF289ONG 290950842 ENCODE Processing Pipeline 0be2eef88b9a57613f5d13a70da4334e https://www.encodeproject.org/files/ENCFF357OHD/@@download/ENCFF357OHD.bigWig GRCh38 released low read length, low read depth ENCFF621BPK bigBed narrowPeak peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF287JUG 10799751 ENCODE Processing Pipeline 86741f766571713a5cc4327ae47dde51 https://www.encodeproject.org/files/ENCFF621BPK/@@download/ENCFF621BPK.bigBed GRCh38 released low read length, low read depth ENCFF033EGO bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF341EJT 139942 ENCODE Processing Pipeline 0a3a781b995bc781c4b02c6b7d98cb70 https://www.encodeproject.org/files/ENCFF033EGO/@@download/ENCFF033EGO.bigBed GRCh38 released low read length, low read depth ENCFF341EJT bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF287JUG, ENCFF419RSJ 50082 ENCODE Processing Pipeline 82b3444a27d4545414406b83892b3be5 https://www.encodeproject.org/files/ENCFF341EJT/@@download/ENCFF341EJT.bed.gz GRCh38 released low read length, low read depth ENCFF451FUH bigWig signal p-value ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF100VNU, ENCFF289ONG 478160644 ENCODE Processing Pipeline 7327bc13b58ada25366b352a50c9ef32 https://www.encodeproject.org/files/ENCFF451FUH/@@download/ENCFF451FUH.bigWig GRCh38 released low read length, low read depth ENCFF624CPW bigWig fold change over control ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF416BIN, ENCFF436AVX 295982973 ENCODE Processing Pipeline 52ba13bee0f9e790f2d2152a43b63491 https://www.encodeproject.org/files/ENCFF624CPW/@@download/ENCFF624CPW.bigWig hg19 released low read length, low read depth ENCFF615RBF bigBed narrowPeak peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF958SWO 10770230 ENCODE Processing Pipeline d2da3c1bc15bc7141aa0cda486574de4 https://www.encodeproject.org/files/ENCFF615RBF/@@download/ENCFF615RBF.bigBed hg19 released low read length, low read depth ENCFF618EFD bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF001TDO, ENCFF958SWO 48934 ENCODE Processing Pipeline 5086b8288dcbb4e9f5152cf6c7338a68 https://www.encodeproject.org/files/ENCFF618EFD/@@download/ENCFF618EFD.bed.gz hg19 released low read length, low read depth ENCFF361MGY bigWig signal p-value ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF416BIN, ENCFF436AVX 408390119 ENCODE Processing Pipeline 291a04d3c5d8c5944af20196047b8ebd https://www.encodeproject.org/files/ENCFF361MGY/@@download/ENCFF361MGY.bigWig hg19 released low read length, low read depth ENCFF656NCQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF618EFD 137957 ENCODE Processing Pipeline 1c568a6e7aed1c6b08730df62596b7c9 https://www.encodeproject.org/files/ENCFF656NCQ/@@download/ENCFF656NCQ.bigBed hg19 released low read length, low read depth ENCFF958SWO bed narrowPeak peaks ENCSR000BRG ChIP-seq EFO:0002784 GM12878 immortalized cell line adult female unknown Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2012-02-29 ENCODE 3 ENCFF416BIN, ENCFF436AVX 4694893 ENCODE Processing Pipeline aaf0e7309f3fc86723d38df8d2827e8f https://www.encodeproject.org/files/ENCFF958SWO/@@download/ENCFF958SWO.bed.gz hg19 released low read length, low read depth ENCFF000OIN bam alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000OIW 864237160 Richard Myers, HAIB 333051d5e92fb2aaa50ec2f4a2ae8ffa https://www.encodeproject.org/files/ENCFF000OIN/@@download/ENCFF000OIN.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIO bam alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000OIZ 969162882 Richard Myers, HAIB 0854fcc30267af44b7bcc8a46e2ea5d4 https://www.encodeproject.org/files/ENCFF000OIO/@@download/ENCFF000OIO.bam hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIP bigBed broadPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001TZY 899371 Richard Myers, HAIB ce945ce719da50c390c8c435a8fdd18b https://www.encodeproject.org/files/ENCFF000OIP/@@download/ENCFF000OIP.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIQ bigBed broadPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001TZZ 1064105 Richard Myers, HAIB d775930c4f67c1ed42205715d06dddaa https://www.encodeproject.org/files/ENCFF000OIQ/@@download/ENCFF000OIQ.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIS bigWig raw signal ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 35845322 Richard Myers, HAIB 7ef1e44404e213c896c86d5ea8e1bba9 https://www.encodeproject.org/files/ENCFF000OIS/@@download/ENCFF000OIS.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OIU bigWig raw signal ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 33677584 Richard Myers, HAIB 0bc5bc3657a34c75bec7d923fd8d3d48 https://www.encodeproject.org/files/ENCFF000OIU/@@download/ENCFF000OIU.bigWig hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000OIW fastq reads ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 891316650 Richard Myers, HAIB df865b0a0f076e0f34b0cd233537cafd https://www.encodeproject.org/files/ENCFF000OIW/@@download/ENCFF000OIW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000OIZ fastq reads ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1077310720 Richard Myers, HAIB 87cc4dcd0179529cfc04d1505aab268a https://www.encodeproject.org/files/ENCFF000OIZ/@@download/ENCFF000OIZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000OJU/ released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF001TZY bed broadPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 515455 Richard Myers, HAIB e77162506d0ab08fe1744e5c8714e7a0 https://www.encodeproject.org/files/ENCFF001TZY/@@download/ENCFF001TZY.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001TZZ bed broadPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 529219 Richard Myers, HAIB 39376eced4553f022cc5f70aa5440ee8 https://www.encodeproject.org/files/ENCFF001TZZ/@@download/ENCFF001TZZ.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CIH bed narrowPeak optimal idr thresholded peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 404939 ENCODE Consortium Analysis Working Group 7b901ec2e549aabcdab6ad4450d419e4 https://www.encodeproject.org/files/ENCFF002CIH/@@download/ENCFF002CIH.bed.gz hg19 archived control low read depth, low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF985GDR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CIH 1124408 ENCODE Consortium 1271f03d1a2e3af619d47176a7ce5358 https://www.encodeproject.org/files/ENCFF985GDR/@@download/ENCFF985GDR.bigBed hg19 archived control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF604QBL bam unfiltered alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIW, ENCFF643CGH 1117623567 ENCODE Processing Pipeline 86d8634f8f31635fb74bbcb857227c82 https://www.encodeproject.org/files/ENCFF604QBL/@@download/ENCFF604QBL.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF453WOE bam alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIW, ENCFF643CGH 698240258 ENCODE Processing Pipeline 1d5072342afd24285393c54dc6b5e2f0 https://www.encodeproject.org/files/ENCFF453WOE/@@download/ENCFF453WOE.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF052MCH bam unfiltered alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIZ, ENCFF643CGH 1325191957 ENCODE Processing Pipeline d4e0f8f6e8b66b46f95fed33717f8f3e https://www.encodeproject.org/files/ENCFF052MCH/@@download/ENCFF052MCH.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF653FWT bam alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIZ, ENCFF643CGH 753220088 ENCODE Processing Pipeline 83b1a536a728d791571667895926fa1f https://www.encodeproject.org/files/ENCFF653FWT/@@download/ENCFF653FWT.bam GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF760QHP bam unfiltered alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIW, ENCFF807MUK 1116445094 ENCODE Processing Pipeline 96ee39132efffb373efaa907ef8fe1ab https://www.encodeproject.org/files/ENCFF760QHP/@@download/ENCFF760QHP.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF331AQC bam alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000OIW, ENCFF807MUK 692667752 ENCODE Processing Pipeline dd01f7065da72f81e96f3b1d5d66d9be https://www.encodeproject.org/files/ENCFF331AQC/@@download/ENCFF331AQC.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF388SYU bam unfiltered alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIZ, ENCFF807MUK 1323371307 ENCODE Processing Pipeline 282308e356c93b703cb764da7cad9d07 https://www.encodeproject.org/files/ENCFF388SYU/@@download/ENCFF388SYU.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF624MYA bam alignments ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000OIZ, ENCFF807MUK 747653763 ENCODE Processing Pipeline 1e46a40e44edaedfbc7e925140aa65f6 https://www.encodeproject.org/files/ENCFF624MYA/@@download/ENCFF624MYA.bam hg19 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF320MZV bigWig signal p-value ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF653FWT, ENCFF857FLV 330387297 ENCODE Processing Pipeline cf0bbe3bd47eeb6dfcfbb5e1ad924917 https://www.encodeproject.org/files/ENCFF320MZV/@@download/ENCFF320MZV.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF378BNL bigWig signal p-value ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF453WOE, ENCFF857FLV 319781002 ENCODE Processing Pipeline 66bd4c58c874ef31d52a72fe731ee199 https://www.encodeproject.org/files/ENCFF378BNL/@@download/ENCFF378BNL.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF777QET bigWig fold change over control ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF653FWT, ENCFF857FLV 258040918 ENCODE Processing Pipeline 9ac96a3e6ac0fef8bc0e58d3fe497b61 https://www.encodeproject.org/files/ENCFF777QET/@@download/ENCFF777QET.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF728FEX bigWig signal p-value ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF453WOE, ENCFF653FWT, ENCFF857FLV 324299466 ENCODE Processing Pipeline edf9a46887a0ea374d88b71cfd27cb16 https://www.encodeproject.org/files/ENCFF728FEX/@@download/ENCFF728FEX.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF155DEW bigWig fold change over control ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF453WOE, ENCFF857FLV 255233556 ENCODE Processing Pipeline 1289869bcd8bb64dc3a5f7076f4c0d1f https://www.encodeproject.org/files/ENCFF155DEW/@@download/ENCFF155DEW.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF724GDC bigWig fold change over control ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF453WOE, ENCFF653FWT, ENCFF857FLV 439192137 ENCODE Processing Pipeline 28f2eacb509ef2c31780739071313956 https://www.encodeproject.org/files/ENCFF724GDC/@@download/ENCFF724GDC.bigWig GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF848AAQ bed narrowPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF453WOE, ENCFF857FLV 6403495 ENCODE Processing Pipeline 4d63f4aa1ed8d32bc53e394ffc90b47e https://www.encodeproject.org/files/ENCFF848AAQ/@@download/ENCFF848AAQ.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF126FHG bigBed narrowPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF848AAQ 12256886 ENCODE Processing Pipeline 3c13d8e5818169ae915b31305eb25c05 https://www.encodeproject.org/files/ENCFF126FHG/@@download/ENCFF126FHG.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF842LIC bed narrowPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF653FWT, ENCFF857FLV 6214514 ENCODE Processing Pipeline cbaf84d41827ed0ffa1e4d09a52ceda3 https://www.encodeproject.org/files/ENCFF842LIC/@@download/ENCFF842LIC.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF515RFW bed narrowPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF453WOE, ENCFF653FWT, ENCFF857FLV 6935755 ENCODE Processing Pipeline aa972148d9e4146828afd621f4fa5d19 https://www.encodeproject.org/files/ENCFF515RFW/@@download/ENCFF515RFW.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF473XPS bigBed narrowPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF842LIC 12260820 ENCODE Processing Pipeline b6d8239ead4d80fc86b949abf85dccdc https://www.encodeproject.org/files/ENCFF473XPS/@@download/ENCFF473XPS.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF021HUZ bed narrowPeak optimal idr thresholded peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF515RFW, ENCFF842LIC, ENCFF848AAQ 484674 ENCODE Processing Pipeline c14c28e95934fc2cb0892624e9940ce6 https://www.encodeproject.org/files/ENCFF021HUZ/@@download/ENCFF021HUZ.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF207DVP bigBed narrowPeak conservative idr thresholded peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF694NSV 1017822 ENCODE Processing Pipeline b85277e966984a6d821c1f9e93ed7bc0 https://www.encodeproject.org/files/ENCFF207DVP/@@download/ENCFF207DVP.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF876JMP bigBed narrowPeak peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF515RFW 12234087 ENCODE Processing Pipeline 97cc0e0fdc8bb9b2e9e738f2a55ed9bc https://www.encodeproject.org/files/ENCFF876JMP/@@download/ENCFF876JMP.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF694NSV bed narrowPeak conservative idr thresholded peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF515RFW, ENCFF842LIC, ENCFF848AAQ 450523 ENCODE Processing Pipeline ad4b02720a71fb35a8bc45ce613a61ca https://www.encodeproject.org/files/ENCFF694NSV/@@download/ENCFF694NSV.bed.gz GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF755XIG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BIK ChIP-seq EFO:0002785 GM12891 immortalized cell line unknown male unknown Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021HUZ 1073021 ENCODE Processing Pipeline 46d24133240d47bfac1b9f5c10bb54be https://www.encodeproject.org/files/ENCFF755XIG/@@download/ENCFF755XIG.bigBed GRCh38 released control low read depth, low read length, low read depth biological replicates with identical biosample ENCFF000PHA bam alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PHP 894265663 Richard Myers, HAIB 8b7fc681260515ab8af8ca49624b8cd3 https://www.encodeproject.org/files/ENCFF000PHA/@@download/ENCFF000PHA.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PHB bam alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PHM 795779058 Richard Myers, HAIB 7f7a0b731e1608acbda38e28954d3c30 https://www.encodeproject.org/files/ENCFF000PHB/@@download/ENCFF000PHB.bam hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PHC bigBed broadPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UFQ 461150 Richard Myers, HAIB 1ead84d92eaa83b38350d788b6f0a2d1 https://www.encodeproject.org/files/ENCFF000PHC/@@download/ENCFF000PHC.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PHD bigBed broadPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UFR 564696 Richard Myers, HAIB 51035568107847bca1b00768ad6e54c6 https://www.encodeproject.org/files/ENCFF000PHD/@@download/ENCFF000PHD.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF000PHF bigWig raw signal ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 16821541 Richard Myers, HAIB 913ced893ed93c6d73e8b055ec692050 https://www.encodeproject.org/files/ENCFF000PHF/@@download/ENCFF000PHF.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PHH bigWig raw signal ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 13344856 Richard Myers, HAIB 8b7af51eb558844b97c5d3d26d2aab80 https://www.encodeproject.org/files/ENCFF000PHH/@@download/ENCFF000PHH.bigWig hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF000PHM fastq reads ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 717724257 Richard Myers, HAIB ff7e138a59ee1766c35b2611056bedef https://www.encodeproject.org/files/ENCFF000PHM/@@download/ENCFF000PHM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POV/ released low read length, low read depth biological replicates with identical biosample ENCFF000PHP fastq reads ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 778014245 Richard Myers, HAIB 3c39b94a12fca08614134706d48025fe https://www.encodeproject.org/files/ENCFF000PHP/@@download/ENCFF000PHP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000POU/ released low read length, low read depth biological replicates with identical biosample ENCFF001UFQ bed broadPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 251629 Richard Myers, HAIB cb0aa339f492621d69f92eee6ccde2f1 https://www.encodeproject.org/files/ENCFF001UFQ/@@download/ENCFF001UFQ.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF001UFR bed broadPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 313975 Richard Myers, HAIB b4a909a798cddcb0833a8a96552484bd https://www.encodeproject.org/files/ENCFF001UFR/@@download/ENCFF001UFR.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF002CKG bed narrowPeak optimal idr thresholded peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 454270 ENCODE Consortium Analysis Working Group 9a253e2d8586d1180b2c4629c75a7d23 https://www.encodeproject.org/files/ENCFF002CKG/@@download/ENCFF002CKG.bed.gz hg19 archived low read length, low read depth missing derived_from, biological replicates with identical biosample ENCFF654FDA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE ENCFF002CKG 1125582 ENCODE Consortium ea19e0d950c7e329bda9e008c1151e8a https://www.encodeproject.org/files/ENCFF654FDA/@@download/ENCFF654FDA.bigBed hg19 archived low read length, low read depth biological replicates with identical biosample ENCFF912KZI bam unfiltered alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHM, ENCFF643CGH 915546022 ENCODE Processing Pipeline 1db6ba6a8cece9b82de826e2925b9a59 https://www.encodeproject.org/files/ENCFF912KZI/@@download/ENCFF912KZI.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF930EXY bam alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHM, ENCFF643CGH 621893194 ENCODE Processing Pipeline 40d33abb66b12e2c281d1ccfcbb9873b https://www.encodeproject.org/files/ENCFF930EXY/@@download/ENCFF930EXY.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF420PHM bam unfiltered alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PHP, ENCFF643CGH 1054005883 ENCODE Processing Pipeline c301909c7007c20742efce6b03fe69dd https://www.encodeproject.org/files/ENCFF420PHM/@@download/ENCFF420PHM.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF418EVV bam alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PHP, ENCFF643CGH 691222732 ENCODE Processing Pipeline 8f382f96185d4ff77d6461257262ae58 https://www.encodeproject.org/files/ENCFF418EVV/@@download/ENCFF418EVV.bam GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF386BYM bam unfiltered alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHM, ENCFF807MUK 912494423 ENCODE Processing Pipeline 5f0a7bad96ed64730f5110b4b5ab2383 https://www.encodeproject.org/files/ENCFF386BYM/@@download/ENCFF386BYM.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF319HSK bam alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PHM, ENCFF807MUK 622207480 ENCODE Processing Pipeline 6fae728c3659535289b1138b2b666310 https://www.encodeproject.org/files/ENCFF319HSK/@@download/ENCFF319HSK.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF081HCC bam alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PHP, ENCFF807MUK 691538155 ENCODE Processing Pipeline 675268d781719a127f7414e6be8969d8 https://www.encodeproject.org/files/ENCFF081HCC/@@download/ENCFF081HCC.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF648SQX bam unfiltered alignments ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PHP, ENCFF807MUK 1050876839 ENCODE Processing Pipeline 4c075084de0035c6ba1add382bd10e80 https://www.encodeproject.org/files/ENCFF648SQX/@@download/ENCFF648SQX.bam hg19 released low read length, low read depth biological replicates with identical biosample ENCFF555TME bigWig signal p-value ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF175NMQ, ENCFF930EXY 454816404 ENCODE Processing Pipeline c4fac56f5ea56dab79cfb6a4b32cca57 https://www.encodeproject.org/files/ENCFF555TME/@@download/ENCFF555TME.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF202EAL bigWig signal p-value ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF418EVV 526992028 ENCODE Processing Pipeline 420251d69afd8b7c494718eed51ec3d4 https://www.encodeproject.org/files/ENCFF202EAL/@@download/ENCFF202EAL.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF243HPU bigWig signal p-value ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF175NMQ, ENCFF285LVE, ENCFF418EVV, ENCFF930EXY 757499629 ENCODE Processing Pipeline 611e3ba3afd8e9939aa60e9239d3c32b https://www.encodeproject.org/files/ENCFF243HPU/@@download/ENCFF243HPU.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF592MEJ bigWig fold change over control ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF418EVV 359857636 ENCODE Processing Pipeline 345ccab6186023e9bb521757df08ac54 https://www.encodeproject.org/files/ENCFF592MEJ/@@download/ENCFF592MEJ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF938ZUJ bigWig fold change over control ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF175NMQ, ENCFF930EXY 336694342 ENCODE Processing Pipeline 2f03a86854f4c4d11bb52e2eb57abeca https://www.encodeproject.org/files/ENCFF938ZUJ/@@download/ENCFF938ZUJ.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF979PVN bigWig fold change over control ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF175NMQ, ENCFF285LVE, ENCFF418EVV, ENCFF930EXY 780746965 ENCODE Processing Pipeline 853143581e34ce16bc93b1599cb1287e https://www.encodeproject.org/files/ENCFF979PVN/@@download/ENCFF979PVN.bigWig GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF178KNN bigBed narrowPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF047ASF 11002670 ENCODE Processing Pipeline 9dd38e61028066373f759e5f612192bd https://www.encodeproject.org/files/ENCFF178KNN/@@download/ENCFF178KNN.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF047ASF bed narrowPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF285LVE, ENCFF418EVV 5032062 ENCODE Processing Pipeline b4be2b473de1ee990d933703d47f420d https://www.encodeproject.org/files/ENCFF047ASF/@@download/ENCFF047ASF.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF707MYD bed narrowPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF175NMQ, ENCFF285LVE, ENCFF418EVV, ENCFF930EXY 6001424 ENCODE Processing Pipeline 6018d0c295a3224873a7034ece1cace0 https://www.encodeproject.org/files/ENCFF707MYD/@@download/ENCFF707MYD.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF315YYL bed narrowPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF175NMQ, ENCFF930EXY 4680505 ENCODE Processing Pipeline abd5034c60bea2c1a73e79c678393c8a https://www.encodeproject.org/files/ENCFF315YYL/@@download/ENCFF315YYL.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF894FKT bigBed narrowPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF315YYL 10689397 ENCODE Processing Pipeline 2064caf685d860aa7d2322625d150388 https://www.encodeproject.org/files/ENCFF894FKT/@@download/ENCFF894FKT.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF541XKB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF840RWO 705525 ENCODE Processing Pipeline fce9460de28a5e67899e35bf02d78e73 https://www.encodeproject.org/files/ENCFF541XKB/@@download/ENCFF541XKB.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF158HPH bigBed narrowPeak peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF707MYD 13557761 ENCODE Processing Pipeline dd737cec0fc004de43c4fcac018e03cd https://www.encodeproject.org/files/ENCFF158HPH/@@download/ENCFF158HPH.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF840RWO bed narrowPeak optimal idr thresholded peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF047ASF, ENCFF315YYL, ENCFF419RSJ, ENCFF707MYD 375426 ENCODE Processing Pipeline 62d1f811c24b215f6b5501fe53ed41fd https://www.encodeproject.org/files/ENCFF840RWO/@@download/ENCFF840RWO.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF390NSZ bed narrowPeak conservative idr thresholded peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF047ASF, ENCFF315YYL, ENCFF419RSJ, ENCFF707MYD 338919 ENCODE Processing Pipeline 1582e8c0815cc61b3d476713ce41142b https://www.encodeproject.org/files/ENCFF390NSZ/@@download/ENCFF390NSZ.bed.gz GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF853ZLQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMZ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF390NSZ 654944 ENCODE Processing Pipeline 6674e34afa2e10fcd39be11dc11b1d0d https://www.encodeproject.org/files/ENCFF853ZLQ/@@download/ENCFF853ZLQ.bigBed GRCh38 released low read length, low read depth biological replicates with identical biosample ENCFF000RID bam alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000RIL 484243697 Richard Myers, HAIB aa8fe807afe218feb7455ea56ba00184 https://www.encodeproject.org/files/ENCFF000RID/@@download/ENCFF000RID.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RIE bigBed broadPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001URJ 955098 Richard Myers, HAIB 28d1a695d73595f49008b7ef2a9d5ea1 https://www.encodeproject.org/files/ENCFF000RIE/@@download/ENCFF000RIE.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RIF bigBed broadPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001URK 1437304 Richard Myers, HAIB 68ac4453fce6a6820ff20f2da713eb46 https://www.encodeproject.org/files/ENCFF000RIF/@@download/ENCFF000RIF.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RIG bam alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000RIR 856465177 Richard Myers, HAIB 2a02366c67fb824a8af1b7b8ec625593 https://www.encodeproject.org/files/ENCFF000RIG/@@download/ENCFF000RIG.bam hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RII bigWig raw signal ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 1 18617685 Richard Myers, HAIB 0e6e84844d22ca2ec73ba9b8966b2d79 https://www.encodeproject.org/files/ENCFF000RII/@@download/ENCFF000RII.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RIJ bigWig raw signal ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 1 31602958 Richard Myers, HAIB 4169bd687f981a2e24b35351045605f5 https://www.encodeproject.org/files/ENCFF000RIJ/@@download/ENCFF000RIJ.bigWig hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RIL fastq reads ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 382757887 Richard Myers, HAIB 73767adb539c94094b6befa057a522b9 https://www.encodeproject.org/files/ENCFF000RIL/@@download/ENCFF000RIL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RJV/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RIR fastq reads ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 768762743 Richard Myers, HAIB b347d2d1f855d2ed569c6bce05384b23 https://www.encodeproject.org/files/ENCFF000RIR/@@download/ENCFF000RIR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RJV/ released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001URJ bed broadPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 1 590367 Richard Myers, HAIB 6aef3c6a0f0260ee73495b98dde75329 https://www.encodeproject.org/files/ENCFF001URJ/@@download/ENCFF001URJ.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001URK bed broadPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 1 975427 Richard Myers, HAIB 47933a0b106666508a61272d5e9cbe99 https://www.encodeproject.org/files/ENCFF001URK/@@download/ENCFF001URK.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CNX bed narrowPeak optimal idr thresholded peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 790455 ENCODE Consortium Analysis Working Group 354cc51173bb51f774fddb577c87c857 https://www.encodeproject.org/files/ENCFF002CNX/@@download/ENCFF002CNX.bed.gz hg19 archived low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF089ZPR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE ENCFF002CNX 1621730 ENCODE Consortium a67cf51b1a966a5494e7eec961208e9c https://www.encodeproject.org/files/ENCFF089ZPR/@@download/ENCFF089ZPR.bigBed hg19 archived low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF637HYH bam unfiltered alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIL, ENCFF643CGH 554029511 ENCODE Processing Pipeline 76eb6e3be99c9da17cf7c70ce3931408 https://www.encodeproject.org/files/ENCFF637HYH/@@download/ENCFF637HYH.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF318GHN bam alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIL, ENCFF643CGH 369188505 ENCODE Processing Pipeline 76aad04dbb4dd5f2e902726ca80b20b1 https://www.encodeproject.org/files/ENCFF318GHN/@@download/ENCFF318GHN.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF899RIL bam unfiltered alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIR, ENCFF643CGH 1020185406 ENCODE Processing Pipeline 2ac725c0778051ac2d81e42aa2c8f9b6 https://www.encodeproject.org/files/ENCFF899RIL/@@download/ENCFF899RIL.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF012QZM bam alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIR, ENCFF643CGH 650655809 ENCODE Processing Pipeline 9ca1f2cdd2a59dc672ff002c5c61de85 https://www.encodeproject.org/files/ENCFF012QZM/@@download/ENCFF012QZM.bam GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF589STQ bam unfiltered alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIL, ENCFF807MUK 551483205 ENCODE Processing Pipeline e192071bc987fb82625224859ebea102 https://www.encodeproject.org/files/ENCFF589STQ/@@download/ENCFF589STQ.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF185XXN bam alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000RIL, ENCFF807MUK 369433108 ENCODE Processing Pipeline 4956bf2e0afda6ea5218e54d01079ea3 https://www.encodeproject.org/files/ENCFF185XXN/@@download/ENCFF185XXN.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF125RVN bam unfiltered alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIR, ENCFF807MUK 1016164986 ENCODE Processing Pipeline 57b691a0935882e180ea5f0d25daec38 https://www.encodeproject.org/files/ENCFF125RVN/@@download/ENCFF125RVN.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF220EVN bam alignments ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000RIR, ENCFF807MUK 651008145 ENCODE Processing Pipeline 485b6be366b9c1f4dbaea0931fe159d6 https://www.encodeproject.org/files/ENCFF220EVN/@@download/ENCFF220EVN.bam hg19 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF776CSH bigWig signal p-value ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF318GHN, ENCFF503VFG 417308655 ENCODE Processing Pipeline 0e892b9065e93d95d4ce719eb5a7c102 https://www.encodeproject.org/files/ENCFF776CSH/@@download/ENCFF776CSH.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF153URJ bigWig signal p-value ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF012QZM, ENCFF318GHN, ENCFF503VFG 561948493 ENCODE Processing Pipeline 4d2da8a79c52cf04778c90c769954eb5 https://www.encodeproject.org/files/ENCFF153URJ/@@download/ENCFF153URJ.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF227BKF bigWig signal p-value ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF012QZM, ENCFF503VFG 538046602 ENCODE Processing Pipeline 8ad2dcefba996f4a61f7cdfef5a2fafb https://www.encodeproject.org/files/ENCFF227BKF/@@download/ENCFF227BKF.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF029WIH bigWig fold change over control ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF318GHN, ENCFF503VFG 263058467 ENCODE Processing Pipeline 255a985753420483ef07c719a43939a1 https://www.encodeproject.org/files/ENCFF029WIH/@@download/ENCFF029WIH.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF079MWL bigWig fold change over control ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF012QZM, ENCFF318GHN, ENCFF503VFG 515242348 ENCODE Processing Pipeline c756223cebc0ba2a5873c58e5197a4d2 https://www.encodeproject.org/files/ENCFF079MWL/@@download/ENCFF079MWL.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF179ZZV bigWig fold change over control ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF012QZM, ENCFF503VFG 339837608 ENCODE Processing Pipeline acda450c000f2ef439fc0d071c650b46 https://www.encodeproject.org/files/ENCFF179ZZV/@@download/ENCFF179ZZV.bigWig GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF174AHG bed narrowPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF012QZM, ENCFF318GHN, ENCFF503VFG 5693993 ENCODE Processing Pipeline d51c298f89759073e98f27b47067aac4 https://www.encodeproject.org/files/ENCFF174AHG/@@download/ENCFF174AHG.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF535HCL bigBed narrowPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF414HLY 10571219 ENCODE Processing Pipeline b1a0644ee29048a556a3a3db2fc9779a https://www.encodeproject.org/files/ENCFF535HCL/@@download/ENCFF535HCL.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF010TVF bed narrowPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF012QZM, ENCFF503VFG 5084065 ENCODE Processing Pipeline ebb2c1a2a640870e03a5fee3bafde3b6 https://www.encodeproject.org/files/ENCFF010TVF/@@download/ENCFF010TVF.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF414HLY bed narrowPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF318GHN, ENCFF503VFG 4620706 ENCODE Processing Pipeline e0be5a02034e2485ccaa22106aabc82f https://www.encodeproject.org/files/ENCFF414HLY/@@download/ENCFF414HLY.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF515CHS bigBed narrowPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF174AHG 11283755 ENCODE Processing Pipeline 8cd8c6528ff73745140e4985423cebe4 https://www.encodeproject.org/files/ENCFF515CHS/@@download/ENCFF515CHS.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF770KLC bigBed narrowPeak peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF010TVF 10924638 ENCODE Processing Pipeline 68ae2338f3cd5bb1990c22702185ae6c https://www.encodeproject.org/files/ENCFF770KLC/@@download/ENCFF770KLC.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF593ZQY bed narrowPeak conservative idr thresholded peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF010TVF, ENCFF174AHG, ENCFF414HLY, ENCFF419RSJ 620872 ENCODE Processing Pipeline 09821d54ac3d506fa7aff2958d02ec46 https://www.encodeproject.org/files/ENCFF593ZQY/@@download/ENCFF593ZQY.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF945NWB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF420MLJ 1290312 ENCODE Processing Pipeline 8d87707020343e15ff17299618e39afe https://www.encodeproject.org/files/ENCFF945NWB/@@download/ENCFF945NWB.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF420MLJ bed narrowPeak optimal idr thresholded peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF010TVF, ENCFF174AHG, ENCFF414HLY, ENCFF419RSJ 768654 ENCODE Processing Pipeline f95101c6a929df71c22b3220171b54dc https://www.encodeproject.org/files/ENCFF420MLJ/@@download/ENCFF420MLJ.bed.gz GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF723WDT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKY ChIP-seq EFO:0001247 T47D immortalized cell line adult female 54 year Homo sapiens dimethyl sulfoxide FOXA1-human ENCAB000AGN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF593ZQY 1105474 ENCODE Processing Pipeline 684985548dc7b0cb31f8a41aa8cdd4e8 https://www.encodeproject.org/files/ENCFF723WDT/@@download/ENCFF723WDT.bigBed GRCh38 released low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RAG bam alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000RAT 860268773 Richard Myers, HAIB 74e68a650822e88a0f98ba2075c77e47 https://www.encodeproject.org/files/ENCFF000RAG/@@download/ENCFF000RAG.bam hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RAH bam alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000RAW 1303017375 Richard Myers, HAIB 72651a3100e95c30973a349e48f4e658 https://www.encodeproject.org/files/ENCFF000RAH/@@download/ENCFF000RAH.bam hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RAI bigBed broadPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UPT 675700 Richard Myers, HAIB b6bca9745587d7bb37aad664d830732d https://www.encodeproject.org/files/ENCFF000RAI/@@download/ENCFF000RAI.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RAJ bigBed broadPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UPU 327899 Richard Myers, HAIB d8505ca40ead79915855b2d7429154bd https://www.encodeproject.org/files/ENCFF000RAJ/@@download/ENCFF000RAJ.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RAM bigWig raw signal ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 24111286 Richard Myers, HAIB 8487ed20bac1a25e7a0f12258f582074 https://www.encodeproject.org/files/ENCFF000RAM/@@download/ENCFF000RAM.bigWig hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RAN bigWig raw signal ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 15544156 Richard Myers, HAIB 8106458065690879232ed5fe16da5312 https://www.encodeproject.org/files/ENCFF000RAN/@@download/ENCFF000RAN.bigWig hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF000RAT fastq reads ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 821196319 Richard Myers, HAIB 980432fe5e9cb3b7cf776b708627005b https://www.encodeproject.org/files/ENCFF000RAT/@@download/ENCFF000RAT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RCB/ released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000RAW fastq reads ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1315913702 Richard Myers, HAIB 8e3e0f849840113c562016b492abf600 https://www.encodeproject.org/files/ENCFF000RAW/@@download/ENCFF000RAW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000RCB/ released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF001UPT bed broadPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 1 381032 Richard Myers, HAIB 78357e2915ccbc95ee08327020326d34 https://www.encodeproject.org/files/ENCFF001UPT/@@download/ENCFF001UPT.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF001UPU bed broadPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 1 195903 Richard Myers, HAIB 88846273b402afee37808dac50767649 https://www.encodeproject.org/files/ENCFF001UPU/@@download/ENCFF001UPU.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF002CNK bed narrowPeak optimal idr thresholded peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 250627 ENCODE Consortium Analysis Working Group fd4b8b1a0e1a4b5dad3863cfb09546b7 https://www.encodeproject.org/files/ENCFF002CNK/@@download/ENCFF002CNK.bed.gz hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking missing derived_from, biological replicates with identical biosample ENCFF818TQV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE ENCFF002CNK 530204 ENCODE Consortium d9e3f67d72c9f4384e59f4e334ebc12b https://www.encodeproject.org/files/ENCFF818TQV/@@download/ENCFF818TQV.bigBed hg19 archived moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF959UTG bam unfiltered alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RAT, ENCFF643CGH 964475763 ENCODE Processing Pipeline 5f93fc5408e041159c9465a9fc588e5a https://www.encodeproject.org/files/ENCFF959UTG/@@download/ENCFF959UTG.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF247ZIP bam alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RAT, ENCFF643CGH 484647113 ENCODE Processing Pipeline 4872d18fcbbce241e2f0184b659fead7 https://www.encodeproject.org/files/ENCFF247ZIP/@@download/ENCFF247ZIP.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF968TGT bam unfiltered alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RAW, ENCFF643CGH 1414897400 ENCODE Processing Pipeline 4bbcdad3d022205740722a8175e1213b https://www.encodeproject.org/files/ENCFF968TGT/@@download/ENCFF968TGT.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF705JKT bam alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RAW, ENCFF643CGH 723512027 ENCODE Processing Pipeline de0bdba2a70055ce27567726ac1f5144 https://www.encodeproject.org/files/ENCFF705JKT/@@download/ENCFF705JKT.bam GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF463UJR bam alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RAT, ENCFF807MUK 484930120 ENCODE Processing Pipeline 1854e1fd83708304d7fb17ae170b2d48 https://www.encodeproject.org/files/ENCFF463UJR/@@download/ENCFF463UJR.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF810TRR bam unfiltered alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000RAT, ENCFF807MUK 962594846 ENCODE Processing Pipeline 5aac42263cf3dd62d2c871ac7e3d92e3 https://www.encodeproject.org/files/ENCFF810TRR/@@download/ENCFF810TRR.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF843JEA bam unfiltered alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RAW, ENCFF807MUK 1410608208 ENCODE Processing Pipeline adac1a1285e0397ab7875dceb43de8b4 https://www.encodeproject.org/files/ENCFF843JEA/@@download/ENCFF843JEA.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF541WKG bam alignments ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000RAW, ENCFF807MUK 723765570 ENCODE Processing Pipeline 634ac0e06bf8884c16ee83e6caa410b0 https://www.encodeproject.org/files/ENCFF541WKG/@@download/ENCFF541WKG.bam hg19 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF168OUK bigWig signal p-value ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF118ENS, ENCFF247ZIP 385990231 ENCODE Processing Pipeline e2001d82e8e5a3d179a53fe130c930bb https://www.encodeproject.org/files/ENCFF168OUK/@@download/ENCFF168OUK.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF859QNW bigWig signal p-value ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF705JKT 467993852 ENCODE Processing Pipeline 3e5e77abdcebca01fa69074b964b022f https://www.encodeproject.org/files/ENCFF859QNW/@@download/ENCFF859QNW.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF038MYV bigWig fold change over control ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF118ENS, ENCFF247ZIP 255349109 ENCODE Processing Pipeline 812818fc0ec5ccdd59d52f7dd4de46a4 https://www.encodeproject.org/files/ENCFF038MYV/@@download/ENCFF038MYV.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF892HXM bigWig signal p-value ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF118ENS, ENCFF247ZIP, ENCFF705JKT 596091202 ENCODE Processing Pipeline 17f4450374fd8a083b36d0582c835b4a https://www.encodeproject.org/files/ENCFF892HXM/@@download/ENCFF892HXM.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF615HGB bigWig fold change over control ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF705JKT 351304338 ENCODE Processing Pipeline 4573d0d73c2dfba674e56357a489aada https://www.encodeproject.org/files/ENCFF615HGB/@@download/ENCFF615HGB.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF689BDC bigWig fold change over control ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF118ENS, ENCFF247ZIP, ENCFF705JKT 547391149 ENCODE Processing Pipeline 9ae2f162da716a8225a5de5106136905 https://www.encodeproject.org/files/ENCFF689BDC/@@download/ENCFF689BDC.bigWig GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF056ITA bed narrowPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF118ENS, ENCFF247ZIP, ENCFF705JKT 5539909 ENCODE Processing Pipeline 4c47069b4cb5c80a3cf32d1233e5f945 https://www.encodeproject.org/files/ENCFF056ITA/@@download/ENCFF056ITA.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF709QNF bed narrowPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF118ENS, ENCFF247ZIP 4912173 ENCODE Processing Pipeline 0f181963f76dc555f761cf7729fce993 https://www.encodeproject.org/files/ENCFF709QNF/@@download/ENCFF709QNF.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF743ETN bed narrowPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF118ENS, ENCFF705JKT 4534635 ENCODE Processing Pipeline 8a7e06364bed3658ea3956e0d96158f8 https://www.encodeproject.org/files/ENCFF743ETN/@@download/ENCFF743ETN.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF492ZIJ bigBed narrowPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF056ITA 11213715 ENCODE Processing Pipeline fca8437234bedf3a5b22e49f6568cd30 https://www.encodeproject.org/files/ENCFF492ZIJ/@@download/ENCFF492ZIJ.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF111BVK bigBed narrowPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 2 ENCFF743ETN 10789291 ENCODE Processing Pipeline fb4d7dcb4f5727140855626fcde36ef8 https://www.encodeproject.org/files/ENCFF111BVK/@@download/ENCFF111BVK.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF642XNV bigBed narrowPeak peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1 ENCFF709QNF 10687368 ENCODE Processing Pipeline c2648ccecddc84b031e44c76ff18f93e https://www.encodeproject.org/files/ENCFF642XNV/@@download/ENCFF642XNV.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF256ECY bed narrowPeak conservative idr thresholded peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF056ITA, ENCFF419RSJ, ENCFF709QNF, ENCFF743ETN 247085 ENCODE Processing Pipeline 1c62fa6ec60a54468b00fa2699aabe49 https://www.encodeproject.org/files/ENCFF256ECY/@@download/ENCFF256ECY.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF540FXB bed narrowPeak optimal idr thresholded peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF056ITA, ENCFF419RSJ, ENCFF709QNF, ENCFF743ETN 296524 ENCODE Processing Pipeline bab85df715787bd56fdc6fa68444c8d1 https://www.encodeproject.org/files/ENCFF540FXB/@@download/ENCFF540FXB.bed.gz GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF281WIN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF256ECY 520734 ENCODE Processing Pipeline eb379a8136c8add134ee09dab12540e3 https://www.encodeproject.org/files/ENCFF281WIN/@@download/ENCFF281WIN.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF542DTM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BOZ ChIP-seq EFO:0003072 SK-N-SH immortalized cell line child female 4 year Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF540FXB 594730 ENCODE Processing Pipeline fb49144b30dbf3920e35c65ef4307955 https://www.encodeproject.org/files/ENCFF542DTM/@@download/ENCFF542DTM.bigBed GRCh38 released moderate library complexity, low read length, low read depth, mild to moderate bottlenecking biological replicates with identical biosample ENCFF000MYQ bam alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000MZG 1748303044 Richard Myers, HAIB bc1f2cfb2da0ba123b789888ea0efbe7 https://www.encodeproject.org/files/ENCFF000MYQ/@@download/ENCFF000MYQ.bam hg19 archived low read length biological replicates with identical biosample ENCFF000MYS bigBed broadPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001TRZ 192157 Richard Myers, HAIB f98dc62efcabd4684d41affe1c01178e https://www.encodeproject.org/files/ENCFF000MYS/@@download/ENCFF000MYS.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000MYT bigBed broadPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001TSA 423232 Richard Myers, HAIB 0d0b8145bd071f96a949b73906c14498 https://www.encodeproject.org/files/ENCFF000MYT/@@download/ENCFF000MYT.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF000MYU bam alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000MZF 1573241484 Richard Myers, HAIB 69d7f276043cd52797ceb79ab2e5732a https://www.encodeproject.org/files/ENCFF000MYU/@@download/ENCFF000MYU.bam hg19 archived low read length biological replicates with identical biosample ENCFF000MYV bigWig raw signal ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 1 9113837 Richard Myers, HAIB fb746992514ab036786199c3919a2d49 https://www.encodeproject.org/files/ENCFF000MYV/@@download/ENCFF000MYV.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000MYW bigWig raw signal ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 1 17017726 Richard Myers, HAIB 329b1b4577f5981c4f9a3b05ff65b4c0 https://www.encodeproject.org/files/ENCFF000MYW/@@download/ENCFF000MYW.bigWig hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF000MZF fastq reads ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1561831434 Richard Myers, HAIB a3c7b4336ffd9374a1501e9d7f2f0711 https://www.encodeproject.org/files/ENCFF000MZF/@@download/ENCFF000MZF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF000MZG fastq reads ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1706037609 Richard Myers, HAIB b5f9875ebb69fafa5c78030439d14408 https://www.encodeproject.org/files/ENCFF000MZG/@@download/ENCFF000MZG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000NGH/ released low read length biological replicates with identical biosample ENCFF001TRZ bed broadPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 1 93420 Richard Myers, HAIB 46d636179bd6f4281794c63dfcb4349a https://www.encodeproject.org/files/ENCFF001TRZ/@@download/ENCFF001TRZ.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF001TSA bed broadPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 1 232292 Richard Myers, HAIB afdc2ade2b856c91a334ff5cc8cd4fa3 https://www.encodeproject.org/files/ENCFF001TSA/@@download/ENCFF001TSA.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF002CFL bed narrowPeak optimal idr thresholded peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 213909 ENCODE Consortium Analysis Working Group 6a7358ad55f86356616458ebbb57edf0 https://www.encodeproject.org/files/ENCFF002CFL/@@download/ENCFF002CFL.bed.gz hg19 archived low read length missing derived_from, biological replicates with identical biosample ENCFF777XTA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE ENCFF002CFL 580203 ENCODE Consortium 3a6193650b3edfe573240965d596d558 https://www.encodeproject.org/files/ENCFF777XTA/@@download/ENCFF777XTA.bigBed hg19 archived low read length biological replicates with identical biosample ENCFF264UCL bam alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZF, ENCFF643CGH 1074831096 ENCODE Processing Pipeline 6ed004206c5ed62214318acbde6f27aa https://www.encodeproject.org/files/ENCFF264UCL/@@download/ENCFF264UCL.bam GRCh38 released low read length biological replicates with identical biosample ENCFF878CGJ bam unfiltered alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZF, ENCFF643CGH 1709781690 ENCODE Processing Pipeline 2f7b576ff2dcfef652dbb29ff358b04a https://www.encodeproject.org/files/ENCFF878CGJ/@@download/ENCFF878CGJ.bam GRCh38 released low read length biological replicates with identical biosample ENCFF164SSQ bam unfiltered alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZG, ENCFF643CGH 1914449244 ENCODE Processing Pipeline ee3aef794c5ee699f35c6ef0b16912f4 https://www.encodeproject.org/files/ENCFF164SSQ/@@download/ENCFF164SSQ.bam GRCh38 released low read length biological replicates with identical biosample ENCFF204HXG bam alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZG, ENCFF643CGH 1214416425 ENCODE Processing Pipeline 00719feb2c4be53716f8bf9b44d77965 https://www.encodeproject.org/files/ENCFF204HXG/@@download/ENCFF204HXG.bam GRCh38 released low read length biological replicates with identical biosample ENCFF498ADD bam alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZF, ENCFF807MUK 1075035759 ENCODE Processing Pipeline 2e6f8c68742feddd035fd8032e2ec375 https://www.encodeproject.org/files/ENCFF498ADD/@@download/ENCFF498ADD.bam hg19 released low read length biological replicates with identical biosample ENCFF557QAM bam unfiltered alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000MZF, ENCFF807MUK 1705457678 ENCODE Processing Pipeline 5ec7c875689b8fb76bcb40071ed9a689 https://www.encodeproject.org/files/ENCFF557QAM/@@download/ENCFF557QAM.bam hg19 released low read length biological replicates with identical biosample ENCFF036XOQ bam unfiltered alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZG, ENCFF807MUK 1905196873 ENCODE Processing Pipeline 23fae9408a3c88f092b4c3e729469a6d https://www.encodeproject.org/files/ENCFF036XOQ/@@download/ENCFF036XOQ.bam hg19 released low read length biological replicates with identical biosample ENCFF860JJU bam alignments ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000MZG, ENCFF807MUK 1214621465 ENCODE Processing Pipeline bd3e5d6e0fb855d677270e3bf8a5641d https://www.encodeproject.org/files/ENCFF860JJU/@@download/ENCFF860JJU.bam hg19 released low read length biological replicates with identical biosample ENCFF620SCO bigWig signal p-value ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF204HXG, ENCFF656HEF 622481251 ENCODE Processing Pipeline 0c10164787731ef7486492b17ab0a8eb https://www.encodeproject.org/files/ENCFF620SCO/@@download/ENCFF620SCO.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF114VJC bigWig signal p-value ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF264UCL, ENCFF656HEF 696912484 ENCODE Processing Pipeline 1a57e024b7a1ec5d3c88402607a80f16 https://www.encodeproject.org/files/ENCFF114VJC/@@download/ENCFF114VJC.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF603RBP bigWig signal p-value ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF204HXG, ENCFF264UCL, ENCFF656HEF 838381120 ENCODE Processing Pipeline 332f7fcc6531abbfef8e9bfadd5d2aba https://www.encodeproject.org/files/ENCFF603RBP/@@download/ENCFF603RBP.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF956HAA bigWig fold change over control ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF204HXG, ENCFF656HEF 606775309 ENCODE Processing Pipeline ac441c6897349b3d14dda19c70de6ff4 https://www.encodeproject.org/files/ENCFF956HAA/@@download/ENCFF956HAA.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF032LDM bigWig fold change over control ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF264UCL, ENCFF656HEF 564572635 ENCODE Processing Pipeline e88eba04c23d279043d1e33c8e83b64b https://www.encodeproject.org/files/ENCFF032LDM/@@download/ENCFF032LDM.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF527SIP bigWig fold change over control ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF204HXG, ENCFF264UCL, ENCFF656HEF 965437597 ENCODE Processing Pipeline 0c45cad4ca2ad69c865012d432964fed https://www.encodeproject.org/files/ENCFF527SIP/@@download/ENCFF527SIP.bigWig GRCh38 released low read length biological replicates with identical biosample ENCFF213GND bigBed narrowPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF107DUP 13533245 ENCODE Processing Pipeline af67ce7d7a8032a17e3a17d82a658aa0 https://www.encodeproject.org/files/ENCFF213GND/@@download/ENCFF213GND.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF300PRA bigBed narrowPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF815HRV 7422356 ENCODE Processing Pipeline edc2bff6e1e865d83da1e3c31b5cf4c8 https://www.encodeproject.org/files/ENCFF300PRA/@@download/ENCFF300PRA.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF815HRV bed narrowPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF204HXG, ENCFF264UCL, ENCFF656HEF 3703843 ENCODE Processing Pipeline dfbaa96515a999dce1bf6e26128266a2 https://www.encodeproject.org/files/ENCFF815HRV/@@download/ENCFF815HRV.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF350DZM bigBed narrowPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF377XVZ 13133024 ENCODE Processing Pipeline be3d0e646e953339d083a5f6252d463f https://www.encodeproject.org/files/ENCFF350DZM/@@download/ENCFF350DZM.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF107DUP bed narrowPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF204HXG, ENCFF656HEF 5609101 ENCODE Processing Pipeline 657d1e843ac6a7204f6283778a644d5b https://www.encodeproject.org/files/ENCFF107DUP/@@download/ENCFF107DUP.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF912QRU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF935ZUW 419100 ENCODE Processing Pipeline 7c945e18ac86b79ddb735cb571a2fea6 https://www.encodeproject.org/files/ENCFF912QRU/@@download/ENCFF912QRU.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF377XVZ bed narrowPeak peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF264UCL, ENCFF656HEF 6238779 ENCODE Processing Pipeline 682288328f425f63c7211fdcc7f3dd74 https://www.encodeproject.org/files/ENCFF377XVZ/@@download/ENCFF377XVZ.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF457YJH bed narrowPeak conservative idr thresholded peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF107DUP, ENCFF377XVZ, ENCFF419RSJ, ENCFF815HRV 168777 ENCODE Processing Pipeline 19195a4e6ddb0474743b5f00cae25a47 https://www.encodeproject.org/files/ENCFF457YJH/@@download/ENCFF457YJH.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF863CLM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF457YJH 368218 ENCODE Processing Pipeline bd9dc2778e40d4d71a24f98be231d398 https://www.encodeproject.org/files/ENCFF863CLM/@@download/ENCFF863CLM.bigBed GRCh38 released low read length biological replicates with identical biosample ENCFF935ZUW bed narrowPeak optimal idr thresholded peaks ENCSR000BPT ChIP-seq EFO:0001086 A549 immortalized cell line adult male 58 year Homo sapiens ethanol ELF1-human ENCAB000AGA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF107DUP, ENCFF377XVZ, ENCFF419RSJ, ENCFF815HRV 204725 ENCODE Processing Pipeline 5c78e6a58cb6fc5d92b741e2064dc371 https://www.encodeproject.org/files/ENCFF935ZUW/@@download/ENCFF935ZUW.bed.gz GRCh38 released low read length biological replicates with identical biosample ENCFF204UTF fastq reads ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1236585185 Richard Myers, HAIB a62a426053096850e2f387b9ddf416f0 SRA:SRR5339549 https://www.encodeproject.org/files/ENCFF204UTF/@@download/ENCFF204UTF.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF380ESC fastq reads ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2695086115 Richard Myers, HAIB 105a0bbc183708f93474eb0a019cda1a SRA:SRR5339548 https://www.encodeproject.org/files/ENCFF380ESC/@@download/ENCFF380ESC.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, mild to moderate bottlenecking ENCFF666VJD bam unfiltered alignments ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF204UTF, ENCFF643CGH 1428072746 ENCODE Processing Pipeline c3d805749af1fc221091b5d7115b9f37 https://www.encodeproject.org/files/ENCFF666VJD/@@download/ENCFF666VJD.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF741PDQ bam unfiltered alignments ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF204UTF, ENCFF807MUK 1426578890 ENCODE Processing Pipeline e5c5b030b904de455adb6f4ed4449ec5 https://www.encodeproject.org/files/ENCFF741PDQ/@@download/ENCFF741PDQ.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF833YVO bam unfiltered alignments ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF380ESC, ENCFF643CGH 3057561487 ENCODE Processing Pipeline 010741bf74864e6f93311f61db307332 https://www.encodeproject.org/files/ENCFF833YVO/@@download/ENCFF833YVO.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF919VWI bam alignments ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF204UTF, ENCFF643CGH 1108223924 ENCODE Processing Pipeline 164175baa13db5fca8ebbdce17386150 https://www.encodeproject.org/files/ENCFF919VWI/@@download/ENCFF919VWI.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF641GJH bam unfiltered alignments ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF380ESC, ENCFF807MUK 3049170369 ENCODE Processing Pipeline 29e84c465d05751da8497ee7fba8f745 https://www.encodeproject.org/files/ENCFF641GJH/@@download/ENCFF641GJH.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF484TNT bam alignments ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF204UTF, ENCFF807MUK 1108078524 ENCODE Processing Pipeline 4398aeaea044b4c6f105de8d76edaec7 https://www.encodeproject.org/files/ENCFF484TNT/@@download/ENCFF484TNT.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF230UKQ bam alignments ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF380ESC, ENCFF643CGH 1907169148 ENCODE Processing Pipeline 84e80678347d0cb1368cb14637351eef https://www.encodeproject.org/files/ENCFF230UKQ/@@download/ENCFF230UKQ.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF361EAX bam alignments ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF380ESC, ENCFF807MUK 1905614730 ENCODE Processing Pipeline 7394f3f50c62a57f98701ff75966d95b https://www.encodeproject.org/files/ENCFF361EAX/@@download/ENCFF361EAX.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF278VAU bigWig signal p-value ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF919VWI 479839725 ENCODE Processing Pipeline c4b9fc307b4b70bcb7b5d4ad95f736d0 https://www.encodeproject.org/files/ENCFF278VAU/@@download/ENCFF278VAU.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF036XJT bigWig signal p-value ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF230UKQ, ENCFF919VWI 680247465 ENCODE Processing Pipeline 4a35366a9627de5452663453f4a6176e https://www.encodeproject.org/files/ENCFF036XJT/@@download/ENCFF036XJT.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF196HQV bigWig signal p-value ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF230UKQ 693544154 ENCODE Processing Pipeline 7d69471d5f9294d1e54954739175ac34 https://www.encodeproject.org/files/ENCFF196HQV/@@download/ENCFF196HQV.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF587XTM bigWig fold change over control ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF919VWI 425731186 ENCODE Processing Pipeline 96c04040678333f2a0107fba4dd8bd70 https://www.encodeproject.org/files/ENCFF587XTM/@@download/ENCFF587XTM.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF309ZRK bigWig fold change over control ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF230UKQ, ENCFF919VWI 942982710 ENCODE Processing Pipeline 07538c970e3ed41ef9661786dabdd348 https://www.encodeproject.org/files/ENCFF309ZRK/@@download/ENCFF309ZRK.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF863ZRE bigWig fold change over control ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF230UKQ 683352527 ENCODE Processing Pipeline a88667b73d1d6b060b6dcb2fdc439277 https://www.encodeproject.org/files/ENCFF863ZRE/@@download/ENCFF863ZRE.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF069IJL bed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF919VWI 6557768 ENCODE Processing Pipeline 9b40dd34ff15054638800e7bffdc645f https://www.encodeproject.org/files/ENCFF069IJL/@@download/ENCFF069IJL.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF162JPL bigBed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF069IJL 12603350 ENCODE Processing Pipeline 9e1bf3097a9543f1aa36159c2c3af5a8 https://www.encodeproject.org/files/ENCFF162JPL/@@download/ENCFF162JPL.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF097RQZ bed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF230UKQ, ENCFF919VWI 7119888 ENCODE Processing Pipeline 9cecd6eb95b8265b92b3fb4c6e5611eb https://www.encodeproject.org/files/ENCFF097RQZ/@@download/ENCFF097RQZ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF288LDH bed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF230UKQ 6437554 ENCODE Processing Pipeline d5a1322813c0eb3d58df678181463954 https://www.encodeproject.org/files/ENCFF288LDH/@@download/ENCFF288LDH.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF379KTR bigBed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF288LDH 13032496 ENCODE Processing Pipeline 8fac253c2e12c3613e4060b31b81ef76 https://www.encodeproject.org/files/ENCFF379KTR/@@download/ENCFF379KTR.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF010PMS bigBed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF097RQZ 12710121 ENCODE Processing Pipeline 12d1446a1bd3ec0d519ad38691ba3343 https://www.encodeproject.org/files/ENCFF010PMS/@@download/ENCFF010PMS.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF701OWK bed narrowPeak conservative idr thresholded peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF069IJL, ENCFF097RQZ, ENCFF288LDH, ENCFF419RSJ 284765 ENCODE Processing Pipeline be348525c34b43f016ea3b36e4a68d4c https://www.encodeproject.org/files/ENCFF701OWK/@@download/ENCFF701OWK.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF190PJP bigBed narrowPeak conservative idr thresholded peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF701OWK 593864 ENCODE Processing Pipeline 0bcc011aee2d3d762429c52d9ed144c1 https://www.encodeproject.org/files/ENCFF190PJP/@@download/ENCFF190PJP.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF985DMC bed narrowPeak optimal idr thresholded peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF069IJL, ENCFF097RQZ, ENCFF288LDH, ENCFF419RSJ 321854 ENCODE Processing Pipeline 886a3da7c7136ff18010c28bb64cbe76 https://www.encodeproject.org/files/ENCFF985DMC/@@download/ENCFF985DMC.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF734VWO bigBed narrowPeak optimal idr thresholded peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF985DMC 652424 ENCODE Processing Pipeline 1c8d9a928c6744d0d95168691e2c905b https://www.encodeproject.org/files/ENCFF734VWO/@@download/ENCFF734VWO.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF463LIP bigWig signal p-value ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF484TNT 1193012286 ENCODE Processing Pipeline d78bbb0e1cde8952d74a4c98cfef33b0 https://www.encodeproject.org/files/ENCFF463LIP/@@download/ENCFF463LIP.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF059QBN bigWig signal p-value ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF361EAX 1325666130 ENCODE Processing Pipeline d7095b75102916b38face800ba97b2f8 https://www.encodeproject.org/files/ENCFF059QBN/@@download/ENCFF059QBN.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF381UTK bigWig signal p-value ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF361EAX, ENCFF484TNT 1468712311 ENCODE Processing Pipeline 0217969ff6468b5fc9169d852f939f4e https://www.encodeproject.org/files/ENCFF381UTK/@@download/ENCFF381UTK.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF426VJQ bigWig fold change over control ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF484TNT 762750436 ENCODE Processing Pipeline 697f23fb57eed55ddca2ff108377e283 https://www.encodeproject.org/files/ENCFF426VJQ/@@download/ENCFF426VJQ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF192WMG bigWig fold change over control ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF361EAX 1224591433 ENCODE Processing Pipeline 06183362be67ba3a7c6aad43b8035988 https://www.encodeproject.org/files/ENCFF192WMG/@@download/ENCFF192WMG.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF897JCJ bigWig fold change over control ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF361EAX, ENCFF484TNT 1486917319 ENCODE Processing Pipeline e4af5fed511b02c1853097b11dc7f104 https://www.encodeproject.org/files/ENCFF897JCJ/@@download/ENCFF897JCJ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF545KPN bed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF361EAX 7072656 ENCODE Processing Pipeline 2baef025f9d76209d7680d63137d7918 https://www.encodeproject.org/files/ENCFF545KPN/@@download/ENCFF545KPN.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF978QAA bed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF484TNT 6955552 ENCODE Processing Pipeline 59c24a48ed7ffaf7d0b794ac374aad33 https://www.encodeproject.org/files/ENCFF978QAA/@@download/ENCFF978QAA.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF590MES bed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF361EAX, ENCFF484TNT 7112325 ENCODE Processing Pipeline 167e5825e2698135ca8db8e6b2c3025a https://www.encodeproject.org/files/ENCFF590MES/@@download/ENCFF590MES.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF055WBR bigBed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF978QAA 12541759 ENCODE Processing Pipeline 39aee13b1a3cd6cd7a282718b9304e24 https://www.encodeproject.org/files/ENCFF055WBR/@@download/ENCFF055WBR.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF118RVY bigBed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF545KPN 12995010 ENCODE Processing Pipeline 9ca7d51a52a52a5064ed29fd7c29f1a0 https://www.encodeproject.org/files/ENCFF118RVY/@@download/ENCFF118RVY.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF632XYL bigBed narrowPeak peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF590MES 12574546 ENCODE Processing Pipeline 528bf7f72a44162564cca87cb7904ecd https://www.encodeproject.org/files/ENCFF632XYL/@@download/ENCFF632XYL.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF486ZPT bed narrowPeak conservative idr thresholded peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF545KPN, ENCFF590MES, ENCFF978QAA 273465 ENCODE Processing Pipeline 5ff799eb111847cbe275f725604e70d7 https://www.encodeproject.org/files/ENCFF486ZPT/@@download/ENCFF486ZPT.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF212VYK bigBed narrowPeak conservative idr thresholded peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF486ZPT 613522 ENCODE Processing Pipeline fb7af2b6312a03962d4a26a9e1ddde9d https://www.encodeproject.org/files/ENCFF212VYK/@@download/ENCFF212VYK.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF428NSH bed narrowPeak optimal idr thresholded peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF545KPN, ENCFF590MES, ENCFF978QAA 303101 ENCODE Processing Pipeline 02b233f3de90b5ec0e421cb78c17788f https://www.encodeproject.org/files/ENCFF428NSH/@@download/ENCFF428NSH.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF905CAY bigBed narrowPeak optimal idr thresholded peaks ENCSR909GJR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MXD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF428NSH 660568 ENCODE Processing Pipeline 2928bd7b4dbfc7ac3c795a0f182a2c6d https://www.encodeproject.org/files/ENCFF905CAY/@@download/ENCFF905CAY.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking ENCFF782RSZ fastq reads ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1440172185 Richard Myers, HAIB c0188dacbb0d2f6012f9a805c463900c SRA:SRR5331304 https://www.encodeproject.org/files/ENCFF782RSZ/@@download/ENCFF782RSZ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF460NRJ fastq reads ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2495054724 Richard Myers, HAIB 567edef1e5808ec2c955b681283bdc22 SRA:SRR5331303 https://www.encodeproject.org/files/ENCFF460NRJ/@@download/ENCFF460NRJ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF280VGH bam unfiltered alignments ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF782RSZ 1680644825 ENCODE Processing Pipeline 81606c9bbb305380df546c773dc22ff2 https://www.encodeproject.org/files/ENCFF280VGH/@@download/ENCFF280VGH.bam GRCh38 released antibody characterized with exemption ENCFF032LGX bam unfiltered alignments ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF782RSZ, ENCFF807MUK 1676734199 ENCODE Processing Pipeline 91340f75f198901c24293112d6b260fb https://www.encodeproject.org/files/ENCFF032LGX/@@download/ENCFF032LGX.bam hg19 released antibody characterized with exemption ENCFF380VMK bam unfiltered alignments ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF460NRJ, ENCFF643CGH 2788374791 ENCODE Processing Pipeline ee774a93a0216fe4f8fc7677a257151a https://www.encodeproject.org/files/ENCFF380VMK/@@download/ENCFF380VMK.bam GRCh38 released antibody characterized with exemption ENCFF246NWJ bam alignments ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF782RSZ 1240459382 ENCODE Processing Pipeline ba61233c4964bd11d5a2b777c802df62 https://www.encodeproject.org/files/ENCFF246NWJ/@@download/ENCFF246NWJ.bam GRCh38 released antibody characterized with exemption ENCFF305NTO bam unfiltered alignments ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF460NRJ, ENCFF807MUK 2782436968 ENCODE Processing Pipeline 4ca4ea5da827c8133a774561a3e8748f https://www.encodeproject.org/files/ENCFF305NTO/@@download/ENCFF305NTO.bam hg19 released antibody characterized with exemption ENCFF697CIN bam alignments ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF782RSZ, ENCFF807MUK 1239739508 ENCODE Processing Pipeline 9a89a3c0fbb1e4118ef234ad4f1f9892 https://www.encodeproject.org/files/ENCFF697CIN/@@download/ENCFF697CIN.bam hg19 released antibody characterized with exemption ENCFF999YSD bam alignments ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF460NRJ, ENCFF643CGH 1978387844 ENCODE Processing Pipeline dfbb339b221bb10bbb6afaaf82338dc8 https://www.encodeproject.org/files/ENCFF999YSD/@@download/ENCFF999YSD.bam GRCh38 released antibody characterized with exemption ENCFF829CNY bam alignments ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF460NRJ, ENCFF807MUK 1977215143 ENCODE Processing Pipeline 391d2eead985a48fd7383f370cea93aa https://www.encodeproject.org/files/ENCFF829CNY/@@download/ENCFF829CNY.bam hg19 released antibody characterized with exemption ENCFF147UNI bigWig signal p-value ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF999YSD 661321293 ENCODE Processing Pipeline c71e587522316f912761ee270ff8913a https://www.encodeproject.org/files/ENCFF147UNI/@@download/ENCFF147UNI.bigWig GRCh38 released antibody characterized with exemption ENCFF894IQI bigWig signal p-value ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF246NWJ 518899670 ENCODE Processing Pipeline 55ca1d49eaf9573f2421409c41ddc386 https://www.encodeproject.org/files/ENCFF894IQI/@@download/ENCFF894IQI.bigWig GRCh38 released antibody characterized with exemption ENCFF530UGB bigWig signal p-value ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF246NWJ, ENCFF999YSD 631016718 ENCODE Processing Pipeline 689f240328aaa5f5f666364f110596fc https://www.encodeproject.org/files/ENCFF530UGB/@@download/ENCFF530UGB.bigWig GRCh38 released antibody characterized with exemption ENCFF854VYF bigWig fold change over control ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF999YSD 682708965 ENCODE Processing Pipeline 1ee8f9ef3a698d9334996048718ebbb9 https://www.encodeproject.org/files/ENCFF854VYF/@@download/ENCFF854VYF.bigWig GRCh38 released antibody characterized with exemption ENCFF672QFZ bigWig fold change over control ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF246NWJ 497149595 ENCODE Processing Pipeline 04f52f48710dff9b506827a2553fce7b https://www.encodeproject.org/files/ENCFF672QFZ/@@download/ENCFF672QFZ.bigWig GRCh38 released antibody characterized with exemption ENCFF559CVP bigWig fold change over control ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF246NWJ, ENCFF999YSD 975319828 ENCODE Processing Pipeline f20a2d5ede247d61d241d1dfed4da158 https://www.encodeproject.org/files/ENCFF559CVP/@@download/ENCFF559CVP.bigWig GRCh38 released antibody characterized with exemption ENCFF659DPA bed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF999YSD 6233291 ENCODE Processing Pipeline ff10f7e3762f5e557a916667b4dc0812 https://www.encodeproject.org/files/ENCFF659DPA/@@download/ENCFF659DPA.bed.gz GRCh38 released antibody characterized with exemption ENCFF093MVU bigBed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF659DPA 13318342 ENCODE Processing Pipeline 367b1193b078de1acab6e4f113846814 https://www.encodeproject.org/files/ENCFF093MVU/@@download/ENCFF093MVU.bigBed GRCh38 released antibody characterized with exemption ENCFF120CFE bed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF246NWJ 5432027 ENCODE Processing Pipeline 94b4c3dcdfe4a3857b331f00a9c2e00a https://www.encodeproject.org/files/ENCFF120CFE/@@download/ENCFF120CFE.bed.gz GRCh38 released antibody characterized with exemption ENCFF388FCL bed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF246NWJ, ENCFF999YSD 6538637 ENCODE Processing Pipeline 817b3976caa5c2ea3fc1065f261ada90 https://www.encodeproject.org/files/ENCFF388FCL/@@download/ENCFF388FCL.bed.gz GRCh38 released antibody characterized with exemption ENCFF629RRK bigBed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF120CFE 11033896 ENCODE Processing Pipeline 305ac6efaa9ccc26a798c5e29175896b https://www.encodeproject.org/files/ENCFF629RRK/@@download/ENCFF629RRK.bigBed GRCh38 released antibody characterized with exemption ENCFF344KII bigBed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF388FCL 13333759 ENCODE Processing Pipeline c3a5234d3cddbec099a0b7a77528ce19 https://www.encodeproject.org/files/ENCFF344KII/@@download/ENCFF344KII.bigBed GRCh38 released antibody characterized with exemption ENCFF045POT bigBed narrowPeak conservative idr thresholded peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF061FMV 1672645 ENCODE Processing Pipeline 26571fe537fce57212295a69fca03d25 https://www.encodeproject.org/files/ENCFF045POT/@@download/ENCFF045POT.bigBed GRCh38 released antibody characterized with exemption ENCFF061FMV bed narrowPeak conservative idr thresholded peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF120CFE, ENCFF388FCL, ENCFF419RSJ, ENCFF659DPA 837677 ENCODE Processing Pipeline d4f213a65552c269e80e43cd417be9a0 https://www.encodeproject.org/files/ENCFF061FMV/@@download/ENCFF061FMV.bed.gz GRCh38 released antibody characterized with exemption ENCFF874PIO bed narrowPeak optimal idr thresholded peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF120CFE, ENCFF388FCL, ENCFF419RSJ, ENCFF659DPA 937769 ENCODE Processing Pipeline e096d2f8aa353c4155dc45af0de569af https://www.encodeproject.org/files/ENCFF874PIO/@@download/ENCFF874PIO.bed.gz GRCh38 released antibody characterized with exemption ENCFF470YRW bigBed narrowPeak optimal idr thresholded peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF874PIO 1824138 ENCODE Processing Pipeline ccab25d728e2c162b713e8bebffe334b https://www.encodeproject.org/files/ENCFF470YRW/@@download/ENCFF470YRW.bigBed GRCh38 released antibody characterized with exemption ENCFF053XWU bigWig signal p-value ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF829CNY 1501552226 ENCODE Processing Pipeline 8a40336075b0dcf0319be6ba22394ecb https://www.encodeproject.org/files/ENCFF053XWU/@@download/ENCFF053XWU.bigWig hg19 released antibody characterized with exemption ENCFF926HGT bigWig signal p-value ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF697CIN 1194030301 ENCODE Processing Pipeline ce723e8fe854f4350a24732750db1f16 https://www.encodeproject.org/files/ENCFF926HGT/@@download/ENCFF926HGT.bigWig hg19 released antibody characterized with exemption ENCFF872CXX bigWig signal p-value ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF697CIN, ENCFF829CNY 1421047811 ENCODE Processing Pipeline 5ee593864bbd278395235bd5afe6d9ef https://www.encodeproject.org/files/ENCFF872CXX/@@download/ENCFF872CXX.bigWig hg19 released antibody characterized with exemption ENCFF273YZD bigWig fold change over control ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF829CNY 1222106268 ENCODE Processing Pipeline e66dc16a0e70f7428bcdbe2c5b4fb567 https://www.encodeproject.org/files/ENCFF273YZD/@@download/ENCFF273YZD.bigWig hg19 released antibody characterized with exemption ENCFF530IWU bigWig fold change over control ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF697CIN 940574088 ENCODE Processing Pipeline 4b465985a565f8b9c779793d8a56e849 https://www.encodeproject.org/files/ENCFF530IWU/@@download/ENCFF530IWU.bigWig hg19 released antibody characterized with exemption ENCFF087AEC bigWig fold change over control ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF697CIN, ENCFF829CNY 1613021520 ENCODE Processing Pipeline 3408b902dd42318828c0342dc2a8a264 https://www.encodeproject.org/files/ENCFF087AEC/@@download/ENCFF087AEC.bigWig hg19 released antibody characterized with exemption ENCFF611TJW bed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF829CNY 6477887 ENCODE Processing Pipeline 226b1cafb0c2332c9b930e60b801ff64 https://www.encodeproject.org/files/ENCFF611TJW/@@download/ENCFF611TJW.bed.gz hg19 released antibody characterized with exemption ENCFF448PNP bed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF697CIN, ENCFF829CNY 6818648 ENCODE Processing Pipeline a69c37146be3d80ceb9ab1e73d051f1d https://www.encodeproject.org/files/ENCFF448PNP/@@download/ENCFF448PNP.bed.gz hg19 released antibody characterized with exemption ENCFF381PAX bed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF697CIN 6106558 ENCODE Processing Pipeline 2cf7ff7e4acbf1baa005d9e485d38bcd https://www.encodeproject.org/files/ENCFF381PAX/@@download/ENCFF381PAX.bed.gz hg19 released antibody characterized with exemption ENCFF432QRU bigBed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF611TJW 13260670 ENCODE Processing Pipeline 63c3c90ce3e70a6d18eaa3ad2a304664 https://www.encodeproject.org/files/ENCFF432QRU/@@download/ENCFF432QRU.bigBed hg19 released antibody characterized with exemption ENCFF944TTI bigBed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF381PAX 11171075 ENCODE Processing Pipeline 3bac4f46e04707953308fd3c4394fc1e https://www.encodeproject.org/files/ENCFF944TTI/@@download/ENCFF944TTI.bigBed hg19 released antibody characterized with exemption ENCFF348VTV bigBed narrowPeak peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF448PNP 13517606 ENCODE Processing Pipeline 344cb9b8a45c59fc08e87b5ce6566d37 https://www.encodeproject.org/files/ENCFF348VTV/@@download/ENCFF348VTV.bigBed hg19 released antibody characterized with exemption ENCFF298YHP bigBed narrowPeak conservative idr thresholded peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF791WUN 1385027 ENCODE Processing Pipeline e56388bd740fc1e0c4ea9b48e446154d https://www.encodeproject.org/files/ENCFF298YHP/@@download/ENCFF298YHP.bigBed hg19 released antibody characterized with exemption ENCFF249CSQ bed narrowPeak optimal idr thresholded peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF381PAX, ENCFF448PNP, ENCFF611TJW 948825 ENCODE Processing Pipeline c7792cdddbdc1d4b7b0a620f2c98b5fa https://www.encodeproject.org/files/ENCFF249CSQ/@@download/ENCFF249CSQ.bed.gz hg19 released antibody characterized with exemption ENCFF791WUN bed narrowPeak conservative idr thresholded peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF381PAX, ENCFF448PNP, ENCFF611TJW 858037 ENCODE Processing Pipeline 5a81907dedae9d1b63b350c5e872c7e5 https://www.encodeproject.org/files/ENCFF791WUN/@@download/ENCFF791WUN.bed.gz hg19 released antibody characterized with exemption ENCFF185ICU bigBed narrowPeak optimal idr thresholded peaks ENCSR142IGM ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-CEBPA-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF249CSQ 1907883 ENCODE Processing Pipeline 1d8ddf8804cccd5252039c535980be7d https://www.encodeproject.org/files/ENCFF185ICU/@@download/ENCFF185ICU.bigBed hg19 released antibody characterized with exemption ENCFF438SXQ fastq reads ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1941571810 Richard Myers, HAIB 82ad42d812b24a3df4ae6e5e9bb9c021 SRA:SRR5339347 https://www.encodeproject.org/files/ENCFF438SXQ/@@download/ENCFF438SXQ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF633XUQ fastq reads ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2113592423 Richard Myers, HAIB a89a96dc818709c7f4cb933abda967d6 SRA:SRR5339348 https://www.encodeproject.org/files/ENCFF633XUQ/@@download/ENCFF633XUQ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF492RWD bam unfiltered alignments ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF438SXQ, ENCFF807MUK 2323287771 ENCODE Processing Pipeline 7d2ffa43e5f0887a1898f6c550ecee94 https://www.encodeproject.org/files/ENCFF492RWD/@@download/ENCFF492RWD.bam hg19 released antibody characterized with exemption ENCFF501HGC bam unfiltered alignments ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF633XUQ, ENCFF807MUK 2455602232 ENCODE Processing Pipeline f23fc2a9ba374b20b3f902cf01bc10b6 https://www.encodeproject.org/files/ENCFF501HGC/@@download/ENCFF501HGC.bam hg19 released antibody characterized with exemption ENCFF618MTC bam unfiltered alignments ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF633XUQ, ENCFF643CGH 2461086832 ENCODE Processing Pipeline d423013ad609adfd787ec103af5e2be2 https://www.encodeproject.org/files/ENCFF618MTC/@@download/ENCFF618MTC.bam GRCh38 released antibody characterized with exemption ENCFF652KLI bam unfiltered alignments ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF438SXQ, ENCFF643CGH 2328838475 ENCODE Processing Pipeline 342d8245b484a0be405a9b90744f9d28 https://www.encodeproject.org/files/ENCFF652KLI/@@download/ENCFF652KLI.bam GRCh38 released antibody characterized with exemption ENCFF371NEP bam alignments ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF438SXQ, ENCFF807MUK 1782617473 ENCODE Processing Pipeline 0ec581d657bf198969d586cebef5b291 https://www.encodeproject.org/files/ENCFF371NEP/@@download/ENCFF371NEP.bam hg19 released antibody characterized with exemption ENCFF868KHL bam alignments ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF633XUQ, ENCFF807MUK 1860643506 ENCODE Processing Pipeline 3a048bd6f003e04b9bdec6651ea6d1d6 https://www.encodeproject.org/files/ENCFF868KHL/@@download/ENCFF868KHL.bam hg19 released antibody characterized with exemption ENCFF448PRG bam alignments ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF633XUQ, ENCFF643CGH 1861597559 ENCODE Processing Pipeline cc788199cc108b785c18a8cc6611070c https://www.encodeproject.org/files/ENCFF448PRG/@@download/ENCFF448PRG.bam GRCh38 released antibody characterized with exemption ENCFF428YKP bam alignments ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF438SXQ, ENCFF643CGH 1783537266 ENCODE Processing Pipeline 6ed7d8bf795e34ac8acb8a607f9917fc https://www.encodeproject.org/files/ENCFF428YKP/@@download/ENCFF428YKP.bam GRCh38 released antibody characterized with exemption ENCFF293BOA bigWig signal p-value ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF448PRG 658700006 ENCODE Processing Pipeline a2791ac4d4d5c6b23de365ed27090a47 https://www.encodeproject.org/files/ENCFF293BOA/@@download/ENCFF293BOA.bigWig GRCh38 released antibody characterized with exemption ENCFF657QFN bigWig signal p-value ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF428YKP 636513293 ENCODE Processing Pipeline 19f1999627df13f8c468e5b0a46d08a0 https://www.encodeproject.org/files/ENCFF657QFN/@@download/ENCFF657QFN.bigWig GRCh38 released antibody characterized with exemption ENCFF970CRM bigWig signal p-value ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF428YKP, ENCFF448PRG 656378861 ENCODE Processing Pipeline ca66ef34342497a2aaae54ce9307755a https://www.encodeproject.org/files/ENCFF970CRM/@@download/ENCFF970CRM.bigWig GRCh38 released antibody characterized with exemption ENCFF913PII bigWig fold change over control ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF448PRG 607949262 ENCODE Processing Pipeline a1e551db3af8e57641458c4b28c582c0 https://www.encodeproject.org/files/ENCFF913PII/@@download/ENCFF913PII.bigWig GRCh38 released antibody characterized with exemption ENCFF903STU bigWig fold change over control ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF428YKP 609539432 ENCODE Processing Pipeline 3f7603a209985f9a3e93334ef723671e https://www.encodeproject.org/files/ENCFF903STU/@@download/ENCFF903STU.bigWig GRCh38 released antibody characterized with exemption ENCFF425LTP bigWig fold change over control ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF428YKP, ENCFF448PRG 1000121921 ENCODE Processing Pipeline 4d44077fddde2ebef291579d8a436d16 https://www.encodeproject.org/files/ENCFF425LTP/@@download/ENCFF425LTP.bigWig GRCh38 released antibody characterized with exemption ENCFF580IXX bed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF448PRG 6240765 ENCODE Processing Pipeline c383c2ee2f4020e0a544b53accea22f3 https://www.encodeproject.org/files/ENCFF580IXX/@@download/ENCFF580IXX.bed.gz GRCh38 released antibody characterized with exemption ENCFF938UCU bigBed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF580IXX 12949268 ENCODE Processing Pipeline 9864af3d96592726372207d916a452f9 https://www.encodeproject.org/files/ENCFF938UCU/@@download/ENCFF938UCU.bigBed GRCh38 released antibody characterized with exemption ENCFF614KIR bed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF428YKP, ENCFF448PRG 6722375 ENCODE Processing Pipeline 470809a1eaebb698074fdb41548a2cd8 https://www.encodeproject.org/files/ENCFF614KIR/@@download/ENCFF614KIR.bed.gz GRCh38 released antibody characterized with exemption ENCFF655FUP bed narrowPeak conservative idr thresholded peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF171YDU, ENCFF419RSJ, ENCFF580IXX, ENCFF614KIR 695691 ENCODE Processing Pipeline 65647343af687be647169ebe6e8810ee https://www.encodeproject.org/files/ENCFF655FUP/@@download/ENCFF655FUP.bed.gz GRCh38 released antibody characterized with exemption ENCFF250SHS bigBed narrowPeak optimal idr thresholded peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF541EKJ 1403509 ENCODE Processing Pipeline 16a1ea7da0de0d017889787d039ba81e https://www.encodeproject.org/files/ENCFF250SHS/@@download/ENCFF250SHS.bigBed GRCh38 released antibody characterized with exemption ENCFF171YDU bed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF428YKP 5962587 ENCODE Processing Pipeline 5e6bfab9cfa683bf686e958f344b0efa https://www.encodeproject.org/files/ENCFF171YDU/@@download/ENCFF171YDU.bed.gz GRCh38 released antibody characterized with exemption ENCFF304DVS bigBed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF171YDU 13188103 ENCODE Processing Pipeline d3c7a9a36e1275804d39df12cc1d6a23 https://www.encodeproject.org/files/ENCFF304DVS/@@download/ENCFF304DVS.bigBed GRCh38 released antibody characterized with exemption ENCFF745YKX bigBed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF614KIR 13022712 ENCODE Processing Pipeline d5ae6aed540d0481862842093c5da41b https://www.encodeproject.org/files/ENCFF745YKX/@@download/ENCFF745YKX.bigBed GRCh38 released antibody characterized with exemption ENCFF864CWW bigBed narrowPeak conservative idr thresholded peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF655FUP 1325528 ENCODE Processing Pipeline d1579bf68bc192fa71b4b162244fe519 https://www.encodeproject.org/files/ENCFF864CWW/@@download/ENCFF864CWW.bigBed GRCh38 released antibody characterized with exemption ENCFF541EKJ bed narrowPeak optimal idr thresholded peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF171YDU, ENCFF419RSJ, ENCFF580IXX, ENCFF614KIR 748242 ENCODE Processing Pipeline 74eb7f75d548b09f002fb61e4c2e5624 https://www.encodeproject.org/files/ENCFF541EKJ/@@download/ENCFF541EKJ.bed.gz GRCh38 released antibody characterized with exemption ENCFF311III bigWig signal p-value ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF868KHL 1311272997 ENCODE Processing Pipeline 02ad0fefc61a6c2c8c52d37ed060a992 https://www.encodeproject.org/files/ENCFF311III/@@download/ENCFF311III.bigWig hg19 released antibody characterized with exemption ENCFF321XBA bigWig signal p-value ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF371NEP 1266986051 ENCODE Processing Pipeline 9e44fc293b83adf0cec491c8a0eddab2 https://www.encodeproject.org/files/ENCFF321XBA/@@download/ENCFF321XBA.bigWig hg19 released antibody characterized with exemption ENCFF668MTT bigWig signal p-value ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF371NEP, ENCFF868KHL 1494406300 ENCODE Processing Pipeline 7d58c3e5283f515f2794a940520b4799 https://www.encodeproject.org/files/ENCFF668MTT/@@download/ENCFF668MTT.bigWig hg19 released antibody characterized with exemption ENCFF791MAI bigWig fold change over control ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF868KHL 1038477416 ENCODE Processing Pipeline d3195bb64b07d3ddee2f7fd6315dcfd2 https://www.encodeproject.org/files/ENCFF791MAI/@@download/ENCFF791MAI.bigWig hg19 released antibody characterized with exemption ENCFF473VRU bigWig fold change over control ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF371NEP 1126293313 ENCODE Processing Pipeline ddf8b7450cca97a5aae65197a7592d6f https://www.encodeproject.org/files/ENCFF473VRU/@@download/ENCFF473VRU.bigWig hg19 released antibody characterized with exemption ENCFF916ADP bigWig fold change over control ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF371NEP, ENCFF868KHL 1631395016 ENCODE Processing Pipeline a7612db583039d95d5558abdb6563910 https://www.encodeproject.org/files/ENCFF916ADP/@@download/ENCFF916ADP.bigWig hg19 released antibody characterized with exemption ENCFF135KRY bed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF868KHL 6587417 ENCODE Processing Pipeline 0a9db420a0a052781c830864eab79ae6 https://www.encodeproject.org/files/ENCFF135KRY/@@download/ENCFF135KRY.bed.gz hg19 released antibody characterized with exemption ENCFF771RJQ bed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF371NEP 6506103 ENCODE Processing Pipeline 58b29f71002828a507239a8a02689344 https://www.encodeproject.org/files/ENCFF771RJQ/@@download/ENCFF771RJQ.bed.gz hg19 released antibody characterized with exemption ENCFF928PLM bed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF371NEP, ENCFF868KHL 6974632 ENCODE Processing Pipeline c8db98966e324437a639f6e1a86544ba https://www.encodeproject.org/files/ENCFF928PLM/@@download/ENCFF928PLM.bed.gz hg19 released antibody characterized with exemption ENCFF761KAX bigBed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF771RJQ 13172426 ENCODE Processing Pipeline 0ffe060bb6e823e3d3a73afe2d957c81 https://www.encodeproject.org/files/ENCFF761KAX/@@download/ENCFF761KAX.bigBed hg19 released antibody characterized with exemption ENCFF385ICH bigBed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF135KRY 12857976 ENCODE Processing Pipeline 4460a7125f7bdfbf09fbf4cebae5db33 https://www.encodeproject.org/files/ENCFF385ICH/@@download/ENCFF385ICH.bigBed hg19 released antibody characterized with exemption ENCFF517NXJ bigBed narrowPeak peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF928PLM 13127989 ENCODE Processing Pipeline 78668c5498da72079acf6fd9e7fe6d62 https://www.encodeproject.org/files/ENCFF517NXJ/@@download/ENCFF517NXJ.bigBed hg19 released antibody characterized with exemption ENCFF787WAI bed narrowPeak conservative idr thresholded peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF135KRY, ENCFF771RJQ, ENCFF928PLM 718619 ENCODE Processing Pipeline 56e17f95b215a59096569fa01ce05f23 https://www.encodeproject.org/files/ENCFF787WAI/@@download/ENCFF787WAI.bed.gz hg19 released antibody characterized with exemption ENCFF487YKX bigBed narrowPeak optimal idr thresholded peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF484WVM 1488633 ENCODE Processing Pipeline ccaf2f9c2af77129c6f4dedf3b037aa4 https://www.encodeproject.org/files/ENCFF487YKX/@@download/ENCFF487YKX.bigBed hg19 released antibody characterized with exemption ENCFF484WVM bed narrowPeak optimal idr thresholded peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF135KRY, ENCFF771RJQ, ENCFF928PLM 763626 ENCODE Processing Pipeline 68903538af7a7665b4f666544f6e9cb9 https://www.encodeproject.org/files/ENCFF484WVM/@@download/ENCFF484WVM.bed.gz hg19 released antibody characterized with exemption ENCFF716BXV bigBed narrowPeak conservative idr thresholded peaks ENCSR826YMT ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-SMAD4-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF787WAI 1420211 ENCODE Processing Pipeline 48bc9dd56c16b7bdfc102c87512d05c0 https://www.encodeproject.org/files/ENCFF716BXV/@@download/ENCFF716BXV.bigBed hg19 released antibody characterized with exemption ENCFF300QMB fastq reads ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1312098322 Richard Myers, HAIB 27f214dfdc4afb5663152aec44cc80b8 SRA:SRR5331229 https://www.encodeproject.org/files/ENCFF300QMB/@@download/ENCFF300QMB.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF842KVM fastq reads ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1467434478 Richard Myers, HAIB 348a3628aa79bc2525058314d6459f40 SRA:SRR5331228 https://www.encodeproject.org/files/ENCFF842KVM/@@download/ENCFF842KVM.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF134LGG bam unfiltered alignments ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF300QMB, ENCFF807MUK 1428826956 ENCODE Processing Pipeline 26689d61ff2146636d9fd345b5e394f0 https://www.encodeproject.org/files/ENCFF134LGG/@@download/ENCFF134LGG.bam hg19 released antibody characterized with exemption ENCFF265GNF bam unfiltered alignments ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF300QMB, ENCFF643CGH 1432023029 ENCODE Processing Pipeline 76fd90e09c16eac219da00507a6b47e6 https://www.encodeproject.org/files/ENCFF265GNF/@@download/ENCFF265GNF.bam GRCh38 released antibody characterized with exemption ENCFF909FDN bam alignments ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF300QMB, ENCFF807MUK 1096876481 ENCODE Processing Pipeline 3a8665bde532d484c8250e189e5b52b8 https://www.encodeproject.org/files/ENCFF909FDN/@@download/ENCFF909FDN.bam hg19 released antibody characterized with exemption ENCFF650PCW bam unfiltered alignments ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF842KVM 1574145589 ENCODE Processing Pipeline 3a5aef1a721092d073e2793dc7b9af11 https://www.encodeproject.org/files/ENCFF650PCW/@@download/ENCFF650PCW.bam hg19 released antibody characterized with exemption ENCFF930GGN bam alignments ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF842KVM 1142998416 ENCODE Processing Pipeline 99ce6112c5d25775cb4a6ef5a07867c2 https://www.encodeproject.org/files/ENCFF930GGN/@@download/ENCFF930GGN.bam GRCh38 released antibody characterized with exemption ENCFF858XHV bam unfiltered alignments ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF842KVM 1578820822 ENCODE Processing Pipeline c8772318586da8c05b082a7c3a54328b https://www.encodeproject.org/files/ENCFF858XHV/@@download/ENCFF858XHV.bam GRCh38 released antibody characterized with exemption ENCFF509PAA bam alignments ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF842KVM 1142053179 ENCODE Processing Pipeline 1912f94452f31ff2f6de03c2d8dd6b43 https://www.encodeproject.org/files/ENCFF509PAA/@@download/ENCFF509PAA.bam hg19 released antibody characterized with exemption ENCFF189RMF bam alignments ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF300QMB, ENCFF643CGH 1097530402 ENCODE Processing Pipeline 35cda8dcd780f4f1ba25cf2293008757 https://www.encodeproject.org/files/ENCFF189RMF/@@download/ENCFF189RMF.bam GRCh38 released antibody characterized with exemption ENCFF433FTV bigWig signal p-value ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF930GGN 458684717 ENCODE Processing Pipeline 642f221aa3d28e1cc506a797c3094f2f https://www.encodeproject.org/files/ENCFF433FTV/@@download/ENCFF433FTV.bigWig GRCh38 released antibody characterized with exemption ENCFF755VOE bigWig signal p-value ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF189RMF 513482073 ENCODE Processing Pipeline 87a5956c874360ebbbba3d269814c404 https://www.encodeproject.org/files/ENCFF755VOE/@@download/ENCFF755VOE.bigWig GRCh38 released antibody characterized with exemption ENCFF721KWN bigWig signal p-value ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF189RMF, ENCFF930GGN 647852637 ENCODE Processing Pipeline d172c62ce19fa675ea2a87ad37be9faa https://www.encodeproject.org/files/ENCFF721KWN/@@download/ENCFF721KWN.bigWig GRCh38 released antibody characterized with exemption ENCFF670LBC bigWig fold change over control ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF930GGN 438600527 ENCODE Processing Pipeline 3a71b1d44dac1ee915e4ee8b68e68927 https://www.encodeproject.org/files/ENCFF670LBC/@@download/ENCFF670LBC.bigWig GRCh38 released antibody characterized with exemption ENCFF102BHO bigWig fold change over control ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF189RMF 432088351 ENCODE Processing Pipeline d10f31bc2ded5e0ba389973c20391125 https://www.encodeproject.org/files/ENCFF102BHO/@@download/ENCFF102BHO.bigWig GRCh38 released antibody characterized with exemption ENCFF729GLM bed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF930GGN 5502475 ENCODE Processing Pipeline 6b592703620b0d8d91789a0942bde525 https://www.encodeproject.org/files/ENCFF729GLM/@@download/ENCFF729GLM.bed.gz GRCh38 released antibody characterized with exemption ENCFF753WRC bigWig fold change over control ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF189RMF, ENCFF930GGN 720786065 ENCODE Processing Pipeline 0c945b30bec7b3b46e54bc61bfa4bccb https://www.encodeproject.org/files/ENCFF753WRC/@@download/ENCFF753WRC.bigWig GRCh38 released antibody characterized with exemption ENCFF105ZST bigBed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF729GLM 13115879 ENCODE Processing Pipeline 7cdac14978e226bff95b6af9f6f7b2b8 https://www.encodeproject.org/files/ENCFF105ZST/@@download/ENCFF105ZST.bigBed GRCh38 released antibody characterized with exemption ENCFF079PNN bed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF189RMF 5483985 ENCODE Processing Pipeline 1b7a6f4c2e4e14551e2f4e1845004c95 https://www.encodeproject.org/files/ENCFF079PNN/@@download/ENCFF079PNN.bed.gz GRCh38 released antibody characterized with exemption ENCFF076ZRD bed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF189RMF, ENCFF930GGN 6338753 ENCODE Processing Pipeline ae2445044660b56962534e2474f74bda https://www.encodeproject.org/files/ENCFF076ZRD/@@download/ENCFF076ZRD.bed.gz GRCh38 released antibody characterized with exemption ENCFF961QJN bigBed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF079PNN 13062426 ENCODE Processing Pipeline 48ef19bf1f83c6221fb298d4bc167f61 https://www.encodeproject.org/files/ENCFF961QJN/@@download/ENCFF961QJN.bigBed GRCh38 released antibody characterized with exemption ENCFF231MDY bigBed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF076ZRD 13158892 ENCODE Processing Pipeline bfbf6a7a75d9335885f98ae6f4c8be45 https://www.encodeproject.org/files/ENCFF231MDY/@@download/ENCFF231MDY.bigBed GRCh38 released antibody characterized with exemption ENCFF914VTC bed narrowPeak conservative idr thresholded peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF076ZRD, ENCFF079PNN, ENCFF419RSJ, ENCFF729GLM 220689 ENCODE Processing Pipeline 28a07b37432666aa70820e3ce094050a https://www.encodeproject.org/files/ENCFF914VTC/@@download/ENCFF914VTC.bed.gz GRCh38 released antibody characterized with exemption ENCFF874LAC bed narrowPeak optimal idr thresholded peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF076ZRD, ENCFF079PNN, ENCFF419RSJ, ENCFF729GLM 259414 ENCODE Processing Pipeline d0579cc77370b832456d78d13c490fb7 https://www.encodeproject.org/files/ENCFF874LAC/@@download/ENCFF874LAC.bed.gz GRCh38 released antibody characterized with exemption ENCFF252CLR bigBed narrowPeak conservative idr thresholded peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF914VTC 416746 ENCODE Processing Pipeline 68e51640d01a06762677f20550167f09 https://www.encodeproject.org/files/ENCFF252CLR/@@download/ENCFF252CLR.bigBed GRCh38 released antibody characterized with exemption ENCFF699VDS bigBed narrowPeak optimal idr thresholded peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF874LAC 470989 ENCODE Processing Pipeline 8f1ff6a53d7bb6077e7d0fd9876d5df7 https://www.encodeproject.org/files/ENCFF699VDS/@@download/ENCFF699VDS.bigBed GRCh38 released antibody characterized with exemption ENCFF871XDO bigWig signal p-value ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF509PAA 1131334084 ENCODE Processing Pipeline 22a1cfc22cab7da0305c1f1f3c14c175 https://www.encodeproject.org/files/ENCFF871XDO/@@download/ENCFF871XDO.bigWig hg19 released antibody characterized with exemption ENCFF765GFY bigWig signal p-value ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF909FDN 1150703570 ENCODE Processing Pipeline 3480455e18ee5f3b275dc7243ceb4f13 https://www.encodeproject.org/files/ENCFF765GFY/@@download/ENCFF765GFY.bigWig hg19 released antibody characterized with exemption ENCFF777ZUQ bigWig signal p-value ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF509PAA, ENCFF909FDN 1459977715 ENCODE Processing Pipeline d10b39a9d62edcddf1ace16adbbfca7f https://www.encodeproject.org/files/ENCFF777ZUQ/@@download/ENCFF777ZUQ.bigWig hg19 released antibody characterized with exemption ENCFF166AHU bigWig fold change over control ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF509PAA 819310491 ENCODE Processing Pipeline a0ee3dd637bf736dc132fdf5e4732cf1 https://www.encodeproject.org/files/ENCFF166AHU/@@download/ENCFF166AHU.bigWig hg19 released antibody characterized with exemption ENCFF617NUG bigWig fold change over control ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF509PAA, ENCFF909FDN 1293388334 ENCODE Processing Pipeline 6e571a0cf0364806ffd5ec100e55c339 https://www.encodeproject.org/files/ENCFF617NUG/@@download/ENCFF617NUG.bigWig hg19 released antibody characterized with exemption ENCFF260SFP bigWig fold change over control ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF909FDN 807891379 ENCODE Processing Pipeline 2603ac5074bc5ba3924eba81a76c9cf6 https://www.encodeproject.org/files/ENCFF260SFP/@@download/ENCFF260SFP.bigWig hg19 released antibody characterized with exemption ENCFF461JRP bed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF509PAA, ENCFF909FDN 6833283 ENCODE Processing Pipeline 58152feea8d0ca88e5f0c325558b46ec https://www.encodeproject.org/files/ENCFF461JRP/@@download/ENCFF461JRP.bed.gz hg19 released antibody characterized with exemption ENCFF995YHB bed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF509PAA 6202782 ENCODE Processing Pipeline 46ae9bdd6b811685056a8d623cf701c2 https://www.encodeproject.org/files/ENCFF995YHB/@@download/ENCFF995YHB.bed.gz hg19 released antibody characterized with exemption ENCFF622AQP bed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF909FDN 6276248 ENCODE Processing Pipeline 23c579e00ef205d77a62570bbee24232 https://www.encodeproject.org/files/ENCFF622AQP/@@download/ENCFF622AQP.bed.gz hg19 released antibody characterized with exemption ENCFF941XJO bigBed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF622AQP 13209524 ENCODE Processing Pipeline 4f24c04529802d65be5de5b82517b9d7 https://www.encodeproject.org/files/ENCFF941XJO/@@download/ENCFF941XJO.bigBed hg19 released antibody characterized with exemption ENCFF481MJB bigBed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF461JRP 13122474 ENCODE Processing Pipeline 115d7289316d7e2da1a42b4fe0652df4 https://www.encodeproject.org/files/ENCFF481MJB/@@download/ENCFF481MJB.bigBed hg19 released antibody characterized with exemption ENCFF978TNA bigBed narrowPeak peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF995YHB 13154114 ENCODE Processing Pipeline f8ac2abbbc57423a5dd693fa1af8f0e7 https://www.encodeproject.org/files/ENCFF978TNA/@@download/ENCFF978TNA.bigBed hg19 released antibody characterized with exemption ENCFF885BTK bigBed narrowPeak conservative idr thresholded peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF024JUM 404073 ENCODE Processing Pipeline 63cb30f909b7046a91ff6b5c5f855a60 https://www.encodeproject.org/files/ENCFF885BTK/@@download/ENCFF885BTK.bigBed hg19 released antibody characterized with exemption ENCFF024JUM bed narrowPeak conservative idr thresholded peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF461JRP, ENCFF622AQP, ENCFF995YHB 205365 ENCODE Processing Pipeline fef33e9b3082f16e0e49ae1276cbc443 https://www.encodeproject.org/files/ENCFF024JUM/@@download/ENCFF024JUM.bed.gz hg19 released antibody characterized with exemption ENCFF204MXR bigBed narrowPeak optimal idr thresholded peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF209YKP 445963 ENCODE Processing Pipeline b2632d73878409bc3d8205e35ed0d48e https://www.encodeproject.org/files/ENCFF204MXR/@@download/ENCFF204MXR.bigBed hg19 released antibody characterized with exemption ENCFF209YKP bed narrowPeak optimal idr thresholded peaks ENCSR087NSR ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM1A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF461JRP, ENCFF622AQP, ENCFF995YHB 235451 ENCODE Processing Pipeline 66a6a14f2e13f421dfe24e2bd97c4fc2 https://www.encodeproject.org/files/ENCFF209YKP/@@download/ENCFF209YKP.bed.gz hg19 released antibody characterized with exemption ENCFF240REY fastq reads ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1392864712 Richard Myers, HAIB c94d48b4bad3aa0a64bb3587e52e847a SRA:SRR5339110 https://www.encodeproject.org/files/ENCFF240REY/@@download/ENCFF240REY.fastq.gz HiSeq 2000 /files/ENCFF147CMT/ released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF444RSD fastq reads ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 836254233 Richard Myers, HAIB 5537d47325c1e0b6ec89c1b70bf601ce SRA:SRR5339111 https://www.encodeproject.org/files/ENCFF444RSD/@@download/ENCFF444RSD.fastq.gz HiSeq 2000 /files/ENCFF147CMT/ released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF756TTX bam alignments ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF444RSD, ENCFF807MUK 741640215 ENCODE Processing Pipeline 4a8878fff1ac7c9d83a70230b2467ec2 https://www.encodeproject.org/files/ENCFF756TTX/@@download/ENCFF756TTX.bam hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF833MPT bam alignments ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF240REY, ENCFF807MUK 1201925025 ENCODE Processing Pipeline 769d4f76d51e3688bc3cbd3632b67a9c https://www.encodeproject.org/files/ENCFF833MPT/@@download/ENCFF833MPT.bam hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF117BJC bigWig signal p-value ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF708TFQ, ENCFF833MPT 473296544 ENCODE Processing Pipeline 2b0d3ffc489ed80b7c59dc3d2df83319 https://www.encodeproject.org/files/ENCFF117BJC/@@download/ENCFF117BJC.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF771ZWY bigWig signal p-value ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF708TFQ, ENCFF756TTX 431156365 ENCODE Processing Pipeline ff45ed9bb4529bb20256368cf82d98da https://www.encodeproject.org/files/ENCFF771ZWY/@@download/ENCFF771ZWY.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF302EJQ bigWig signal p-value ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF708TFQ, ENCFF756TTX, ENCFF833MPT 481125910 ENCODE Processing Pipeline d61a29249859b63755d708f4b2ed201d https://www.encodeproject.org/files/ENCFF302EJQ/@@download/ENCFF302EJQ.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF316NRF bigWig fold change over control ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF708TFQ, ENCFF833MPT 551120396 ENCODE Processing Pipeline e2d99f9a717d00d20a2c5dc22d352009 https://www.encodeproject.org/files/ENCFF316NRF/@@download/ENCFF316NRF.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF928MMD bed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF708TFQ, ENCFF833MPT 6030812 ENCODE Processing Pipeline 76f9f0a75422f46e2b6b0e4d7bf2f7f8 https://www.encodeproject.org/files/ENCFF928MMD/@@download/ENCFF928MMD.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF661GPF bigWig fold change over control ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF708TFQ, ENCFF756TTX, ENCFF833MPT 794821678 ENCODE Processing Pipeline 7b28a59bbab0af1c37c8b542e37d0e90 https://www.encodeproject.org/files/ENCFF661GPF/@@download/ENCFF661GPF.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF299ENM bed narrowPeak optimal idr thresholded peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF199FFU, ENCFF421NCI, ENCFF928MMD 108732 ENCODE Processing Pipeline 8a728f81094a659b30119c850638b1a0 https://www.encodeproject.org/files/ENCFF299ENM/@@download/ENCFF299ENM.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF281KPR bigWig fold change over control ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF708TFQ, ENCFF756TTX 377396734 ENCODE Processing Pipeline 4657cbbdd5013f5587f74001fb70fc88 https://www.encodeproject.org/files/ENCFF281KPR/@@download/ENCFF281KPR.bigWig hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF182VFL bed narrowPeak conservative idr thresholded peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF199FFU, ENCFF421NCI, ENCFF928MMD 94798 ENCODE Processing Pipeline 6e53c21f55de94be30446ecfc5bb20db https://www.encodeproject.org/files/ENCFF182VFL/@@download/ENCFF182VFL.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF199FFU bed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF708TFQ, ENCFF756TTX 5036581 ENCODE Processing Pipeline 9497167b31a81466464cc0458197e940 https://www.encodeproject.org/files/ENCFF199FFU/@@download/ENCFF199FFU.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF479RGT bigBed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF928MMD 13181358 ENCODE Processing Pipeline ef03b136dbf6fc4e63d4711820881dc4 https://www.encodeproject.org/files/ENCFF479RGT/@@download/ENCFF479RGT.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF421NCI bed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF708TFQ, ENCFF756TTX, ENCFF833MPT 6177113 ENCODE Processing Pipeline ec2715240bae69e4afec737aff9b8847 https://www.encodeproject.org/files/ENCFF421NCI/@@download/ENCFF421NCI.bed.gz hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF554JSB bigBed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF199FFU 11071888 ENCODE Processing Pipeline b5e146f172dad3be71fe7e1eecc74f0f https://www.encodeproject.org/files/ENCFF554JSB/@@download/ENCFF554JSB.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF003AXW bigBed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF421NCI 13183409 ENCODE Processing Pipeline 1c94212d9b4d8a68f6c190a8e71b7967 https://www.encodeproject.org/files/ENCFF003AXW/@@download/ENCFF003AXW.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF642SBL bigBed narrowPeak conservative idr thresholded peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF182VFL 236890 ENCODE Processing Pipeline 69247fe87a53a0542c2939e1f29b19f5 https://www.encodeproject.org/files/ENCFF642SBL/@@download/ENCFF642SBL.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF067YGQ bigBed narrowPeak optimal idr thresholded peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF299ENM 259683 ENCODE Processing Pipeline 0a956013b270919fb2c5fd299b6b2129 https://www.encodeproject.org/files/ENCFF067YGQ/@@download/ENCFF067YGQ.bigBed hg19 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF673UNF bam unfiltered alignments ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF444RSD, ENCFF643CGH 954761726 ENCODE Processing Pipeline e84987096f9ee3a87d1f4cd8e9e31db9 https://www.encodeproject.org/files/ENCFF673UNF/@@download/ENCFF673UNF.bam GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF370JWF bam unfiltered alignments ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF240REY, ENCFF643CGH 1571435103 ENCODE Processing Pipeline 3ea48d2ecb11949a64dcf8e014ca50ae https://www.encodeproject.org/files/ENCFF370JWF/@@download/ENCFF370JWF.bam GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF836TAY bam alignments ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF444RSD, ENCFF643CGH 741496829 ENCODE Processing Pipeline 09cf077c26302719cc4c0623c0aa843c https://www.encodeproject.org/files/ENCFF836TAY/@@download/ENCFF836TAY.bam GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF897TJD bam alignments ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF240REY, ENCFF643CGH 1201800617 ENCODE Processing Pipeline a49cae8c843aba9c6f0ff8bd0e01f614 https://www.encodeproject.org/files/ENCFF897TJD/@@download/ENCFF897TJD.bam GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF072TWX bigWig signal p-value ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF619EAZ, ENCFF897TJD 469648975 ENCODE Processing Pipeline 9481c29a03f8ebb6263c8e4420fcf610 https://www.encodeproject.org/files/ENCFF072TWX/@@download/ENCFF072TWX.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF169QMI bigWig signal p-value ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF619EAZ, ENCFF836TAY, ENCFF897TJD 485958642 ENCODE Processing Pipeline f0ff4cb7b7a59959b3f77a7cc4bf8abd https://www.encodeproject.org/files/ENCFF169QMI/@@download/ENCFF169QMI.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF259AAH bigWig signal p-value ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF619EAZ, ENCFF836TAY 369507178 ENCODE Processing Pipeline a6d82d8b5c1a0a0b023d5dbcefd4a931 https://www.encodeproject.org/files/ENCFF259AAH/@@download/ENCFF259AAH.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF778FTU bigWig fold change over control ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF619EAZ, ENCFF836TAY 362366455 ENCODE Processing Pipeline cbf40d9d78b80c27de2897ba8baf6138 https://www.encodeproject.org/files/ENCFF778FTU/@@download/ENCFF778FTU.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF362RYE bigWig fold change over control ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF619EAZ, ENCFF897TJD 550437185 ENCODE Processing Pipeline 08693924e77a0bde8f4203dd3437784c https://www.encodeproject.org/files/ENCFF362RYE/@@download/ENCFF362RYE.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF864ZRY bigWig fold change over control ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF619EAZ, ENCFF836TAY, ENCFF897TJD 803105719 ENCODE Processing Pipeline 24bc7928f6694071704b406cbf26ef00 https://www.encodeproject.org/files/ENCFF864ZRY/@@download/ENCFF864ZRY.bigWig GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF104DSB bed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF619EAZ, ENCFF897TJD 5810975 ENCODE Processing Pipeline 13dd44ec745b028dbe79e5987187ec0e https://www.encodeproject.org/files/ENCFF104DSB/@@download/ENCFF104DSB.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF789HKA bed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF619EAZ, ENCFF836TAY 4783991 ENCODE Processing Pipeline 2f5396a1739edf72c8b47e8a1d932872 https://www.encodeproject.org/files/ENCFF789HKA/@@download/ENCFF789HKA.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF966LBP bed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF619EAZ, ENCFF836TAY, ENCFF897TJD 5967318 ENCODE Processing Pipeline bb2c877817bfe5ed436c72bc6d208090 https://www.encodeproject.org/files/ENCFF966LBP/@@download/ENCFF966LBP.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF064NUG bigBed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF966LBP 13176950 ENCODE Processing Pipeline aa5fb9b98af287fcbcaa200b16975d32 https://www.encodeproject.org/files/ENCFF064NUG/@@download/ENCFF064NUG.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF946XDG bed narrowPeak conservative idr thresholded peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF104DSB, ENCFF419RSJ, ENCFF789HKA, ENCFF966LBP 94133 ENCODE Processing Pipeline 9264e3bb0498b60267f3789a734e2340 https://www.encodeproject.org/files/ENCFF946XDG/@@download/ENCFF946XDG.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF846UVI bigBed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF104DSB 13144085 ENCODE Processing Pipeline 2f83a05476b116d5c06c8dcd0e6f8e2d https://www.encodeproject.org/files/ENCFF846UVI/@@download/ENCFF846UVI.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF731MLM bigBed narrowPeak conservative idr thresholded peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF946XDG 236094 ENCODE Processing Pipeline bd9cbf71b10822765728d226f5216643 https://www.encodeproject.org/files/ENCFF731MLM/@@download/ENCFF731MLM.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF631UVP bed narrowPeak optimal idr thresholded peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF104DSB, ENCFF419RSJ, ENCFF789HKA, ENCFF966LBP 109797 ENCODE Processing Pipeline f48a69bf1cd387f7c491b6b9dd668ac9 https://www.encodeproject.org/files/ENCFF631UVP/@@download/ENCFF631UVP.bed.gz GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF421OMZ bigBed narrowPeak peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF789HKA 10854847 ENCODE Processing Pipeline d4b6dbd600b844764063302f1b018659 https://www.encodeproject.org/files/ENCFF421OMZ/@@download/ENCFF421OMZ.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF919QJN bigBed narrowPeak optimal idr thresholded peaks ENCSR669LCD ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ATF4-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF631UVP 262862 ENCODE Processing Pipeline fc9c767e947fdaf8ccae4063f3a7d5f6 https://www.encodeproject.org/files/ENCFF919QJN/@@download/ENCFF919QJN.bigBed GRCh38 released antibody characterized with exemption, low read depth missing mapped reads lengths, missing unfiltered alignments ENCFF490CEX fastq reads ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 1595092496 Richard Myers, HAIB 5a4a65ac4c0c7a2f3a9fbe5e7d58ff79 SRA:SRR5339638 https://www.encodeproject.org/files/ENCFF490CEX/@@download/ENCFF490CEX.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF968PBN fastq reads ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1426187274 Richard Myers, HAIB 936d62de08639e9784aab886cc5820eb SRA:SRR5339637 https://www.encodeproject.org/files/ENCFF968PBN/@@download/ENCFF968PBN.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF288KSL bam alignments ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF807MUK, ENCFF968PBN 1216851083 ENCODE Processing Pipeline e822e9f22af17af022caa9663bbc5388 https://www.encodeproject.org/files/ENCFF288KSL/@@download/ENCFF288KSL.bam hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF057OSU bam alignments ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF490CEX, ENCFF807MUK 1349895361 ENCODE Processing Pipeline c75d61e88714331f1b0170a18bfdfb8d https://www.encodeproject.org/files/ENCFF057OSU/@@download/ENCFF057OSU.bam hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF471AEV bigWig signal p-value ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF288KSL 468840798 ENCODE Processing Pipeline 864442139a6cf49b17edaadbfceefae0 https://www.encodeproject.org/files/ENCFF471AEV/@@download/ENCFF471AEV.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF182VPR bigWig fold change over control ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF057OSU 524156140 ENCODE Processing Pipeline c9ad5e19ec9dafe7bb50cf505ca4323f https://www.encodeproject.org/files/ENCFF182VPR/@@download/ENCFF182VPR.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF431KJE bigWig signal p-value ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF057OSU 449584777 ENCODE Processing Pipeline 4100e27b54b688ac9acb1d9b5c3b8127 https://www.encodeproject.org/files/ENCFF431KJE/@@download/ENCFF431KJE.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF429HJR bigWig signal p-value ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF057OSU, ENCFF288KSL 412264585 ENCODE Processing Pipeline 6023b5c0291af25d4040c205d278642c https://www.encodeproject.org/files/ENCFF429HJR/@@download/ENCFF429HJR.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF589UPF bigWig fold change over control ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF288KSL 487043736 ENCODE Processing Pipeline 8b6fd48ab7b29e5c53adcdf48cf5685c https://www.encodeproject.org/files/ENCFF589UPF/@@download/ENCFF589UPF.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF974HXD bed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF288KSL 5946806 ENCODE Processing Pipeline 299055779b6b64cebc8b29c4ef789dd4 https://www.encodeproject.org/files/ENCFF974HXD/@@download/ENCFF974HXD.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF875MHD bigBed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF974HXD 13278680 ENCODE Processing Pipeline 4760e4e70ffa811a06c2517b8c1727e7 https://www.encodeproject.org/files/ENCFF875MHD/@@download/ENCFF875MHD.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF414XQK bed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF057OSU 6071395 ENCODE Processing Pipeline 84d5a9c8d95bf70ec239648d32980e37 https://www.encodeproject.org/files/ENCFF414XQK/@@download/ENCFF414XQK.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF743RLT bed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF057OSU, ENCFF288KSL 6822976 ENCODE Processing Pipeline 73cf958f66db8c6cf956cdc243d754ef https://www.encodeproject.org/files/ENCFF743RLT/@@download/ENCFF743RLT.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF067RJV bigBed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF414XQK 13263176 ENCODE Processing Pipeline 7be9ad3cdbccc4aa9d905b3b6f92e744 https://www.encodeproject.org/files/ENCFF067RJV/@@download/ENCFF067RJV.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF788ULJ bigBed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF743RLT 13164361 ENCODE Processing Pipeline 997bf7dd3a2ddf2946805823cc8fbc2d https://www.encodeproject.org/files/ENCFF788ULJ/@@download/ENCFF788ULJ.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF345LNB bigWig fold change over control ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF057OSU, ENCFF288KSL 880008941 ENCODE Processing Pipeline d28ad5cf3f4548ae1c30ef5acc106b60 https://www.encodeproject.org/files/ENCFF345LNB/@@download/ENCFF345LNB.bigWig hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF396DOW bigBed narrowPeak conservative idr thresholded peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF834ACA 726760 ENCODE Processing Pipeline 3472665661d5d6130fa150053c7e0a14 https://www.encodeproject.org/files/ENCFF396DOW/@@download/ENCFF396DOW.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF037KBA bed narrowPeak optimal idr thresholded peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF414XQK, ENCFF743RLT, ENCFF974HXD 387181 ENCODE Processing Pipeline 0384e246befd811ed830cf323336589c https://www.encodeproject.org/files/ENCFF037KBA/@@download/ENCFF037KBA.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF834ACA bed narrowPeak conservative idr thresholded peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF414XQK, ENCFF743RLT, ENCFF974HXD 369940 ENCODE Processing Pipeline 6806621458352055fbb82bfae1c4c47d https://www.encodeproject.org/files/ENCFF834ACA/@@download/ENCFF834ACA.bed.gz hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF206TWV bigBed narrowPeak optimal idr thresholded peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF037KBA 752728 ENCODE Processing Pipeline dd32863229048c93703e97b411758eb4 https://www.encodeproject.org/files/ENCFF206TWV/@@download/ENCFF206TWV.bigBed hg19 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF037LPX bam unfiltered alignments ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF968PBN 1589339792 ENCODE Processing Pipeline c2102943bed1b8066de82373d952efed https://www.encodeproject.org/files/ENCFF037LPX/@@download/ENCFF037LPX.bam GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF601ADC bam unfiltered alignments ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF490CEX, ENCFF643CGH 1763469499 ENCODE Processing Pipeline 60c185c75290ae900787e265878ce0ce https://www.encodeproject.org/files/ENCFF601ADC/@@download/ENCFF601ADC.bam GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF810AAT bam alignments ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF490CEX, ENCFF643CGH 1349864211 ENCODE Processing Pipeline c9ff43eaaf89ef29b1c7eb8e8c7fd291 https://www.encodeproject.org/files/ENCFF810AAT/@@download/ENCFF810AAT.bam GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF479GFZ bam alignments ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF968PBN 1216753924 ENCODE Processing Pipeline 1f11d7cf61918649794fefcd27c6819d https://www.encodeproject.org/files/ENCFF479GFZ/@@download/ENCFF479GFZ.bam GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF064BUM bigWig signal p-value ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF810AAT 451137392 ENCODE Processing Pipeline b5e6cabd00633d6356379c066032bc42 https://www.encodeproject.org/files/ENCFF064BUM/@@download/ENCFF064BUM.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF541ZYD bigWig signal p-value ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF479GFZ, ENCFF582CVJ 468985828 ENCODE Processing Pipeline 3d032b07a5a746c0a956e628045dd3f7 https://www.encodeproject.org/files/ENCFF541ZYD/@@download/ENCFF541ZYD.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF018YZH bigWig signal p-value ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF479GFZ, ENCFF582CVJ, ENCFF810AAT 420495960 ENCODE Processing Pipeline e40a04f6492cdd69b278924899e99ad0 https://www.encodeproject.org/files/ENCFF018YZH/@@download/ENCFF018YZH.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF857PDJ bigWig fold change over control ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF479GFZ, ENCFF582CVJ 493032671 ENCODE Processing Pipeline 0a44cc7b85d770e434077a5683775ad9 https://www.encodeproject.org/files/ENCFF857PDJ/@@download/ENCFF857PDJ.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF774CIA bigWig fold change over control ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF810AAT 531126226 ENCODE Processing Pipeline 33f28afdfebfb0d8978ad38e5e6ce0fe https://www.encodeproject.org/files/ENCFF774CIA/@@download/ENCFF774CIA.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF397LLR bigWig fold change over control ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF479GFZ, ENCFF582CVJ, ENCFF810AAT 897825516 ENCODE Processing Pipeline 2ecd3338cb8c5facd8b937ae7933422b https://www.encodeproject.org/files/ENCFF397LLR/@@download/ENCFF397LLR.bigWig GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF825FSJ bed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF810AAT 5951536 ENCODE Processing Pipeline 4249768e5ad644123ab3fd4b008ef52c https://www.encodeproject.org/files/ENCFF825FSJ/@@download/ENCFF825FSJ.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF785HOC bed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF479GFZ, ENCFF582CVJ 5775759 ENCODE Processing Pipeline 554927889a7dc4f2007e7a4e2ba5ea95 https://www.encodeproject.org/files/ENCFF785HOC/@@download/ENCFF785HOC.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF302URQ bed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF479GFZ, ENCFF582CVJ, ENCFF810AAT 6666369 ENCODE Processing Pipeline 822736b90c18461724fa9f0d1f2a768f https://www.encodeproject.org/files/ENCFF302URQ/@@download/ENCFF302URQ.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF372FAF bigBed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF785HOC 13230474 ENCODE Processing Pipeline 63f87697ac7a33ebb2473bbc5d4886dd https://www.encodeproject.org/files/ENCFF372FAF/@@download/ENCFF372FAF.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF311ZFI bigBed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF825FSJ 13239422 ENCODE Processing Pipeline 5ba8e062616f2a40304aafd041c73bc9 https://www.encodeproject.org/files/ENCFF311ZFI/@@download/ENCFF311ZFI.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF482RHW bed narrowPeak conservative idr thresholded peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF302URQ, ENCFF419RSJ, ENCFF785HOC, ENCFF825FSJ 369431 ENCODE Processing Pipeline 2bf0a7b4f6d8163ee212bcbcafcda19d https://www.encodeproject.org/files/ENCFF482RHW/@@download/ENCFF482RHW.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF007SPJ bigBed narrowPeak conservative idr thresholded peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF482RHW 728229 ENCODE Processing Pipeline a067234c5ce543568d1fd9a29fdedc12 https://www.encodeproject.org/files/ENCFF007SPJ/@@download/ENCFF007SPJ.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF661WFA bed narrowPeak optimal idr thresholded peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF302URQ, ENCFF419RSJ, ENCFF785HOC, ENCFF825FSJ 379783 ENCODE Processing Pipeline 748a1327fac6b0330ff8a20704b016b0 https://www.encodeproject.org/files/ENCFF661WFA/@@download/ENCFF661WFA.bed.gz GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF415ZNE bigBed narrowPeak peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF302URQ 13168741 ENCODE Processing Pipeline 9c36c7dc9ac5cb00923b5c515e43b4b0 https://www.encodeproject.org/files/ENCFF415ZNE/@@download/ENCFF415ZNE.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF798VML bigBed narrowPeak optimal idr thresholded peaks ENCSR993LMB ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TGIF2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF661WFA 746876 ENCODE Processing Pipeline 7ac66c220a5fadd2f4e50283d01e8f2b https://www.encodeproject.org/files/ENCFF798VML/@@download/ENCFF798VML.bigBed GRCh38 released control low read depth, antibody characterized with exemption missing unfiltered alignments ENCFF824RXN fastq reads ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1595678944 Richard Myers, HAIB 2d021bc73ccf642b1333286c81810a97 SRA:SRR5339386 https://www.encodeproject.org/files/ENCFF824RXN/@@download/ENCFF824RXN.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF006ALN fastq reads ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1372054277 Richard Myers, HAIB 0af2f65ec7c7c081b98a5cda985adeb5 SRA:SRR5339387 https://www.encodeproject.org/files/ENCFF006ALN/@@download/ENCFF006ALN.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF971QHE bam unfiltered alignments ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF006ALN, ENCFF643CGH 1655401974 ENCODE Processing Pipeline d6f7dcfb07853add47f242e233f4f234 https://www.encodeproject.org/files/ENCFF971QHE/@@download/ENCFF971QHE.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF931HDB bam unfiltered alignments ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF824RXN 1869136257 ENCODE Processing Pipeline e05f2f0ba95401c585b4b7c0e7483959 https://www.encodeproject.org/files/ENCFF931HDB/@@download/ENCFF931HDB.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF305HRL bam unfiltered alignments ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF006ALN, ENCFF807MUK 1650442211 ENCODE Processing Pipeline 2e13e2f758f091e0803be8b715ebb5e1 https://www.encodeproject.org/files/ENCFF305HRL/@@download/ENCFF305HRL.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF141LEW bam unfiltered alignments ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF824RXN 1866118908 ENCODE Processing Pipeline cd40d6d54d7f8a5ced596bf6ba71336e https://www.encodeproject.org/files/ENCFF141LEW/@@download/ENCFF141LEW.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF126WTF bam alignments ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF824RXN 1455876485 ENCODE Processing Pipeline d6f7e3208cd2d39b598b0583eee0b4fa https://www.encodeproject.org/files/ENCFF126WTF/@@download/ENCFF126WTF.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF135ZFA bam alignments ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF006ALN, ENCFF807MUK 1288712963 ENCODE Processing Pipeline 14aeec745be9da6d89ab94c50b51b57d https://www.encodeproject.org/files/ENCFF135ZFA/@@download/ENCFF135ZFA.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF466RAE bam alignments ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF807MUK, ENCFF824RXN 1455453441 ENCODE Processing Pipeline d0283caa39f550888936683fe0da7558 https://www.encodeproject.org/files/ENCFF466RAE/@@download/ENCFF466RAE.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF250XOF bam alignments ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF006ALN, ENCFF643CGH 1289695907 ENCODE Processing Pipeline 56ad54681e2306a1d9114b3ae40d0dc7 https://www.encodeproject.org/files/ENCFF250XOF/@@download/ENCFF250XOF.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF008QMD bigWig signal p-value ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126WTF 525988381 ENCODE Processing Pipeline cfe9bcca80565dbdd8978207fb6e0772 https://www.encodeproject.org/files/ENCFF008QMD/@@download/ENCFF008QMD.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF139BWC bigWig signal p-value ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF250XOF 554180008 ENCODE Processing Pipeline 01f9fd1d710d41182791c307d8ed2d70 https://www.encodeproject.org/files/ENCFF139BWC/@@download/ENCFF139BWC.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF570ODF bigWig signal p-value ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126WTF, ENCFF250XOF 658371496 ENCODE Processing Pipeline 75b0486e02ee8efd0cde7d8c891b8126 https://www.encodeproject.org/files/ENCFF570ODF/@@download/ENCFF570ODF.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF586RIR bigWig fold change over control ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126WTF 519962929 ENCODE Processing Pipeline 0d1e6ed68142d55390be2b2c4938ebe9 https://www.encodeproject.org/files/ENCFF586RIR/@@download/ENCFF586RIR.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF949GCG bigWig fold change over control ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF250XOF 586845833 ENCODE Processing Pipeline a60b01649b733074e5d9b7599c9dc39d https://www.encodeproject.org/files/ENCFF949GCG/@@download/ENCFF949GCG.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF118FXA bigWig fold change over control ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126WTF, ENCFF250XOF 841070994 ENCODE Processing Pipeline c1457cd253b5291c6667e4b7b953a4ae https://www.encodeproject.org/files/ENCFF118FXA/@@download/ENCFF118FXA.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF705OZK bed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF126WTF 6607353 ENCODE Processing Pipeline 83112b404af0164fdc1867853d91dbd1 https://www.encodeproject.org/files/ENCFF705OZK/@@download/ENCFF705OZK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF303KFS bed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF250XOF 6229036 ENCODE Processing Pipeline f9ed2cd0ffae8e74d5e242b05e5fe48d https://www.encodeproject.org/files/ENCFF303KFS/@@download/ENCFF303KFS.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF908ZBQ bed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF126WTF, ENCFF250XOF 6837349 ENCODE Processing Pipeline 22c2842da2e74cae636576580ff1b7a3 https://www.encodeproject.org/files/ENCFF908ZBQ/@@download/ENCFF908ZBQ.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF957DML bigBed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF303KFS 13102307 ENCODE Processing Pipeline f8a0ddb58b5d1c5f2b06f763f60ddddc https://www.encodeproject.org/files/ENCFF957DML/@@download/ENCFF957DML.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF544EXT bigBed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF705OZK 12847783 ENCODE Processing Pipeline 563b067b860eff9072a71c0dfc14ad83 https://www.encodeproject.org/files/ENCFF544EXT/@@download/ENCFF544EXT.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF893CJR bigBed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF908ZBQ 12945185 ENCODE Processing Pipeline 15917f18a59cd8610cfabd67a4d54838 https://www.encodeproject.org/files/ENCFF893CJR/@@download/ENCFF893CJR.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF369EVV bigBed narrowPeak conservative idr thresholded peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF589EKK 453943 ENCODE Processing Pipeline 8e45d0a2a8a3d94b9a7f460fe87e78f3 https://www.encodeproject.org/files/ENCFF369EVV/@@download/ENCFF369EVV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF589EKK bed narrowPeak conservative idr thresholded peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF303KFS, ENCFF419RSJ, ENCFF705OZK, ENCFF908ZBQ 200591 ENCODE Processing Pipeline ee7be155a85f0f57a254eb4fbff307a2 https://www.encodeproject.org/files/ENCFF589EKK/@@download/ENCFF589EKK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF024QKK bed narrowPeak optimal idr thresholded peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF303KFS, ENCFF419RSJ, ENCFF705OZK, ENCFF908ZBQ 331437 ENCODE Processing Pipeline cd3fc5f2be8b5af5112c49835563d005 https://www.encodeproject.org/files/ENCFF024QKK/@@download/ENCFF024QKK.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF252MTX bigBed narrowPeak optimal idr thresholded peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF024QKK 662999 ENCODE Processing Pipeline a5297c5462dcdb938b0a143f3438b7ae https://www.encodeproject.org/files/ENCFF252MTX/@@download/ENCFF252MTX.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF608CVI bigWig signal p-value ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF466RAE 1199400206 ENCODE Processing Pipeline ae07658ed4b72674c466e6f079e46ccb https://www.encodeproject.org/files/ENCFF608CVI/@@download/ENCFF608CVI.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF640WFE bigWig signal p-value ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF135ZFA, ENCFF203ABR, ENCFF466RAE 1480921213 ENCODE Processing Pipeline b66db62d9b4fc7bc5753a2660526cc14 https://www.encodeproject.org/files/ENCFF640WFE/@@download/ENCFF640WFE.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF344EHK bigWig signal p-value ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF135ZFA, ENCFF203ABR 1209205047 ENCODE Processing Pipeline b823dcaf6c15180a6f83e7a39dbdc929 https://www.encodeproject.org/files/ENCFF344EHK/@@download/ENCFF344EHK.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF040HWJ bigWig fold change over control ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF466RAE 1008332706 ENCODE Processing Pipeline a715da3ddac6270bf26056697b0682b9 https://www.encodeproject.org/files/ENCFF040HWJ/@@download/ENCFF040HWJ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF691ZIL bigWig fold change over control ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF135ZFA, ENCFF203ABR 849298195 ENCODE Processing Pipeline e646ae7dd31ca5701f804bacbc7cee26 https://www.encodeproject.org/files/ENCFF691ZIL/@@download/ENCFF691ZIL.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF684MOO bigWig fold change over control ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF135ZFA, ENCFF203ABR, ENCFF466RAE 1458200903 ENCODE Processing Pipeline ae8681d918b1d4c6b85c7e0b93254bb7 https://www.encodeproject.org/files/ENCFF684MOO/@@download/ENCFF684MOO.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF222SMQ bed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF466RAE 6933950 ENCODE Processing Pipeline 61b2379816819fb8c6d3c36a8de0431a https://www.encodeproject.org/files/ENCFF222SMQ/@@download/ENCFF222SMQ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF361GVH bed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF135ZFA, ENCFF203ABR 6238421 ENCODE Processing Pipeline 916ea4a04b1324c43a07b931cde791ef https://www.encodeproject.org/files/ENCFF361GVH/@@download/ENCFF361GVH.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF224KDP bed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF135ZFA, ENCFF203ABR, ENCFF466RAE 7064808 ENCODE Processing Pipeline 53eaeded7f6c6ed352ea08e28b64a37a https://www.encodeproject.org/files/ENCFF224KDP/@@download/ENCFF224KDP.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF095SYT bigBed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF222SMQ 12679341 ENCODE Processing Pipeline 3921476abe6a52a58ddbf748f5c7a944 https://www.encodeproject.org/files/ENCFF095SYT/@@download/ENCFF095SYT.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF671CAC bigBed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF361GVH 13418897 ENCODE Processing Pipeline 5a6a782330dfffedb266f6e32dc3d677 https://www.encodeproject.org/files/ENCFF671CAC/@@download/ENCFF671CAC.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF625OLM bigBed narrowPeak peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF224KDP 12856391 ENCODE Processing Pipeline e30f06d9b6c15d144d1f3a2132967173 https://www.encodeproject.org/files/ENCFF625OLM/@@download/ENCFF625OLM.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF332TBE bigBed narrowPeak conservative idr thresholded peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF242JAR 418037 ENCODE Processing Pipeline 8953fe397faf5f65835b5583f9ee084e https://www.encodeproject.org/files/ENCFF332TBE/@@download/ENCFF332TBE.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF242JAR bed narrowPeak conservative idr thresholded peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF222SMQ, ENCFF224KDP, ENCFF361GVH 223913 ENCODE Processing Pipeline 7420d4a8ff141a00cae9430d2e26d0be https://www.encodeproject.org/files/ENCFF242JAR/@@download/ENCFF242JAR.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF142TZG bed narrowPeak optimal idr thresholded peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF222SMQ, ENCFF224KDP, ENCFF361GVH 297054 ENCODE Processing Pipeline fe10afd1e58d66ccf4a66a3ebdb7ed17 https://www.encodeproject.org/files/ENCFF142TZG/@@download/ENCFF142TZG.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF965PKS bigBed narrowPeak optimal idr thresholded peaks ENCSR808FFI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-ZKSCAN8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF142TZG 629937 ENCODE Processing Pipeline 0b6e62510643b808229c474cc6fec8f7 https://www.encodeproject.org/files/ENCFF965PKS/@@download/ENCFF965PKS.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF510RGT fastq reads ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1956831973 Richard Myers, HAIB 17faed04c8d09c68b119e70f85ccaf99 SRA:SRR5339553 https://www.encodeproject.org/files/ENCFF510RGT/@@download/ENCFF510RGT.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF713JRT fastq reads ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1870040344 Richard Myers, HAIB c17b583eb892a18f871b4a41daef02d4 SRA:SRR5339552 https://www.encodeproject.org/files/ENCFF713JRT/@@download/ENCFF713JRT.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF040RXW bam unfiltered alignments ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF713JRT 2203910634 ENCODE Processing Pipeline 995a87abbafcb3b477951a27b03f41b8 https://www.encodeproject.org/files/ENCFF040RXW/@@download/ENCFF040RXW.bam GRCh38 released antibody characterized with exemption ENCFF789PFR bam unfiltered alignments ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF510RGT, ENCFF643CGH 2300513853 ENCODE Processing Pipeline eef2dbe1249a96f66f12a989abcb7f7a https://www.encodeproject.org/files/ENCFF789PFR/@@download/ENCFF789PFR.bam GRCh38 released antibody characterized with exemption ENCFF466GOP bam unfiltered alignments ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF713JRT, ENCFF807MUK 2197765239 ENCODE Processing Pipeline 95c546a347e1e70d6651c3ba32a42c63 https://www.encodeproject.org/files/ENCFF466GOP/@@download/ENCFF466GOP.bam hg19 released antibody characterized with exemption ENCFF045UTD bam unfiltered alignments ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF510RGT, ENCFF807MUK 2294090072 ENCODE Processing Pipeline 626c651657f1d473b7bf0ea58a4bf7c8 https://www.encodeproject.org/files/ENCFF045UTD/@@download/ENCFF045UTD.bam hg19 released antibody characterized with exemption ENCFF940MCJ bam alignments ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF713JRT 1707087835 ENCODE Processing Pipeline f4e9a0d824e3098a4f51c2e8079ff939 https://www.encodeproject.org/files/ENCFF940MCJ/@@download/ENCFF940MCJ.bam GRCh38 released antibody characterized with exemption ENCFF557TWG bam alignments ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF510RGT, ENCFF643CGH 1797873794 ENCODE Processing Pipeline 15fdd73d139f9fec60c5b1fb28d7a3bb https://www.encodeproject.org/files/ENCFF557TWG/@@download/ENCFF557TWG.bam GRCh38 released antibody characterized with exemption ENCFF113NRO bam alignments ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF510RGT, ENCFF807MUK 1796487817 ENCODE Processing Pipeline ffb764c332572eb9b35217495e037802 https://www.encodeproject.org/files/ENCFF113NRO/@@download/ENCFF113NRO.bam hg19 released antibody characterized with exemption ENCFF991VFZ bam alignments ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF713JRT, ENCFF807MUK 1705756077 ENCODE Processing Pipeline 5e9ebf01ec017cdd707b258829c6d443 https://www.encodeproject.org/files/ENCFF991VFZ/@@download/ENCFF991VFZ.bam hg19 released antibody characterized with exemption ENCFF096DES bigWig signal p-value ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF940MCJ 609652936 ENCODE Processing Pipeline 3b6e5ae43793f281bd2e4ecc6d16e309 https://www.encodeproject.org/files/ENCFF096DES/@@download/ENCFF096DES.bigWig GRCh38 released antibody characterized with exemption ENCFF596OCA bigWig signal p-value ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF557TWG 628072557 ENCODE Processing Pipeline af0fe1ad3e97af762955b3de1023616a https://www.encodeproject.org/files/ENCFF596OCA/@@download/ENCFF596OCA.bigWig GRCh38 released antibody characterized with exemption ENCFF588BDG bigWig fold change over control ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF557TWG 605515477 ENCODE Processing Pipeline 028f17b32d9b8948b63f659e3c97b9cd https://www.encodeproject.org/files/ENCFF588BDG/@@download/ENCFF588BDG.bigWig GRCh38 released antibody characterized with exemption ENCFF149HPO bigWig fold change over control ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF940MCJ 581297133 ENCODE Processing Pipeline f63a944d87d935e314441908e09307b8 https://www.encodeproject.org/files/ENCFF149HPO/@@download/ENCFF149HPO.bigWig GRCh38 released antibody characterized with exemption ENCFF588TXG bigWig signal p-value ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF557TWG, ENCFF940MCJ 645843564 ENCODE Processing Pipeline 9b0caa655ac91129543dad175fa6735c https://www.encodeproject.org/files/ENCFF588TXG/@@download/ENCFF588TXG.bigWig GRCh38 released antibody characterized with exemption ENCFF412CCL bigWig fold change over control ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF557TWG, ENCFF940MCJ 1012199221 ENCODE Processing Pipeline 31279e7c9892a1b7c87b00e69fef27ec https://www.encodeproject.org/files/ENCFF412CCL/@@download/ENCFF412CCL.bigWig GRCh38 released antibody characterized with exemption ENCFF097JJC bed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF557TWG 5720156 ENCODE Processing Pipeline 2c69f72a3501b3c9996b708011f5a04e https://www.encodeproject.org/files/ENCFF097JJC/@@download/ENCFF097JJC.bed.gz GRCh38 released antibody characterized with exemption ENCFF116ASD bed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF940MCJ 5906026 ENCODE Processing Pipeline 393334c50b7c715c78218bab344c55e4 https://www.encodeproject.org/files/ENCFF116ASD/@@download/ENCFF116ASD.bed.gz GRCh38 released antibody characterized with exemption ENCFF808CAW bed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF557TWG, ENCFF940MCJ 6719400 ENCODE Processing Pipeline 328f8eb6985b9d01b5ca1b75ecb95998 https://www.encodeproject.org/files/ENCFF808CAW/@@download/ENCFF808CAW.bed.gz GRCh38 released antibody characterized with exemption ENCFF727GHV bed narrowPeak optimal idr thresholded peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF097JJC, ENCFF116ASD, ENCFF419RSJ, ENCFF808CAW 246294 ENCODE Processing Pipeline 4d96554e24cca7b2a7c524ed116730de https://www.encodeproject.org/files/ENCFF727GHV/@@download/ENCFF727GHV.bed.gz GRCh38 released antibody characterized with exemption ENCFF402UBG bigBed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF116ASD 13287071 ENCODE Processing Pipeline 18e63c928f205b9cfc92dc14afd0a233 https://www.encodeproject.org/files/ENCFF402UBG/@@download/ENCFF402UBG.bigBed GRCh38 released antibody characterized with exemption ENCFF355NHQ bigBed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF097JJC 13221559 ENCODE Processing Pipeline 78e5f3cbe88c34ce45e5d29423663d9f https://www.encodeproject.org/files/ENCFF355NHQ/@@download/ENCFF355NHQ.bigBed GRCh38 released antibody characterized with exemption ENCFF722XRV bigBed narrowPeak optimal idr thresholded peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF727GHV 460980 ENCODE Processing Pipeline 226de77d9cd538b4fd7670c92f65d00d https://www.encodeproject.org/files/ENCFF722XRV/@@download/ENCFF722XRV.bigBed GRCh38 released antibody characterized with exemption ENCFF878VCV bigBed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF808CAW 13201575 ENCODE Processing Pipeline 4d22fa8329bb960cdf4c6c833be4050d https://www.encodeproject.org/files/ENCFF878VCV/@@download/ENCFF878VCV.bigBed GRCh38 released antibody characterized with exemption ENCFF328KFT bigWig signal p-value ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF113NRO, ENCFF203ABR 1277492759 ENCODE Processing Pipeline 4f82c257b476ad5cfaeda51ba2aceb37 https://www.encodeproject.org/files/ENCFF328KFT/@@download/ENCFF328KFT.bigWig hg19 released antibody characterized with exemption ENCFF326MZJ bigWig signal p-value ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF991VFZ 1190112325 ENCODE Processing Pipeline 03dc33302c1288adc7e3e549e3e32195 https://www.encodeproject.org/files/ENCFF326MZJ/@@download/ENCFF326MZJ.bigWig hg19 released antibody characterized with exemption ENCFF096UET bigWig signal p-value ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF113NRO, ENCFF203ABR, ENCFF991VFZ 1568327534 ENCODE Processing Pipeline 1070ba3af131c7794a6279e68b11f1a3 https://www.encodeproject.org/files/ENCFF096UET/@@download/ENCFF096UET.bigWig hg19 released antibody characterized with exemption ENCFF639OZW bigWig fold change over control ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF113NRO, ENCFF203ABR 1067860099 ENCODE Processing Pipeline d253213e38c215f46122ad9b2b989620 https://www.encodeproject.org/files/ENCFF639OZW/@@download/ENCFF639OZW.bigWig hg19 released antibody characterized with exemption ENCFF529FBK bigWig fold change over control ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF991VFZ 1039085845 ENCODE Processing Pipeline 461a82b65bbbe51f8d51f178bd45b9f6 https://www.encodeproject.org/files/ENCFF529FBK/@@download/ENCFF529FBK.bigWig hg19 released antibody characterized with exemption ENCFF714ZPK bigWig fold change over control ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF113NRO, ENCFF203ABR, ENCFF991VFZ 1616382469 ENCODE Processing Pipeline 2d0ebb7f779ec90f9deb65045fffd3e3 https://www.encodeproject.org/files/ENCFF714ZPK/@@download/ENCFF714ZPK.bigWig hg19 released antibody characterized with exemption ENCFF782XJB bed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF113NRO, ENCFF203ABR 6566527 ENCODE Processing Pipeline a142d19851b7d191bf6d6cc4005174e4 https://www.encodeproject.org/files/ENCFF782XJB/@@download/ENCFF782XJB.bed.gz hg19 released antibody characterized with exemption ENCFF568HFI bed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF991VFZ 6499368 ENCODE Processing Pipeline c8f07aa1611f4435d7510efe46b335d9 https://www.encodeproject.org/files/ENCFF568HFI/@@download/ENCFF568HFI.bed.gz hg19 released antibody characterized with exemption ENCFF920XKN bed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF113NRO, ENCFF203ABR, ENCFF991VFZ 7027618 ENCODE Processing Pipeline d67e1a1942f268f4ac5182d2d1997500 https://www.encodeproject.org/files/ENCFF920XKN/@@download/ENCFF920XKN.bed.gz hg19 released antibody characterized with exemption ENCFF327PZT bigBed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF782XJB 13286611 ENCODE Processing Pipeline 58c19e2aeb240bd7fb9880f57b9e4f1e https://www.encodeproject.org/files/ENCFF327PZT/@@download/ENCFF327PZT.bigBed hg19 released antibody characterized with exemption ENCFF684WOX bigBed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF568HFI 13303362 ENCODE Processing Pipeline 726093939b9d2c729e07d484ae9057f3 https://www.encodeproject.org/files/ENCFF684WOX/@@download/ENCFF684WOX.bigBed hg19 released antibody characterized with exemption ENCFF902AZE bigBed narrowPeak peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF920XKN 13177183 ENCODE Processing Pipeline 885f1aa696e86fb5224488ddc425a8b4 https://www.encodeproject.org/files/ENCFF902AZE/@@download/ENCFF902AZE.bigBed hg19 released antibody characterized with exemption ENCFF636YLF bed narrowPeak conservative idr thresholded peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF568HFI, ENCFF782XJB, ENCFF920XKN 214514 ENCODE Processing Pipeline 6005e19b3100615d715e16a341faa858 https://www.encodeproject.org/files/ENCFF636YLF/@@download/ENCFF636YLF.bed.gz hg19 released antibody characterized with exemption ENCFF406ESR bigBed narrowPeak conservative idr thresholded peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF636YLF 425742 ENCODE Processing Pipeline 707fee66ce0f83469b49a4d2e001e9d8 https://www.encodeproject.org/files/ENCFF406ESR/@@download/ENCFF406ESR.bigBed hg19 released antibody characterized with exemption ENCFF125NZH bed narrowPeak optimal idr thresholded peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF568HFI, ENCFF782XJB, ENCFF920XKN 216562 ENCODE Processing Pipeline eb77510343117a3f2bd682fcfae0e54d https://www.encodeproject.org/files/ENCFF125NZH/@@download/ENCFF125NZH.bed.gz hg19 released antibody characterized with exemption ENCFF046NRO bigBed narrowPeak optimal idr thresholded peaks ENCSR925QAW ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HMG20B-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF125NZH 428099 ENCODE Processing Pipeline a8c0a9aba117a3d6c23adaabc803270d https://www.encodeproject.org/files/ENCFF046NRO/@@download/ENCFF046NRO.bigBed hg19 released antibody characterized with exemption ENCFF348HJC fastq reads ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 1 50 single-ended 2278530743 Richard Myers, HAIB a98eac0d9f42f0e0a9d1925b70625059 SRA:SRR5338919 https://www.encodeproject.org/files/ENCFF348HJC/@@download/ENCFF348HJC.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption ENCFF768KAE fastq reads ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 1 50 single-ended 2084865160 Richard Myers, HAIB 17363d0e9ec712cfea0d749bb27f05ae SRA:SRR5338918 https://www.encodeproject.org/files/ENCFF768KAE/@@download/ENCFF768KAE.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption ENCFF310ION bam unfiltered alignments ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 50 ENCFF643CGH, ENCFF768KAE 2637666419 ENCODE Processing Pipeline f4c9eaeb25cfe17bb797f76fb2d39e73 https://www.encodeproject.org/files/ENCFF310ION/@@download/ENCFF310ION.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF265DXN bam unfiltered alignments ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 50 ENCFF768KAE, ENCFF807MUK 2624495766 ENCODE Processing Pipeline 0adab86779cd66fd98487f3c70fed29c https://www.encodeproject.org/files/ENCFF265DXN/@@download/ENCFF265DXN.bam hg19 released control low read depth, antibody characterized with exemption ENCFF434YLV bam unfiltered alignments ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 50 ENCFF348HJC, ENCFF643CGH 2868295678 ENCODE Processing Pipeline caa9e364fb3d4762faedcc7554080123 https://www.encodeproject.org/files/ENCFF434YLV/@@download/ENCFF434YLV.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF530GUM bam unfiltered alignments ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 50 ENCFF348HJC, ENCFF807MUK 2853428824 ENCODE Processing Pipeline 605e98db712a4b1e0d8c8c6911389bad https://www.encodeproject.org/files/ENCFF530GUM/@@download/ENCFF530GUM.bam hg19 released control low read depth, antibody characterized with exemption ENCFF879CUM bam alignments ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 50 ENCFF643CGH, ENCFF768KAE 1943705307 ENCODE Processing Pipeline d711f398ddf4e9e6bd197a7dcbbda6a9 https://www.encodeproject.org/files/ENCFF879CUM/@@download/ENCFF879CUM.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF207GHC bam alignments ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 50 ENCFF348HJC, ENCFF643CGH 2065635913 ENCODE Processing Pipeline 49f71b47d98cf2c8795fa87303644465 https://www.encodeproject.org/files/ENCFF207GHC/@@download/ENCFF207GHC.bam GRCh38 released control low read depth, antibody characterized with exemption ENCFF629YQB bam alignments ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 50 ENCFF348HJC, ENCFF807MUK 2065181109 ENCODE Processing Pipeline 75a457e2196b9c0c13b827ca87ec948f https://www.encodeproject.org/files/ENCFF629YQB/@@download/ENCFF629YQB.bam hg19 released control low read depth, antibody characterized with exemption ENCFF468OBD bam alignments ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 50 ENCFF768KAE, ENCFF807MUK 1943264764 ENCODE Processing Pipeline f7ce4215b21b56fed3f438a9a44662a8 https://www.encodeproject.org/files/ENCFF468OBD/@@download/ENCFF468OBD.bam hg19 released control low read depth, antibody characterized with exemption ENCFF976PZR bigWig signal p-value ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 ENCFF023YTY, ENCFF468OBD 469740887 ENCODE Processing Pipeline 1e5f0796d4318b6b50157f8622f050f5 https://www.encodeproject.org/files/ENCFF976PZR/@@download/ENCFF976PZR.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF921IRV bigWig signal p-value ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 ENCFF023YTY, ENCFF629YQB 452016123 ENCODE Processing Pipeline c70afaccc1ce7af70e3e5fde5b6cf516 https://www.encodeproject.org/files/ENCFF921IRV/@@download/ENCFF921IRV.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF563ZIL bigWig fold change over control ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 ENCFF023YTY, ENCFF629YQB 775270439 ENCODE Processing Pipeline 6f12ec4a8ac3dfdbd57618ffce15be44 https://www.encodeproject.org/files/ENCFF563ZIL/@@download/ENCFF563ZIL.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF730EXE bigBed narrowPeak conservative idr thresholded peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF421ZII 1701957 ENCODE Processing Pipeline ddcd188ac2373e76819c1b5275b0d7a9 https://www.encodeproject.org/files/ENCFF730EXE/@@download/ENCFF730EXE.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF211XLF bigBed narrowPeak optimal idr thresholded peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF624SFC 1739582 ENCODE Processing Pipeline e56b86380291589fa61f499e1286e750 https://www.encodeproject.org/files/ENCFF211XLF/@@download/ENCFF211XLF.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF071LZO bigWig signal p-value ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF023YTY, ENCFF468OBD, ENCFF629YQB 440694051 ENCODE Processing Pipeline dd1fb675e9b9cfc0ee770208332bf1b9 https://www.encodeproject.org/files/ENCFF071LZO/@@download/ENCFF071LZO.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF583DLB bigWig fold change over control ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 ENCFF023YTY, ENCFF468OBD 763139258 ENCODE Processing Pipeline 12f804b060e8b37ebc42476d2ce8633d https://www.encodeproject.org/files/ENCFF583DLB/@@download/ENCFF583DLB.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF008WCZ bed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 ENCFF023YTY, ENCFF629YQB 5888774 ENCODE Processing Pipeline 578a6084662c612d255a776121ced563 https://www.encodeproject.org/files/ENCFF008WCZ/@@download/ENCFF008WCZ.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF181DWV bed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF023YTY, ENCFF468OBD, ENCFF629YQB 6771537 ENCODE Processing Pipeline 94e6166466cb1fa9d5fa9a99863c3cb7 https://www.encodeproject.org/files/ENCFF181DWV/@@download/ENCFF181DWV.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF960RHW bigBed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 ENCFF145MQM 11671719 ENCODE Processing Pipeline 76231210a73d5928201ffbecfb2661c3 https://www.encodeproject.org/files/ENCFF960RHW/@@download/ENCFF960RHW.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF314GCG bigBed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 ENCFF008WCZ 11806660 ENCODE Processing Pipeline ff3fdd0fdfa780b1741559abc21deef1 https://www.encodeproject.org/files/ENCFF314GCG/@@download/ENCFF314GCG.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF974QJE bigBed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF181DWV 11723103 ENCODE Processing Pipeline 9d01dc844908977681814ed6ec9f3580 https://www.encodeproject.org/files/ENCFF974QJE/@@download/ENCFF974QJE.bigBed hg19 released control low read depth, antibody characterized with exemption ENCFF624SFC bed narrowPeak optimal idr thresholded peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF008WCZ, ENCFF145MQM, ENCFF181DWV 1124836 ENCODE Processing Pipeline 086f8e2fb4fbd272c66b98b384a2ebf8 https://www.encodeproject.org/files/ENCFF624SFC/@@download/ENCFF624SFC.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF652BFV bigWig fold change over control ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF023YTY, ENCFF468OBD, ENCFF629YQB 1324036547 ENCODE Processing Pipeline ae14e299f280a4c9508ad81dc419acad https://www.encodeproject.org/files/ENCFF652BFV/@@download/ENCFF652BFV.bigWig hg19 released control low read depth, antibody characterized with exemption ENCFF145MQM bed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 ENCFF023YTY, ENCFF468OBD 5902959 ENCODE Processing Pipeline 77bd1b15ac7dd3e9806b3b2dc5284cbb https://www.encodeproject.org/files/ENCFF145MQM/@@download/ENCFF145MQM.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF421ZII bed narrowPeak conservative idr thresholded peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF008WCZ, ENCFF145MQM, ENCFF181DWV 1096168 ENCODE Processing Pipeline 53de18133ce94205b8fae6fa2cfd864d https://www.encodeproject.org/files/ENCFF421ZII/@@download/ENCFF421ZII.bed.gz hg19 released control low read depth, antibody characterized with exemption ENCFF056EDB bigWig signal p-value ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 ENCFF582CVJ, ENCFF879CUM 469795275 ENCODE Processing Pipeline 8f29e9dc70d110752d8101530544e70c https://www.encodeproject.org/files/ENCFF056EDB/@@download/ENCFF056EDB.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF217XPM bigWig signal p-value ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF207GHC, ENCFF582CVJ, ENCFF879CUM 440713501 ENCODE Processing Pipeline d5e3f11dbed712e7ca92067d6f898a07 https://www.encodeproject.org/files/ENCFF217XPM/@@download/ENCFF217XPM.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF679PFY bigWig signal p-value ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 ENCFF207GHC, ENCFF582CVJ 452226093 ENCODE Processing Pipeline 2bd852d81ea22026b57ff88b4e4bfe4c https://www.encodeproject.org/files/ENCFF679PFY/@@download/ENCFF679PFY.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF220TCK bigWig fold change over control ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 ENCFF582CVJ, ENCFF879CUM 766070484 ENCODE Processing Pipeline a81eb2ff9f18fe8f7718b2ea819df9bd https://www.encodeproject.org/files/ENCFF220TCK/@@download/ENCFF220TCK.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF422RII bigWig fold change over control ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 ENCFF207GHC, ENCFF582CVJ 789624308 ENCODE Processing Pipeline b3fe655ff90d040fff44bad212760029 https://www.encodeproject.org/files/ENCFF422RII/@@download/ENCFF422RII.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF322CKA bigWig fold change over control ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF207GHC, ENCFF582CVJ, ENCFF879CUM 1320871434 ENCODE Processing Pipeline 667f55b6449e86e065281bc80b5cf18f https://www.encodeproject.org/files/ENCFF322CKA/@@download/ENCFF322CKA.bigWig GRCh38 released control low read depth, antibody characterized with exemption ENCFF715ZHP bed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 ENCFF582CVJ, ENCFF879CUM 5692870 ENCODE Processing Pipeline f480a7dd2e9174ac5d95ba61970a594f https://www.encodeproject.org/files/ENCFF715ZHP/@@download/ENCFF715ZHP.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF811CCD bed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 ENCFF207GHC, ENCFF582CVJ 5681813 ENCODE Processing Pipeline cc34b4f8bdaf62c357ce2d55342e88ba https://www.encodeproject.org/files/ENCFF811CCD/@@download/ENCFF811CCD.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF094PPY bigBed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1 ENCFF715ZHP 11652434 ENCODE Processing Pipeline 386c9ad908137951cb9629518b1d07f4 https://www.encodeproject.org/files/ENCFF094PPY/@@download/ENCFF094PPY.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF044HQV bed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF207GHC, ENCFF582CVJ, ENCFF879CUM 6730595 ENCODE Processing Pipeline 28b452302347576b3190e0994b7e2971 https://www.encodeproject.org/files/ENCFF044HQV/@@download/ENCFF044HQV.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF332BAY bigBed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 2 ENCFF811CCD 11786514 ENCODE Processing Pipeline 3699c01c2b13cada1698b039a61cfa4c https://www.encodeproject.org/files/ENCFF332BAY/@@download/ENCFF332BAY.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF168UMN bigBed narrowPeak conservative idr thresholded peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF659XDV 1738250 ENCODE Processing Pipeline 090b9b1fa87b309d527256298d725e28 https://www.encodeproject.org/files/ENCFF168UMN/@@download/ENCFF168UMN.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF751HOF bigBed narrowPeak peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF044HQV 11806936 ENCODE Processing Pipeline 60333db486c6d430a49d540bfcb682a4 https://www.encodeproject.org/files/ENCFF751HOF/@@download/ENCFF751HOF.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF659XDV bed narrowPeak conservative idr thresholded peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF044HQV, ENCFF419RSJ, ENCFF715ZHP, ENCFF811CCD 1123619 ENCODE Processing Pipeline 8deaef51dc9421908e8be809a3ff0479 https://www.encodeproject.org/files/ENCFF659XDV/@@download/ENCFF659XDV.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF714AST bigBed narrowPeak optimal idr thresholded peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF685UQE 1775197 ENCODE Processing Pipeline 2757971bc2fbdc565d8e3c43fe3572a0 https://www.encodeproject.org/files/ENCFF714AST/@@download/ENCFF714AST.bigBed GRCh38 released control low read depth, antibody characterized with exemption ENCFF685UQE bed narrowPeak optimal idr thresholded peaks ENCSR528PSI ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-HLF-human ENCAB697XQW DNA False 2016-10-12 ENCODE 1, 2 ENCFF044HQV, ENCFF419RSJ, ENCFF715ZHP, ENCFF811CCD 1152225 ENCODE Processing Pipeline 1572fafb06abe1db5e3105487428d84e https://www.encodeproject.org/files/ENCFF685UQE/@@download/ENCFF685UQE.bed.gz GRCh38 released control low read depth, antibody characterized with exemption ENCFF707YEY fastq reads ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1197363446 Richard Myers, HAIB 54fb36174eb9adff002d3c232bbebc38 SRA:SRR5338695 https://www.encodeproject.org/files/ENCFF707YEY/@@download/ENCFF707YEY.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF690UNT fastq reads ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 889716012 Richard Myers, HAIB 390aaef09d878a74c0b770281b2273d2 SRA:SRR5338696 https://www.encodeproject.org/files/ENCFF690UNT/@@download/ENCFF690UNT.fastq.gz HiSeq 2000 /files/ENCFF434SPH/ released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF352OYX bam alignments ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF707YEY, ENCFF807MUK 1023716075 ENCODE Processing Pipeline ed60c5d9d6efc627e9cc39fbc261d2fe https://www.encodeproject.org/files/ENCFF352OYX/@@download/ENCFF352OYX.bam hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF069NTQ bam alignments ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF690UNT, ENCFF807MUK 756925775 ENCODE Processing Pipeline 7f41d85f8de80becef44fd328366101f https://www.encodeproject.org/files/ENCFF069NTQ/@@download/ENCFF069NTQ.bam hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF182LOA bigWig signal p-value ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF352OYX 446321873 ENCODE Processing Pipeline c42eedd8fa3ea6dfaae39a8764f20df9 https://www.encodeproject.org/files/ENCFF182LOA/@@download/ENCFF182LOA.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF732UOQ bigWig signal p-value ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF069NTQ, ENCFF352OYX 424030130 ENCODE Processing Pipeline 29da6a782e1b89c9ee5d5a4b4493fd18 https://www.encodeproject.org/files/ENCFF732UOQ/@@download/ENCFF732UOQ.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF187BTJ bigWig fold change over control ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF069NTQ 325504982 ENCODE Processing Pipeline 8f21023ab408a3bfda4c395792303200 https://www.encodeproject.org/files/ENCFF187BTJ/@@download/ENCFF187BTJ.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF176TOU bigWig fold change over control ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF069NTQ, ENCFF352OYX 648501781 ENCODE Processing Pipeline ab1a52a21c688086a75edac31f5585b8 https://www.encodeproject.org/files/ENCFF176TOU/@@download/ENCFF176TOU.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF209UJF bigWig signal p-value ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF069NTQ 425657505 ENCODE Processing Pipeline c77d49bf15377c8195d805f760bc2d50 https://www.encodeproject.org/files/ENCFF209UJF/@@download/ENCFF209UJF.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF775VAP bed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF352OYX 6212491 ENCODE Processing Pipeline 8196829fa410b15e8c254dff080cfe10 https://www.encodeproject.org/files/ENCFF775VAP/@@download/ENCFF775VAP.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF935PRS bed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF023YTY, ENCFF069NTQ, ENCFF352OYX 6943622 ENCODE Processing Pipeline fd47e29ec66dbe683c284f15d578f8e7 https://www.encodeproject.org/files/ENCFF935PRS/@@download/ENCFF935PRS.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF712NGV bigWig fold change over control ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF023YTY, ENCFF352OYX 410316631 ENCODE Processing Pipeline b6e264d899e701f96ec235861c132502 https://www.encodeproject.org/files/ENCFF712NGV/@@download/ENCFF712NGV.bigWig hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF151CJE bed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF023YTY, ENCFF069NTQ 6233914 ENCODE Processing Pipeline efc1bdb15baed8bec34c5f06ea5db5be https://www.encodeproject.org/files/ENCFF151CJE/@@download/ENCFF151CJE.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF163MMS bigBed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF151CJE 12885878 ENCODE Processing Pipeline 4c7461c734d2104bc7db79ca68e73f7a https://www.encodeproject.org/files/ENCFF163MMS/@@download/ENCFF163MMS.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF505CJK bigBed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF935PRS 12801493 ENCODE Processing Pipeline 4630d3c0436e08cff6d07d7885dc63bc https://www.encodeproject.org/files/ENCFF505CJK/@@download/ENCFF505CJK.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF880NBS bigBed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF775VAP 12933831 ENCODE Processing Pipeline a149ad90604072286b30d99d49d233fe https://www.encodeproject.org/files/ENCFF880NBS/@@download/ENCFF880NBS.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF837HCH bed narrowPeak optimal idr thresholded peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF151CJE, ENCFF775VAP, ENCFF935PRS 199892 ENCODE Processing Pipeline 612b5357f838579f884e20cfc9b356d4 https://www.encodeproject.org/files/ENCFF837HCH/@@download/ENCFF837HCH.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF526PZV bed narrowPeak conservative idr thresholded peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF151CJE, ENCFF775VAP, ENCFF935PRS 199897 ENCODE Processing Pipeline 4276164eb96a61e109253f1b44ca3f49 https://www.encodeproject.org/files/ENCFF526PZV/@@download/ENCFF526PZV.bed.gz hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF719SXS bigBed narrowPeak conservative idr thresholded peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF837HCH 442819 ENCODE Processing Pipeline 211e96fed9f19b75c56a8fe0655dfd1c https://www.encodeproject.org/files/ENCFF719SXS/@@download/ENCFF719SXS.bigBed hg19 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF249FGE bam unfiltered alignments ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF643CGH, ENCFF690UNT 992565150 ENCODE Processing Pipeline 9b0c54e3469e46fb7af5b29cdce36191 https://www.encodeproject.org/files/ENCFF249FGE/@@download/ENCFF249FGE.bam GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF915XNP bam unfiltered alignments ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF707YEY 1334555087 ENCODE Processing Pipeline c1c87e2c482b8d399158b6742c803100 https://www.encodeproject.org/files/ENCFF915XNP/@@download/ENCFF915XNP.bam GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF615LVR bam alignments ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF643CGH, ENCFF690UNT 756800422 ENCODE Processing Pipeline 16bbd4de275c304010b5761499dc233d https://www.encodeproject.org/files/ENCFF615LVR/@@download/ENCFF615LVR.bam GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF056OXH bam alignments ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF643CGH, ENCFF707YEY 1023651194 ENCODE Processing Pipeline 9b9eb61b5a9bf0a00ad2dc080da68712 https://www.encodeproject.org/files/ENCFF056OXH/@@download/ENCFF056OXH.bam GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF520CHU bigWig signal p-value ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF056OXH, ENCFF582CVJ 449471313 ENCODE Processing Pipeline 77568279e1a6378d0722a803b1cf054c https://www.encodeproject.org/files/ENCFF520CHU/@@download/ENCFF520CHU.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF575KND bigWig signal p-value ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF615LVR 366259508 ENCODE Processing Pipeline 7708e942de5e17f036679cd61a10fe38 https://www.encodeproject.org/files/ENCFF575KND/@@download/ENCFF575KND.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF401IJL bigWig signal p-value ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF056OXH, ENCFF582CVJ, ENCFF615LVR 436957568 ENCODE Processing Pipeline ebbabc89751ed5b97629d3fc88f90fd1 https://www.encodeproject.org/files/ENCFF401IJL/@@download/ENCFF401IJL.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF156PYW bigWig fold change over control ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF056OXH, ENCFF582CVJ 418677774 ENCODE Processing Pipeline bba3fde37db7f3e953170242605d715f https://www.encodeproject.org/files/ENCFF156PYW/@@download/ENCFF156PYW.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF831DBN bigWig fold change over control ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF615LVR 322218609 ENCODE Processing Pipeline 1e227122586f1a7a8278b7804709ab87 https://www.encodeproject.org/files/ENCFF831DBN/@@download/ENCFF831DBN.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF883ZNP bigWig fold change over control ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF056OXH, ENCFF582CVJ, ENCFF615LVR 660235030 ENCODE Processing Pipeline fbe99da1b5fc39d72c59456e11236dfc https://www.encodeproject.org/files/ENCFF883ZNP/@@download/ENCFF883ZNP.bigWig GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF486YML bed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF056OXH, ENCFF582CVJ 5981301 ENCODE Processing Pipeline f6b958c27d30c38fc998474cbb93cbe6 https://www.encodeproject.org/files/ENCFF486YML/@@download/ENCFF486YML.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF722VYE bigBed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF486YML 12921232 ENCODE Processing Pipeline c878c14764d9326d006de02e331132ef https://www.encodeproject.org/files/ENCFF722VYE/@@download/ENCFF722VYE.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF198PJR bigBed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF587LPA 12846694 ENCODE Processing Pipeline 74f6f59aee609ff478f7ed4f62be5959 https://www.encodeproject.org/files/ENCFF198PJR/@@download/ENCFF198PJR.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF587LPA bed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF582CVJ, ENCFF615LVR 5929131 ENCODE Processing Pipeline f9e9e4a5ba93d322d7bd5a2beed77e7b https://www.encodeproject.org/files/ENCFF587LPA/@@download/ENCFF587LPA.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF446OZF bed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF056OXH, ENCFF582CVJ, ENCFF615LVR 6804947 ENCODE Processing Pipeline b5c65c336dad6eace5b2a39da777eaf4 https://www.encodeproject.org/files/ENCFF446OZF/@@download/ENCFF446OZF.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF515DUD bed narrowPeak optimal idr thresholded peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF446OZF, ENCFF486YML, ENCFF587LPA 203461 ENCODE Processing Pipeline 26760894aa3b4e6921f5ef6f075c235f https://www.encodeproject.org/files/ENCFF515DUD/@@download/ENCFF515DUD.bed.gz GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF638KXW bigBed narrowPeak peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF446OZF 12805220 ENCODE Processing Pipeline 6be28d6ee0451220cb15359950cb1c6c https://www.encodeproject.org/files/ENCFF638KXW/@@download/ENCFF638KXW.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF096ZRI bigBed narrowPeak optimal idr thresholded peaks ENCSR396QWK ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-MBD1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF515DUD 449119 ENCODE Processing Pipeline 50f3a6f064f13081aa67b26731b9adbf https://www.encodeproject.org/files/ENCFF096ZRI/@@download/ENCFF096ZRI.bigBed GRCh38 released control low read depth, antibody characterized with exemption, low read depth missing unfiltered alignments ENCFF495VRD fastq reads ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2341742411 Richard Myers, HAIB cf251b957f552916dfb33219650f6c42 SRA:SRR5331267 https://www.encodeproject.org/files/ENCFF495VRD/@@download/ENCFF495VRD.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF461VNE fastq reads ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2202635441 Richard Myers, HAIB 1466b3cb19d494a6ba1e27a546f64e10 SRA:SRR5331266 https://www.encodeproject.org/files/ENCFF461VNE/@@download/ENCFF461VNE.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF381BDQ bam unfiltered alignments ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF461VNE, ENCFF807MUK 2408607560 ENCODE Processing Pipeline 617c5e72695f2650acf4e13213775947 https://www.encodeproject.org/files/ENCFF381BDQ/@@download/ENCFF381BDQ.bam hg19 released antibody characterized with exemption ENCFF024FCT bam unfiltered alignments ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF495VRD, ENCFF643CGH 2539029664 ENCODE Processing Pipeline 53dc202fc578babe6e9a54fa78f07544 https://www.encodeproject.org/files/ENCFF024FCT/@@download/ENCFF024FCT.bam GRCh38 released antibody characterized with exemption ENCFF077ZGC bam unfiltered alignments ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF461VNE, ENCFF643CGH 2413618933 ENCODE Processing Pipeline f6eb76a30df5e0e3c3ff43358fbfb77c https://www.encodeproject.org/files/ENCFF077ZGC/@@download/ENCFF077ZGC.bam GRCh38 released antibody characterized with exemption ENCFF533AUS bam unfiltered alignments ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF495VRD, ENCFF807MUK 2533346572 ENCODE Processing Pipeline 4eee7c4de7ac7850804e521fad7869bf https://www.encodeproject.org/files/ENCFF533AUS/@@download/ENCFF533AUS.bam hg19 released antibody characterized with exemption ENCFF670MUB bam alignments ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF461VNE, ENCFF807MUK 1770531430 ENCODE Processing Pipeline e597e1e0439f95c72ca235d124f41efb https://www.encodeproject.org/files/ENCFF670MUB/@@download/ENCFF670MUB.bam hg19 released antibody characterized with exemption ENCFF273QQZ bam alignments ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF495VRD, ENCFF643CGH 1861821574 ENCODE Processing Pipeline bb0d1cdf94958a8c5ba93c84ef71f1ca https://www.encodeproject.org/files/ENCFF273QQZ/@@download/ENCFF273QQZ.bam GRCh38 released antibody characterized with exemption ENCFF603ETF bam alignments ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF461VNE, ENCFF643CGH 1771557652 ENCODE Processing Pipeline a173fce46d34f265a46328563740879a https://www.encodeproject.org/files/ENCFF603ETF/@@download/ENCFF603ETF.bam GRCh38 released antibody characterized with exemption ENCFF925MJO bam alignments ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF495VRD, ENCFF807MUK 1860643328 ENCODE Processing Pipeline 350f4b0b0fe6f1f21c2bcaa7c1144dbf https://www.encodeproject.org/files/ENCFF925MJO/@@download/ENCFF925MJO.bam hg19 released antibody characterized with exemption ENCFF820MLL bigWig signal p-value ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF603ETF 658731133 ENCODE Processing Pipeline 162c014b14254ea69b4781d1b67b0e10 https://www.encodeproject.org/files/ENCFF820MLL/@@download/ENCFF820MLL.bigWig GRCh38 released antibody characterized with exemption ENCFF027FLU bigWig signal p-value ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF273QQZ 664561323 ENCODE Processing Pipeline a907df1a14ebcf0bc34584591cfe57cd https://www.encodeproject.org/files/ENCFF027FLU/@@download/ENCFF027FLU.bigWig GRCh38 released antibody characterized with exemption ENCFF598EOR bigWig signal p-value ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF273QQZ, ENCFF603ETF 658870860 ENCODE Processing Pipeline 900bcc1a302ef438eabd10cb359750d2 https://www.encodeproject.org/files/ENCFF598EOR/@@download/ENCFF598EOR.bigWig GRCh38 released antibody characterized with exemption ENCFF737WWY bigWig fold change over control ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF603ETF 655957613 ENCODE Processing Pipeline e1de135ad1a7800fd68a678271a6e955 https://www.encodeproject.org/files/ENCFF737WWY/@@download/ENCFF737WWY.bigWig GRCh38 released antibody characterized with exemption ENCFF686DMW bigWig fold change over control ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF273QQZ 681646017 ENCODE Processing Pipeline c6d8ea1111e5632a03ef1e60e62bdf70 https://www.encodeproject.org/files/ENCFF686DMW/@@download/ENCFF686DMW.bigWig GRCh38 released antibody characterized with exemption ENCFF308CRA bigWig fold change over control ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF273QQZ, ENCFF603ETF 1082174373 ENCODE Processing Pipeline fdad0eb54279bcb9ceaccb801774f14f https://www.encodeproject.org/files/ENCFF308CRA/@@download/ENCFF308CRA.bigWig GRCh38 released antibody characterized with exemption ENCFF649RIC bed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF603ETF 6329413 ENCODE Processing Pipeline 55d253a417b0979106bac7f0d702390f https://www.encodeproject.org/files/ENCFF649RIC/@@download/ENCFF649RIC.bed.gz GRCh38 released antibody characterized with exemption ENCFF972DSX bed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF273QQZ, ENCFF603ETF 6997147 ENCODE Processing Pipeline 62db2cde6fee0a148cd6d9a67ddfd856 https://www.encodeproject.org/files/ENCFF972DSX/@@download/ENCFF972DSX.bed.gz GRCh38 released antibody characterized with exemption ENCFF585GIM bed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF273QQZ 6471943 ENCODE Processing Pipeline 9ef53c5ba110e263def9f6546365b3b3 https://www.encodeproject.org/files/ENCFF585GIM/@@download/ENCFF585GIM.bed.gz GRCh38 released antibody characterized with exemption ENCFF397OLK bigBed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF649RIC 13013613 ENCODE Processing Pipeline 53f66ca5899cc00a40c427f25286e510 https://www.encodeproject.org/files/ENCFF397OLK/@@download/ENCFF397OLK.bigBed GRCh38 released antibody characterized with exemption ENCFF650FZH bigBed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF972DSX 12942332 ENCODE Processing Pipeline a1f9eb9931ea4a2aa99e516f2e373a85 https://www.encodeproject.org/files/ENCFF650FZH/@@download/ENCFF650FZH.bigBed GRCh38 released antibody characterized with exemption ENCFF383SRB bigBed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF585GIM 13031135 ENCODE Processing Pipeline c3af7828f158e7cda634f73ba7be88d3 https://www.encodeproject.org/files/ENCFF383SRB/@@download/ENCFF383SRB.bigBed GRCh38 released antibody characterized with exemption ENCFF469QQF bed narrowPeak conservative idr thresholded peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF585GIM, ENCFF649RIC, ENCFF972DSX 441527 ENCODE Processing Pipeline e5c24989f2fd4ac47a3a76aff3c60b87 https://www.encodeproject.org/files/ENCFF469QQF/@@download/ENCFF469QQF.bed.gz GRCh38 released antibody characterized with exemption ENCFF887AMF bigBed narrowPeak optimal idr thresholded peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF928HFL 914928 ENCODE Processing Pipeline 7acbe63dee911bfee3e6d20bd8bd5bcd https://www.encodeproject.org/files/ENCFF887AMF/@@download/ENCFF887AMF.bigBed GRCh38 released antibody characterized with exemption ENCFF425PGW bigBed narrowPeak conservative idr thresholded peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF469QQF 893034 ENCODE Processing Pipeline dd2c924da5c3a21c978eb064be114c8c https://www.encodeproject.org/files/ENCFF425PGW/@@download/ENCFF425PGW.bigBed GRCh38 released antibody characterized with exemption ENCFF928HFL bed narrowPeak optimal idr thresholded peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF585GIM, ENCFF649RIC, ENCFF972DSX 456196 ENCODE Processing Pipeline 94c632a986adaf2a46df75539c5ebc74 https://www.encodeproject.org/files/ENCFF928HFL/@@download/ENCFF928HFL.bed.gz GRCh38 released antibody characterized with exemption ENCFF512XHX bigWig signal p-value ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF670MUB 1403800851 ENCODE Processing Pipeline a3bc4ad598f1030020ee566d4475fb7b https://www.encodeproject.org/files/ENCFF512XHX/@@download/ENCFF512XHX.bigWig hg19 released antibody characterized with exemption ENCFF626WRM bigWig signal p-value ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF925MJO 1302901717 ENCODE Processing Pipeline c90d6506edc14b442dde4d1f3bd549a8 https://www.encodeproject.org/files/ENCFF626WRM/@@download/ENCFF626WRM.bigWig hg19 released antibody characterized with exemption ENCFF422OCC bigWig signal p-value ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF670MUB, ENCFF925MJO 1439840001 ENCODE Processing Pipeline 4f2212f8973574bc5702ad3bd090775b https://www.encodeproject.org/files/ENCFF422OCC/@@download/ENCFF422OCC.bigWig hg19 released antibody characterized with exemption ENCFF104SIU bigWig fold change over control ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF670MUB 1166963836 ENCODE Processing Pipeline a5c952134caef9adbea88d23b1d26b9b https://www.encodeproject.org/files/ENCFF104SIU/@@download/ENCFF104SIU.bigWig hg19 released antibody characterized with exemption ENCFF028RSM bigWig fold change over control ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF925MJO 1232448730 ENCODE Processing Pipeline b8249a6d6b1ab920adf5f9d384ac9a66 https://www.encodeproject.org/files/ENCFF028RSM/@@download/ENCFF028RSM.bigWig hg19 released antibody characterized with exemption ENCFF941UWE bigWig fold change over control ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF670MUB, ENCFF925MJO 1776285974 ENCODE Processing Pipeline 23c3b8b6cc570bee73e23570c2302a90 https://www.encodeproject.org/files/ENCFF941UWE/@@download/ENCFF941UWE.bigWig hg19 released antibody characterized with exemption ENCFF663WHF bed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF670MUB 6947945 ENCODE Processing Pipeline 1edc9092c9d332f70fbe3123ddfef3f1 https://www.encodeproject.org/files/ENCFF663WHF/@@download/ENCFF663WHF.bed.gz hg19 released antibody characterized with exemption ENCFF243QDS bed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF925MJO 6947536 ENCODE Processing Pipeline fdad4a1cea0d49aae152ffd49f80c00b https://www.encodeproject.org/files/ENCFF243QDS/@@download/ENCFF243QDS.bed.gz hg19 released antibody characterized with exemption ENCFF582ZDR bed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF670MUB, ENCFF925MJO 7106902 ENCODE Processing Pipeline 03f06c1ea6d2790be4b17ed67c8c0bf6 https://www.encodeproject.org/files/ENCFF582ZDR/@@download/ENCFF582ZDR.bed.gz hg19 released antibody characterized with exemption ENCFF531UDW bigBed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF663WHF 12994842 ENCODE Processing Pipeline 92554383b58556bbb745d63475b1faa6 https://www.encodeproject.org/files/ENCFF531UDW/@@download/ENCFF531UDW.bigBed hg19 released antibody characterized with exemption ENCFF890RCU bigBed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF243QDS 12971543 ENCODE Processing Pipeline 9f83e0fdcc3e6493d6e1993c045d992f https://www.encodeproject.org/files/ENCFF890RCU/@@download/ENCFF890RCU.bigBed hg19 released antibody characterized with exemption ENCFF392VXZ bed narrowPeak conservative idr thresholded peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF243QDS, ENCFF582ZDR, ENCFF663WHF 431086 ENCODE Processing Pipeline c0ea1b79d0137b6d7b60a5557dda6b2b https://www.encodeproject.org/files/ENCFF392VXZ/@@download/ENCFF392VXZ.bed.gz hg19 released antibody characterized with exemption ENCFF538XTC bigBed narrowPeak peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF582ZDR 12829118 ENCODE Processing Pipeline 5fb197522468d120339218d1a430418a https://www.encodeproject.org/files/ENCFF538XTC/@@download/ENCFF538XTC.bigBed hg19 released antibody characterized with exemption ENCFF070GNA bed narrowPeak optimal idr thresholded peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF243QDS, ENCFF582ZDR, ENCFF663WHF 440040 ENCODE Processing Pipeline 2388abbaa0be740ac7c78b9956bb48c9 https://www.encodeproject.org/files/ENCFF070GNA/@@download/ENCFF070GNA.bed.gz hg19 released antibody characterized with exemption ENCFF189RZZ bigBed narrowPeak conservative idr thresholded peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF392VXZ 890885 ENCODE Processing Pipeline 45ff1d23aaf73309d4caced0b123ad78 https://www.encodeproject.org/files/ENCFF189RZZ/@@download/ENCFF189RZZ.bigBed hg19 released antibody characterized with exemption ENCFF292LNS bigBed narrowPeak optimal idr thresholded peaks ENCSR108TYQ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GATAD1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF070GNA 904142 ENCODE Processing Pipeline 71950b1cd3940b8654fa472f02192704 https://www.encodeproject.org/files/ENCFF292LNS/@@download/ENCFF292LNS.bigBed hg19 released antibody characterized with exemption ENCFF104LBO fastq reads ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2252466044 Richard Myers, HAIB c5016aecc4efc8c07dcb6e658fcff703 SRA:SRR5338740 https://www.encodeproject.org/files/ENCFF104LBO/@@download/ENCFF104LBO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF079HKK fastq reads ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1341793539 Richard Myers, HAIB c194e102d8155e86343780b6f840a465 SRA:SRR5338739 https://www.encodeproject.org/files/ENCFF079HKK/@@download/ENCFF079HKK.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF380EDB bam unfiltered alignments ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF079HKK, ENCFF643CGH 1492572407 ENCODE Processing Pipeline 166124972b87376c088af84aeb49cd00 https://www.encodeproject.org/files/ENCFF380EDB/@@download/ENCFF380EDB.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF954JMY bam unfiltered alignments ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF079HKK, ENCFF807MUK 1490538410 ENCODE Processing Pipeline f867143cb62cfd268fcd2e7527950aa1 https://www.encodeproject.org/files/ENCFF954JMY/@@download/ENCFF954JMY.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF077HRE bam unfiltered alignments ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF104LBO, ENCFF643CGH 2306524121 ENCODE Processing Pipeline 7181a20085d1f12c1172710465733915 https://www.encodeproject.org/files/ENCFF077HRE/@@download/ENCFF077HRE.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF113ZJZ bam unfiltered alignments ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF104LBO, ENCFF807MUK 2302998033 ENCODE Processing Pipeline f36356155832721cee9b842bc6a850fb https://www.encodeproject.org/files/ENCFF113ZJZ/@@download/ENCFF113ZJZ.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF266WEU bam alignments ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF079HKK, ENCFF807MUK 1094047767 ENCODE Processing Pipeline fe9e4e03de9dd3359a7617176e6b2499 https://www.encodeproject.org/files/ENCFF266WEU/@@download/ENCFF266WEU.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF700ZPS bam alignments ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF079HKK, ENCFF643CGH 1094508671 ENCODE Processing Pipeline bffc1dcc18fe208b6eed3e189c87cc82 https://www.encodeproject.org/files/ENCFF700ZPS/@@download/ENCFF700ZPS.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF731EZN bam alignments ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF104LBO, ENCFF643CGH 1328334836 ENCODE Processing Pipeline e854bf86eebeff0f1d4d8fa32951423a https://www.encodeproject.org/files/ENCFF731EZN/@@download/ENCFF731EZN.bam GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF462CGH bam alignments ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF104LBO, ENCFF807MUK 1327560380 ENCODE Processing Pipeline 67f6cc38b26fe696b5567676f02dbba0 https://www.encodeproject.org/files/ENCFF462CGH/@@download/ENCFF462CGH.bam hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF653OBK bigWig signal p-value ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF700ZPS 476629867 ENCODE Processing Pipeline e2b94e19f6cdded76a772fbd010966d3 https://www.encodeproject.org/files/ENCFF653OBK/@@download/ENCFF653OBK.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF499DNY bigWig signal p-value ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF700ZPS, ENCFF731EZN 657405608 ENCODE Processing Pipeline 80beb6135fd753424085de14ad3232f5 https://www.encodeproject.org/files/ENCFF499DNY/@@download/ENCFF499DNY.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF517XPS bigWig fold change over control ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF700ZPS 438751933 ENCODE Processing Pipeline 3113dfc261a03bde1cea81cbba2eb441 https://www.encodeproject.org/files/ENCFF517XPS/@@download/ENCFF517XPS.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF629OYH bigWig signal p-value ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF731EZN 602566254 ENCODE Processing Pipeline babadde800314d1e01c72685083d563d https://www.encodeproject.org/files/ENCFF629OYH/@@download/ENCFF629OYH.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF166DJT bigWig fold change over control ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF731EZN 500685023 ENCODE Processing Pipeline d2dba90b72f6804cc848490791e49324 https://www.encodeproject.org/files/ENCFF166DJT/@@download/ENCFF166DJT.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF556AXQ bigWig fold change over control ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF700ZPS, ENCFF731EZN 787431378 ENCODE Processing Pipeline e94b997a10f57649610b741855c1a806 https://www.encodeproject.org/files/ENCFF556AXQ/@@download/ENCFF556AXQ.bigWig GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF309FWP bed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF700ZPS 6099570 ENCODE Processing Pipeline ab7ac684b978b45474d715d38fc9afc3 https://www.encodeproject.org/files/ENCFF309FWP/@@download/ENCFF309FWP.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF815OFB bed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF731EZN 6750490 ENCODE Processing Pipeline 636059d3183d63e75f8374903f508d2a https://www.encodeproject.org/files/ENCFF815OFB/@@download/ENCFF815OFB.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF442MTJ bigBed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF796JXJ 12603786 ENCODE Processing Pipeline af3e4cecddcac0b4dd57898423250810 https://www.encodeproject.org/files/ENCFF442MTJ/@@download/ENCFF442MTJ.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF472UCD bigBed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF309FWP 12953524 ENCODE Processing Pipeline 711de442dcfc7dd087d06cc0f70bc96f https://www.encodeproject.org/files/ENCFF472UCD/@@download/ENCFF472UCD.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF723WQN bigBed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF815OFB 12477506 ENCODE Processing Pipeline 89130531e7d49d1b78330edc7cd85226 https://www.encodeproject.org/files/ENCFF723WQN/@@download/ENCFF723WQN.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF796JXJ bed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF700ZPS, ENCFF731EZN 6980923 ENCODE Processing Pipeline 1f48bb78e11c286c9fe444630c437596 https://www.encodeproject.org/files/ENCFF796JXJ/@@download/ENCFF796JXJ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF882PRQ bed narrowPeak conservative idr thresholded peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF309FWP, ENCFF419RSJ, ENCFF796JXJ, ENCFF815OFB 528086 ENCODE Processing Pipeline d34382b75d753b17e1530f12e6db22be https://www.encodeproject.org/files/ENCFF882PRQ/@@download/ENCFF882PRQ.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF627ZUO bigBed narrowPeak conservative idr thresholded peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF882PRQ 1239072 ENCODE Processing Pipeline 65a636697b53c90aee970315cb10733c https://www.encodeproject.org/files/ENCFF627ZUO/@@download/ENCFF627ZUO.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF635OBU bigBed narrowPeak optimal idr thresholded peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF744IUB 1593531 ENCODE Processing Pipeline ec310464edd533f6fcae65795f291589 https://www.encodeproject.org/files/ENCFF635OBU/@@download/ENCFF635OBU.bigBed GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF744IUB bed narrowPeak optimal idr thresholded peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF309FWP, ENCFF419RSJ, ENCFF796JXJ, ENCFF815OFB 718635 ENCODE Processing Pipeline 5f957550161e58b2f87473f0e0cdf9d5 https://www.encodeproject.org/files/ENCFF744IUB/@@download/ENCFF744IUB.bed.gz GRCh38 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF666ZBL bigWig signal p-value ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF462CGH 1179959961 ENCODE Processing Pipeline 813a7844b47c297fd5ea8a2430498594 https://www.encodeproject.org/files/ENCFF666ZBL/@@download/ENCFF666ZBL.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF529DWP bigWig signal p-value ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF266WEU 1200407551 ENCODE Processing Pipeline 2d4f9dd8ca4e16f14788cb225a4b1b14 https://www.encodeproject.org/files/ENCFF529DWP/@@download/ENCFF529DWP.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF315YUC bigWig signal p-value ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF266WEU, ENCFF462CGH 1581935045 ENCODE Processing Pipeline a474e0b180e95d0e6c46d879a3f6a287 https://www.encodeproject.org/files/ENCFF315YUC/@@download/ENCFF315YUC.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF013UOW bigWig fold change over control ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF266WEU 823323735 ENCODE Processing Pipeline 226509409c6b9a8fadc5d092d3661958 https://www.encodeproject.org/files/ENCFF013UOW/@@download/ENCFF013UOW.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF611BWT bigWig fold change over control ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF462CGH 979983366 ENCODE Processing Pipeline bac8f9c64f271d9d36ee93ac357a58b6 https://www.encodeproject.org/files/ENCFF611BWT/@@download/ENCFF611BWT.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF613JIZ bigWig fold change over control ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF266WEU, ENCFF462CGH 1363802997 ENCODE Processing Pipeline 92237e69afd6f9cbf7618d108e72bb16 https://www.encodeproject.org/files/ENCFF613JIZ/@@download/ENCFF613JIZ.bigWig hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF375BJW bed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF462CGH 6930500 ENCODE Processing Pipeline 41dad94b847528dce40daaaf72e39dd3 https://www.encodeproject.org/files/ENCFF375BJW/@@download/ENCFF375BJW.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF072FFV bed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF266WEU 6563094 ENCODE Processing Pipeline a7be5bebea49db48046ddbd54fcef2e2 https://www.encodeproject.org/files/ENCFF072FFV/@@download/ENCFF072FFV.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF625FHX bed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF266WEU, ENCFF462CGH 7031087 ENCODE Processing Pipeline 7aaa6ad4b29bb1972ac181255c0a6d67 https://www.encodeproject.org/files/ENCFF625FHX/@@download/ENCFF625FHX.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF836GXI bigBed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF072FFV 12847150 ENCODE Processing Pipeline 8a34ce44bf1d1143928a7a3715b4b9fb https://www.encodeproject.org/files/ENCFF836GXI/@@download/ENCFF836GXI.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF543JMS bigBed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF625FHX 12484016 ENCODE Processing Pipeline 6f49931a5fb71e8eb6847674f9c35742 https://www.encodeproject.org/files/ENCFF543JMS/@@download/ENCFF543JMS.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF623IXJ bigBed narrowPeak peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF375BJW 12282833 ENCODE Processing Pipeline ccdd5858a72448be99123989c2e29247 https://www.encodeproject.org/files/ENCFF623IXJ/@@download/ENCFF623IXJ.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF984GAR bed narrowPeak conservative idr thresholded peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF072FFV, ENCFF375BJW, ENCFF625FHX 556633 ENCODE Processing Pipeline 3796824bd193a66312dfd73c9d79e28a https://www.encodeproject.org/files/ENCFF984GAR/@@download/ENCFF984GAR.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF804MOQ bed narrowPeak optimal idr thresholded peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF072FFV, ENCFF375BJW, ENCFF625FHX 724401 ENCODE Processing Pipeline 984433876181a9d2f67ba18a34ab4cbb https://www.encodeproject.org/files/ENCFF804MOQ/@@download/ENCFF804MOQ.bed.gz hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF816DFM bigBed narrowPeak conservative idr thresholded peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF984GAR 1262732 ENCODE Processing Pipeline f33c38b3330989ca1a65149bb2cb9823 https://www.encodeproject.org/files/ENCFF816DFM/@@download/ENCFF816DFM.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF399FBI bigBed narrowPeak optimal idr thresholded peaks ENCSR462KYU ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-GABPB1-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF804MOQ 1590342 ENCODE Processing Pipeline f778804602aec5cf10cf475e3be30c62 https://www.encodeproject.org/files/ENCFF399FBI/@@download/ENCFF399FBI.bigBed hg19 released antibody characterized with exemption, mild to moderate bottlenecking, moderate library complexity ENCFF675YZO fastq reads ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1670580275 Richard Myers, HAIB d10d78264c7973899d8c334a2bf91865 SRA:SRR5338736 https://www.encodeproject.org/files/ENCFF675YZO/@@download/ENCFF675YZO.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF805RHK fastq reads ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1691414768 Richard Myers, HAIB d86fd5bfe4f1c6ec91367e0b5ede1815 SRA:SRR5338735 https://www.encodeproject.org/files/ENCFF805RHK/@@download/ENCFF805RHK.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF238HYZ bam unfiltered alignments ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF805RHK 1966869587 ENCODE Processing Pipeline f4bdf1c3ff254916b177f9c1284039b5 https://www.encodeproject.org/files/ENCFF238HYZ/@@download/ENCFF238HYZ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF093LZD bam unfiltered alignments ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF675YZO 2005959372 ENCODE Processing Pipeline 91aec1dc6b208ca4be6ee83781bb8e76 https://www.encodeproject.org/files/ENCFF093LZD/@@download/ENCFF093LZD.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF515UJH bam unfiltered alignments ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF675YZO, ENCFF807MUK 2000008934 ENCODE Processing Pipeline 5d8462a7c1a7f53c40764b6351310951 https://www.encodeproject.org/files/ENCFF515UJH/@@download/ENCFF515UJH.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF275CBR bam unfiltered alignments ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF805RHK, ENCFF807MUK 1963070885 ENCODE Processing Pipeline 3d95ae24e687867f8e692fcd117aa93f https://www.encodeproject.org/files/ENCFF275CBR/@@download/ENCFF275CBR.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF793TUM bam alignments ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF805RHK 1527686828 ENCODE Processing Pipeline 29649e878989a5f1345859929c943cc3 https://www.encodeproject.org/files/ENCFF793TUM/@@download/ENCFF793TUM.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF626RYW bam alignments ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF675YZO 1520005155 ENCODE Processing Pipeline a74b69415811475ed3297101129c4b78 https://www.encodeproject.org/files/ENCFF626RYW/@@download/ENCFF626RYW.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF397BSD bam alignments ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF675YZO, ENCFF807MUK 1518687912 ENCODE Processing Pipeline 41468a2b3feb7f4a003697b8fef531c6 https://www.encodeproject.org/files/ENCFF397BSD/@@download/ENCFF397BSD.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF738WIY bam alignments ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF805RHK, ENCFF807MUK 1527130406 ENCODE Processing Pipeline d7d72237624ce5b3e765928ad6b39ae9 https://www.encodeproject.org/files/ENCFF738WIY/@@download/ENCFF738WIY.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF326GYT bigWig signal p-value ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF793TUM 711804861 ENCODE Processing Pipeline b7da9de1a098824d723e9dfbfe381cd4 https://www.encodeproject.org/files/ENCFF326GYT/@@download/ENCFF326GYT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF034NUN bigWig signal p-value ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF626RYW 627703212 ENCODE Processing Pipeline 875659a1df6200df944a98794e196fe5 https://www.encodeproject.org/files/ENCFF034NUN/@@download/ENCFF034NUN.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF510GXL bigWig fold change over control ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF626RYW 561603479 ENCODE Processing Pipeline a9033825dc56100e617b2ee01ed213df https://www.encodeproject.org/files/ENCFF510GXL/@@download/ENCFF510GXL.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF390FNX bigWig fold change over control ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF793TUM 596157279 ENCODE Processing Pipeline a8fe5092063516b37f9b0dcd343963b8 https://www.encodeproject.org/files/ENCFF390FNX/@@download/ENCFF390FNX.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF716VRZ bigWig signal p-value ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF626RYW, ENCFF793TUM 678533894 ENCODE Processing Pipeline 43a8351c77d3297965e0fa3e26b63b20 https://www.encodeproject.org/files/ENCFF716VRZ/@@download/ENCFF716VRZ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF231BNU bigWig fold change over control ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF626RYW, ENCFF793TUM 972014450 ENCODE Processing Pipeline caa99e3067bcb9d26523a897283d1d63 https://www.encodeproject.org/files/ENCFF231BNU/@@download/ENCFF231BNU.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF320HFM bed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF626RYW 5161795 ENCODE Processing Pipeline 30884ff2a738df5fee93a825e6cf76fe https://www.encodeproject.org/files/ENCFF320HFM/@@download/ENCFF320HFM.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF868IGH bed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF793TUM 6437374 ENCODE Processing Pipeline dd07ce3fa6e876f669d2cb8b6edd5a24 https://www.encodeproject.org/files/ENCFF868IGH/@@download/ENCFF868IGH.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF004ECM bed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF626RYW, ENCFF793TUM 6744457 ENCODE Processing Pipeline d321567e429495bb79f5fb0ea32a5726 https://www.encodeproject.org/files/ENCFF004ECM/@@download/ENCFF004ECM.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF025WRB bigBed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF320HFM 11209853 ENCODE Processing Pipeline 896ff872d2577c20f4bdec88a3047cf7 https://www.encodeproject.org/files/ENCFF025WRB/@@download/ENCFF025WRB.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF431WJV bigBed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF004ECM 13222149 ENCODE Processing Pipeline 9ebfbc77c428da0af8d38d7cb68ea6f7 https://www.encodeproject.org/files/ENCFF431WJV/@@download/ENCFF431WJV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF935EJT bigBed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF868IGH 13044787 ENCODE Processing Pipeline 75b4334d7b1ca6a29dbfd2d3b2d5bd4f https://www.encodeproject.org/files/ENCFF935EJT/@@download/ENCFF935EJT.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF740UST bed narrowPeak conservative idr thresholded peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF004ECM, ENCFF320HFM, ENCFF419RSJ, ENCFF868IGH 210849 ENCODE Processing Pipeline 8ba0b52d833e3fa006869f411745a79a https://www.encodeproject.org/files/ENCFF740UST/@@download/ENCFF740UST.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF997MQD bigBed narrowPeak conservative idr thresholded peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF740UST 498003 ENCODE Processing Pipeline 07cf7434483ac795324411cd4e4e24e1 https://www.encodeproject.org/files/ENCFF997MQD/@@download/ENCFF997MQD.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF671MXD bed narrowPeak optimal idr thresholded peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF004ECM, ENCFF320HFM, ENCFF419RSJ, ENCFF868IGH 294163 ENCODE Processing Pipeline 3b4ab9045a00281242b5dd777b634fb0 https://www.encodeproject.org/files/ENCFF671MXD/@@download/ENCFF671MXD.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF055TYB bigBed narrowPeak optimal idr thresholded peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF671MXD 634459 ENCODE Processing Pipeline 4a0b92de0b36db9909ce286dece9962b https://www.encodeproject.org/files/ENCFF055TYB/@@download/ENCFF055TYB.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF471BTX bigWig signal p-value ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF397BSD 1303043680 ENCODE Processing Pipeline c47c4f9cfa8cfa0c9719c3f46e19b847 https://www.encodeproject.org/files/ENCFF471BTX/@@download/ENCFF471BTX.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF515CFH bigWig signal p-value ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF738WIY 1399526376 ENCODE Processing Pipeline d04996640b686a551af86b48d4beab96 https://www.encodeproject.org/files/ENCFF515CFH/@@download/ENCFF515CFH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF007GSA bigWig signal p-value ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF397BSD, ENCFF738WIY 1521452975 ENCODE Processing Pipeline e4cc65b400b744c7cd5a63d276b126d6 https://www.encodeproject.org/files/ENCFF007GSA/@@download/ENCFF007GSA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF019GAY bigWig fold change over control ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF397BSD 1043355759 ENCODE Processing Pipeline 899ecf07123f0ec470993ce8b37f17c8 https://www.encodeproject.org/files/ENCFF019GAY/@@download/ENCFF019GAY.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF299LXH bigWig fold change over control ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF738WIY 1136001855 ENCODE Processing Pipeline 9cdba7ae90bcfc778a6df8d38e3fa9c8 https://www.encodeproject.org/files/ENCFF299LXH/@@download/ENCFF299LXH.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF025ZTI bigWig fold change over control ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF397BSD, ENCFF738WIY 1608898741 ENCODE Processing Pipeline 4aa09a43484f39d731868b79369beb4e https://www.encodeproject.org/files/ENCFF025ZTI/@@download/ENCFF025ZTI.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF591FQI bed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF397BSD 6105818 ENCODE Processing Pipeline 2f6fe382a6ba4a993806f34e06efcff8 https://www.encodeproject.org/files/ENCFF591FQI/@@download/ENCFF591FQI.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF268UTN bed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF738WIY 6950099 ENCODE Processing Pipeline 75cf7572bfed1e5a80a131daf9d885d9 https://www.encodeproject.org/files/ENCFF268UTN/@@download/ENCFF268UTN.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF148YIQ bed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF397BSD, ENCFF738WIY 7142248 ENCODE Processing Pipeline ebe8edbddc82fef19f2742b01faf6078 https://www.encodeproject.org/files/ENCFF148YIQ/@@download/ENCFF148YIQ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF812MCC bigBed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF591FQI 11447688 ENCODE Processing Pipeline 130498601423750f49c26a9ecf8b77b9 https://www.encodeproject.org/files/ENCFF812MCC/@@download/ENCFF812MCC.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF748QKT bigBed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF268UTN 13090697 ENCODE Processing Pipeline 3f8fdce18ef89b5f2f321d6491c7593b https://www.encodeproject.org/files/ENCFF748QKT/@@download/ENCFF748QKT.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF614IMW bed narrowPeak conservative idr thresholded peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF148YIQ, ENCFF268UTN, ENCFF591FQI 209328 ENCODE Processing Pipeline 67084dd59ad5a65829a072076067b721 https://www.encodeproject.org/files/ENCFF614IMW/@@download/ENCFF614IMW.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF311TIA bigBed narrowPeak peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF148YIQ 13244005 ENCODE Processing Pipeline 6eb3b294f2ffd698d613fde96f779a80 https://www.encodeproject.org/files/ENCFF311TIA/@@download/ENCFF311TIA.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF507VOM bigBed narrowPeak conservative idr thresholded peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF614IMW 420315 ENCODE Processing Pipeline 5541d1c0060fa31ed259a0bc7efef535 https://www.encodeproject.org/files/ENCFF507VOM/@@download/ENCFF507VOM.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF665HTJ bed narrowPeak optimal idr thresholded peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF148YIQ, ENCFF268UTN, ENCFF591FQI 278865 ENCODE Processing Pipeline 81d97c0e755012706e3cd0c23fdc0f0c https://www.encodeproject.org/files/ENCFF665HTJ/@@download/ENCFF665HTJ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF032CXU bigBed narrowPeak optimal idr thresholded peaks ENCSR430JGJ ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-THRB-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF665HTJ 632879 ENCODE Processing Pipeline a3f98d468dac2c70a753563e7e3767ae https://www.encodeproject.org/files/ENCFF032CXU/@@download/ENCFF032CXU.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF444VXB fastq reads ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1424430661 Richard Myers, HAIB a30eb74a9bb664d077719d5edc543152 SRA:SRR5331338 https://www.encodeproject.org/files/ENCFF444VXB/@@download/ENCFF444VXB.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption missing unfiltered alignments ENCFF148LLM fastq reads ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 949258970 Richard Myers, HAIB 7eb8e18050aa09affa4673093b507e06 SRA:SRR5331339 https://www.encodeproject.org/files/ENCFF148LLM/@@download/ENCFF148LLM.fastq.gz HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption missing unfiltered alignments ENCFF837QKV bam alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF148LLM, ENCFF807MUK 823240766 ENCODE Processing Pipeline 619184733e70810c450003543a87cbd0 https://www.encodeproject.org/files/ENCFF837QKV/@@download/ENCFF837QKV.bam hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF447TYF bam alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF444VXB, ENCFF807MUK 1228720682 ENCODE Processing Pipeline d143a470edb4f209f216e736148a3fe6 https://www.encodeproject.org/files/ENCFF447TYF/@@download/ENCFF447TYF.bam hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF665DEC bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF447TYF 818307379 ENCODE Processing Pipeline b7bcace9977feb12400659cc6f2dc27e https://www.encodeproject.org/files/ENCFF665DEC/@@download/ENCFF665DEC.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF034UVN bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF837QKV 692121119 ENCODE Processing Pipeline c62788d22895a531ea664494f6327314 https://www.encodeproject.org/files/ENCFF034UVN/@@download/ENCFF034UVN.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF659EGI bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF447TYF, ENCFF837QKV 982271092 ENCODE Processing Pipeline c29f87f10da103d2a62c0daf7fa448cc https://www.encodeproject.org/files/ENCFF659EGI/@@download/ENCFF659EGI.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF869DSO bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF447TYF 691060708 ENCODE Processing Pipeline 0cccdbbb5876832042a891a8b51a16fb https://www.encodeproject.org/files/ENCFF869DSO/@@download/ENCFF869DSO.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF901VBK bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF837QKV 520838732 ENCODE Processing Pipeline 16107d557cf83dfdd9f58b13c9c6b6cd https://www.encodeproject.org/files/ENCFF901VBK/@@download/ENCFF901VBK.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF145VGS bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF447TYF, ENCFF837QKV 1014669057 ENCODE Processing Pipeline 82ae224bdfa99b2942489016e158ce83 https://www.encodeproject.org/files/ENCFF145VGS/@@download/ENCFF145VGS.bigWig hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF551NSK bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF089SHU 11669879 ENCODE Processing Pipeline d9002da885e85f58e5a91eb5d50cbc82 https://www.encodeproject.org/files/ENCFF551NSK/@@download/ENCFF551NSK.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF948LKX bed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF089SHU, ENCFF189NGD, ENCFF624BVW 61161 ENCODE Processing Pipeline 6bf4211ebb28bb585bfed486973ea06c https://www.encodeproject.org/files/ENCFF948LKX/@@download/ENCFF948LKX.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF030HWZ bed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF089SHU, ENCFF189NGD, ENCFF624BVW 67700 ENCODE Processing Pipeline 31e9c7f935021b20bb5a136f5eb5d3e0 https://www.encodeproject.org/files/ENCFF030HWZ/@@download/ENCFF030HWZ.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF189NGD bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF837QKV 4759023 ENCODE Processing Pipeline 886ecf5439e7455261cced5fc2c31058 https://www.encodeproject.org/files/ENCFF189NGD/@@download/ENCFF189NGD.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF624BVW bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF447TYF 5039056 ENCODE Processing Pipeline e1727509e123689203fbeea3fbb815b8 https://www.encodeproject.org/files/ENCFF624BVW/@@download/ENCFF624BVW.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF991VTY bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF624BVW 11158550 ENCODE Processing Pipeline a79f6aa2c62bbddb5b97dd684bfec63b https://www.encodeproject.org/files/ENCFF991VTY/@@download/ENCFF991VTY.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF035SSG bigBed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF948LKX 166040 ENCODE Processing Pipeline a63a39fee248b5c1ce4d389bc69bfcb8 https://www.encodeproject.org/files/ENCFF035SSG/@@download/ENCFF035SSG.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF089SHU bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF447TYF, ENCFF837QKV 5945369 ENCODE Processing Pipeline f27db7e818966d03ddf8bbf524186d49 https://www.encodeproject.org/files/ENCFF089SHU/@@download/ENCFF089SHU.bed.gz hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF389TPP bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF189NGD 11128592 ENCODE Processing Pipeline b6e5bcb3efe74e28ec5f90e2c430af19 https://www.encodeproject.org/files/ENCFF389TPP/@@download/ENCFF389TPP.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF012AHM bigBed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF030HWZ 175269 ENCODE Processing Pipeline bc5229eea6797ee8f82bd4ef01a5a2cf https://www.encodeproject.org/files/ENCFF012AHM/@@download/ENCFF012AHM.bigBed hg19 released antibody characterized with exemption missing unfiltered alignments ENCFF120BPS bam unfiltered alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF148LLM, ENCFF643CGH 1085338929 ENCODE Processing Pipeline 2b0b18ed70277418069b62c2e1e669f2 https://www.encodeproject.org/files/ENCFF120BPS/@@download/ENCFF120BPS.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF485ERR bam unfiltered alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF444VXB, ENCFF643CGH 1629386249 ENCODE Processing Pipeline 79b7c7f4fda16d0700a87794d022fa7e https://www.encodeproject.org/files/ENCFF485ERR/@@download/ENCFF485ERR.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF515YFJ bam alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF148LLM, ENCFF643CGH 822971267 ENCODE Processing Pipeline 64f6784e055c1386a57c0d0a6b6b9b7a https://www.encodeproject.org/files/ENCFF515YFJ/@@download/ENCFF515YFJ.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF780DBH bam alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF444VXB, ENCFF643CGH 1228517931 ENCODE Processing Pipeline 73e313caca794c1a227168bdfba7ce93 https://www.encodeproject.org/files/ENCFF780DBH/@@download/ENCFF780DBH.bam GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF285JRI bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF332SVJ, ENCFF780DBH 769550741 ENCODE Processing Pipeline 5438033e27abc8f685209532dd422be3 https://www.encodeproject.org/files/ENCFF285JRI/@@download/ENCFF285JRI.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF488MSR bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF332SVJ, ENCFF515YFJ 739350011 ENCODE Processing Pipeline 04939564d73798786c9d97b1b6dfddfe https://www.encodeproject.org/files/ENCFF488MSR/@@download/ENCFF488MSR.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF953TOA bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF332SVJ, ENCFF515YFJ, ENCFF780DBH 983930397 ENCODE Processing Pipeline 7e22ed8246219011fd4300e03ba4c18d https://www.encodeproject.org/files/ENCFF953TOA/@@download/ENCFF953TOA.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF171JNY bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF332SVJ, ENCFF780DBH 700648508 ENCODE Processing Pipeline 081b25efdab0f791f0a16b723032fdd3 https://www.encodeproject.org/files/ENCFF171JNY/@@download/ENCFF171JNY.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF452EXE bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF332SVJ, ENCFF515YFJ 529306262 ENCODE Processing Pipeline 469002d20c13c2913061fc356e622ed8 https://www.encodeproject.org/files/ENCFF452EXE/@@download/ENCFF452EXE.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF278PDS bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF332SVJ, ENCFF515YFJ, ENCFF780DBH 1013486550 ENCODE Processing Pipeline 68c90d23a22bb4c9407bdcf665b582ab https://www.encodeproject.org/files/ENCFF278PDS/@@download/ENCFF278PDS.bigWig GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF522YTF bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF332SVJ, ENCFF780DBH 4783025 ENCODE Processing Pipeline 996eed7efbed03b85dcddfb59399286a https://www.encodeproject.org/files/ENCFF522YTF/@@download/ENCFF522YTF.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF217XJC bigBed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF715PLB 173216 ENCODE Processing Pipeline 7990f17d421b086c32ae971436ac0cac https://www.encodeproject.org/files/ENCFF217XJC/@@download/ENCFF217XJC.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF313YNI bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF332SVJ, ENCFF515YFJ, ENCFF780DBH 5665303 ENCODE Processing Pipeline e3738c7722a7a14f582bf9e13eff43c0 https://www.encodeproject.org/files/ENCFF313YNI/@@download/ENCFF313YNI.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF929LAL bigBed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF539RBU 167266 ENCODE Processing Pipeline ec5938c3625897d9b48bc0c6df40b784 https://www.encodeproject.org/files/ENCFF929LAL/@@download/ENCFF929LAL.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF644UJA bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF332SVJ, ENCFF515YFJ 4434443 ENCODE Processing Pipeline 7b187a58788511e2c520599628303b57 https://www.encodeproject.org/files/ENCFF644UJA/@@download/ENCFF644UJA.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF924IKO bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF522YTF 11061793 ENCODE Processing Pipeline 366369880c7b25304fe908262989d458 https://www.encodeproject.org/files/ENCFF924IKO/@@download/ENCFF924IKO.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF676NKZ bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF644UJA 10868759 ENCODE Processing Pipeline 54973137108c1e3aa25e3ee886d2ad11 https://www.encodeproject.org/files/ENCFF676NKZ/@@download/ENCFF676NKZ.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF834FKS bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF313YNI 11648082 ENCODE Processing Pipeline 1e28f2899f250009580ef0ad134fcf07 https://www.encodeproject.org/files/ENCFF834FKS/@@download/ENCFF834FKS.bigBed GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF539RBU bed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF313YNI, ENCFF419RSJ, ENCFF522YTF, ENCFF644UJA 60685 ENCODE Processing Pipeline 4b8f00ffef20199a9dadd77f65ea9203 https://www.encodeproject.org/files/ENCFF539RBU/@@download/ENCFF539RBU.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF715PLB bed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 immortalized cell line adult female 53 year Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF313YNI, ENCFF419RSJ, ENCFF522YTF, ENCFF644UJA 64654 ENCODE Processing Pipeline a7aecaf01e510d88609e18f39450c557 https://www.encodeproject.org/files/ENCFF715PLB/@@download/ENCFF715PLB.bed.gz GRCh38 released antibody characterized with exemption missing unfiltered alignments ENCFF679POI fastq reads ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1968224759 Richard Myers, HAIB da619ed7a765e419ef88c966679b6ed8 SRA:SRR5339631 https://www.encodeproject.org/files/ENCFF679POI/@@download/ENCFF679POI.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF695OMH fastq reads ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1260334589 Richard Myers, HAIB f3756bd78dfb9608ecd040c3ee42390a SRA:SRR5339632 https://www.encodeproject.org/files/ENCFF695OMH/@@download/ENCFF695OMH.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF319QGL bam unfiltered alignments ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF695OMH 1465295380 ENCODE Processing Pipeline 03076994aaedc4092b443fa9cfd820a9 https://www.encodeproject.org/files/ENCFF319QGL/@@download/ENCFF319QGL.bam GRCh38 released antibody characterized with exemption ENCFF883KKU bam unfiltered alignments ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF679POI 2245197483 ENCODE Processing Pipeline ef7380f749909bb7a9d1d96f87a96b47 https://www.encodeproject.org/files/ENCFF883KKU/@@download/ENCFF883KKU.bam GRCh38 released antibody characterized with exemption ENCFF942OZW bam unfiltered alignments ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF679POI, ENCFF807MUK 2240960744 ENCODE Processing Pipeline 17ff1cdecb33d244d8d1f364c59aefb3 https://www.encodeproject.org/files/ENCFF942OZW/@@download/ENCFF942OZW.bam hg19 released antibody characterized with exemption ENCFF791PQR bam unfiltered alignments ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF695OMH, ENCFF807MUK 1462890601 ENCODE Processing Pipeline 8716bf841b3a82e5e19c08b7985ab19b https://www.encodeproject.org/files/ENCFF791PQR/@@download/ENCFF791PQR.bam hg19 released antibody characterized with exemption ENCFF417XBC bam alignments ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF695OMH, ENCFF807MUK 1121702001 ENCODE Processing Pipeline afde1dd84bdf224df11c6c3ffee34005 https://www.encodeproject.org/files/ENCFF417XBC/@@download/ENCFF417XBC.bam hg19 released antibody characterized with exemption ENCFF705PYY bam alignments ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF695OMH 1122028182 ENCODE Processing Pipeline 10e662ffe2618d88b4902ec4b1c5ee5b https://www.encodeproject.org/files/ENCFF705PYY/@@download/ENCFF705PYY.bam GRCh38 released antibody characterized with exemption ENCFF469ZEQ bam alignments ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF679POI 1682109846 ENCODE Processing Pipeline 5bb486f87582f518c7e1733baac4c455 https://www.encodeproject.org/files/ENCFF469ZEQ/@@download/ENCFF469ZEQ.bam GRCh38 released antibody characterized with exemption ENCFF970GQA bam alignments ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF679POI, ENCFF807MUK 1681515612 ENCODE Processing Pipeline 4a6930001b3514c4f63e1d617cde69ca https://www.encodeproject.org/files/ENCFF970GQA/@@download/ENCFF970GQA.bam hg19 released antibody characterized with exemption ENCFF025KIM bigWig signal p-value ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF705PYY 521905348 ENCODE Processing Pipeline e1e0f4b9e72d8501789473209b176fd9 https://www.encodeproject.org/files/ENCFF025KIM/@@download/ENCFF025KIM.bigWig GRCh38 released antibody characterized with exemption ENCFF486JQK bigWig signal p-value ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF469ZEQ 632555774 ENCODE Processing Pipeline 660466ab6333f2492bbd47cfb416a29b https://www.encodeproject.org/files/ENCFF486JQK/@@download/ENCFF486JQK.bigWig GRCh38 released antibody characterized with exemption ENCFF069DUV bigWig signal p-value ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF469ZEQ, ENCFF705PYY 655272705 ENCODE Processing Pipeline a0641d9dd4d177ca91924c01089a498f https://www.encodeproject.org/files/ENCFF069DUV/@@download/ENCFF069DUV.bigWig GRCh38 released antibody characterized with exemption ENCFF355XGV bigWig fold change over control ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF469ZEQ 611704550 ENCODE Processing Pipeline fdaf82ebc18b0c3f04182c8377c5cfcc https://www.encodeproject.org/files/ENCFF355XGV/@@download/ENCFF355XGV.bigWig GRCh38 released antibody characterized with exemption ENCFF036CCE bigWig fold change over control ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF705PYY 454528046 ENCODE Processing Pipeline ba4e0f5a752dd04c8aa715d20ae77d5a https://www.encodeproject.org/files/ENCFF036CCE/@@download/ENCFF036CCE.bigWig GRCh38 released antibody characterized with exemption ENCFF656USH bigWig fold change over control ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF469ZEQ, ENCFF705PYY 862870737 ENCODE Processing Pipeline 38aedfb9c148cbe50800678706b6acd1 https://www.encodeproject.org/files/ENCFF656USH/@@download/ENCFF656USH.bigWig GRCh38 released antibody characterized with exemption ENCFF403DJY bed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF469ZEQ 6709201 ENCODE Processing Pipeline 2f9b21b71001585a90c5b3d72e50dcf8 https://www.encodeproject.org/files/ENCFF403DJY/@@download/ENCFF403DJY.bed.gz GRCh38 released antibody characterized with exemption ENCFF606SUB bed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF705PYY 6431489 ENCODE Processing Pipeline a05c09efec04e966066148a63adf229d https://www.encodeproject.org/files/ENCFF606SUB/@@download/ENCFF606SUB.bed.gz GRCh38 released antibody characterized with exemption ENCFF216KWF bigBed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF403DJY 12794411 ENCODE Processing Pipeline 77bd754fd632b05dad926a5f118d609b https://www.encodeproject.org/files/ENCFF216KWF/@@download/ENCFF216KWF.bigBed GRCh38 released antibody characterized with exemption ENCFF078YZS bed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF469ZEQ, ENCFF705PYY 6986349 ENCODE Processing Pipeline dc85907f949c8b72550d380b6d0e52a8 https://www.encodeproject.org/files/ENCFF078YZS/@@download/ENCFF078YZS.bed.gz GRCh38 released antibody characterized with exemption ENCFF527IMX bigBed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF606SUB 12875240 ENCODE Processing Pipeline 34b8b83b52661c5c7f629e47a957d46b https://www.encodeproject.org/files/ENCFF527IMX/@@download/ENCFF527IMX.bigBed GRCh38 released antibody characterized with exemption ENCFF876YRS bigBed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF078YZS 12729742 ENCODE Processing Pipeline 62b991fec59014ea669ee2443e555ffb https://www.encodeproject.org/files/ENCFF876YRS/@@download/ENCFF876YRS.bigBed GRCh38 released antibody characterized with exemption ENCFF862MKQ bed narrowPeak conservative idr thresholded peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF078YZS, ENCFF403DJY, ENCFF419RSJ, ENCFF606SUB 600678 ENCODE Processing Pipeline ea65262bcfa4facf1ac2466ab085a6dd https://www.encodeproject.org/files/ENCFF862MKQ/@@download/ENCFF862MKQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF235HCL bigBed narrowPeak conservative idr thresholded peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF862MKQ 1104276 ENCODE Processing Pipeline c430db6caafaa10e3202cd8e8dce6c4f https://www.encodeproject.org/files/ENCFF235HCL/@@download/ENCFF235HCL.bigBed GRCh38 released antibody characterized with exemption ENCFF197YSM bed narrowPeak optimal idr thresholded peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF078YZS, ENCFF403DJY, ENCFF419RSJ, ENCFF606SUB 621967 ENCODE Processing Pipeline a95aa10071b351ed0a0d5557a46372fa https://www.encodeproject.org/files/ENCFF197YSM/@@download/ENCFF197YSM.bed.gz GRCh38 released antibody characterized with exemption ENCFF875EWZ bigBed narrowPeak optimal idr thresholded peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF197YSM 1135695 ENCODE Processing Pipeline 08c83db2e5a0623b432e9f46de11220d https://www.encodeproject.org/files/ENCFF875EWZ/@@download/ENCFF875EWZ.bigBed GRCh38 released antibody characterized with exemption ENCFF481KEP bigWig signal p-value ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF970GQA 1351608576 ENCODE Processing Pipeline 0c3632bbb5bce5d50a45268b4acb938b https://www.encodeproject.org/files/ENCFF481KEP/@@download/ENCFF481KEP.bigWig hg19 released antibody characterized with exemption ENCFF607PUF bigWig signal p-value ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF417XBC 1279538875 ENCODE Processing Pipeline 4b0e8116b1e064733c36cc826550af4e https://www.encodeproject.org/files/ENCFF607PUF/@@download/ENCFF607PUF.bigWig hg19 released antibody characterized with exemption ENCFF153OOU bigWig fold change over control ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF970GQA 1133517661 ENCODE Processing Pipeline a4373ff61e34524bb889135b8088c983 https://www.encodeproject.org/files/ENCFF153OOU/@@download/ENCFF153OOU.bigWig hg19 released antibody characterized with exemption ENCFF844LVJ bigWig signal p-value ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF417XBC, ENCFF970GQA 1423428986 ENCODE Processing Pipeline 41a7cba466ca94d8959bf19cacb2c076 https://www.encodeproject.org/files/ENCFF844LVJ/@@download/ENCFF844LVJ.bigWig hg19 released antibody characterized with exemption ENCFF748URG bigWig fold change over control ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF417XBC 878876842 ENCODE Processing Pipeline 6ac9e15fb2cb33a420d6856dbfa8751a https://www.encodeproject.org/files/ENCFF748URG/@@download/ENCFF748URG.bigWig hg19 released antibody characterized with exemption ENCFF423MHO bigWig fold change over control ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF417XBC, ENCFF970GQA 1503015039 ENCODE Processing Pipeline e8c8af262d2670fd50b7649b197c1da1 https://www.encodeproject.org/files/ENCFF423MHO/@@download/ENCFF423MHO.bigWig hg19 released antibody characterized with exemption ENCFF633NDL bed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF970GQA 6994768 ENCODE Processing Pipeline 2031eefbc0bb88d75c2dc831948b219a https://www.encodeproject.org/files/ENCFF633NDL/@@download/ENCFF633NDL.bed.gz hg19 released antibody characterized with exemption ENCFF270JUJ bed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF417XBC 6818984 ENCODE Processing Pipeline 3b84347ef6235c67c6f755c8595d890c https://www.encodeproject.org/files/ENCFF270JUJ/@@download/ENCFF270JUJ.bed.gz hg19 released antibody characterized with exemption ENCFF636XFC bed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF417XBC, ENCFF970GQA 7093294 ENCODE Processing Pipeline 1f676afab5af12aec215f43ce1d6cf31 https://www.encodeproject.org/files/ENCFF636XFC/@@download/ENCFF636XFC.bed.gz hg19 released antibody characterized with exemption ENCFF141STE bigBed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF270JUJ 12741238 ENCODE Processing Pipeline e5972c5a85867419b7f3841dc003238e https://www.encodeproject.org/files/ENCFF141STE/@@download/ENCFF141STE.bigBed hg19 released antibody characterized with exemption ENCFF242MZA bigBed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF633NDL 12749150 ENCODE Processing Pipeline 3f4878378953561a4e7197a414045406 https://www.encodeproject.org/files/ENCFF242MZA/@@download/ENCFF242MZA.bigBed hg19 released antibody characterized with exemption ENCFF054JNI bed narrowPeak conservative idr thresholded peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF270JUJ, ENCFF633NDL, ENCFF636XFC 610568 ENCODE Processing Pipeline 8fb8ddb481cd5db196beac39cfabaead https://www.encodeproject.org/files/ENCFF054JNI/@@download/ENCFF054JNI.bed.gz hg19 released antibody characterized with exemption ENCFF780SVO bigBed narrowPeak peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF636XFC 12709160 ENCODE Processing Pipeline 7ec3accbbe0d9ddb033edee479eac541 https://www.encodeproject.org/files/ENCFF780SVO/@@download/ENCFF780SVO.bigBed hg19 released antibody characterized with exemption ENCFF456KPI bigBed narrowPeak conservative idr thresholded peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF054JNI 1139369 ENCODE Processing Pipeline 7af886cebbe6c6af8ea85e00c551622f https://www.encodeproject.org/files/ENCFF456KPI/@@download/ENCFF456KPI.bigBed hg19 released antibody characterized with exemption ENCFF795SAO bed narrowPeak optimal idr thresholded peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF270JUJ, ENCFF633NDL, ENCFF636XFC 627113 ENCODE Processing Pipeline 2b35628d81e8c08f99d885f9ae251cc7 https://www.encodeproject.org/files/ENCFF795SAO/@@download/ENCFF795SAO.bed.gz hg19 released antibody characterized with exemption ENCFF782PPD bigBed narrowPeak optimal idr thresholded peaks ENCSR954KIC ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KAT8-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF795SAO 1163449 ENCODE Processing Pipeline 49060d9eb57f7101d6eecb164045dc16 https://www.encodeproject.org/files/ENCFF782PPD/@@download/ENCFF782PPD.bigBed hg19 released antibody characterized with exemption ENCFF599YZI fastq reads ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1391716431 Richard Myers, HAIB b6fe0b02756b86dae7ba6e7aa2a0b3e5 SRA:SRR5331152 https://www.encodeproject.org/files/ENCFF599YZI/@@download/ENCFF599YZI.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF767XIJ fastq reads ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 1170413894 Richard Myers, HAIB eeb12868244db6f337a792749353114e SRA:SRR5331153 https://www.encodeproject.org/files/ENCFF767XIJ/@@download/ENCFF767XIJ.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption, low read depth ENCFF963EMV bam unfiltered alignments ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF767XIJ 1284594318 ENCODE Processing Pipeline df5acc4107ff05d7a87708abddb726f7 https://www.encodeproject.org/files/ENCFF963EMV/@@download/ENCFF963EMV.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF204ZMI bam unfiltered alignments ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF767XIJ, ENCFF807MUK 1281616199 ENCODE Processing Pipeline 17f31a2efb5e11c9f412bdfda25905b6 https://www.encodeproject.org/files/ENCFF204ZMI/@@download/ENCFF204ZMI.bam hg19 released antibody characterized with exemption, low read depth ENCFF197CJL bam unfiltered alignments ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF599YZI, ENCFF807MUK 1518634697 ENCODE Processing Pipeline 532b3d6fb2e67afdfe1675bf26ecaeb0 https://www.encodeproject.org/files/ENCFF197CJL/@@download/ENCFF197CJL.bam hg19 released antibody characterized with exemption, low read depth ENCFF152VYM bam unfiltered alignments ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF599YZI, ENCFF643CGH 1523286622 ENCODE Processing Pipeline ada9bcfb2826cd22bdb3d7be61cb0d4f https://www.encodeproject.org/files/ENCFF152VYM/@@download/ENCFF152VYM.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF759GZJ bam alignments ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF767XIJ, ENCFF807MUK 1024674526 ENCODE Processing Pipeline 5811f41bae2721ebf2a981f911c98eda https://www.encodeproject.org/files/ENCFF759GZJ/@@download/ENCFF759GZJ.bam hg19 released antibody characterized with exemption, low read depth ENCFF787VIZ bam alignments ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF767XIJ 1025266255 ENCODE Processing Pipeline 00c7fa92090643862d2ac878feb4c62c https://www.encodeproject.org/files/ENCFF787VIZ/@@download/ENCFF787VIZ.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF418WTW bam alignments ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF599YZI, ENCFF807MUK 1172580753 ENCODE Processing Pipeline 576219c7da1f7aed5a99cc7c27f57f38 https://www.encodeproject.org/files/ENCFF418WTW/@@download/ENCFF418WTW.bam hg19 released antibody characterized with exemption, low read depth ENCFF891QAW bam alignments ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF599YZI, ENCFF643CGH 1173554228 ENCODE Processing Pipeline 452f41223b2d707ef8807f2b466f5120 https://www.encodeproject.org/files/ENCFF891QAW/@@download/ENCFF891QAW.bam GRCh38 released antibody characterized with exemption, low read depth ENCFF414IUM bigWig signal p-value ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF891QAW 505612614 ENCODE Processing Pipeline 956beef2fcb0b3153fb588601291a64e https://www.encodeproject.org/files/ENCFF414IUM/@@download/ENCFF414IUM.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF447CDN bigWig signal p-value ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF787VIZ 480083206 ENCODE Processing Pipeline feb1f4929ddd059591a83cff67c57b2d https://www.encodeproject.org/files/ENCFF447CDN/@@download/ENCFF447CDN.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF923EBX bigWig signal p-value ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF787VIZ, ENCFF891QAW 668619739 ENCODE Processing Pipeline 939896a81b3320eb784326abfc996c86 https://www.encodeproject.org/files/ENCFF923EBX/@@download/ENCFF923EBX.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF875SLR bigWig fold change over control ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF787VIZ 427758214 ENCODE Processing Pipeline c52ef36b9393870e76fa159538597380 https://www.encodeproject.org/files/ENCFF875SLR/@@download/ENCFF875SLR.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF577XXO bed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF787VIZ 5475834 ENCODE Processing Pipeline d35f4372f8eaf7f8ac2063d70a1cfbc0 https://www.encodeproject.org/files/ENCFF577XXO/@@download/ENCFF577XXO.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF605DZE bigWig fold change over control ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF787VIZ, ENCFF891QAW 759501544 ENCODE Processing Pipeline 1bf190be9f124be8c247382c8c0965f4 https://www.encodeproject.org/files/ENCFF605DZE/@@download/ENCFF605DZE.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF261MQX bigWig fold change over control ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF891QAW 456932904 ENCODE Processing Pipeline 5cf8b0f43aeed7e7e32cab7b7aa0263b https://www.encodeproject.org/files/ENCFF261MQX/@@download/ENCFF261MQX.bigWig GRCh38 released antibody characterized with exemption, low read depth ENCFF748EYO bed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF891QAW 4892696 ENCODE Processing Pipeline 6534c25fc3c9feae1d93faea96ad02d2 https://www.encodeproject.org/files/ENCFF748EYO/@@download/ENCFF748EYO.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF922WJV bigBed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF577XXO 13189404 ENCODE Processing Pipeline 81905dc517c39b1027b7b88ab3118a8c https://www.encodeproject.org/files/ENCFF922WJV/@@download/ENCFF922WJV.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF917REK bed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF787VIZ, ENCFF891QAW 4314526 ENCODE Processing Pipeline 077211ff4fe9b2a4b94aa115fc5a6dc0 https://www.encodeproject.org/files/ENCFF917REK/@@download/ENCFF917REK.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF772SZC bigBed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF917REK 9331471 ENCODE Processing Pipeline 59ea1d9ef2acaf933472ac3710d9e254 https://www.encodeproject.org/files/ENCFF772SZC/@@download/ENCFF772SZC.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF441HSQ bigBed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF748EYO 10990541 ENCODE Processing Pipeline af08a20ed6a1812d187a749d670252e9 https://www.encodeproject.org/files/ENCFF441HSQ/@@download/ENCFF441HSQ.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF867MGI bed narrowPeak conservative idr thresholded peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF577XXO, ENCFF748EYO, ENCFF917REK 226677 ENCODE Processing Pipeline f6710de08c6259c5eb008bba44a496a5 https://www.encodeproject.org/files/ENCFF867MGI/@@download/ENCFF867MGI.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF371TDC bed narrowPeak optimal idr thresholded peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF577XXO, ENCFF748EYO, ENCFF917REK 232044 ENCODE Processing Pipeline 2593cc647a9150c2cfd33ea98478815e https://www.encodeproject.org/files/ENCFF371TDC/@@download/ENCFF371TDC.bed.gz GRCh38 released antibody characterized with exemption, low read depth ENCFF453KWC bigBed narrowPeak optimal idr thresholded peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF371TDC 440645 ENCODE Processing Pipeline 1401d8c91d1a0dfe354ef65576786e78 https://www.encodeproject.org/files/ENCFF453KWC/@@download/ENCFF453KWC.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF099BVR bigBed narrowPeak conservative idr thresholded peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF867MGI 433077 ENCODE Processing Pipeline 11b6c056cf34f8d2cf805958f68ac78b https://www.encodeproject.org/files/ENCFF099BVR/@@download/ENCFF099BVR.bigBed GRCh38 released antibody characterized with exemption, low read depth ENCFF561FNL bigWig signal p-value ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF759GZJ 1140188894 ENCODE Processing Pipeline c1d9019830fd580499ec331843022049 https://www.encodeproject.org/files/ENCFF561FNL/@@download/ENCFF561FNL.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF328XTC bigWig signal p-value ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF418WTW 1318744632 ENCODE Processing Pipeline e03b16135ae3881f2e777be1e12e8c9d https://www.encodeproject.org/files/ENCFF328XTC/@@download/ENCFF328XTC.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF301GLG bigWig signal p-value ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF418WTW, ENCFF759GZJ 1389609242 ENCODE Processing Pipeline 6e827a17d2d8c0b68e5be1ecd2f7cfa7 https://www.encodeproject.org/files/ENCFF301GLG/@@download/ENCFF301GLG.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF940NXY bigWig fold change over control ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF759GZJ 820146571 ENCODE Processing Pipeline b41064e6e799ccbd6130de0e53650724 https://www.encodeproject.org/files/ENCFF940NXY/@@download/ENCFF940NXY.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF530STV bigWig fold change over control ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF418WTW 940701797 ENCODE Processing Pipeline 5996c53bdeaf383beb672de6ea990c8e https://www.encodeproject.org/files/ENCFF530STV/@@download/ENCFF530STV.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF404RPV bigWig fold change over control ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF418WTW, ENCFF759GZJ 1315482606 ENCODE Processing Pipeline 12f554e8e4fd6847978e2472388f7023 https://www.encodeproject.org/files/ENCFF404RPV/@@download/ENCFF404RPV.bigWig hg19 released antibody characterized with exemption, low read depth ENCFF019DNW bed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF418WTW 6061843 ENCODE Processing Pipeline 309b53131eeb453b455e2c147d4b2bb8 https://www.encodeproject.org/files/ENCFF019DNW/@@download/ENCFF019DNW.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF158LYC bed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF759GZJ 6370153 ENCODE Processing Pipeline 1757a9ae4dc34674ee942e94a6b71c98 https://www.encodeproject.org/files/ENCFF158LYC/@@download/ENCFF158LYC.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF340YNG bed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF203ABR, ENCFF418WTW, ENCFF759GZJ 6754738 ENCODE Processing Pipeline 0e25d041eab6f377d8da6faea0236514 https://www.encodeproject.org/files/ENCFF340YNG/@@download/ENCFF340YNG.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF110SJQ bigBed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF158LYC 13279019 ENCODE Processing Pipeline 131cbce9db64afa84ab79b24eb3f96ee https://www.encodeproject.org/files/ENCFF110SJQ/@@download/ENCFF110SJQ.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF224GBC bigBed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF019DNW 13553635 ENCODE Processing Pipeline 558f15b4f9cd69836f199ec8db5cf53a https://www.encodeproject.org/files/ENCFF224GBC/@@download/ENCFF224GBC.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF638TSE bigBed narrowPeak peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF340YNG 13463152 ENCODE Processing Pipeline 2f4f4875074d9c22eaae3fe39ff1237b https://www.encodeproject.org/files/ENCFF638TSE/@@download/ENCFF638TSE.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF619RQX bed narrowPeak conservative idr thresholded peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF019DNW, ENCFF158LYC, ENCFF340YNG 227224 ENCODE Processing Pipeline a1909d17f22cde56a726fa40d680b04e https://www.encodeproject.org/files/ENCFF619RQX/@@download/ENCFF619RQX.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF844JPP bigBed narrowPeak conservative idr thresholded peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF619RQX 445756 ENCODE Processing Pipeline 4a74495a56a17e49437faf4f7dc3074a https://www.encodeproject.org/files/ENCFF844JPP/@@download/ENCFF844JPP.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF584DZS bed narrowPeak optimal idr thresholded peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF019DNW, ENCFF158LYC, ENCFF340YNG 238203 ENCODE Processing Pipeline 1d78b901b51628a84babadd365d93c9c https://www.encodeproject.org/files/ENCFF584DZS/@@download/ENCFF584DZS.bed.gz hg19 released antibody characterized with exemption, low read depth ENCFF759MGV bigBed narrowPeak optimal idr thresholded peaks ENCSR031ING ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-KDM6A-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF584DZS 460410 ENCODE Processing Pipeline 8ce8baf2576fada11cc43f5ce4038004 https://www.encodeproject.org/files/ENCFF759MGV/@@download/ENCFF759MGV.bigBed hg19 released antibody characterized with exemption, low read depth ENCFF770VIU fastq reads ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 5393575335 Richard Myers, HAIB c082eb360018914aeaadda5eeda4efc6 SRA:SRR5339108 https://www.encodeproject.org/files/ENCFF770VIU/@@download/ENCFF770VIU.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF192BLY fastq reads ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 1525741462 Richard Myers, HAIB 09a922e34e382bd375651d3d9c20da83 SRA:SRR5339109 https://www.encodeproject.org/files/ENCFF192BLY/@@download/ENCFF192BLY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released borderline replicate concordance, antibody characterized with exemption ENCFF549OTD bam unfiltered alignments ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF192BLY, ENCFF643CGH 1811008077 ENCODE Processing Pipeline 45242998902f17ccf898497f17707281 https://www.encodeproject.org/files/ENCFF549OTD/@@download/ENCFF549OTD.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF526FAB bam unfiltered alignments ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF192BLY, ENCFF807MUK 1807291096 ENCODE Processing Pipeline b2b0cf98832fd6e776c4a49c18d0e5c5 https://www.encodeproject.org/files/ENCFF526FAB/@@download/ENCFF526FAB.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF572QQB bam alignments ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF192BLY, ENCFF643CGH 1373685596 ENCODE Processing Pipeline 35979cf18bf392f6d4af514cd7cf798a https://www.encodeproject.org/files/ENCFF572QQB/@@download/ENCFF572QQB.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF139ZPI bam alignments ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF192BLY, ENCFF807MUK 1372881631 ENCODE Processing Pipeline e55d996943ad268df8b9d7f20eb77183 https://www.encodeproject.org/files/ENCFF139ZPI/@@download/ENCFF139ZPI.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF891KWV bam unfiltered alignments ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF770VIU 5642590871 ENCODE Processing Pipeline 7c77ada4ca993bc6f62012086caa4eea https://www.encodeproject.org/files/ENCFF891KWV/@@download/ENCFF891KWV.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF491YLU bam unfiltered alignments ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF770VIU, ENCFF807MUK 5633809837 ENCODE Processing Pipeline 8a139353fd6d75c36606c793be57a63f https://www.encodeproject.org/files/ENCFF491YLU/@@download/ENCFF491YLU.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF501SZR bam alignments ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF770VIU 4298388374 ENCODE Processing Pipeline 67cb79530454eddc4b89355775f82c40 https://www.encodeproject.org/files/ENCFF501SZR/@@download/ENCFF501SZR.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF378LSL bam alignments ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF770VIU, ENCFF807MUK 4295679973 ENCODE Processing Pipeline 9471bb53afbd36bdcd8ec3377df3e87e https://www.encodeproject.org/files/ENCFF378LSL/@@download/ENCFF378LSL.bam hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF267SQQ bigWig signal p-value ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF501SZR 645492526 ENCODE Processing Pipeline 940c366a8c54f8094213fb3e6aef1c65 https://www.encodeproject.org/files/ENCFF267SQQ/@@download/ENCFF267SQQ.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF439ZCP bigWig signal p-value ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF572QQB 498125207 ENCODE Processing Pipeline 84789f9bf05e759981cbab200d5d233d https://www.encodeproject.org/files/ENCFF439ZCP/@@download/ENCFF439ZCP.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF864OFR bigWig signal p-value ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF501SZR, ENCFF572QQB 617603274 ENCODE Processing Pipeline 46dad6024e372f2338b8dcf26178c353 https://www.encodeproject.org/files/ENCFF864OFR/@@download/ENCFF864OFR.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF393GXT bigWig fold change over control ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF501SZR 1297767693 ENCODE Processing Pipeline 1c65694211ea31d11f3ea848fd4ad3c9 https://www.encodeproject.org/files/ENCFF393GXT/@@download/ENCFF393GXT.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF426VVH bigWig fold change over control ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF572QQB 534098763 ENCODE Processing Pipeline 3eeb6b9018a9866566a51cae2555a9a3 https://www.encodeproject.org/files/ENCFF426VVH/@@download/ENCFF426VVH.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF464BRV bigWig fold change over control ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF501SZR, ENCFF572QQB 1573159805 ENCODE Processing Pipeline f1a87f3fb2497f274d9b311ae7f0ab2f https://www.encodeproject.org/files/ENCFF464BRV/@@download/ENCFF464BRV.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF008GNI bed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF501SZR, ENCFF572QQB 7120444 ENCODE Processing Pipeline bf4b4dc5f6b24517bd96583bd8bd74b4 https://www.encodeproject.org/files/ENCFF008GNI/@@download/ENCFF008GNI.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF424PAS bed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF501SZR 7105163 ENCODE Processing Pipeline 2deaf2d096cf9123742a7532fa315fb0 https://www.encodeproject.org/files/ENCFF424PAS/@@download/ENCFF424PAS.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF480NPE bigBed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF424PAS 12837598 ENCODE Processing Pipeline 1e3199c39001ea04c8a6a36fffc226df https://www.encodeproject.org/files/ENCFF480NPE/@@download/ENCFF480NPE.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF326AOA bed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF572QQB 5800562 ENCODE Processing Pipeline 58b881dafbc15a91db5cb1dcc5ad16c7 https://www.encodeproject.org/files/ENCFF326AOA/@@download/ENCFF326AOA.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF314CDT bed narrowPeak optimal idr thresholded peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF008GNI, ENCFF326AOA, ENCFF419RSJ, ENCFF424PAS 767931 ENCODE Processing Pipeline 9e4a2fb7aa969d0d66627d9cd56e8fc3 https://www.encodeproject.org/files/ENCFF314CDT/@@download/ENCFF314CDT.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF080XOV bigBed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF326AOA 13171882 ENCODE Processing Pipeline 7c786949950ff0f29ca9e6b9b7ec822f https://www.encodeproject.org/files/ENCFF080XOV/@@download/ENCFF080XOV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF054UUL bigBed narrowPeak optimal idr thresholded peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF314CDT 1398246 ENCODE Processing Pipeline 6c0e774fb3c2fe26910d537bbdb03ff8 https://www.encodeproject.org/files/ENCFF054UUL/@@download/ENCFF054UUL.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF196PLV bigBed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF008GNI 12842304 ENCODE Processing Pipeline 641eb3ef9afa2e364ca7277c7f1d5682 https://www.encodeproject.org/files/ENCFF196PLV/@@download/ENCFF196PLV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF467MXY bed narrowPeak conservative idr thresholded peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF008GNI, ENCFF326AOA, ENCFF419RSJ, ENCFF424PAS 527453 ENCODE Processing Pipeline f6c5c6c9d193ff2a9c0a32059d0ee61e https://www.encodeproject.org/files/ENCFF467MXY/@@download/ENCFF467MXY.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF909UHB bigBed narrowPeak conservative idr thresholded peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF467MXY 1045405 ENCODE Processing Pipeline 95267c740ef0581bb9fbb36bae3162cc https://www.encodeproject.org/files/ENCFF909UHB/@@download/ENCFF909UHB.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF382DLP bigWig signal p-value ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF139ZPI, ENCFF203ABR 1140725714 ENCODE Processing Pipeline cc80d27b4105437b96b79f7e68cf63b2 https://www.encodeproject.org/files/ENCFF382DLP/@@download/ENCFF382DLP.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF028LFW bigWig signal p-value ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF378LSL 1828221793 ENCODE Processing Pipeline 2acbda83dc75f56d707b7651a0b63521 https://www.encodeproject.org/files/ENCFF028LFW/@@download/ENCFF028LFW.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF925FOQ bigWig signal p-value ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF139ZPI, ENCFF203ABR, ENCFF378LSL 2151982450 ENCODE Processing Pipeline 201b23c9dc2852365ae109721fb46a39 https://www.encodeproject.org/files/ENCFF925FOQ/@@download/ENCFF925FOQ.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF490AKA bigWig fold change over control ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF378LSL 1897721186 ENCODE Processing Pipeline f961b157301ec62a147538c1b71f31f9 https://www.encodeproject.org/files/ENCFF490AKA/@@download/ENCFF490AKA.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF035RJG bigWig fold change over control ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF139ZPI, ENCFF203ABR 1007036847 ENCODE Processing Pipeline 4b5163862a08d328c65a8e182750839f https://www.encodeproject.org/files/ENCFF035RJG/@@download/ENCFF035RJG.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF322HKP bigWig fold change over control ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF139ZPI, ENCFF203ABR, ENCFF378LSL 2169420331 ENCODE Processing Pipeline 1e1a35886a4af17cb42c8c1b1ef1c334 https://www.encodeproject.org/files/ENCFF322HKP/@@download/ENCFF322HKP.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF596FKZ bed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF139ZPI, ENCFF203ABR 6483936 ENCODE Processing Pipeline 644d402386f8931742215280bbac6f4e https://www.encodeproject.org/files/ENCFF596FKZ/@@download/ENCFF596FKZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF640ZKF bed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF203ABR, ENCFF378LSL 6979957 ENCODE Processing Pipeline c2c01123b6dabcc3e4d151306ba84a09 https://www.encodeproject.org/files/ENCFF640ZKF/@@download/ENCFF640ZKF.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF605RYJ bed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF139ZPI, ENCFF203ABR, ENCFF378LSL 6955227 ENCODE Processing Pipeline eb6bcb72c4026db6feb4418cf75d701c https://www.encodeproject.org/files/ENCFF605RYJ/@@download/ENCFF605RYJ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF073JQC bigBed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF596FKZ 13223907 ENCODE Processing Pipeline c6df329e1b81649e6e15a69cdb918446 https://www.encodeproject.org/files/ENCFF073JQC/@@download/ENCFF073JQC.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF691MHR bigBed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF605RYJ 12761317 ENCODE Processing Pipeline 8f7b5b6e83ab8c08ae1432f6c24b1db0 https://www.encodeproject.org/files/ENCFF691MHR/@@download/ENCFF691MHR.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF186OEQ bigBed narrowPeak peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF640ZKF 12737782 ENCODE Processing Pipeline 2647c6aee6d774386a0f6d8f597b7289 https://www.encodeproject.org/files/ENCFF186OEQ/@@download/ENCFF186OEQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF664GVU bigBed narrowPeak conservative idr thresholded peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF633AYW 909354 ENCODE Processing Pipeline 6ba165cb20a506b6bae212ecd70d009a https://www.encodeproject.org/files/ENCFF664GVU/@@download/ENCFF664GVU.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF254JVA bigBed narrowPeak optimal idr thresholded peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF408ILT 1440044 ENCODE Processing Pipeline 35fb10f187ba7966562b2b5e2615ae88 https://www.encodeproject.org/files/ENCFF254JVA/@@download/ENCFF254JVA.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF408ILT bed narrowPeak optimal idr thresholded peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF596FKZ, ENCFF605RYJ, ENCFF640ZKF 732319 ENCODE Processing Pipeline de35f95c45167b6d59b20b7b1c9f8e9e https://www.encodeproject.org/files/ENCFF408ILT/@@download/ENCFF408ILT.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF633AYW bed narrowPeak conservative idr thresholded peaks ENCSR666QNP ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-TEAD3-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF596FKZ, ENCFF605RYJ, ENCFF640ZKF 538758 ENCODE Processing Pipeline df55f1554f8cfd3c6ccc7f8ee9b6e8b8 https://www.encodeproject.org/files/ENCFF633AYW/@@download/ENCFF633AYW.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption ENCFF764SMY fastq reads ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 1 76 single-ended 2325644299 Richard Myers, HAIB 74123804a96c9667a629cae2793b2996 SRA:SRR5331296 https://www.encodeproject.org/files/ENCFF764SMY/@@download/ENCFF764SMY.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF660VHF fastq reads ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 1 76 single-ended 2073108759 Richard Myers, HAIB 9eb0a90422d74e635bf5d0ab6cf492af SRA:SRR5331297 https://www.encodeproject.org/files/ENCFF660VHF/@@download/ENCFF660VHF.fastq.gz HiSeq 2000 /files/ENCFF302HDW/ released antibody characterized with exemption ENCFF071IQV bam unfiltered alignments ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF660VHF 2424337818 ENCODE Processing Pipeline 5a462ade51c016bf3d136d55942f245a https://www.encodeproject.org/files/ENCFF071IQV/@@download/ENCFF071IQV.bam GRCh38 released antibody characterized with exemption ENCFF479YWT bam unfiltered alignments ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF660VHF, ENCFF807MUK 2419775842 ENCODE Processing Pipeline ed6f2ab106126391ca8f927eac5bad8f https://www.encodeproject.org/files/ENCFF479YWT/@@download/ENCFF479YWT.bam hg19 released antibody characterized with exemption ENCFF871LGL bam unfiltered alignments ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF764SMY 2698080935 ENCODE Processing Pipeline c07c28b86e2bfc0a801ccc1cf040d780 https://www.encodeproject.org/files/ENCFF871LGL/@@download/ENCFF871LGL.bam GRCh38 released antibody characterized with exemption ENCFF931HHY bam unfiltered alignments ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF764SMY, ENCFF807MUK 2693002995 ENCODE Processing Pipeline de3b12a7a9006322803adb72b2f71fcd https://www.encodeproject.org/files/ENCFF931HHY/@@download/ENCFF931HHY.bam hg19 released antibody characterized with exemption ENCFF913AGP bam alignments ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF643CGH, ENCFF660VHF 1759548215 ENCODE Processing Pipeline 6c0ab69d17d8f1a5b1c0314236e40d1c https://www.encodeproject.org/files/ENCFF913AGP/@@download/ENCFF913AGP.bam GRCh38 released antibody characterized with exemption ENCFF894SSP bam alignments ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 76 ENCFF660VHF, ENCFF807MUK 1758647454 ENCODE Processing Pipeline 259adfd59c4f8cb78a75e133fa252df5 https://www.encodeproject.org/files/ENCFF894SSP/@@download/ENCFF894SSP.bam hg19 released antibody characterized with exemption ENCFF177JUU bam alignments ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF764SMY, ENCFF807MUK 1931799750 ENCODE Processing Pipeline 7fa85543e71c5dcd1f532546c1ed3b51 https://www.encodeproject.org/files/ENCFF177JUU/@@download/ENCFF177JUU.bam hg19 released antibody characterized with exemption ENCFF065ROU bam alignments ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 76 ENCFF643CGH, ENCFF764SMY 1932780468 ENCODE Processing Pipeline 310e3b8c183103c2ca7fc7ffb40db2e5 https://www.encodeproject.org/files/ENCFF065ROU/@@download/ENCFF065ROU.bam GRCh38 released antibody characterized with exemption ENCFF824ZWB bigWig signal p-value ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF065ROU 617554376 ENCODE Processing Pipeline 43bcd1766f88d055eed6666fa39231e9 https://www.encodeproject.org/files/ENCFF824ZWB/@@download/ENCFF824ZWB.bigWig GRCh38 released antibody characterized with exemption ENCFF548BGP bigWig signal p-value ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF065ROU, ENCFF913AGP 642501342 ENCODE Processing Pipeline a34f65a310187dc4ae73b3b5352fe27b https://www.encodeproject.org/files/ENCFF548BGP/@@download/ENCFF548BGP.bigWig GRCh38 released antibody characterized with exemption ENCFF208QXB bigWig signal p-value ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF913AGP 561360808 ENCODE Processing Pipeline aa33879da7b748464b048851599891a8 https://www.encodeproject.org/files/ENCFF208QXB/@@download/ENCFF208QXB.bigWig GRCh38 released antibody characterized with exemption ENCFF395GAJ bigWig fold change over control ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF065ROU 603649665 ENCODE Processing Pipeline bb37a988d7e47f3d02709b90f95fb088 https://www.encodeproject.org/files/ENCFF395GAJ/@@download/ENCFF395GAJ.bigWig GRCh38 released antibody characterized with exemption ENCFF893SJC bigWig fold change over control ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF913AGP 573775035 ENCODE Processing Pipeline 861e535b5ddcf7b1b34d1b27f3b9e86a https://www.encodeproject.org/files/ENCFF893SJC/@@download/ENCFF893SJC.bigWig GRCh38 released antibody characterized with exemption ENCFF432XEL bigWig fold change over control ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF065ROU, ENCFF913AGP 987702898 ENCODE Processing Pipeline 35f0dfec7bd7aa3881186330236cb232 https://www.encodeproject.org/files/ENCFF432XEL/@@download/ENCFF432XEL.bigWig GRCh38 released antibody characterized with exemption ENCFF920PJE bed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF065ROU 6268770 ENCODE Processing Pipeline 0e861c8c9f8e02713ad336245f841474 https://www.encodeproject.org/files/ENCFF920PJE/@@download/ENCFF920PJE.bed.gz GRCh38 released antibody characterized with exemption ENCFF994ZVU bed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF913AGP 6111129 ENCODE Processing Pipeline e2436aa9038948886ced913959c67df8 https://www.encodeproject.org/files/ENCFF994ZVU/@@download/ENCFF994ZVU.bed.gz GRCh38 released antibody characterized with exemption ENCFF849RKF bed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF065ROU, ENCFF913AGP 6807716 ENCODE Processing Pipeline b56720236af3d648c1e1c0ca6f3e46dc https://www.encodeproject.org/files/ENCFF849RKF/@@download/ENCFF849RKF.bed.gz GRCh38 released antibody characterized with exemption ENCFF710NCK bigBed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF920PJE 13210294 ENCODE Processing Pipeline 6cecdbb348e258b7a9611d5cd6fd9490 https://www.encodeproject.org/files/ENCFF710NCK/@@download/ENCFF710NCK.bigBed GRCh38 released antibody characterized with exemption ENCFF637NDN bigBed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF994ZVU 13201321 ENCODE Processing Pipeline f24e0e06d66c435ad2209db6e5b56469 https://www.encodeproject.org/files/ENCFF637NDN/@@download/ENCFF637NDN.bigBed GRCh38 released antibody characterized with exemption ENCFF840ZDE bigBed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF849RKF 13122664 ENCODE Processing Pipeline 79fc49d8da50ac262a2f42c0bd18f9cd https://www.encodeproject.org/files/ENCFF840ZDE/@@download/ENCFF840ZDE.bigBed GRCh38 released antibody characterized with exemption ENCFF736PPV bed narrowPeak optimal idr thresholded peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF849RKF, ENCFF920PJE, ENCFF994ZVU 456885 ENCODE Processing Pipeline b9496832205e5c0bec9c51e32b855e67 https://www.encodeproject.org/files/ENCFF736PPV/@@download/ENCFF736PPV.bed.gz GRCh38 released antibody characterized with exemption ENCFF606OVL bigBed narrowPeak optimal idr thresholded peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF736PPV 907086 ENCODE Processing Pipeline 1d9782f8c3a9336c0c0a74b22bbe05e3 https://www.encodeproject.org/files/ENCFF606OVL/@@download/ENCFF606OVL.bigBed GRCh38 released antibody characterized with exemption ENCFF504EHE bigWig signal p-value ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF177JUU, ENCFF203ABR 1265393267 ENCODE Processing Pipeline aef750b03a5726a4ed8971a95aeab15c https://www.encodeproject.org/files/ENCFF504EHE/@@download/ENCFF504EHE.bigWig hg19 released antibody characterized with exemption ENCFF739KTB bigWig signal p-value ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF894SSP 1192284055 ENCODE Processing Pipeline 3d041876ca32471fb0542b96e5525264 https://www.encodeproject.org/files/ENCFF739KTB/@@download/ENCFF739KTB.bigWig hg19 released antibody characterized with exemption ENCFF792AZY bigWig signal p-value ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF177JUU, ENCFF203ABR, ENCFF894SSP 1388691268 ENCODE Processing Pipeline 6965c8fe58b00265c2c718d04780a07f https://www.encodeproject.org/files/ENCFF792AZY/@@download/ENCFF792AZY.bigWig hg19 released antibody characterized with exemption ENCFF334RUV bigWig fold change over control ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF177JUU, ENCFF203ABR 1048550631 ENCODE Processing Pipeline 1a90d720fe53c88573b207f9c3545b58 https://www.encodeproject.org/files/ENCFF334RUV/@@download/ENCFF334RUV.bigWig hg19 released antibody characterized with exemption ENCFF294RDS bigWig fold change over control ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF894SSP 1001492274 ENCODE Processing Pipeline d13f71ec0b50758476c027ddae84279c https://www.encodeproject.org/files/ENCFF294RDS/@@download/ENCFF294RDS.bigWig hg19 released antibody characterized with exemption ENCFF228JSX bigWig fold change over control ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF177JUU, ENCFF203ABR, ENCFF894SSP 1637556519 ENCODE Processing Pipeline 70600214c7d43d8ae6738b10ef863427 https://www.encodeproject.org/files/ENCFF228JSX/@@download/ENCFF228JSX.bigWig hg19 released antibody characterized with exemption ENCFF392WIW bed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF177JUU, ENCFF203ABR 6731245 ENCODE Processing Pipeline d3de302c8bbffed33c919d7b767d4963 https://www.encodeproject.org/files/ENCFF392WIW/@@download/ENCFF392WIW.bed.gz hg19 released antibody characterized with exemption ENCFF704XPH bed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF203ABR, ENCFF894SSP 6704513 ENCODE Processing Pipeline b208cee7af26546bde52a39ebdcbe2de https://www.encodeproject.org/files/ENCFF704XPH/@@download/ENCFF704XPH.bed.gz hg19 released antibody characterized with exemption ENCFF544RTZ bed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF177JUU, ENCFF203ABR, ENCFF894SSP 7117715 ENCODE Processing Pipeline 5e7774164bf4e3341c5bc90ddb31c17b https://www.encodeproject.org/files/ENCFF544RTZ/@@download/ENCFF544RTZ.bed.gz hg19 released antibody characterized with exemption ENCFF304VNU bigBed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 2 ENCFF704XPH 13202262 ENCODE Processing Pipeline 0697be5909f82f75b62550b4f0abc2c1 https://www.encodeproject.org/files/ENCFF304VNU/@@download/ENCFF304VNU.bigBed hg19 released antibody characterized with exemption ENCFF124JGV bigBed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1 ENCFF392WIW 13215081 ENCODE Processing Pipeline 7a549cd672faa2a0d1f81051bee7046e https://www.encodeproject.org/files/ENCFF124JGV/@@download/ENCFF124JGV.bigBed hg19 released antibody characterized with exemption ENCFF129MRH bigBed narrowPeak peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF544RTZ 13168526 ENCODE Processing Pipeline 46df94a2a1eda8bdbec2c2abc1ff03af https://www.encodeproject.org/files/ENCFF129MRH/@@download/ENCFF129MRH.bigBed hg19 released antibody characterized with exemption ENCFF972IQJ bed narrowPeak optimal idr thresholded peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF001TDO, ENCFF392WIW, ENCFF544RTZ, ENCFF704XPH 438756 ENCODE Processing Pipeline 6146370743593070c24331cfe1551cf0 https://www.encodeproject.org/files/ENCFF972IQJ/@@download/ENCFF972IQJ.bed.gz hg19 released antibody characterized with exemption ENCFF270YXD bigBed narrowPeak optimal idr thresholded peaks ENCSR130VQL ChIP-seq EFO:0001187 HepG2 immortalized cell line child male 15 year Homo sapiens FLAG-PPARG-human ENCAB697XQW DNA False 2016-11-08 ENCODE 1, 2 ENCFF972IQJ 918508 ENCODE Processing Pipeline 1b85049fbb8af3824f9d0316574d484c https://www.encodeproject.org/files/ENCFF270YXD/@@download/ENCFF270YXD.bigBed hg19 released antibody characterized with exemption