#experiment experiment link target_type target biosample_name biosample_type biorep_id lab rfa assembly bam bam link unfiltered bam unfiltered bam link hiq_reads loq_reads mappable fract_mappable end r_lengths map_length crop_length picard_read_pairs_examined picard_unpaired_reads_examined usable_frags fract_usable NRF PBC1 PBC2 frag_len NSC RSC xcor plot library library aliases from fastqs platform date_created release status internal status DX analysis ENCSR847XGE https://www.encodeproject.org/experiments/ENCSR847XGE "transcription factor,RNA binding protein" CTCF-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF766RZV https://www.encodeproject.org/files/ENCFF766RZV/@@download/ENCFF766RZV.bam ENCFF864IHK https://www.encodeproject.org/files/ENCFF864IHK/@@download/ENCFF864IHK.bam 62.5 M 0 61.0 M 0.976 PE 100 100 native 25.7 M 0.0 M 24.3 M 0.777 0.94 0.94 17.49 375 1.16 2.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/943a9bde-c567-4152-8c73-da7af9fd5b77/@@download/cross_correlation_plot/ENCFF953SOHENCFF672YYT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB204YIW michael-snyder:L-2752 "ENCFF953SOH,ENCFF672YYT" HiSeq 2000 2017-03-23T18:10:13.930136+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QG5Q03690Q7X4FXKgzBXB ENCSR847XGE https://www.encodeproject.org/experiments/ENCSR847XGE "transcription factor,RNA binding protein" CTCF-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF371TIX https://www.encodeproject.org/files/ENCFF371TIX/@@download/ENCFF371TIX.bam ENCFF914ZQU https://www.encodeproject.org/files/ENCFF914ZQU/@@download/ENCFF914ZQU.bam 119.1 M 0 116.7 M 0.980 PE 100 100 native 50.5 M 0.0 M 44.5 M 0.748 0.88 0.88 8.16 350 1.21 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/227ffe25-b2a0-4846-8853-30a869d57dc8/@@download/cross_correlation_plot/ENCFF780PZKENCFF581WJZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB110WLV michael-snyder:L-2753 "ENCFF581WJZ,ENCFF780PZK" HiSeq 2000 2017-03-23T18:11:28.660000+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39XV3j03693465GFX6Xz1qP ENCSR857PBV https://www.encodeproject.org/experiments/ENCSR857PBV "transcription factor,RNA binding protein" CTCF-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF514UAV https://www.encodeproject.org/files/ENCFF514UAV/@@download/ENCFF514UAV.bam ENCFF825AAU https://www.encodeproject.org/files/ENCFF825AAU/@@download/ENCFF825AAU.bam 106.5 M 0 104.5 M 0.982 PE 100 100 native 45.2 M 0.0 M 42.4 M 0.797 0.94 0.94 15.87 325 1.16 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/931e6b25-d1d0-4228-a263-575090f7e7e2/@@download/cross_correlation_plot/ENCFF743IYAENCFF262QVS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB407QHY michael-snyder:L-2750 "ENCFF743IYA,ENCFF262QVS" HiSeq 2000 2017-02-22T05:31:10.105771+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Q30036926qyxPB8gvxJK ENCSR857PBV https://www.encodeproject.org/experiments/ENCSR857PBV "transcription factor,RNA binding protein" CTCF-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF319QUU https://www.encodeproject.org/files/ENCFF319QUU/@@download/ENCFF319QUU.bam ENCFF646IVA https://www.encodeproject.org/files/ENCFF646IVA/@@download/ENCFF646IVA.bam 112.8 M 0 110.7 M 0.981 PE 100 100 native 48.0 M 0.0 M 40.4 M 0.716 0.84 0.84 5.92 310 1.24 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cc47001-b1c6-4d90-9b1e-5fef3691a189/@@download/cross_correlation_plot/ENCFF860SCIENCFF066XRO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB947RFP michael-snyder:L-2751 "ENCFF066XRO,ENCFF860SCI" HiSeq 2000 2017-02-22T05:29:58.979222+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5QF003699BJ8f3PbkYB0J ENCSR246MLJ https://www.encodeproject.org/experiments/ENCSR246MLJ transcription factor ZFX-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF342JBG https://www.encodeproject.org/files/ENCFF342JBG/@@download/ENCFF342JBG.bam ENCFF724INS https://www.encodeproject.org/files/ENCFF724INS/@@download/ENCFF724INS.bam 93.7 M 0 91.3 M 0.974 PE 100 100 native 38.1 M 0.0 M 37.5 M 0.800 0.98 0.98 66.31 290 1.03 3.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/1149893e-135c-44b9-8a87-76e37d946a02/@@download/cross_correlation_plot/ENCFF170NRXENCFF697UGT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB133TRK michael-snyder:L-3298 "ENCFF697UGT,ENCFF170NRX" HiSeq 2000 2017-03-04T18:13:30.057689+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv37803691jGpk3j84pKZF ENCSR246MLJ https://www.encodeproject.org/experiments/ENCSR246MLJ transcription factor ZFX-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF714QBW https://www.encodeproject.org/files/ENCFF714QBW/@@download/ENCFF714QBW.bam ENCFF690XDZ https://www.encodeproject.org/files/ENCFF690XDZ/@@download/ENCFF690XDZ.bam 70.4 M 0 68.5 M 0.972 PE 100 100 native 28.2 M 0.0 M 27.6 M 0.783 0.98 0.98 41.96 335 1.03 6.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/da51a064-25cc-49d4-91ea-f53965c0f1ca/@@download/cross_correlation_plot/ENCFF328CPOENCFF761YLA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB516BSK michael-snyder:L-3299 "ENCFF328CPO,ENCFF761YLA" HiSeq 2000 2017-03-04T18:09:00.072966+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv3Y803694x4vF5KZfq8VV ENCSR043EHG https://www.encodeproject.org/experiments/ENCSR043EHG transcription factor BACH1-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF405NYN https://www.encodeproject.org/files/ENCFF405NYN/@@download/ENCFF405NYN.bam ENCFF409BHJ https://www.encodeproject.org/files/ENCFF409BHJ/@@download/ENCFF409BHJ.bam 26.1 M 0 25.3 M 0.971 SE 36 36 native 0.0 M 19.2 M 14.3 M 0.549 0.78 0.77 4.03 130 1.09 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f1e9527-8186-4d47-97f5-43a986245ffa/@@download/cross_correlation_plot/ENCFF002DZO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB730OUL michael-snyder:Bach1_sc-14700_A549_Rep1 ENCFF002DZO Illumina Genome Analyzer IIx 2016-10-29T18:01:59.980253+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B20ZQ0jv1Y4294qbK859jk ENCSR043EHG https://www.encodeproject.org/experiments/ENCSR043EHG transcription factor BACH1-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF360GII https://www.encodeproject.org/files/ENCFF360GII/@@download/ENCFF360GII.bam ENCFF887CIL https://www.encodeproject.org/files/ENCFF887CIL/@@download/ENCFF887CIL.bam 27.5 M 0 26.1 M 0.950 SE 36 36 native 0.0 M 19.9 M 17.1 M 0.623 0.87 0.87 7.55 125 1.07 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/de5f735c-01c3-4ad5-b925-105253e60f4b/@@download/cross_correlation_plot/ENCFF002DZQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB372MYJ michael-snyder:Bach1_sc-14700_G_A549_Rep2 ENCFF002DZQ Illumina Genome Analyzer IIx 2016-10-29T18:02:21.407099+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B20g00jv1x3VFb9bq4F6jz ENCSR067HGI https://www.encodeproject.org/experiments/ENCSR067HGI "RNA binding protein,transcription factor" CHD2-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF411JMW https://www.encodeproject.org/files/ENCFF411JMW/@@download/ENCFF411JMW.bam ENCFF199FLQ https://www.encodeproject.org/files/ENCFF199FLQ/@@download/ENCFF199FLQ.bam 30.9 M 0 30.7 M 0.993 SE 36 36 native 0.0 M 23.4 M 22.0 M 0.712 0.94 0.94 17.90 140 1.05 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/abde45df-7719-4b66-9c11-1251d49dae55/@@download/cross_correlation_plot/ENCFF002DZW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB267TJL michael-snyder:CHD2_ab68301_A549_Rep1 ENCFF002DZW Illumina Genome Analyzer IIx 2016-10-29T18:01:47.760934+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B21100jv1YF6GvgxF24Y3x ENCSR067HGI https://www.encodeproject.org/experiments/ENCSR067HGI "RNA binding protein,transcription factor" CHD2-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF757MUH https://www.encodeproject.org/files/ENCFF757MUH/@@download/ENCFF757MUH.bam ENCFF767WLN https://www.encodeproject.org/files/ENCFF767WLN/@@download/ENCFF767WLN.bam 31.4 M 0 30.9 M 0.986 SE 36 36 native 0.0 M 23.7 M 22.5 M 0.719 0.96 0.96 25.35 125 1.06 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/4162daea-10a6-4dc1-8490-4df2221e377d/@@download/cross_correlation_plot/ENCFF002DZX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB767KVU michael-snyder:CHD2_ab68301_Rb_A549_Rep3 ENCFF002DZX Illumina Genome Analyzer IIx 2016-10-29T18:01:57.190906+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B213Q0jv1f68063VP6bfX1 ENCSR000DYD https://www.encodeproject.org/experiments/ENCSR000DYD "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF835YDD https://www.encodeproject.org/files/ENCFF835YDD/@@download/ENCFF835YDD.bam ENCFF757DXC https://www.encodeproject.org/files/ENCFF757DXC/@@download/ENCFF757DXC.bam 31.9 M 0 31.1 M 0.974 SE 36 36 native 0.0 M 24.6 M 20.5 M 0.642 0.84 0.85 6.74 120 1.86 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/e16c7702-f38e-4ce0-b1b2-49d7aa1041ba/@@download/cross_correlation_plot/ENCFF000VPD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACF ENCFF000VPD Illumina Genome Analyzer 2016-12-10T18:07:03.888785+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1628P803697K4B1J71pxzPY ENCSR000DYD https://www.encodeproject.org/experiments/ENCSR000DYD "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF280TYK https://www.encodeproject.org/files/ENCFF280TYK/@@download/ENCFF280TYK.bam ENCFF944BLM https://www.encodeproject.org/files/ENCFF944BLM/@@download/ENCFF944BLM.bam 29.2 M 0 28.6 M 0.980 SE 36 36 native 0.0 M 22.0 M 20.3 M 0.695 0.93 0.93 15.14 120 1.24 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b823c20-2819-4d5a-9513-7dec47c1f463/@@download/cross_correlation_plot/ENCFF000VPF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACG ENCFF000VPF Illumina Genome Analyzer 2016-12-10T17:50:49.873645+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1628Z003698ZxQY8q63X7p2 ENCSR623KNM https://www.encodeproject.org/experiments/ENCSR623KNM transcription factor ELK1-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF826GGN https://www.encodeproject.org/files/ENCFF826GGN/@@download/ENCFF826GGN.bam ENCFF586LSC https://www.encodeproject.org/files/ENCFF586LSC/@@download/ENCFF586LSC.bam 27.8 M 0 27.5 M 0.987 SE 36 36 native 0.0 M 20.9 M 18.2 M 0.653 0.87 0.87 7.31 120 1.04 2.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd1b61f3-a842-450b-a446-c2c369ec808b/@@download/cross_correlation_plot/ENCFF002EAB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB266MOM michael-snyder:ELK-1_1277-1_A549_Rep1 ENCFF002EAB Illumina Genome Analyzer IIx 2016-10-09T17:09:37.609296+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40F80jv1XYYX2Fxk3f4x2 ENCSR623KNM https://www.encodeproject.org/experiments/ENCSR623KNM transcription factor ELK1-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF757GXN https://www.encodeproject.org/files/ENCFF757GXN/@@download/ENCFF757GXN.bam ENCFF522IVZ https://www.encodeproject.org/files/ENCFF522IVZ/@@download/ENCFF522IVZ.bam 20.3 M 0 19.6 M 0.962 SE 36 36 native 0.0 M 14.8 M 13.5 M 0.666 0.92 0.92 11.85 110 1.03 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/18301872-df5c-413f-8ed9-8d4e1dcabe6a/@@download/cross_correlation_plot/ENCFF002DZZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB938FQI michael-snyder:ELK-1_1277-1_Rb_A549_Rep3 ENCFF002DZZ Illumina Genome Analyzer IIx 2016-10-09T17:08:58.821117+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40GQ0jv1XYYX2Fxk3f4xB ENCSR541WQI https://www.encodeproject.org/experiments/ENCSR541WQI transcription factor MAFK-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF516AEF https://www.encodeproject.org/files/ENCFF516AEF/@@download/ENCFF516AEF.bam ENCFF384SRN https://www.encodeproject.org/files/ENCFF384SRN/@@download/ENCFF384SRN.bam 72.1 M 0 70.8 M 0.982 PE 100 100 native 31.7 M 0.0 M 29.8 M 0.827 0.94 0.94 16.98 195 1.31 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/9294843a-b5d1-4cab-8541-c2e733a616f2/@@download/cross_correlation_plot/ENCFF002ELYENCFF002ELZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB111KPJ michael-snyder:792_B_TruSeq_ATCACG "ENCFF002ELZ,ENCFF002ELY" HiSeq 2000 2016-10-29T18:06:23.137759+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B23G00jv1vy59VJQ1KqK5P ENCSR541WQI https://www.encodeproject.org/experiments/ENCSR541WQI transcription factor MAFK-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF420RDM https://www.encodeproject.org/files/ENCFF420RDM/@@download/ENCFF420RDM.bam ENCFF697CCI https://www.encodeproject.org/files/ENCFF697CCI/@@download/ENCFF697CCI.bam 96.6 M 0 94.6 M 0.980 PE 100 100 native 42.1 M 0.0 M 40.8 M 0.846 0.97 0.97 36.48 190 1.20 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/817e4582-b2e6-4eff-8f93-ca81c6c24d27/@@download/cross_correlation_plot/ENCFF002EMAENCFF002EMB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB398YFR michael-snyder:792_B_TruSeq_CGATGT "ENCFF002EMB,ENCFF002EMA" HiSeq 2000 2016-10-29T18:09:55.593735+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B23KQ0jv1pX1xqb1B8191F ENCSR000DYG https://www.encodeproject.org/experiments/ENCSR000DYG transcription factor MAX-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF820GHI https://www.encodeproject.org/files/ENCFF820GHI/@@download/ENCFF820GHI.bam ENCFF531PPG https://www.encodeproject.org/files/ENCFF531PPG/@@download/ENCFF531PPG.bam 28.5 M 0 27.7 M 0.972 SE 36 36 native 0.0 M 20.9 M 20.2 M 0.708 0.97 0.97 31.86 95 1.06 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/0637405a-bd4e-4113-9391-6913ec75b6b4/@@download/cross_correlation_plot/ENCFF000VPU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAO ENCFF000VPU Illumina Genome Analyzer 2016-12-11T04:52:08.814629+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1661Z00369GF0YB1zjPf750 ENCSR636YLV https://www.encodeproject.org/experiments/ENCSR636YLV "RNA binding protein,transcription factor" MAZ-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF754RTV https://www.encodeproject.org/files/ENCFF754RTV/@@download/ENCFF754RTV.bam ENCFF011PQC https://www.encodeproject.org/files/ENCFF011PQC/@@download/ENCFF011PQC.bam 23.5 M 0 22.4 M 0.951 SE 36 36 native 0.0 M 16.7 M 16.1 M 0.686 0.97 0.97 34.60 90 1.03 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f20c5ee-44c8-4506-b6c2-bc8d0678f8fb/@@download/cross_correlation_plot/ENCFF002EAJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB203OIN michael-snyder:Maz_ab85725_A549_Rep2 ENCFF002EAJ Illumina Genome Analyzer IIx 2016-10-09T17:01:16.645798+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4QZQ0jv1vY92b0GYjVG6V ENCSR636YLV https://www.encodeproject.org/experiments/ENCSR636YLV "RNA binding protein,transcription factor" MAZ-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF215YFO https://www.encodeproject.org/files/ENCFF215YFO/@@download/ENCFF215YFO.bam ENCFF839GUJ https://www.encodeproject.org/files/ENCFF839GUJ/@@download/ENCFF839GUJ.bam 33.8 M 0 33.3 M 0.987 SE 36 36 native 0.0 M 25.5 M 23.7 M 0.702 0.93 0.93 14.14 130 1.02 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/588345e6-be44-4885-a5ba-059da3a30fea/@@download/cross_correlation_plot/ENCFF002EAI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB733OBS michael-snyder:Maz_ab85725_Rb_A549_Rep3 ENCFF002EAI Illumina Genome Analyzer IIx 2016-10-09T17:01:15.852182+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Qf00jv1xPyfX78Yz4jBZ ENCSR000DYC https://www.encodeproject.org/experiments/ENCSR000DYC transcription factor MYC-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF367WEI https://www.encodeproject.org/files/ENCFF367WEI/@@download/ENCFF367WEI.bam ENCFF683CHH https://www.encodeproject.org/files/ENCFF683CHH/@@download/ENCFF683CHH.bam 29.3 M 0 28.8 M 0.983 SE 36 36 native 0.0 M 22.1 M 18.8 M 0.642 0.86 0.85 6.47 115 1.07 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/68d819f0-7aef-493e-bf52-b143aa9f8cca/@@download/cross_correlation_plot/ENCFF000VOU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANT ENCFF000VOU Illumina Genome Analyzer 2016-12-11T03:09:28.890006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164BPj03693JQ1ZJ95zxGpb ENCSR000DYC https://www.encodeproject.org/experiments/ENCSR000DYC transcription factor MYC-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF866MOR https://www.encodeproject.org/files/ENCFF866MOR/@@download/ENCFF866MOR.bam ENCFF408TPS https://www.encodeproject.org/files/ENCFF408TPS/@@download/ENCFF408TPS.bam 31.3 M 0 30.5 M 0.974 SE 36 36 native 0.0 M 23.0 M 21.8 M 0.697 0.95 0.95 21.30 115 1.03 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/41339530-09cb-485e-a44a-b181b9723ad2/@@download/cross_correlation_plot/ENCFF000VOW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANS ENCFF000VOW Illumina Genome Analyzer 2016-12-11T03:15:37.433572+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Bb003695Kj1j8qPQgkZY ENCSR584GHV https://www.encodeproject.org/experiments/ENCSR584GHV transcription factor NFE2L2-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF004JMG https://www.encodeproject.org/files/ENCFF004JMG/@@download/ENCFF004JMG.bam ENCFF190IFF https://www.encodeproject.org/files/ENCFF190IFF/@@download/ENCFF190IFF.bam 28.6 M 0 28.3 M 0.993 SE 36 36 native 0.0 M 21.5 M 20.5 M 0.718 0.96 0.96 22.80 130 1.05 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e9df18b-bb7a-46e4-a5fe-78c403a6df5b/@@download/cross_correlation_plot/ENCFF002EAK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB179UUZ michael-snyder:Nrf2_sc-13032_A549_Rep1 ENCFF002EAK Illumina Genome Analyzer IIx 2016-10-09T17:02:01.846050+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4KpQ0jv1vY92b0GYjVG41 ENCSR584GHV https://www.encodeproject.org/experiments/ENCSR584GHV transcription factor NFE2L2-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF003TGD https://www.encodeproject.org/files/ENCFF003TGD/@@download/ENCFF003TGD.bam ENCFF725VLJ https://www.encodeproject.org/files/ENCFF725VLJ/@@download/ENCFF725VLJ.bam 28.8 M 0 27.9 M 0.972 SE 36 36 native 0.0 M 21.0 M 20.2 M 0.701 0.96 0.96 27.89 100 1.05 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/34c2c046-4897-4664-81bb-79c52f53101c/@@download/cross_correlation_plot/ENCFF002EAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB966UUM michael-snyder:Nrf2_sc-13032_A549_Rep2 ENCFF002EAH Illumina Genome Analyzer IIx 2016-10-09T17:02:03.619170+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Kv00jv1zBYbxYJ5zzzQk ENCSR000DYE https://www.encodeproject.org/experiments/ENCSR000DYE transcription factor RAD21-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF520FBS https://www.encodeproject.org/files/ENCFF520FBS/@@download/ENCFF520FBS.bam ENCFF443LIY https://www.encodeproject.org/files/ENCFF443LIY/@@download/ENCFF443LIY.bam 31.3 M 0 31.1 M 0.992 SE 36 36 native 0.0 M 23.9 M 21.7 M 0.693 0.91 0.91 11.00 120 1.13 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/00caa8fb-968b-461e-8409-b180bd00f3f3/@@download/cross_correlation_plot/ENCFF000VQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACJ ENCFF000VQI Illumina Genome Analyzer 2016-12-11T03:24:22.734746+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Pg00369KbxV61z4GFvFg ENCSR000DYE https://www.encodeproject.org/experiments/ENCSR000DYE transcription factor RAD21-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF287VUW https://www.encodeproject.org/files/ENCFF287VUW/@@download/ENCFF287VUW.bam ENCFF670MRT https://www.encodeproject.org/files/ENCFF670MRT/@@download/ENCFF670MRT.bam 30.2 M 0 29.3 M 0.971 SE 36 36 native 0.0 M 22.1 M 21.3 M 0.705 0.97 0.97 31.56 100 1.09 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/17287cd7-9ea7-47f5-9265-18261f2c7728/@@download/cross_correlation_plot/ENCFF000VQK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFR ENCFF000VQK Illumina Genome Analyzer 2016-12-11T03:24:03.267288+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164PqQ0369PvYp91zK1PxBP ENCSR618ICR https://www.encodeproject.org/experiments/ENCSR618ICR transcription factor RCOR1-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF758YDA https://www.encodeproject.org/files/ENCFF758YDA/@@download/ENCFF758YDA.bam ENCFF127UAE https://www.encodeproject.org/files/ENCFF127UAE/@@download/ENCFF127UAE.bam 31.7 M 0 31.4 M 0.990 SE 36 36 native 0.0 M 23.8 M 21.7 M 0.685 0.92 0.92 11.64 140 1.03 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3ccd575-1cd6-4b5b-ab22-1ba559471208/@@download/cross_correlation_plot/ENCFF002EAC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB169PHV michael-snyder:CoREST_sc-30189_A549_Rep1 ENCFF002EAC Illumina Genome Analyzer IIx 2016-10-29T18:01:25.776689+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B22Bj0jv1Zq32PPxBJ7XQb ENCSR618ICR https://www.encodeproject.org/experiments/ENCSR618ICR transcription factor RCOR1-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF193KZT https://www.encodeproject.org/files/ENCFF193KZT/@@download/ENCFF193KZT.bam ENCFF809JRB https://www.encodeproject.org/files/ENCFF809JRB/@@download/ENCFF809JRB.bam 23.7 M 0 23.1 M 0.976 SE 36 36 native 0.0 M 17.4 M 16.9 M 0.713 0.97 0.97 38.19 90 1.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/5eb724f4-63e5-4916-946b-2bdc134ec6e1/@@download/cross_correlation_plot/ENCFF002EAA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB862MLL michael-snyder:CoREST_sc-30189_A549_Rep2 ENCFF002EAA Illumina Genome Analyzer IIx 2016-10-29T18:01:07.197760+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B22J80jv1vJ6xQfbB7FXZB ENCSR064LJN https://www.encodeproject.org/experiments/ENCSR064LJN transcription factor RFX5-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF057AUM https://www.encodeproject.org/files/ENCFF057AUM/@@download/ENCFF057AUM.bam ENCFF355XGR https://www.encodeproject.org/files/ENCFF355XGR/@@download/ENCFF355XGR.bam 71.7 M 0 70.0 M 0.976 PE 100 100 native 31.3 M 0.0 M 22.9 M 0.638 0.73 0.72 3.39 215 1.14 3.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5454820-16b2-41cd-8390-71b4749290f3/@@download/cross_correlation_plot/ENCFF002EJAENCFF002EIY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB189SWO michael-snyder:790_A_TruSeq_TTAGGC "ENCFF002EIY,ENCFF002EJA" HiSeq 2000 2016-10-29T18:05:11.055298+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B25Qj0jv1kpQzk2JB6KzXV ENCSR064LJN https://www.encodeproject.org/experiments/ENCSR064LJN transcription factor RFX5-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF850BEV https://www.encodeproject.org/files/ENCFF850BEV/@@download/ENCFF850BEV.bam ENCFF980GCQ https://www.encodeproject.org/files/ENCFF980GCQ/@@download/ENCFF980GCQ.bam 67.5 M 0 65.1 M 0.965 PE 100 100 native 29.0 M 0.0 M 25.9 M 0.768 0.89 0.89 9.28 250 1.11 4.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef0c6b7e-2a1c-4d18-8f1b-7ef174ac0fdb/@@download/cross_correlation_plot/ENCFF002EJGENCFF002EJJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB221OEV michael-snyder:790_A_TruSeq_TGACCA "ENCFF002EJJ,ENCFF002EJG" HiSeq 2000 2016-10-29T18:05:19.696357+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B25YQ0jv1xg5PX69583j4J ENCSR513XQX https://www.encodeproject.org/experiments/ENCSR513XQX transcription factor SIN3A-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF590UVB https://www.encodeproject.org/files/ENCFF590UVB/@@download/ENCFF590UVB.bam ENCFF749VOD https://www.encodeproject.org/files/ENCFF749VOD/@@download/ENCFF749VOD.bam 67.2 M 0 65.3 M 0.972 PE 100 100 native 29.2 M 0.0 M 24.1 M 0.718 0.83 0.82 5.41 215 1.14 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/f846d0bf-6522-4d81-b96e-ac912dcb8c84/@@download/cross_correlation_plot/ENCFF002EJKENCFF002EJO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB382QVT michael-snyder:790_B_TruSeq_ATCACG "ENCFF002EJK,ENCFF002EJO" HiSeq 2000 2016-10-09T17:13:02.619205+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zk80jv1zBYbxYJ5zzz3K ENCSR513XQX https://www.encodeproject.org/experiments/ENCSR513XQX transcription factor SIN3A-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF053PLI https://www.encodeproject.org/files/ENCFF053PLI/@@download/ENCFF053PLI.bam ENCFF624RPG https://www.encodeproject.org/files/ENCFF624RPG/@@download/ENCFF624RPG.bam 76.8 M 0 75.0 M 0.977 PE 100 100 native 33.5 M 0.0 M 31.3 M 0.816 0.94 0.94 15.44 175 1.11 2.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c866c2ea-fcf3-45ac-af39-bac6a2aef1b4/@@download/cross_correlation_plot/ENCFF002EJUENCFF002EJN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB354CYM michael-snyder:790_B_TruSeq_CGATGT "ENCFF002EJN,ENCFF002EJU" HiSeq 2000 2016-10-09T17:14:32.454627+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zpj0jv1XYYX2Fxk3f4vY ENCSR481YWD https://www.encodeproject.org/experiments/ENCSR481YWD transcription factor SMC3-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF677VYD https://www.encodeproject.org/files/ENCFF677VYD/@@download/ENCFF677VYD.bam ENCFF201YWK https://www.encodeproject.org/files/ENCFF201YWK/@@download/ENCFF201YWK.bam 26.2 M 0 26.0 M 0.991 SE 36 36 native 0.0 M 19.9 M 18.4 M 0.701 0.93 0.92 12.92 130 1.04 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/639d2983-d3f7-4472-8ad2-2093a430a77e/@@download/cross_correlation_plot/ENCFF160OSF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB148MTX michael-snyder:L-1251 ENCFF160OSF Illumina Genome Analyzer IIx 2016-10-09T17:08:18.457977+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fg80jv1XYYX2Fxk3f4XP ENCSR481YWD https://www.encodeproject.org/experiments/ENCSR481YWD transcription factor SMC3-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF533DRO https://www.encodeproject.org/files/ENCFF533DRO/@@download/ENCFF533DRO.bam ENCFF886RIX https://www.encodeproject.org/files/ENCFF886RIX/@@download/ENCFF886RIX.bam 29.0 M 0 28.2 M 0.971 SE 36 36 native 0.0 M 21.3 M 20.5 M 0.705 0.96 0.96 28.98 110 1.16 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d5d54db-7c31-4d37-9c45-83f563693027/@@download/cross_correlation_plot/ENCFF742IYU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB696EQC michael-snyder:L-1263 ENCFF742IYU Illumina Genome Analyzer IIx 2016-10-09T17:08:17.752077+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fjQ0jv1g5yGjfvVx0KYP ENCSR897MYK https://www.encodeproject.org/experiments/ENCSR897MYK transcription factor SREBF1-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF788IFN https://www.encodeproject.org/files/ENCFF788IFN/@@download/ENCFF788IFN.bam ENCFF751XYE https://www.encodeproject.org/files/ENCFF751XYE/@@download/ENCFF751XYE.bam 84.3 M 0 82.5 M 0.980 PE 100 100 native 36.8 M 0.0 M 34.3 M 0.813 0.93 0.93 14.58 205 1.07 6.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/03bc0262-080b-458e-9655-54fe8c1f90c0/@@download/cross_correlation_plot/ENCFF002EMEENCFF002EMH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB327ZYR michael-snyder:792_A_TruSeq_ATCACG "ENCFF002EME,ENCFF002EMH" HiSeq 2000 2016-10-09T17:16:17.467341+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bg00jv1QxJBfj5Zb2p9x ENCSR897MYK https://www.encodeproject.org/experiments/ENCSR897MYK transcription factor SREBF1-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF224BFU https://www.encodeproject.org/files/ENCFF224BFU/@@download/ENCFF224BFU.bam ENCFF979FRI https://www.encodeproject.org/files/ENCFF979FRI/@@download/ENCFF979FRI.bam 94.1 M 0 92.2 M 0.979 PE 100 100 native 40.8 M 0.0 M 38.8 M 0.824 0.95 0.95 20.35 190 1.05 5.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/df9add45-733c-4a7a-beda-0f30d34e4336/@@download/cross_correlation_plot/ENCFF002EMIENCFF002EMK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB782WCF michael-snyder:792_A_TruSeq_CGATGT "ENCFF002EMK,ENCFF002EMI" HiSeq 2000 2016-10-09T17:17:49.921556+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bjQ0jv1vY92b0GYjVFJ7 ENCSR000DYM https://www.encodeproject.org/experiments/ENCSR000DYM transcription factor RELA-human GM10847 immortalized cell line michael-snyder ENCODE2 pending SE "28,34" Illumina Genome Analyzer unreviewed ENCSR778UBR https://www.encodeproject.org/experiments/ENCSR778UBR transcription factor ARID3A-human GM12878 immortalized cell line 5 michael-snyder ENCODE3 GRCh38 ENCFF079ZYM https://www.encodeproject.org/files/ENCFF079ZYM/@@download/ENCFF079ZYM.bam ENCFF947KGN https://www.encodeproject.org/files/ENCFF947KGN/@@download/ENCFF947KGN.bam 78.1 M 0 54.7 M 0.700 PE 100 100 native 24.5 M 0.0 M 16.7 M 0.427 0.68 0.67 2.95 185 1.13 3.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/01431a12-7fd6-47d8-ad51-32331a75789d/@@download/cross_correlation_plot/ENCFF294EUQENCFF742VZZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB425GXU michael-snyder:L-3122 "ENCFF742VZZ,ENCFF294EUQ" HiSeq 4000 2017-01-28T04:50:45.421586+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJg803698PJpF5b3Y5q96 ENCSR778UBR https://www.encodeproject.org/experiments/ENCSR778UBR transcription factor ARID3A-human GM12878 immortalized cell line 6 michael-snyder ENCODE3 GRCh38 ENCFF576RFC https://www.encodeproject.org/files/ENCFF576RFC/@@download/ENCFF576RFC.bam ENCFF798SEF https://www.encodeproject.org/files/ENCFF798SEF/@@download/ENCFF798SEF.bam 84.6 M 0 57.4 M 0.678 PE 100 100 native 25.6 M 0.0 M 17.0 M 0.401 0.66 0.65 2.80 180 1.15 3.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/db697156-c5ba-464a-9d1b-77584829a8ad/@@download/cross_correlation_plot/ENCFF900RHAENCFF993KAU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712YAL michael-snyder:L-3123 "ENCFF993KAU,ENCFF900RHA" HiSeq 4000 2017-01-28T04:51:28.641221+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJxQ03699PJK0J00Qzbky ENCSR590KEQ https://www.encodeproject.org/experiments/ENCSR590KEQ transcription factor ARNT-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF389BWB https://www.encodeproject.org/files/ENCFF389BWB/@@download/ENCFF389BWB.bam ENCFF464HMQ https://www.encodeproject.org/files/ENCFF464HMQ/@@download/ENCFF464HMQ.bam 100.5 M 0 89.4 M 0.890 PE 100 100 native 38.3 M 0.0 M 32.8 M 0.653 0.86 0.86 6.81 225 1.05 3.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e21d68a-2a7a-443f-865d-bdad1446a1af/@@download/cross_correlation_plot/ENCFF664XIQENCFF121XGX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB616AAL michael-snyder:L-1904 "ENCFF121XGX,ENCFF664XIQ" HiSeq 4000 2016-09-16T03:21:50.425625+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyfqj0369BvpJbQkBjPZPP ENCSR590KEQ https://www.encodeproject.org/experiments/ENCSR590KEQ transcription factor ARNT-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF699XZD https://www.encodeproject.org/files/ENCFF699XZD/@@download/ENCFF699XZD.bam ENCFF608SVW https://www.encodeproject.org/files/ENCFF608SVW/@@download/ENCFF608SVW.bam 69.1 M 0 66.3 M 0.959 PE 100 100 native 29.2 M 0.0 M 16.9 M 0.489 0.58 0.58 2.45 240 1.20 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac81515b-9058-47e8-ad9f-b0911b642eb8/@@download/cross_correlation_plot/ENCFF673POIENCFF046BNP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB597UMY michael-snyder:L-1905 "ENCFF046BNP,ENCFF673POI" HiSeq 4000 2016-09-16T03:18:27.882474+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyg0003691J6Q87Vq89p5X ENCSR014YCR https://www.encodeproject.org/experiments/ENCSR014YCR transcription factor ATF7-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF556ZRU https://www.encodeproject.org/files/ENCFF556ZRU/@@download/ENCFF556ZRU.bam ENCFF141CYV https://www.encodeproject.org/files/ENCFF141CYV/@@download/ENCFF141CYV.bam 45.7 M 0 44.7 M 0.979 PE 100 100 native 20.0 M 0.0 M 17.0 M 0.743 0.85 0.85 6.58 225 1.42 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/510f6204-8d1a-4f4e-887f-1c5dc35194e5/@@download/cross_correlation_plot/ENCFF044LTSENCFF531UQG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB591TTK michael-snyder:L-1738 "ENCFF531UQG,ENCFF044LTS" HiSeq 2000 2017-01-26T00:24:00.063708+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB500369JXY1K3433pQKz ENCSR014YCR https://www.encodeproject.org/experiments/ENCSR014YCR transcription factor ATF7-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF860ICZ https://www.encodeproject.org/files/ENCFF860ICZ/@@download/ENCFF860ICZ.bam ENCFF251IUU https://www.encodeproject.org/files/ENCFF251IUU/@@download/ENCFF251IUU.bam 42.3 M 0 41.6 M 0.984 PE 100 100 native 18.7 M 0.0 M 17.0 M 0.805 0.91 0.91 11.26 235 1.45 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/e09974b9-6bcd-4a97-8173-249d139549cf/@@download/cross_correlation_plot/ENCFF317NXGENCFF741BVE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB339BXX michael-snyder:L-1739 "ENCFF317NXG,ENCFF741BVE" HiSeq 2000 2017-01-26T00:23:32.796468+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBPQ03692VYPz2806PPZJ ENCSR636MKU https://www.encodeproject.org/experiments/ENCSR636MKU transcription factor BACH1-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF688OKC https://www.encodeproject.org/files/ENCFF688OKC/@@download/ENCFF688OKC.bam ENCFF792QLV https://www.encodeproject.org/files/ENCFF792QLV/@@download/ENCFF792QLV.bam 72.6 M 0 62.0 M 0.854 PE 100 100 native 27.7 M 0.0 M 23.2 M 0.639 0.84 0.84 6.10 185 1.13 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/31c1da62-8e9a-43e4-9518-8df0be09a24f/@@download/cross_correlation_plot/ENCFF445LTVENCFF159UKF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB496SZH michael-snyder:L-3124 "ENCFF159UKF,ENCFF445LTV" HiSeq 4000 2017-01-28T04:51:08.499771+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJFQ0369FB2f75bZ9V3fb ENCSR636MKU https://www.encodeproject.org/experiments/ENCSR636MKU transcription factor BACH1-human GM12878 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF599CQU https://www.encodeproject.org/files/ENCFF599CQU/@@download/ENCFF599CQU.bam ENCFF649NJP https://www.encodeproject.org/files/ENCFF649NJP/@@download/ENCFF649NJP.bam 58.8 M 0 51.2 M 0.871 PE 100 100 native 23.3 M 0.0 M 20.5 M 0.698 0.88 0.88 8.43 155 1.20 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/b143ba51-8ef2-4f62-a456-a17d1b737a3f/@@download/cross_correlation_plot/ENCFF540RXLENCFF907SBN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB881RGF michael-snyder:L-3125 "ENCFF540RXL,ENCFF907SBN" HiSeq 4000 2017-01-28T04:50:19.656855+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJQj0369JXx505Zb65ZQg ENCSR469WII https://www.encodeproject.org/experiments/ENCSR469WII "transcription factor,chromatin remodeller" BMI1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF023IKP https://www.encodeproject.org/files/ENCFF023IKP/@@download/ENCFF023IKP.bam ENCFF661JYJ https://www.encodeproject.org/files/ENCFF661JYJ/@@download/ENCFF661JYJ.bam 87.0 M 0 84.8 M 0.975 PE 100 100 native 37.4 M 0.0 M 30.7 M 0.706 0.82 0.82 5.29 210 1.07 3.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/0faeeabe-d18b-4fd5-b0c6-657a74417d5e/@@download/cross_correlation_plot/ENCFF422BBZENCFF580NZZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB194CMR michael-snyder:L-3042 "ENCFF422BBZ,ENCFF580NZZ" HiSeq 4000 2016-10-27T22:22:40.843512+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bk9Q0369GJ6xQfbB7F5xg ENCSR469WII https://www.encodeproject.org/experiments/ENCSR469WII "transcription factor,chromatin remodeller" BMI1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF653RTQ https://www.encodeproject.org/files/ENCFF653RTQ/@@download/ENCFF653RTQ.bam ENCFF782ZPU https://www.encodeproject.org/files/ENCFF782ZPU/@@download/ENCFF782ZPU.bam 113.7 M 0 111.1 M 0.977 PE 100 100 native 49.4 M 0.0 M 35.8 M 0.629 0.72 0.71 3.35 210 1.09 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/79d68983-a3d1-43b8-a707-7d33946c22c7/@@download/cross_correlation_plot/ENCFF304NDLENCFF340BKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB675VMV michael-snyder:L-3043 "ENCFF340BKZ,ENCFF304NDL" HiSeq 4000 2016-10-27T22:23:38.992403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bkJ003695YX1xgJBKFkZZ ENCSR000DZS https://www.encodeproject.org/experiments/ENCSR000DZS transcription factor BRCA1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF651OUX https://www.encodeproject.org/files/ENCFF651OUX/@@download/ENCFF651OUX.bam ENCFF723BPZ https://www.encodeproject.org/files/ENCFF723BPZ/@@download/ENCFF723BPZ.bam 22.5 M 0 21.0 M 0.933 SE 36 28 28 0.0 M 14.5 M 14.3 M 0.634 0.98 0.98 55.82 90 1.06 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e738a94-b176-4a79-b352-d08f250a6e6f/@@download/cross_correlation_plot/ENCFF000VSY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASQ ENCFF000VSY Illumina Genome Analyzer 2017-01-05T21:28:43.645374+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bxQ0369PjBfKG4QzQx0b ENCSR000DZS https://www.encodeproject.org/experiments/ENCSR000DZS transcription factor BRCA1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF365KGA https://www.encodeproject.org/files/ENCFF365KGA/@@download/ENCFF365KGA.bam ENCFF290MTO https://www.encodeproject.org/files/ENCFF290MTO/@@download/ENCFF290MTO.bam 30.3 M 0 28.4 M 0.937 SE 36 28 28 0.0 M 19.5 M 18.9 M 0.623 0.97 0.97 33.03 125 1.05 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/c307e203-6a62-4ff3-a55d-a97b09536b9d/@@download/cross_correlation_plot/ENCFF000VTI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUZ ENCFF000VTI Illumina Genome Analyzer 2017-01-05T21:29:17.173099+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7f280369Pyf0JG49f333J ENCSR681NOM https://www.encodeproject.org/experiments/ENCSR681NOM transcription factor CEBPB-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF787QFQ https://www.encodeproject.org/files/ENCFF787QFQ/@@download/ENCFF787QFQ.bam ENCFF323BGI https://www.encodeproject.org/files/ENCFF323BGI/@@download/ENCFF323BGI.bam 24.5 M 0 24.2 M 0.986 SE 36 36 native 0.0 M 18.5 M 18.3 M 0.746 0.99 0.99 110.20 90 1.02 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c60ed1a-5ac2-47fd-abdd-b0b914a53320/@@download/cross_correlation_plot/ENCFF002ECY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB031VEK michael-snyder:CEBP beta_sc150_GM12878_Rep1 ENCFF002ECY Illumina Genome Analyzer IIx 2016-10-09T17:08:21.847599+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fyj0jv1XvFGkBjjfjPvk ENCSR681NOM https://www.encodeproject.org/experiments/ENCSR681NOM transcription factor CEBPB-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF462BSP https://www.encodeproject.org/files/ENCFF462BSP/@@download/ENCFF462BSP.bam ENCFF810XMW https://www.encodeproject.org/files/ENCFF810XMW/@@download/ENCFF810XMW.bam 21.4 M 0 21.0 M 0.982 SE 36 36 native 0.0 M 16.0 M 15.2 M 0.711 0.95 0.95 20.28 110 1.03 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f117322-b2d9-4d78-8235-6362474cc983/@@download/cross_correlation_plot/ENCFF002EDA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB241ASD michael-snyder:CEBP beta_sc150_GM12878_Rep2 ENCFF002EDA Illumina Genome Analyzer IIx 2016-10-09T17:08:12.813280+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3g080jv1xPyfX78Yz4gKp ENCSR347NOB https://www.encodeproject.org/experiments/ENCSR347NOB "RNA binding protein,transcription factor" CEBPZ-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF917WPY https://www.encodeproject.org/files/ENCFF917WPY/@@download/ENCFF917WPY.bam ENCFF878WNM https://www.encodeproject.org/files/ENCFF878WNM/@@download/ENCFF878WNM.bam 24.9 M 0 22.2 M 0.892 SE 36 36 native 0.0 M 16.9 M 15.8 M 0.635 0.94 0.94 15.97 110 1.04 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/d90764eb-46e5-42d8-9e3b-c7d686473a7f/@@download/cross_correlation_plot/ENCFF818LOF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB978QCG michael-snyder:L-603 ENCFF818LOF Illumina Genome Analyzer IIx 2016-10-09T17:33:38.830957+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4b5Q0jv1QxJBfj5Zb2q6J ENCSR347NOB https://www.encodeproject.org/experiments/ENCSR347NOB "RNA binding protein,transcription factor" CEBPZ-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF923TDM https://www.encodeproject.org/files/ENCFF923TDM/@@download/ENCFF923TDM.bam ENCFF267KMU https://www.encodeproject.org/files/ENCFF267KMU/@@download/ENCFF267KMU.bam 34.1 M 0 32.6 M 0.956 SE 36 36 native 0.0 M 25.8 M 24.3 M 0.713 0.95 0.95 18.72 135 1.03 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/2434cdb8-f90a-48e3-aa65-fff828a814a6/@@download/cross_correlation_plot/ENCFF079VLS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB860FVB michael-snyder:L-606 ENCFF079VLS Illumina Genome Analyzer IIx 2016-10-09T17:34:15.377811+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4b6j0jv1XYYX2Fxk3f5bG ENCSR000DZE https://www.encodeproject.org/experiments/ENCSR000DZE "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF933NBT https://www.encodeproject.org/files/ENCFF933NBT/@@download/ENCFF933NBT.bam ENCFF701YQE https://www.encodeproject.org/files/ENCFF701YQE/@@download/ENCFF701YQE.bam 25.4 M 0 23.4 M 0.923 SE 36 28 28 0.0 M 16.8 M 15.9 M 0.626 0.95 0.95 19.75 110 1.10 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6070bf0-8387-445c-bfa6-2ba52463d908/@@download/cross_correlation_plot/ENCFF000VTK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIP ENCFF000VTK Illumina Genome Analyzer 2017-01-05T21:29:10.458294+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bj80369Kbx0VG4x7400p ENCSR000DZE https://www.encodeproject.org/experiments/ENCSR000DZE "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF065BQF https://www.encodeproject.org/files/ENCFF065BQF/@@download/ENCFF065BQF.bam ENCFF698OEZ https://www.encodeproject.org/files/ENCFF698OEZ/@@download/ENCFF698OEZ.bam 22.6 M 0 22.1 M 0.977 SE 36 28 28 0.0 M 15.7 M 15.3 M 0.678 0.98 0.98 40.33 105 1.04 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed4667b1-029e-445c-ba8c-0c8233a216c6/@@download/cross_correlation_plot/ENCFF000VTM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIQ ENCFF000VTM Illumina Genome Analyzer 2017-01-05T21:29:01.826538+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bpQ03697FPkPG58gbpZ9 ENCSR000DZR https://www.encodeproject.org/experiments/ENCSR000DZR "RNA binding protein,transcription factor" CHD2-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF055UMJ https://www.encodeproject.org/files/ENCFF055UMJ/@@download/ENCFF055UMJ.bam ENCFF201PVR https://www.encodeproject.org/files/ENCFF201PVR/@@download/ENCFF201PVR.bam 25.1 M 0 24.0 M 0.954 SE 36 28 28 0.0 M 17.4 M 16.7 M 0.667 0.96 0.97 36.43 150 1.25 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/12dd3366-fe04-4b94-97dc-2ad3d15867c2/@@download/cross_correlation_plot/ENCFF000VUP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAS ENCFF000VUP Illumina Genome Analyzer 2017-01-05T21:31:11.664222+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7VX003697FPkPG58gbpV4 ENCSR000DZR https://www.encodeproject.org/experiments/ENCSR000DZR "RNA binding protein,transcription factor" CHD2-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF188RRJ https://www.encodeproject.org/files/ENCFF188RRJ/@@download/ENCFF188RRJ.bam ENCFF354UXE https://www.encodeproject.org/files/ENCFF354UXE/@@download/ENCFF354UXE.bam 19.9 M 0 18.7 M 0.939 SE 36 28 28 0.0 M 13.2 M 12.9 M 0.647 0.98 0.98 71.13 115 1.30 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ba41bfd-ad2e-4a5c-a0c7-0b098bf8b799/@@download/cross_correlation_plot/ENCFF000VUO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAR ENCFF000VUO Illumina Genome Analyzer 2017-01-05T21:31:07.630492+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Vg803699GG65G542pjV2 ENCSR000DZN https://www.encodeproject.org/experiments/ENCSR000DZN "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF162QXM https://www.encodeproject.org/files/ENCFF162QXM/@@download/ENCFF162QXM.bam ENCFF869TVW https://www.encodeproject.org/files/ENCFF869TVW/@@download/ENCFF869TVW.bam 29.5 M 0 27.7 M 0.940 SE 36 28 28 0.0 M 22.2 M 16.6 M 0.562 0.75 0.84 9.91 95 4.93 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/a59e9ea2-b685-4531-9d7d-02f6961f3689/@@download/cross_correlation_plot/ENCFF000VUW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABM ENCFF000VUW Illumina Genome Analyzer 2017-01-05T21:18:39.057197+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7yFQ0369P4Vg0G4JKxZb6 ENCSR000DZN https://www.encodeproject.org/experiments/ENCSR000DZN "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF033WII https://www.encodeproject.org/files/ENCFF033WII/@@download/ENCFF033WII.bam ENCFF037QRA https://www.encodeproject.org/files/ENCFF037QRA/@@download/ENCFF037QRA.bam 16.4 M 0 14.8 M 0.903 SE 36 28 28 0.0 M 10.8 M 9.7 M 0.592 0.91 0.93 15.83 110 3.74 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e8048b3-f7b3-4eed-b348-29a366bd480f/@@download/cross_correlation_plot/ENCFF000VUU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABS ENCFF000VUU Illumina Genome Analyzer 2017-01-05T21:18:25.807299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7yV00369J2YG2G5JGYVk4 ENCSR000DYR https://www.encodeproject.org/experiments/ENCSR000DYR transcription factor CUX1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF313RZR https://www.encodeproject.org/files/ENCFF313RZR/@@download/ENCFF313RZR.bam ENCFF111WAU https://www.encodeproject.org/files/ENCFF111WAU/@@download/ENCFF111WAU.bam 25.0 M 0 21.5 M 0.859 SE 36 28 28 0.0 M 15.4 M 14.2 M 0.567 0.92 0.92 12.38 120 1.06 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1fc8e0b-f7df-4130-8c50-fa7acb69e423/@@download/cross_correlation_plot/ENCFF000VSS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGM ENCFF000VSS Illumina Genome Analyzer 2017-01-05T21:29:34.436266+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7b6Q0369Kbx0VG4x7400G ENCSR000DYR https://www.encodeproject.org/experiments/ENCSR000DYR transcription factor CUX1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF649NFF https://www.encodeproject.org/files/ENCFF649NFF/@@download/ENCFF649NFF.bam ENCFF876YXO https://www.encodeproject.org/files/ENCFF876YXO/@@download/ENCFF876YXO.bam 37.5 M 0 35.3 M 0.941 SE 36 28 28 0.0 M 26.2 M 24.4 M 0.650 0.93 0.93 14.79 130 1.04 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/495d8a3c-cdae-45c0-8070-67aa28ee4f16/@@download/cross_correlation_plot/ENCFF000VSV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADX ENCFF000VSV Illumina Genome Analyzer 2017-01-05T21:29:48.844665+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7b8j0369P4Vg0G4JKxZV8 ENCSR424SZN https://www.encodeproject.org/experiments/ENCSR424SZN transcription factor DPF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF674UAI https://www.encodeproject.org/files/ENCFF674UAI/@@download/ENCFF674UAI.bam ENCFF455SDW https://www.encodeproject.org/files/ENCFF455SDW/@@download/ENCFF455SDW.bam 36.5 M 0 35.2 M 0.964 PE 100 100 native 15.7 M 0.0 M 12.0 M 0.657 0.77 0.77 4.35 230 1.67 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/5aa2f767-104d-4122-857d-2115a36cbe1c/@@download/cross_correlation_plot/ENCFF827KRGENCFF875GFT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB577JEI michael-snyder:L-1918 "ENCFF875GFT,ENCFF827KRG" HiSeq 4000 2016-09-16T03:15:46.954256+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyxG00369GX4Qp1Gv142QB ENCSR424SZN https://www.encodeproject.org/experiments/ENCSR424SZN transcription factor DPF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF727HML https://www.encodeproject.org/files/ENCFF727HML/@@download/ENCFF727HML.bam ENCFF749COW https://www.encodeproject.org/files/ENCFF749COW/@@download/ENCFF749COW.bam 81.5 M 0 79.3 M 0.973 PE 100 100 native 35.6 M 0.0 M 32.0 M 0.786 0.90 0.90 9.82 200 1.42 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a687bc0-c6d4-49d6-90c6-ee86a5c1a61f/@@download/cross_correlation_plot/ENCFF030MZBENCFF767DGL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB015GDW michael-snyder:L-1919 "ENCFF767DGL,ENCFF030MZB" HiSeq 4000 2016-09-16T03:18:13.667767+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyxP803690qG5Zzk84B8ZQ ENCSR509FWH https://www.encodeproject.org/experiments/ENCSR509FWH transcription factor DPF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF768YUH https://www.encodeproject.org/files/ENCFF768YUH/@@download/ENCFF768YUH.bam ENCFF658QNN https://www.encodeproject.org/files/ENCFF658QNN/@@download/ENCFF658QNN.bam 96.7 M 0 66.0 M 0.682 PE 100 100 native 28.4 M 0.0 M 25.7 M 0.532 0.90 0.90 10.42 200 1.15 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/77f15b34-68ad-4d6c-8838-3c3340704d7c/@@download/cross_correlation_plot/ENCFF845GWEENCFF442RZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB100PSH michael-snyder:L-3416 "ENCFF845GWE,ENCFF442RZV" HiSeq 4000 2017-04-19T10:55:32.540545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q84q003696BK1qBYG12KYp ENCSR509FWH https://www.encodeproject.org/experiments/ENCSR509FWH transcription factor DPF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF022YLX https://www.encodeproject.org/files/ENCFF022YLX/@@download/ENCFF022YLX.bam ENCFF370FGY https://www.encodeproject.org/files/ENCFF370FGY/@@download/ENCFF370FGY.bam 86.8 M 0 64.0 M 0.737 PE 100 100 native 27.6 M 0.0 M 22.4 M 0.517 0.81 0.81 5.18 205 1.18 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/22df790a-680d-412e-b4b5-82d516a0ce69/@@download/cross_correlation_plot/ENCFF305XXHENCFF433QIM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB141ZDM michael-snyder:L-3417 "ENCFF433QIM,ENCFF305XXH" HiSeq 4000 2017-04-19T10:54:54.551885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q854803697B34KBY6268zz ENCSR000DYY https://www.encodeproject.org/experiments/ENCSR000DYY transcription factor E2F4-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF926BIU https://www.encodeproject.org/files/ENCFF926BIU/@@download/ENCFF926BIU.bam ENCFF781WSB https://www.encodeproject.org/files/ENCFF781WSB/@@download/ENCFF781WSB.bam 25.4 M 0 24.8 M 0.977 SE 36 28 28 0.0 M 17.9 M 17.2 M 0.676 0.96 0.96 25.78 120 1.08 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/1992ded3-72ba-46d3-ac70-b34b88fab66d/@@download/cross_correlation_plot/ENCFF000VUJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGW ENCFF000VUJ Illumina Genome Analyzer 2017-01-05T21:30:44.825885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Zk80369J2YG2G5JGYVb3 ENCSR000DYY https://www.encodeproject.org/experiments/ENCSR000DYY transcription factor E2F4-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF189DMF https://www.encodeproject.org/files/ENCFF189DMF/@@download/ENCFF189DMF.bam ENCFF804JMX https://www.encodeproject.org/files/ENCFF804JMX/@@download/ENCFF804JMX.bam 29.4 M 0 29.1 M 0.990 SE 36 28 28 0.0 M 20.9 M 20.3 M 0.688 0.97 0.97 32.45 120 1.05 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/dcfc1399-0029-4d08-9f0c-3eff4627f5e2/@@download/cross_correlation_plot/ENCFF000VUL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABC ENCFF000VUL Illumina Genome Analyzer 2017-01-05T21:30:35.723595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Zqj03697FPkPG58gbpYp ENCSR793HVL https://www.encodeproject.org/experiments/ENCSR793HVL transcription factor E2F8-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF879NVM https://www.encodeproject.org/files/ENCFF879NVM/@@download/ENCFF879NVM.bam ENCFF018TUW https://www.encodeproject.org/files/ENCFF018TUW/@@download/ENCFF018TUW.bam 46.0 M 0 45.1 M 0.982 PE 100 100 native 20.6 M 0.0 M 13.3 M 0.578 0.64 0.64 2.80 225 1.13 6.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/59b6c239-e424-4550-9904-eeb30fd992b0/@@download/cross_correlation_plot/ENCFF836FDGENCFF622NJV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB649UXL michael-snyder:L-1928 "ENCFF836FDG,ENCFF622NJV" HiSeq 2000 2016-10-09T17:11:10.710262+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fP00jv1XvFGkBjjfjPv9 ENCSR793HVL https://www.encodeproject.org/experiments/ENCSR793HVL transcription factor E2F8-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF009QHM https://www.encodeproject.org/files/ENCFF009QHM/@@download/ENCFF009QHM.bam ENCFF155FNB https://www.encodeproject.org/files/ENCFF155FNB/@@download/ENCFF155FNB.bam 46.1 M 0 45.1 M 0.979 PE 100 100 native 20.5 M 0.0 M 17.1 M 0.740 0.83 0.83 5.58 235 1.11 4.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/5aeebe96-efa8-4733-ad94-cbceb54a025a/@@download/cross_correlation_plot/ENCFF252LIUENCFF207YYY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB361PIO michael-snyder:L-1929 "ENCFF252LIU,ENCFF207YYY" HiSeq 2000 2016-10-09T17:11:57.323490+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fQQ0jv1vY92b0GYjVFK5 ENCSR000DZQ https://www.encodeproject.org/experiments/ENCSR000DZQ transcription factor EBF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF746KYL https://www.encodeproject.org/files/ENCFF746KYL/@@download/ENCFF746KYL.bam ENCFF891JOR https://www.encodeproject.org/files/ENCFF891JOR/@@download/ENCFF891JOR.bam 42.3 M 0 36.5 M 0.862 SE 36 28 28 0.0 M 26.0 M 23.6 M 0.558 0.91 0.92 13.61 135 1.40 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ad5e08d-5708-4952-b8a9-892cfc6a44f9/@@download/cross_correlation_plot/ENCFF000VVP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APR ENCFF000VVP Illumina Genome Analyzer 2017-01-05T21:21:46.313637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7vZQ0369J2YG2G5JGYVjG ENCSR000DZQ https://www.encodeproject.org/experiments/ENCSR000DZQ transcription factor EBF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF340SPK https://www.encodeproject.org/files/ENCFF340SPK/@@download/ENCFF340SPK.bam ENCFF891SOM https://www.encodeproject.org/files/ENCFF891SOM/@@download/ENCFF891SOM.bam 30.2 M 0 27.6 M 0.915 SE 36 28 28 0.0 M 21.1 M 18.2 M 0.604 0.87 0.92 15.75 110 2.24 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/5df94b45-a989-46a3-8f22-81cb2354c140/@@download/cross_correlation_plot/ENCFF000VVQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APS ENCFF000VVQ Illumina Genome Analyzer 2017-01-05T21:21:08.780779+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7vkQ03697J9fxG4f90kbQ ENCSR841NDX https://www.encodeproject.org/experiments/ENCSR841NDX transcription factor ELF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF028TNY https://www.encodeproject.org/files/ENCFF028TNY/@@download/ENCFF028TNY.bam ENCFF555KDG https://www.encodeproject.org/files/ENCFF555KDG/@@download/ENCFF555KDG.bam 97.4 M 0 94.1 M 0.965 PE 100 100 native 41.8 M 0.0 M 36.2 M 0.742 0.87 0.86 7.32 155 1.38 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9504b5e-9a66-4640-b25f-a849ad62820f/@@download/cross_correlation_plot/ENCFF164VNMENCFF825EGN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB597RSH michael-snyder:L-3507 "ENCFF164VNM,ENCFF825EGN" HiSeq 4000 2017-06-23T03:14:01.714922+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Zp80369FxjJB131Zqf5p ENCSR841NDX https://www.encodeproject.org/experiments/ENCSR841NDX transcription factor ELF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF444PPF https://www.encodeproject.org/files/ENCFF444PPF/@@download/ENCFF444PPF.bam ENCFF816AFX https://www.encodeproject.org/files/ENCFF816AFX/@@download/ENCFF816AFX.bam 116.1 M 0 112.0 M 0.965 PE 100 100 native 50.0 M 0.0 M 40.1 M 0.691 0.80 0.80 4.89 175 1.34 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/83ff0a91-6f7b-4237-a4c5-c4f880a57f84/@@download/cross_correlation_plot/ENCFF862VDDENCFF814SDG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB081NDC michael-snyder:L-3508 "ENCFF814SDG,ENCFF862VDD" HiSeq 4000 2017-06-23T04:28:57.426731+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Zxj0369841Zz13XjfZvJ ENCSR000DZB https://www.encodeproject.org/experiments/ENCSR000DZB transcription factor ELK1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF211VKF https://www.encodeproject.org/files/ENCFF211VKF/@@download/ENCFF211VKF.bam ENCFF766YFE https://www.encodeproject.org/files/ENCFF766YFE/@@download/ENCFF766YFE.bam 30.1 M 0 29.4 M 0.978 SE 36 28 28 0.0 M 21.3 M 20.2 M 0.670 0.95 0.96 30.56 115 1.04 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/44b5649a-b5e0-459b-8925-b85852a93c9e/@@download/cross_correlation_plot/ENCFF000VUY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFT ENCFF000VUY Illumina Genome Analyzer 2017-01-05T21:30:42.543618+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7b1j0369Pyf0JG49f332g ENCSR000DZB https://www.encodeproject.org/experiments/ENCSR000DZB transcription factor ELK1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF784XUE https://www.encodeproject.org/files/ENCFF784XUE/@@download/ENCFF784XUE.bam ENCFF156QYK https://www.encodeproject.org/files/ENCFF156QYK/@@download/ENCFF156QYK.bam 29.2 M 0 27.8 M 0.953 SE 36 28 28 0.0 M 19.8 M 18.6 M 0.639 0.94 0.94 17.61 110 1.05 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/a21fa6f3-3456-4182-b54a-de5958952334/@@download/cross_correlation_plot/ENCFF000VVA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFU ENCFF000VVA Illumina Genome Analyzer 2017-01-05T21:29:59.715409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7b400369Pyf0JG49f332z ENCSR000DZD https://www.encodeproject.org/experiments/ENCSR000DZD transcription factor EP300-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF036AJQ https://www.encodeproject.org/files/ENCFF036AJQ/@@download/ENCFF036AJQ.bam ENCFF497KQT https://www.encodeproject.org/files/ENCFF497KQT/@@download/ENCFF497KQT.bam 28.7 M 0 27.6 M 0.959 SE 36 28 28 0.0 M 20.3 M 18.5 M 0.642 0.91 0.91 10.81 130 1.18 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/55136491-3eec-491d-97ef-a56517f83b88/@@download/cross_correlation_plot/ENCFF000WAM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB838QPB michael-snyder:P300_sc585_GM12878_Rep1 ENCFF000WAM Illumina Genome Analyzer IIx 2017-01-05T21:25:56.928459+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7k500369J2YG2G5JGYVg1 ENCSR000DZD https://www.encodeproject.org/experiments/ENCSR000DZD transcription factor EP300-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF881THF https://www.encodeproject.org/files/ENCFF881THF/@@download/ENCFF881THF.bam ENCFF273YVM https://www.encodeproject.org/files/ENCFF273YVM/@@download/ENCFF273YVM.bam 25.1 M 0 24.2 M 0.965 SE 36 28 28 0.0 M 17.6 M 16.3 M 0.651 0.93 0.93 14.32 130 1.08 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/79bdae8c-5c6e-4406-ba6f-9b0da71efcd8/@@download/cross_correlation_plot/ENCFF000WAO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB644STJ michael-snyder:P300_sc585_GM12878_Rep2 ENCFF000WAO Illumina Genome Analyzer IIx 2017-01-05T21:25:48.828487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7kK803699GG65G542pjZ2 ENCSR000DZG https://www.encodeproject.org/experiments/ENCSR000DZG transcription factor EP300-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF120MJN https://www.encodeproject.org/files/ENCFF120MJN/@@download/ENCFF120MJN.bam ENCFF084NIJ https://www.encodeproject.org/files/ENCFF084NIJ/@@download/ENCFF084NIJ.bam 19.2 M 0 18.9 M 0.988 SE 36 28 28 0.0 M 13.7 M 13.5 M 0.703 0.98 0.98 66.67 120 1.28 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec75d210-a84c-4562-8a0a-366a4895dfe4/@@download/cross_correlation_plot/ENCFF000WAV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATY ENCFF000WAV Illumina Genome Analyzer 2017-01-05T21:21:25.303015+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7vzQ0369Kbx0VG4x7403q ENCSR000DZG https://www.encodeproject.org/experiments/ENCSR000DZG transcription factor EP300-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF832UST https://www.encodeproject.org/files/ENCFF832UST/@@download/ENCFF832UST.bam ENCFF241IKD https://www.encodeproject.org/files/ENCFF241IKD/@@download/ENCFF241IKD.bam 20.6 M 0 20.2 M 0.981 SE 36 28 28 0.0 M 14.7 M 14.2 M 0.688 0.97 0.97 31.24 110 1.10 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0a249c6-55e5-4fcd-9c49-caa1ef962bfd/@@download/cross_correlation_plot/ENCFF000WAX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEJ ENCFF000WAX Illumina Genome Analyzer 2017-01-05T21:18:30.108780+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7x500369Kbx0VG4x74044 ENCSR597VGC https://www.encodeproject.org/experiments/ENCSR597VGC transcription factor ETV6-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF235FDS https://www.encodeproject.org/files/ENCFF235FDS/@@download/ENCFF235FDS.bam ENCFF865MRA https://www.encodeproject.org/files/ENCFF865MRA/@@download/ENCFF865MRA.bam 57.0 M 0 55.8 M 0.979 PE 100 100 native 25.1 M 0.0 M 15.3 M 0.537 0.61 0.58 2.18 220 1.10 16.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/e799c872-92f9-4ae6-9385-f0c7f505bed7/@@download/cross_correlation_plot/ENCFF002EKBENCFF002EKC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB417CPA michael-snyder:795_A_TruSeq_ATCACG "ENCFF002EKC,ENCFF002EKB" HiSeq 2000 2016-10-09T17:06:02.797990+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6FQ00jv1vY92b0GYjVGJ1 ENCSR597VGC https://www.encodeproject.org/experiments/ENCSR597VGC transcription factor ETV6-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF714EVJ https://www.encodeproject.org/files/ENCFF714EVJ/@@download/ENCFF714EVJ.bam ENCFF642CBH https://www.encodeproject.org/files/ENCFF642CBH/@@download/ENCFF642CBH.bam 61.2 M 0 59.9 M 0.978 PE 100 100 native 26.9 M 0.0 M 16.8 M 0.548 0.62 0.60 2.26 210 1.09 14.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/01467262-48ce-4126-a864-3a43bbb1793c/@@download/cross_correlation_plot/ENCFF002EJZENCFF002EKA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB748PSO michael-snyder:795_A_TruSeq_CGATGT "ENCFF002EJZ,ENCFF002EKA" HiSeq 2000 2016-10-09T17:06:17.886358+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6FX00jv1XvFGkBjjfjV0J ENCSR861JUQ https://www.encodeproject.org/experiments/ENCSR861JUQ transcription factor FOXK2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF754BHC https://www.encodeproject.org/files/ENCFF754BHC/@@download/ENCFF754BHC.bam ENCFF906XQL https://www.encodeproject.org/files/ENCFF906XQL/@@download/ENCFF906XQL.bam 172.4 M 0 155.2 M 0.900 PE 100 100 native 65.9 M 0.0 M 55.0 M 0.638 0.84 0.83 5.93 230 1.07 3.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5e18903-fddf-410c-8dc8-3c1d96543a6a/@@download/cross_correlation_plot/ENCFF108FHIENCFF863MQV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB344OMN michael-snyder:L-1940 "ENCFF863MQV,ENCFF108FHI" HiSeq 4000 2017-01-24T19:08:49.988360+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23881Q0369JF4QP8xxppGqg ENCSR861JUQ https://www.encodeproject.org/experiments/ENCSR861JUQ transcription factor FOXK2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF469MPJ https://www.encodeproject.org/files/ENCFF469MPJ/@@download/ENCFF469MPJ.bam ENCFF006TBL https://www.encodeproject.org/files/ENCFF006TBL/@@download/ENCFF006TBL.bam 181.7 M 0 167.0 M 0.919 PE 100 100 native 70.9 M 0.0 M 55.6 M 0.612 0.79 0.78 4.48 230 1.08 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bfc33e6-4112-4e40-a5a6-f08e58b7c0a9/@@download/cross_correlation_plot/ENCFF783FYLENCFF923XLP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB000IIU michael-snyder:L-1941 "ENCFF783FYL,ENCFF923XLP" HiSeq 4000 2017-01-24T21:21:44.512208+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23887j0369BQ3qg2vYVYbb2 ENCSR828NCB https://www.encodeproject.org/experiments/ENCSR828NCB transcription factor GATAD2B-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF831ANK https://www.encodeproject.org/files/ENCFF831ANK/@@download/ENCFF831ANK.bam ENCFF258PBX https://www.encodeproject.org/files/ENCFF258PBX/@@download/ENCFF258PBX.bam 114.2 M 0 55.8 M 0.489 PE 100 100 native 24.1 M 0.0 M 19.5 M 0.341 0.81 0.81 5.14 205 1.15 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/2166cd1d-25ea-4807-bd80-f1655d1a92c6/@@download/cross_correlation_plot/ENCFF785LRFENCFF023QAR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB122YZP michael-snyder:L-3418 "ENCFF785LRF,ENCFF023QAR" HiSeq 4000 2017-04-19T10:54:58.156447+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q82QQ0369B30JzPPqz8xVf ENCSR828NCB https://www.encodeproject.org/experiments/ENCSR828NCB transcription factor GATAD2B-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF159BQG https://www.encodeproject.org/files/ENCFF159BQG/@@download/ENCFF159BQG.bam ENCFF115DER https://www.encodeproject.org/files/ENCFF115DER/@@download/ENCFF115DER.bam 67.6 M 0 51.4 M 0.760 PE 100 100 native 21.7 M 0.0 M 16.3 M 0.482 0.75 0.75 3.90 225 1.15 2.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/1604cbb3-e4f3-434f-b8b5-68868e14889c/@@download/cross_correlation_plot/ENCFF263DDPENCFF861XUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB501GUQ michael-snyder:L-3419 "ENCFF263DDP,ENCFF861XUI" HiSeq 4000 2017-04-19T17:29:19.903490+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q84VQ0369B068GBZ3fGqP2 ENCSR769ZTN https://www.encodeproject.org/experiments/ENCSR769ZTN "RNA binding protein,transcription factor" GTF2F1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF713LXM https://www.encodeproject.org/files/ENCFF713LXM/@@download/ENCFF713LXM.bam ENCFF364SUT https://www.encodeproject.org/files/ENCFF364SUT/@@download/ENCFF364SUT.bam 58.9 M 0 57.1 M 0.969 PE 100 100 native 25.8 M 0.0 M 16.4 M 0.558 0.64 0.62 2.48 220 1.12 7.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/89d81bd2-ff5a-40ed-a9c0-d1489a4202c1/@@download/cross_correlation_plot/ENCFF002ELMENCFF002ELL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB145AYK michael-snyder:819_A_truseq_ATCACG "ENCFF002ELM,ENCFF002ELL" HiSeq 2000 2016-10-29T18:02:50.270578+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29V00jv1vJ6xQfbB7FXfX ENCSR769ZTN https://www.encodeproject.org/experiments/ENCSR769ZTN "RNA binding protein,transcription factor" GTF2F1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF674GBA https://www.encodeproject.org/files/ENCFF674GBA/@@download/ENCFF674GBA.bam ENCFF416KMC https://www.encodeproject.org/files/ENCFF416KMC/@@download/ENCFF416KMC.bam 62.9 M 0 61.3 M 0.974 PE 100 100 native 27.5 M 0.0 M 24.4 M 0.776 0.89 0.89 9.21 220 1.09 4.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c741802-a43a-4665-a6fd-da280808f04d/@@download/cross_correlation_plot/ENCFF002ELKENCFF002ELJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB013SSP michael-snyder:819_A_truseq_CGATGT "ENCFF002ELK,ENCFF002ELJ" HiSeq 2000 2016-10-29T18:03:44.160563+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29Z00jv1pX1xqb1B8192q ENCSR514VAY https://www.encodeproject.org/experiments/ENCSR514VAY transcription factor HCFC1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF019MMH https://www.encodeproject.org/files/ENCFF019MMH/@@download/ENCFF019MMH.bam ENCFF209LCU https://www.encodeproject.org/files/ENCFF209LCU/@@download/ENCFF209LCU.bam 33.2 M 0 32.3 M 0.972 SE 36 36 native 0.0 M 24.5 M 23.4 M 0.706 0.96 0.96 25.13 110 1.13 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/784141bb-0616-45f3-96e5-5f249e6419f9/@@download/cross_correlation_plot/ENCFF002EAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB339IXL michael-snyder:HCFC1_NB100-68209_GM12878_Rep1 ENCFF002EAN Illumina Genome Analyzer IIx 2016-10-09T17:09:41.347254+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40400jv1zBYbxYJ5zzz41 ENCSR514VAY https://www.encodeproject.org/experiments/ENCSR514VAY transcription factor HCFC1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF057WQP https://www.encodeproject.org/files/ENCFF057WQP/@@download/ENCFF057WQP.bam ENCFF601BPA https://www.encodeproject.org/files/ENCFF601BPA/@@download/ENCFF601BPA.bam 32.9 M 0 31.8 M 0.966 SE 36 36 native 0.0 M 24.4 M 22.9 M 0.697 0.94 0.95 20.36 115 1.19 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a73214a-bb08-4353-be78-259c89ba69dc/@@download/cross_correlation_plot/ENCFF002EAO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB211NAT michael-snyder:HCFC1_NB100-68209_GM12878_Rep2 ENCFF002EAO Illumina Genome Analyzer IIx 2016-10-09T17:09:47.679314+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40580jv1zBYbxYJ5zzz4B ENCSR145XQO https://www.encodeproject.org/experiments/ENCSR145XQO "RNA binding protein,transcription factor" HDGF-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF121WPI https://www.encodeproject.org/files/ENCFF121WPI/@@download/ENCFF121WPI.bam ENCFF186XNP https://www.encodeproject.org/files/ENCFF186XNP/@@download/ENCFF186XNP.bam 83.8 M 0 81.9 M 0.978 PE 100 100 native 36.5 M 0.0 M 36.4 M 0.868 1.00 1.00 299.02 205 1.06 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/387d55c8-6344-4b4d-9e6a-71ca580f057b/@@download/cross_correlation_plot/ENCFF088UFAENCFF918XGV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB722AKA michael-snyder:L-1950 "ENCFF918XGV,ENCFF088UFA" HiSeq 2000 2016-10-09T17:19:44.369620+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fF00jv1XvFGkBjjfjPv0 ENCSR145XQO https://www.encodeproject.org/experiments/ENCSR145XQO "RNA binding protein,transcription factor" HDGF-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF773BVT https://www.encodeproject.org/files/ENCFF773BVT/@@download/ENCFF773BVT.bam ENCFF189AGH https://www.encodeproject.org/files/ENCFF189AGH/@@download/ENCFF189AGH.bam 80.2 M 0 78.5 M 0.979 PE 100 100 native 34.9 M 0.0 M 34.7 M 0.866 1.00 1.00 234.01 205 1.06 2.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/a151a292-86bc-4625-8a1d-1c03e7f9b6b7/@@download/cross_correlation_plot/ENCFF690LCGENCFF019KRR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB434KMC michael-snyder:L-1951 "ENCFF690LCG,ENCFF019KRR" HiSeq 2000 2016-10-09T17:15:21.523182+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fGj0jv1vY92b0GYjVFJv ENCSR440TOE https://www.encodeproject.org/experiments/ENCSR440TOE transcription factor HES1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF980FPB https://www.encodeproject.org/files/ENCFF980FPB/@@download/ENCFF980FPB.bam ENCFF922DSR https://www.encodeproject.org/files/ENCFF922DSR/@@download/ENCFF922DSR.bam 88.4 M 0 79.8 M 0.902 PE 100 100 native 34.6 M 0.0 M 30.5 M 0.690 0.88 0.88 8.41 220 1.07 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/adbfec47-233f-4332-a0a3-adbd9fe4758e/@@download/cross_correlation_plot/ENCFF640XCKENCFF371PJR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB471LQJ michael-snyder:L-1952 "ENCFF371PJR,ENCFF640XCK" HiSeq 4000 2016-11-02T23:13:02.114794+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbXf80369GGYp0V19j80g5 ENCSR440TOE https://www.encodeproject.org/experiments/ENCSR440TOE transcription factor HES1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF521KQS https://www.encodeproject.org/files/ENCFF521KQS/@@download/ENCFF521KQS.bam ENCFF757MVU https://www.encodeproject.org/files/ENCFF757MVU/@@download/ENCFF757MVU.bam 180.6 M 0 162.3 M 0.899 PE 100 100 native 70.2 M 0.0 M 51.1 M 0.566 0.73 0.72 3.56 220 1.03 3.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2e5299b-618b-4f1d-8574-553ca955c0d5/@@download/cross_correlation_plot/ENCFF726SZTENCFF091GAR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB390LQO michael-snyder:L-1953 "ENCFF726SZT,ENCFF091GAR" HiSeq 4000 2016-11-02T23:21:33.969007+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbZ2j03693PqK5QxbZZvyZ ENCSR441VHN https://www.encodeproject.org/experiments/ENCSR441VHN transcription factor IKZF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF723MRH https://www.encodeproject.org/files/ENCFF723MRH/@@download/ENCFF723MRH.bam ENCFF862UTF https://www.encodeproject.org/files/ENCFF862UTF/@@download/ENCFF862UTF.bam 115.0 M 0 83.8 M 0.729 PE 100 100 native 36.4 M 0.0 M 30.3 M 0.527 0.83 0.83 5.95 215 1.23 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/a34de96d-498f-4847-b4a5-304a640e9684/@@download/cross_correlation_plot/ENCFF455PUNENCFF788SAX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB437BZH michael-snyder:L-3420 "ENCFF788SAX,ENCFF455PUN" HiSeq 4000 2017-05-05T23:21:39.834675+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vbj03698bkBg707zYXq8 ENCSR441VHN https://www.encodeproject.org/experiments/ENCSR441VHN transcription factor IKZF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF106ICW https://www.encodeproject.org/files/ENCFF106ICW/@@download/ENCFF106ICW.bam ENCFF503JBL https://www.encodeproject.org/files/ENCFF503JBL/@@download/ENCFF503JBL.bam 122.1 M 0 104.9 M 0.859 PE 100 100 native 46.5 M 0.0 M 39.6 M 0.649 0.85 0.85 6.61 195 1.27 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/7025143f-edb6-49ea-a73e-a8d5e8779b4e/@@download/cross_correlation_plot/ENCFF249RTDENCFF801ZZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB230GVY michael-snyder:L-3421 "ENCFF249RTD,ENCFF801ZZV" HiSeq 4000 2017-05-06T01:08:21.984807+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vkj03699xk39703jJy6z ENCSR874AFU https://www.encodeproject.org/experiments/ENCSR874AFU transcription factor IKZF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF625RFM https://www.encodeproject.org/files/ENCFF625RFM/@@download/ENCFF625RFM.bam ENCFF426ILM https://www.encodeproject.org/files/ENCFF426ILM/@@download/ENCFF426ILM.bam 126.9 M 0 112.0 M 0.883 PE 100 100 native 49.4 M 0.0 M 40.2 M 0.633 0.81 0.81 5.26 225 1.48 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e57d9c9-a68f-4ef2-9160-6ef47b2e1f8e/@@download/cross_correlation_plot/ENCFF202EJBENCFF914KKF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB743MHF michael-snyder:L-1954 "ENCFF202EJB,ENCFF914KKF" HiSeq 4000 2016-09-16T03:20:36.320001+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyxXj03692xk39gZV14K9Q ENCSR874AFU https://www.encodeproject.org/experiments/ENCSR874AFU transcription factor IKZF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF580EVG https://www.encodeproject.org/files/ENCFF580EVG/@@download/ENCFF580EVG.bam ENCFF491QSR https://www.encodeproject.org/files/ENCFF491QSR/@@download/ENCFF491QSR.bam 113.1 M 0 98.1 M 0.868 PE 100 100 native 42.9 M 0.0 M 35.3 M 0.625 0.82 0.82 5.54 230 1.13 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e26e574-a859-4048-8870-6edd393090a9/@@download/cross_correlation_plot/ENCFF970GQFENCFF592CBD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB190HWI michael-snyder:L-1955 "ENCFF592CBD,ENCFF970GQF" HiSeq 4000 2016-09-16T03:19:58.084772+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyxf8036945x1X1GjJQQ1G ENCSR000DZX https://www.encodeproject.org/experiments/ENCSR000DZX transcription factor IRF3-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF519GVE https://www.encodeproject.org/files/ENCFF519GVE/@@download/ENCFF519GVE.bam ENCFF489KNC https://www.encodeproject.org/files/ENCFF489KNC/@@download/ENCFF489KNC.bam 24.4 M 0 21.6 M 0.884 SE 36 28 28 0.0 M 15.1 M 13.3 M 0.544 0.88 0.88 8.13 150 1.07 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b0d2e74-bfb2-4053-90e0-7ff312c39924/@@download/cross_correlation_plot/ENCFF000VXD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEU ENCFF000VXD Illumina Genome Analyzer 2017-01-05T21:29:16.841393+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bK00369J2YG2G5JGYVbP ENCSR000DZX https://www.encodeproject.org/experiments/ENCSR000DZX transcription factor IRF3-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF935OOR https://www.encodeproject.org/files/ENCFF935OOR/@@download/ENCFF935OOR.bam ENCFF465UKD https://www.encodeproject.org/files/ENCFF465UKD/@@download/ENCFF465UKD.bam 30.7 M 0 28.3 M 0.924 SE 36 28 28 0.0 M 19.6 M 18.7 M 0.609 0.95 0.95 20.70 90 1.02 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/583e9280-2355-4f59-8db3-a59c604f4600/@@download/cross_correlation_plot/ENCFF000VXI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHR ENCFF000VXI Illumina Genome Analyzer 2017-01-05T21:29:14.932832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bY003697J9fxG4f90kX9 ENCSR408JQO https://www.encodeproject.org/experiments/ENCSR408JQO transcription factor IRF3-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF844CVM https://www.encodeproject.org/files/ENCFF844CVM/@@download/ENCFF844CVM.bam ENCFF897PRV https://www.encodeproject.org/files/ENCFF897PRV/@@download/ENCFF897PRV.bam 66.6 M 0 65.2 M 0.979 PE 100 100 native 29.1 M 0.0 M 24.8 M 0.744 0.85 0.85 6.52 175 1.09 10.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0fa365d-aa3e-490a-9497-fef513b5e59c/@@download/cross_correlation_plot/ENCFF002EKKENCFF002EKO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB482QLA michael-snyder:831_B_truseq_CAGATC "ENCFF002EKO,ENCFF002EKK" HiSeq 2000 2016-10-09T17:08:18.548331+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6BxQ0jv1f60PxyZ9JGPfB ENCSR408JQO https://www.encodeproject.org/experiments/ENCSR408JQO transcription factor IRF3-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF541BNH https://www.encodeproject.org/files/ENCFF541BNH/@@download/ENCFF541BNH.bam ENCFF345DIP https://www.encodeproject.org/files/ENCFF345DIP/@@download/ENCFF345DIP.bam 66.6 M 0 65.2 M 0.979 PE 100 100 native 29.1 M 0.0 M 25.0 M 0.751 0.86 0.86 6.89 170 1.09 8.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/07ecd5a6-7177-4df5-9d79-c741ba6dac43/@@download/cross_correlation_plot/ENCFF002EKLENCFF002EKR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB745AQU michael-snyder:831_B_truseq_GATCAG "ENCFF002EKR,ENCFF002EKL" HiSeq 2000 2016-10-09T17:11:30.651419+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6BzQ0jv1QxJBfj5Zb2q8G ENCSR657PEW https://www.encodeproject.org/experiments/ENCSR657PEW RNA binding protein LARP7-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF961JEB https://www.encodeproject.org/files/ENCFF961JEB/@@download/ENCFF961JEB.bam ENCFF389EQM https://www.encodeproject.org/files/ENCFF389EQM/@@download/ENCFF389EQM.bam 119.4 M 0 94.6 M 0.792 PE 100 100 native 41.3 M 0.0 M 36.2 M 0.606 0.88 0.88 8.03 185 1.08 3.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/af0f6a5f-45df-429c-a6d3-ef88b89a53a3/@@download/cross_correlation_plot/ENCFF704JSZENCFF266USZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB247TJX michael-snyder:L-3422 "ENCFF266USZ,ENCFF704JSZ" HiSeq 4000 2017-05-05T12:23:14.198536+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvk803698bZvg2JGkJ6QQ ENCSR657PEW https://www.encodeproject.org/experiments/ENCSR657PEW RNA binding protein LARP7-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF611ELI https://www.encodeproject.org/files/ENCFF611ELI/@@download/ENCFF611ELI.bam ENCFF862GLL https://www.encodeproject.org/files/ENCFF862GLL/@@download/ENCFF862GLL.bam 101.3 M 0 84.8 M 0.837 PE 100 100 native 36.9 M 0.0 M 32.2 M 0.635 0.87 0.87 7.61 210 1.07 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/98ab0e6d-ca5b-4ce8-8a0b-9ff42eecbd3d/@@download/cross_correlation_plot/ENCFF897TLHENCFF352LST.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB258SZT michael-snyder:L-3423 "ENCFF352LST,ENCFF897TLH" HiSeq 4000 2017-05-05T11:02:38.392081+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvvQ0369KY6Jp7Gj1pfQ6 ENCSR000DZF https://www.encodeproject.org/experiments/ENCSR000DZF transcription factor MAX-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF158TTY https://www.encodeproject.org/files/ENCFF158TTY/@@download/ENCFF158TTY.bam ENCFF746EMY https://www.encodeproject.org/files/ENCFF746EMY/@@download/ENCFF746EMY.bam 25.7 M 0 25.1 M 0.975 SE 36 28 28 0.0 M 18.2 M 17.6 M 0.682 0.97 0.97 31.10 110 1.09 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c40bd01-aef4-45c4-bd2f-ef968320c754/@@download/cross_correlation_plot/ENCFF000VXY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALR ENCFF000VXY Illumina Genome Analyzer 2017-01-05T21:31:22.205787+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Xp00369PjBfKG4QzQvz0 ENCSR000DZF https://www.encodeproject.org/experiments/ENCSR000DZF transcription factor MAX-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF577KAH https://www.encodeproject.org/files/ENCFF577KAH/@@download/ENCFF577KAH.bam ENCFF076XQH https://www.encodeproject.org/files/ENCFF076XQH/@@download/ENCFF076XQH.bam 27.9 M 0 27.4 M 0.982 SE 36 28 28 0.0 M 19.6 M 18.7 M 0.670 0.96 0.98 58.50 95 1.06 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5104324-79d1-42be-8e7a-b379966889c6/@@download/cross_correlation_plot/ENCFF000VYA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AED ENCFF000VYA Illumina Genome Analyzer 2017-01-05T21:31:13.113580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Xz803697FPkPG58gbpXg ENCSR000DZA https://www.encodeproject.org/experiments/ENCSR000DZA "RNA binding protein,transcription factor" MAZ-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF406RXQ https://www.encodeproject.org/files/ENCFF406RXQ/@@download/ENCFF406RXQ.bam ENCFF387JUO https://www.encodeproject.org/files/ENCFF387JUO/@@download/ENCFF387JUO.bam 30.9 M 0 28.8 M 0.934 SE 36 28 28 0.0 M 20.9 M 19.7 M 0.639 0.94 0.94 17.94 110 1.16 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9eafcdf-1211-4f92-8c5d-c83c066cb2ad/@@download/cross_correlation_plot/ENCFF000VYM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGC ENCFF000VYM Illumina Genome Analyzer 2017-01-05T21:26:08.299275+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7j300369J2YG2G5JGYVfj ENCSR000DZA https://www.encodeproject.org/experiments/ENCSR000DZA "RNA binding protein,transcription factor" MAZ-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF352KKZ https://www.encodeproject.org/files/ENCFF352KKZ/@@download/ENCFF352KKZ.bam ENCFF122OAU https://www.encodeproject.org/files/ENCFF122OAU/@@download/ENCFF122OAU.bam 30.4 M 0 30.0 M 0.986 SE 36 28 28 0.0 M 22.2 M 20.5 M 0.674 0.92 0.93 15.21 115 1.07 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d97ede8-58a7-40da-88e5-ccb8b2d3c968/@@download/cross_correlation_plot/ENCFF000VYO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGB ENCFF000VYO Illumina Genome Analyzer 2017-01-05T21:26:10.105386+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7j8Q03699GG65G542pjYG ENCSR177VFS https://www.encodeproject.org/experiments/ENCSR177VFS transcription factor MEF2B-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF549AQZ https://www.encodeproject.org/files/ENCFF549AQZ/@@download/ENCFF549AQZ.bam ENCFF256ACA https://www.encodeproject.org/files/ENCFF256ACA/@@download/ENCFF256ACA.bam 328.9 M 0 264.5 M 0.804 PE 100 100 native 116.8 M 0.0 M 52.1 M 0.317 0.45 0.41 1.56 230 1.18 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/1156e1e7-4165-40b1-877e-1149c5b4ad23/@@download/cross_correlation_plot/ENCFF441EMMENCFF239WHZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB855XBW michael-snyder:L-2013 "ENCFF239WHZ,ENCFF441EMM" HiSeq 4000 2016-09-16T03:29:59.076507+00:00 in progress unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyvVQ0369GZQjPPJb6P0k3 ENCSR177VFS https://www.encodeproject.org/experiments/ENCSR177VFS transcription factor MEF2B-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF542XCL https://www.encodeproject.org/files/ENCFF542XCL/@@download/ENCFF542XCL.bam ENCFF128KAH https://www.encodeproject.org/files/ENCFF128KAH/@@download/ENCFF128KAH.bam 106.6 M 0 88.7 M 0.831 PE 100 100 native 39.2 M 0.0 M 28.1 M 0.527 0.72 0.71 3.47 235 1.44 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf4c1d58-0335-4fa2-93c0-882813e35ab4/@@download/cross_correlation_plot/ENCFF277DLTENCFF245NVS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB417QRW michael-snyder:L-2014 "ENCFF245NVS,ENCFF277DLT" HiSeq 4000 2016-09-16T03:18:41.082044+00:00 in progress unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyvb80369G2Yz4yQjpqfP7 ENCSR552XSN https://www.encodeproject.org/experiments/ENCSR552XSN transcription factor MLLT1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF665BYT https://www.encodeproject.org/files/ENCFF665BYT/@@download/ENCFF665BYT.bam ENCFF204VIF https://www.encodeproject.org/files/ENCFF204VIF/@@download/ENCFF204VIF.bam 74.9 M 0 68.3 M 0.912 PE 100 100 native 30.2 M 0.0 M 27.6 M 0.736 0.92 0.92 11.72 210 1.17 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf554a68-6e24-441e-bfe7-10a195d89798/@@download/cross_correlation_plot/ENCFF021DVVENCFF804QYW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB448LQS michael-snyder:L-1956 "ENCFF804QYW,ENCFF021DVV" HiSeq 2000 2016-10-09T17:05:26.223487+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42kQ0jv1XYYX2Fxk3f4zZ ENCSR552XSN https://www.encodeproject.org/experiments/ENCSR552XSN transcription factor MLLT1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF982QKE https://www.encodeproject.org/files/ENCFF982QKE/@@download/ENCFF982QKE.bam ENCFF639QMC https://www.encodeproject.org/files/ENCFF639QMC/@@download/ENCFF639QMC.bam 67.5 M 0 61.8 M 0.915 PE 100 100 native 27.3 M 0.0 M 24.3 M 0.719 0.89 0.89 8.88 225 1.19 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ba23f0a-13c1-4f46-8100-57b3c4e30a9d/@@download/cross_correlation_plot/ENCFF203MXCENCFF454FRC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB783GOT michael-snyder:L-1957 "ENCFF454FRC,ENCFF203MXC" HiSeq 2000 2016-10-09T17:05:14.619388+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42q00jv1vY92b0GYjVFpk ENCSR293QAR https://www.encodeproject.org/experiments/ENCSR293QAR transcription factor MTA2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF178EBR https://www.encodeproject.org/files/ENCFF178EBR/@@download/ENCFF178EBR.bam ENCFF029UNK https://www.encodeproject.org/files/ENCFF029UNK/@@download/ENCFF029UNK.bam 216.9 M 0 195.7 M 0.902 PE 100 100 native 86.2 M 0.0 M 58.6 M 0.541 0.68 0.68 3.02 220 1.16 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/b107df20-4491-4a37-894a-30d3362b7b64/@@download/cross_correlation_plot/ENCFF079AYEENCFF649MUT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB130QBB michael-snyder:L-1958 "ENCFF079AYE,ENCFF649MUT" HiSeq 4000 2016-09-16T03:27:57.992344+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyYGQ0369JP9931xpgPYz6 ENCSR293QAR https://www.encodeproject.org/experiments/ENCSR293QAR transcription factor MTA2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF888AIA https://www.encodeproject.org/files/ENCFF888AIA/@@download/ENCFF888AIA.bam ENCFF652NWL https://www.encodeproject.org/files/ENCFF652NWL/@@download/ENCFF652NWL.bam 42.7 M 0 36.0 M 0.842 PE 100 100 native 15.7 M 0.0 M 13.2 M 0.619 0.84 0.84 6.29 220 1.35 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c913e23-28fc-4ac8-844e-c5a7e0bd632b/@@download/cross_correlation_plot/ENCFF271TDTENCFF973RUL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB796OOU michael-snyder:L-1959 "ENCFF271TDT,ENCFF973RUL" HiSeq 4000 2016-09-16T03:18:03.481990+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyYP80369GZQjPPJb6P0b8 ENCSR278SQL https://www.encodeproject.org/experiments/ENCSR278SQL transcription factor NBN-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF722EAP https://www.encodeproject.org/files/ENCFF722EAP/@@download/ENCFF722EAP.bam ENCFF727ATN https://www.encodeproject.org/files/ENCFF727ATN/@@download/ENCFF727ATN.bam 80.9 M 0 75.6 M 0.934 PE 100 100 native 32.9 M 0.0 M 31.4 M 0.775 0.96 0.96 22.57 200 1.09 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f632a06-b795-48ab-9b4e-cc23c686f975/@@download/cross_correlation_plot/ENCFF485UKVENCFF881QTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB654DNL michael-snyder:L-1960 "ENCFF485UKV,ENCFF881QTR" HiSeq 2000 2016-10-09T17:30:49.777589+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66z80jv1QZp37BGvK2BP2 ENCSR278SQL https://www.encodeproject.org/experiments/ENCSR278SQL transcription factor NBN-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF382USC https://www.encodeproject.org/files/ENCFF382USC/@@download/ENCFF382USC.bam ENCFF384CXB https://www.encodeproject.org/files/ENCFF384CXB/@@download/ENCFF384CXB.bam 65.1 M 0 59.5 M 0.914 PE 100 100 native 25.9 M 0.0 M 24.4 M 0.749 0.94 0.94 17.21 210 1.11 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4711c4b-582f-4d9a-bd2b-08828ebfe460/@@download/cross_correlation_plot/ENCFF724KPMENCFF863GNT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB355YET michael-snyder:L-1961 "ENCFF863GNT,ENCFF724KPM" HiSeq 2000 2016-10-09T17:30:25.244199+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67380jv1xFKXGVbpg0QG4 ENCSR000DZY https://www.encodeproject.org/experiments/ENCSR000DZY transcription factor NFE2-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF952AWV https://www.encodeproject.org/files/ENCFF952AWV/@@download/ENCFF952AWV.bam ENCFF851SSC https://www.encodeproject.org/files/ENCFF851SSC/@@download/ENCFF851SSC.bam 21.3 M 0 18.4 M 0.863 SE 36 28 28 0.0 M 12.8 M 12.6 M 0.592 0.99 0.99 147.49 115 1.04 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/75e14e6e-9d24-40cd-9ee4-81665568dd9a/@@download/cross_correlation_plot/ENCFF000VZL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUE ENCFF000VZL Illumina Genome Analyzer 2017-01-05T21:18:37.003683+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g817003697J9fxG4f90kgg ENCSR000DZY https://www.encodeproject.org/experiments/ENCSR000DZY transcription factor NFE2-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF254WNB https://www.encodeproject.org/files/ENCFF254WNB/@@download/ENCFF254WNB.bam ENCFF553YRB https://www.encodeproject.org/files/ENCFF553YRB/@@download/ENCFF553YRB.bam 24.7 M 0 17.9 M 0.723 SE 36 28 28 0.0 M 12.5 M 11.3 M 0.455 0.90 0.90 10.12 110 1.07 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/d163ae4c-a160-4b4d-be6b-e5cb4b2b3d5d/@@download/cross_correlation_plot/ENCFF000VZK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGV ENCFF000VZK Illumina Genome Analyzer 2017-01-05T21:18:35.839677+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g81Fj0369Pyf0JG49f337q ENCSR746XEG https://www.encodeproject.org/experiments/ENCSR746XEG transcription factor NFXL1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF622GDZ https://www.encodeproject.org/files/ENCFF622GDZ/@@download/ENCFF622GDZ.bam ENCFF906JCA https://www.encodeproject.org/files/ENCFF906JCA/@@download/ENCFF906JCA.bam 88.8 M 0 87.0 M 0.980 PE 100 100 native 38.4 M 0.0 M 33.4 M 0.752 0.87 0.87 7.45 155 1.06 5.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f8bcde4-f191-4dc9-9535-18fd042562ad/@@download/cross_correlation_plot/ENCFF377QZDENCFF639NST.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB303WOX michael-snyder:L-3428 "ENCFF639NST,ENCFF377QZD" HiSeq 4000 2017-05-05T11:29:18.452050+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yv9j03699xk39703jJkfP ENCSR746XEG https://www.encodeproject.org/experiments/ENCSR746XEG transcription factor NFXL1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF673BXM https://www.encodeproject.org/files/ENCFF673BXM/@@download/ENCFF673BXM.bam ENCFF283EIU https://www.encodeproject.org/files/ENCFF283EIU/@@download/ENCFF283EIU.bam 84.5 M 0 83.2 M 0.984 PE 100 100 native 36.6 M 0.0 M 30.9 M 0.731 0.84 0.84 6.20 170 1.07 7.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/477bbaee-c551-46f6-ad44-65423fa6a3e9/@@download/cross_correlation_plot/ENCFF571OVIENCFF370YRD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB085BBJ michael-snyder:L-3429 "ENCFF571OVI,ENCFF370YRD" HiSeq 4000 2017-05-05T10:45:53.258690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvJ803692Z7YP70b61zxX ENCSR732PJX https://www.encodeproject.org/experiments/ENCSR732PJX RNA binding protein NKRF-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF422FDA https://www.encodeproject.org/files/ENCFF422FDA/@@download/ENCFF422FDA.bam ENCFF122KEM https://www.encodeproject.org/files/ENCFF122KEM/@@download/ENCFF122KEM.bam 84.6 M 0 66.5 M 0.786 PE 100 100 native 29.6 M 0.0 M 25.9 M 0.613 0.88 0.87 7.87 170 1.10 3.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/101f26c9-ae5a-4385-915b-531e9013f10f/@@download/cross_correlation_plot/ENCFF877IEWENCFF188COD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB535PNP michael-snyder:L-3468 "ENCFF877IEW,ENCFF188COD" HiSeq 4000 2017-05-05T22:08:33.757069+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vy8036911Q6zKVv508zz ENCSR732PJX https://www.encodeproject.org/experiments/ENCSR732PJX RNA binding protein NKRF-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF244EFU https://www.encodeproject.org/files/ENCFF244EFU/@@download/ENCFF244EFU.bam ENCFF202RJK https://www.encodeproject.org/files/ENCFF202RJK/@@download/ENCFF202RJK.bam 90.5 M 0 74.0 M 0.818 PE 100 100 native 32.9 M 0.0 M 26.3 M 0.582 0.80 0.79 4.72 170 1.10 2.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c295e92-0671-4ec7-91da-50844460609c/@@download/cross_correlation_plot/ENCFF369GUTENCFF530QYJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB533DWH michael-snyder:L-3469 "ENCFF530QYJ,ENCFF369GUT" HiSeq 4000 2017-05-05T22:21:08.947102+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469x1j03699xk39703jJy78 ENCSR784VIQ https://www.encodeproject.org/experiments/ENCSR784VIQ transcription factor NR2C1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF785FLS https://www.encodeproject.org/files/ENCFF785FLS/@@download/ENCFF785FLS.bam ENCFF537UPI https://www.encodeproject.org/files/ENCFF537UPI/@@download/ENCFF537UPI.bam 99.1 M 0 96.5 M 0.973 PE 100 100 native 43.4 M 0.0 M 25.5 M 0.515 0.59 0.56 2.12 165 1.30 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/6547c463-d518-4646-aa42-afa6330f1021/@@download/cross_correlation_plot/ENCFF017QRMENCFF805JBH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB171USF michael-snyder:L-3452 "ENCFF805JBH,ENCFF017QRM" HiSeq 4000 2017-06-06T18:28:30.476834+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3PYQ036903BzqG23ZKYf6 ENCSR784VIQ https://www.encodeproject.org/experiments/ENCSR784VIQ transcription factor NR2C1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF236GOA https://www.encodeproject.org/files/ENCFF236GOA/@@download/ENCFF236GOA.bam ENCFF812WOT https://www.encodeproject.org/files/ENCFF812WOT/@@download/ENCFF812WOT.bam 99.9 M 0 95.6 M 0.957 PE 100 100 native 43.0 M 0.0 M 26.4 M 0.529 0.61 0.59 2.30 170 1.23 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/814b1138-21b1-4e41-817e-2069f06d6de2/@@download/cross_correlation_plot/ENCFF194BDTENCFF209IJT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB353KNE michael-snyder:L-3453 "ENCFF194BDT,ENCFF209IJT" HiSeq 4000 2017-06-06T18:24:17.076752+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Pf803691fF9gG2bvby7f ENCSR514VYD https://www.encodeproject.org/experiments/ENCSR514VYD transcription factor NR2F1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF320FKI https://www.encodeproject.org/files/ENCFF320FKI/@@download/ENCFF320FKI.bam ENCFF145YKB https://www.encodeproject.org/files/ENCFF145YKB/@@download/ENCFF145YKB.bam 98.3 M 0 79.3 M 0.807 PE 100 100 native 35.3 M 0.0 M 28.3 M 0.575 0.80 0.80 4.85 185 1.20 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e48714c-8467-49dd-8e7a-5902e9a2573e/@@download/cross_correlation_plot/ENCFF340SQPENCFF587OVW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB684CZX michael-snyder:L-3362 "ENCFF340SQP,ENCFF587OVW" HiSeq 4000 2017-04-09T00:00:47.923684+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05x8036975Q0F07J1K9z2 ENCSR514VYD https://www.encodeproject.org/experiments/ENCSR514VYD transcription factor NR2F1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF282GMA https://www.encodeproject.org/files/ENCFF282GMA/@@download/ENCFF282GMA.bam ENCFF790VVG https://www.encodeproject.org/files/ENCFF790VVG/@@download/ENCFF790VVG.bam 63.8 M 0 56.5 M 0.886 PE 100 100 native 24.7 M 0.0 M 21.3 M 0.667 0.86 0.86 7.06 185 1.24 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/43d41354-db9f-4235-a7ad-b5fcc7e73e9b/@@download/cross_correlation_plot/ENCFF264WMAENCFF155GMC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB066TOE michael-snyder:L-3363 "ENCFF264WMA,ENCFF155GMC" HiSeq 4000 2017-04-08T23:58:55.464825+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z061Q0369GKX6y4xkVB5vp ENCSR904YPP https://www.encodeproject.org/experiments/ENCSR904YPP transcription factor NR3C1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF639ZSW https://www.encodeproject.org/files/ENCFF639ZSW/@@download/ENCFF639ZSW.bam ENCFF374DCG https://www.encodeproject.org/files/ENCFF374DCG/@@download/ENCFF374DCG.bam 32.5 M 0 32.1 M 0.989 SE 36 36 native 0.0 M 25.7 M 22.8 M 0.701 0.89 0.88 8.50 150 1.04 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/11206a75-d87a-4218-a615-50a5456bdf59/@@download/cross_correlation_plot/ENCFF002EBY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB377EUF michael-snyder:GRp20_sc-1002_GM12878_Rep1 ENCFF002EBY Illumina Genome Analyzer IIx 2016-10-29T18:01:12.208052+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B24GQ0jv1Y4294qbK859k6 ENCSR904YPP https://www.encodeproject.org/experiments/ENCSR904YPP transcription factor NR3C1-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF357PHJ https://www.encodeproject.org/files/ENCFF357PHJ/@@download/ENCFF357PHJ.bam ENCFF295WTT https://www.encodeproject.org/files/ENCFF295WTT/@@download/ENCFF295WTT.bam 26.8 M 0 25.7 M 0.959 SE 36 36 native 0.0 M 19.5 M 18.0 M 0.671 0.93 0.93 13.97 110 1.04 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/14de7944-e117-4966-908b-e9e13bc9dd1a/@@download/cross_correlation_plot/ENCFF002EBU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB382DZC michael-snyder:GRp20_sc-1002_Rb_GM12878_Rep3 ENCFF002EBU Illumina Genome Analyzer IIx 2016-10-29T18:00:33.444104+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B24P00jv1xKJFVg9KK46b4 ENCSR192AFN https://www.encodeproject.org/experiments/ENCSR192AFN transcription factor PAX8-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF094RVF https://www.encodeproject.org/files/ENCFF094RVF/@@download/ENCFF094RVF.bam ENCFF456UYW https://www.encodeproject.org/files/ENCFF456UYW/@@download/ENCFF456UYW.bam 125.3 M 0 116.4 M 0.929 PE 100 100 native 51.5 M 0.0 M 28.5 M 0.454 0.55 0.56 2.28 225 1.06 4.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/12c74eef-4c3e-45a0-9f65-336c40296a4d/@@download/cross_correlation_plot/ENCFF239SIOENCFF871KIO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB736IZE michael-snyder:L-1971 "ENCFF871KIO,ENCFF239SIO" HiSeq 4000 2016-09-16T03:21:38.513363+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyfb00369Fv9Fbyj2z3Q1V ENCSR192AFN https://www.encodeproject.org/experiments/ENCSR192AFN transcription factor PAX8-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF946NSO https://www.encodeproject.org/files/ENCFF946NSO/@@download/ENCFF946NSO.bam ENCFF966TTY https://www.encodeproject.org/files/ENCFF966TTY/@@download/ENCFF966TTY.bam 131.7 M 0 120.1 M 0.911 PE 100 100 native 53.0 M 0.0 M 34.8 M 0.529 0.66 0.66 2.93 220 1.05 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/01c9516d-475b-40ee-834c-8072c2a5c552/@@download/cross_correlation_plot/ENCFF545WZDENCFF928EJZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB092USW michael-snyder:L-1976 "ENCFF928EJZ,ENCFF545WZD" HiSeq 4000 2016-09-16T03:22:14.538103+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyfj003696x9VJV48y49y4 ENCSR000EAC https://www.encodeproject.org/experiments/ENCSR000EAC transcription factor RAD21-human GM12878 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR482TWQ https://www.encodeproject.org/experiments/ENCSR482TWQ transcription factor RAD51-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF855SJQ https://www.encodeproject.org/files/ENCFF855SJQ/@@download/ENCFF855SJQ.bam ENCFF295PNK https://www.encodeproject.org/files/ENCFF295PNK/@@download/ENCFF295PNK.bam 94.0 M 0 84.8 M 0.902 PE 100 100 native 38.2 M 0.0 M 20.4 M 0.435 0.54 0.55 2.24 220 1.19 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/fafde037-120c-4b7d-b5de-9d3c99aace92/@@download/cross_correlation_plot/ENCFF758PBWENCFF393JDU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB500DUK michael-snyder:L-1972 "ENCFF758PBW,ENCFF393JDU" HiSeq 4000 2016-10-27T22:21:29.516553+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bkQQ03697KPkyX9BPQF41 ENCSR482TWQ https://www.encodeproject.org/experiments/ENCSR482TWQ transcription factor RAD51-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF550TMJ https://www.encodeproject.org/files/ENCFF550TMJ/@@download/ENCFF550TMJ.bam ENCFF685SRU https://www.encodeproject.org/files/ENCFF685SRU/@@download/ENCFF685SRU.bam 163.4 M 0 152.3 M 0.932 PE 100 100 native 68.6 M 0.0 M 41.6 M 0.509 0.61 0.60 2.41 220 1.18 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fe2cb2d-0c06-41ac-a23b-59359e32196f/@@download/cross_correlation_plot/ENCFF219PKKENCFF522PJZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB269SHK michael-snyder:L-1977 "ENCFF522PJZ,ENCFF219PKK" HiSeq 4000 2016-10-27T22:26:19.531026+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bkZ00369GJ6xQfbB7F5y2 ENCSR785OKZ https://www.encodeproject.org/experiments/ENCSR785OKZ transcription factor RB1-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF948HZE https://www.encodeproject.org/files/ENCFF948HZE/@@download/ENCFF948HZE.bam ENCFF783MVK https://www.encodeproject.org/files/ENCFF783MVK/@@download/ENCFF783MVK.bam 69.3 M 0 65.7 M 0.949 PE 100 100 native 29.7 M 0.0 M 26.1 M 0.754 0.88 0.88 8.11 220 1.08 11.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fc94e24-0ce8-4f50-b15d-886490e0515b/@@download/cross_correlation_plot/ENCFF002ELCENCFF002EKY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB524SVT michael-snyder:795_A_TruSeq_TGACCA "ENCFF002ELC,ENCFF002EKY" HiSeq 2000 2017-03-03T17:55:55.638795+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKjx8036937jVXBbKyY3qP ENCSR785OKZ https://www.encodeproject.org/experiments/ENCSR785OKZ transcription factor RB1-human GM12878 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF888KPM https://www.encodeproject.org/files/ENCFF888KPM/@@download/ENCFF888KPM.bam ENCFF264CPI https://www.encodeproject.org/files/ENCFF264CPI/@@download/ENCFF264CPI.bam 97.2 M 0 95.5 M 0.982 PE 101 101 native 43.6 M 0.0 M 36.7 M 0.755 0.84 0.84 6.09 180 1.09 3.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/66f47929-f88b-4553-b29f-8155d0550e16/@@download/cross_correlation_plot/ENCFF212KHQENCFF441MWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB369DMO "ENCFF212KHQ,ENCFF441MWI" HiSeq 2000 2017-03-03T17:59:25.511821+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKk2Q0369G4KF414JkBvYZ ENCSR000EAG https://www.encodeproject.org/experiments/ENCSR000EAG transcription factor RELA-human GM12878 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000DZW https://www.encodeproject.org/experiments/ENCSR000DZW transcription factor RFX5-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF707BSC https://www.encodeproject.org/files/ENCFF707BSC/@@download/ENCFF707BSC.bam ENCFF887QJG https://www.encodeproject.org/files/ENCFF887QJG/@@download/ENCFF887QJG.bam 33.6 M 0 30.4 M 0.907 SE 36 28 28 0.0 M 21.1 M 20.1 M 0.599 0.95 0.96 23.04 110 1.07 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/709c86df-693e-4f24-a384-9d69bd51fea3/@@download/cross_correlation_plot/ENCFF000WDO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVU ENCFF000WDO Illumina Genome Analyzer 2017-01-05T21:31:41.784571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7VvQ0369Pyf0JG49f330v ENCSR000DZW https://www.encodeproject.org/experiments/ENCSR000DZW transcription factor RFX5-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF086GHN https://www.encodeproject.org/files/ENCFF086GHN/@@download/ENCFF086GHN.bam ENCFF150IXN https://www.encodeproject.org/files/ENCFF150IXN/@@download/ENCFF150IXN.bam 24.2 M 0 23.1 M 0.952 SE 36 28 28 0.0 M 16.3 M 15.8 M 0.653 0.97 0.98 52.15 125 1.13 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee75e0e7-1b14-48b1-9e09-3f606cfd6f8c/@@download/cross_correlation_plot/ENCFF000WDK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABR ENCFF000WDK Illumina Genome Analyzer 2017-01-05T21:31:37.195902+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7X180369Kbx0VG4x73zxj ENCSR679FAB https://www.encodeproject.org/experiments/ENCSR679FAB "transcription factor,chromatin remodeller" RNF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF215UZA https://www.encodeproject.org/files/ENCFF215UZA/@@download/ENCFF215UZA.bam ENCFF774DBC https://www.encodeproject.org/files/ENCFF774DBC/@@download/ENCFF774DBC.bam 76.1 M 0 74.9 M 0.984 PE 100 100 native 33.9 M 0.0 M 30.0 M 0.789 0.89 0.88 8.54 195 1.07 6.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ad2c694-45dd-4fe4-8057-ea8e5e413358/@@download/cross_correlation_plot/ENCFF002ELDENCFF002ELF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB561LUR michael-snyder:795_B_TruSeq_ATCACG "ENCFF002ELF,ENCFF002ELD" HiSeq 2000 2016-10-29T18:04:56.371836+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B2B0j0jv1pgF5f15PFG1x1 ENCSR679FAB https://www.encodeproject.org/experiments/ENCSR679FAB "transcription factor,chromatin remodeller" RNF2-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF503CEM https://www.encodeproject.org/files/ENCFF503CEM/@@download/ENCFF503CEM.bam ENCFF946VVI https://www.encodeproject.org/files/ENCFF946VVI/@@download/ENCFF946VVI.bam 65.2 M 0 64.3 M 0.986 PE 100 100 native 29.2 M 0.0 M 20.2 M 0.619 0.70 0.68 3.03 205 1.11 6.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/59964ced-19ae-4536-a4af-b372242135e3/@@download/cross_correlation_plot/ENCFF002EKXENCFF002EKV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB183IUI michael-snyder:795_B_TruSeq_CGATGT "ENCFF002EKV,ENCFF002EKX" HiSeq 2000 2016-10-29T17:59:50.620335+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B2B3Q0jv1pj2bF0JP9K2gP ENCSR000DYX https://www.encodeproject.org/experiments/ENCSR000DYX transcription factor SIN3A-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF952XKW https://www.encodeproject.org/files/ENCFF952XKW/@@download/ENCFF952XKW.bam ENCFF260YKP https://www.encodeproject.org/files/ENCFF260YKP/@@download/ENCFF260YKP.bam 23.6 M 0 23.3 M 0.989 SE 36 28 28 0.0 M 16.9 M 16.2 M 0.688 0.96 0.96 27.26 120 1.05 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/654164c0-9c85-4b31-9707-a78d6b9cb0c2/@@download/cross_correlation_plot/ENCFF000WDC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOB ENCFF000WDC Illumina Genome Analyzer 2017-01-05T21:31:04.538341+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Z200369PjBfKG4QzQvzj ENCSR000DYX https://www.encodeproject.org/experiments/ENCSR000DYX transcription factor SIN3A-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF884HCB https://www.encodeproject.org/files/ENCFF884HCB/@@download/ENCFF884HCB.bam ENCFF760XFV https://www.encodeproject.org/files/ENCFF760XFV/@@download/ENCFF760XFV.bam 29.9 M 0 29.1 M 0.975 SE 36 28 28 0.0 M 21.0 M 19.9 M 0.668 0.95 0.95 20.72 110 1.08 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffa759c1-cd6e-4c04-81b3-d63c90b6f92b/@@download/cross_correlation_plot/ENCFF000WDE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AER ENCFF000WDE Illumina Genome Analyzer 2017-01-05T21:31:17.695458+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Z480369J2YG2G5JGYVZj ENCSR464QDT https://www.encodeproject.org/experiments/ENCSR464QDT transcription factor SKI-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF837IIV https://www.encodeproject.org/files/ENCFF837IIV/@@download/ENCFF837IIV.bam ENCFF997OCT https://www.encodeproject.org/files/ENCFF997OCT/@@download/ENCFF997OCT.bam 26.5 M 0 24.2 M 0.911 PE 100 100 native 10.6 M 0.0 M 8.2 M 0.620 0.78 0.78 4.65 220 1.34 2.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/08a0e379-9803-4c87-a735-cde16a01c3db/@@download/cross_correlation_plot/ENCFF688WRCENCFF061JRJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB210LSG michael-snyder:L-1974 "ENCFF061JRJ,ENCFF688WRC" HiSeq 4000 2016-09-16T03:15:47.714983+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyqfj0369F7KPkXGKbg6Y8 ENCSR464QDT https://www.encodeproject.org/experiments/ENCSR464QDT transcription factor SKI-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF353IJH https://www.encodeproject.org/files/ENCFF353IJH/@@download/ENCFF353IJH.bam ENCFF576UJJ https://www.encodeproject.org/files/ENCFF576UJJ/@@download/ENCFF576UJJ.bam 169.3 M 0 154.1 M 0.910 PE 100 100 native 67.3 M 0.0 M 48.0 M 0.566 0.71 0.71 3.42 230 1.05 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/751a92b5-93cf-49ba-a47b-5ce058c3330d/@@download/cross_correlation_plot/ENCFF038JJGENCFF398JTY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB934HMH michael-snyder:L-1979 "ENCFF398JTY,ENCFF038JJG" HiSeq 4000 2016-09-16T03:25:16.134108+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyqkj036994Jx4PVBXKXzp ENCSR212YKD https://www.encodeproject.org/experiments/ENCSR212YKD transcription factor SKIL-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF807RLO https://www.encodeproject.org/files/ENCFF807RLO/@@download/ENCFF807RLO.bam ENCFF587ZOR https://www.encodeproject.org/files/ENCFF587ZOR/@@download/ENCFF587ZOR.bam 106.5 M 0 97.6 M 0.917 PE 100 100 native 42.9 M 0.0 M 19.3 M 0.363 0.45 0.46 1.88 230 1.15 2.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b6d16e9-ca5a-41f0-a4b9-7026b037c4ed/@@download/cross_correlation_plot/ENCFF066RUQENCFF964VCI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB319THK michael-snyder:L-1973 "ENCFF066RUQ,ENCFF964VCI" HiSeq 4000 2016-09-01T21:31:10.975730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VzGQ03690qpJxvQPPjp3j ENCSR212YKD https://www.encodeproject.org/experiments/ENCSR212YKD transcription factor SKIL-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF065CIX https://www.encodeproject.org/files/ENCFF065CIX/@@download/ENCFF065CIX.bam ENCFF250HJQ https://www.encodeproject.org/files/ENCFF250HJQ/@@download/ENCFF250HJQ.bam 165.0 M 0 151.5 M 0.918 PE 100 100 native 66.5 M 0.0 M 31.4 M 0.380 0.48 0.47 1.84 210 1.09 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d084866-2086-4545-8393-659a623d550a/@@download/cross_correlation_plot/ENCFF156SNYENCFF487QUS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB934BCL michael-snyder:L-1978 "ENCFF156SNY,ENCFF487QUS" HiSeq 4000 2016-09-01T21:34:56.511023+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VzKj0369268Zz3vPkfG5Q ENCSR813DCK https://www.encodeproject.org/experiments/ENCSR813DCK transcription factor SMAD1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF361MVV https://www.encodeproject.org/files/ENCFF361MVV/@@download/ENCFF361MVV.bam ENCFF440WOD https://www.encodeproject.org/files/ENCFF440WOD/@@download/ENCFF440WOD.bam 53.0 M 0 51.8 M 0.978 PE 100 100 native 22.6 M 0.0 M 19.5 M 0.735 0.86 0.86 6.91 205 1.09 3.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d87aff7-7f50-4266-9d46-dcd69cc69d58/@@download/cross_correlation_plot/ENCFF060AFDENCFF099MWU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB107ZYE michael-snyder:L-1698 "ENCFF060AFD,ENCFF099MWU" HiSeq 2000 2017-05-05T08:50:40.586950+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yx9Q03698bZvg2JGkJ6V4 ENCSR813DCK https://www.encodeproject.org/experiments/ENCSR813DCK transcription factor SMAD1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF089SHL https://www.encodeproject.org/files/ENCFF089SHL/@@download/ENCFF089SHL.bam ENCFF552FJH https://www.encodeproject.org/files/ENCFF552FJH/@@download/ENCFF552FJH.bam 63.0 M 0 62.0 M 0.984 PE 100 100 native 27.6 M 0.0 M 23.9 M 0.760 0.87 0.87 7.29 205 1.08 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/6be348ae-f864-46f9-b13c-76ad9ced9663/@@download/cross_correlation_plot/ENCFF659XQWENCFF276DXN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB777ZWH michael-snyder:L-1702 "ENCFF276DXN,ENCFF659XQW" HiSeq 2000 2017-05-05T09:47:13.449877+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yxJQ0369KY6Jp7Gj1pfQY ENCSR706YUH https://www.encodeproject.org/experiments/ENCSR706YUH transcription factor SMARCA5-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF506OTR https://www.encodeproject.org/files/ENCFF506OTR/@@download/ENCFF506OTR.bam ENCFF276HHB https://www.encodeproject.org/files/ENCFF276HHB/@@download/ENCFF276HHB.bam 80.9 M 0 78.3 M 0.968 PE 100 100 native 34.9 M 0.0 M 32.2 M 0.797 0.92 0.92 12.72 150 1.11 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/8114b9a7-c734-4e59-8cd1-a330122d3f43/@@download/cross_correlation_plot/ENCFF659OJSENCFF017DPB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB813QNG michael-snyder:L-3492 "ENCFF659OJS,ENCFF017DPB" HiSeq 4000 2017-06-06T18:18:08.393401+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Vvj0369Pgf4XGbPvkX3x ENCSR706YUH https://www.encodeproject.org/experiments/ENCSR706YUH transcription factor SMARCA5-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF339LDW https://www.encodeproject.org/files/ENCFF339LDW/@@download/ENCFF339LDW.bam ENCFF568JKN https://www.encodeproject.org/files/ENCFF568JKN/@@download/ENCFF568JKN.bam 97.6 M 0 93.7 M 0.961 PE 100 100 native 41.7 M 0.0 M 36.7 M 0.753 0.88 0.88 8.34 160 1.07 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bd680f3-12c3-41b4-ac63-b97ed862ee22/@@download/cross_correlation_plot/ENCFF416SAWENCFF058YFW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB262OBN michael-snyder:L-3493 "ENCFF058YFW,ENCFF416SAW" HiSeq 4000 2017-06-06T18:18:51.298611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Vyj0369Pgf4XGbPvkX46 ENCSR000DYU https://www.encodeproject.org/experiments/ENCSR000DYU transcription factor SREBF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF269VOK https://www.encodeproject.org/files/ENCFF269VOK/@@download/ENCFF269VOK.bam ENCFF941NIT https://www.encodeproject.org/files/ENCFF941NIT/@@download/ENCFF941NIT.bam 30.7 M 0 30.3 M 0.986 SE 36 36 native 0.0 M 23.9 M 20.2 M 0.657 0.85 0.84 6.14 150 1.04 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/d497f864-3875-488b-bed8-897b068de47d/@@download/cross_correlation_plot/ENCFF000WDW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANY ENCFF000WDW Illumina Genome Analyzer 2016-12-11T07:46:54.336354+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Vjj0369KbxV61z4GFx13 ENCSR000DYU https://www.encodeproject.org/experiments/ENCSR000DYU transcription factor SREBF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF177QCA https://www.encodeproject.org/files/ENCFF177QCA/@@download/ENCFF177QCA.bam ENCFF650PKJ https://www.encodeproject.org/files/ENCFF650PKJ/@@download/ENCFF650PKJ.bam 33.6 M 0 32.9 M 0.978 SE 36 36 native 0.0 M 25.7 M 21.9 M 0.652 0.86 0.85 6.68 130 1.03 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/79e3aa91-856c-45d2-bf4d-7a433497f7bf/@@download/cross_correlation_plot/ENCFF000WDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANZ ENCFF000WDY Illumina Genome Analyzer 2016-12-11T09:29:51.017632+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Vy803697k5jKB6pJ7v3V ENCSR000DYT https://www.encodeproject.org/experiments/ENCSR000DYT transcription factor SREBF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF154GZC https://www.encodeproject.org/files/ENCFF154GZC/@@download/ENCFF154GZC.bam ENCFF764ZSP https://www.encodeproject.org/files/ENCFF764ZSP/@@download/ENCFF764ZSP.bam 31.0 M 0 30.6 M 0.987 SE 36 36 native 0.0 M 24.0 M 20.9 M 0.674 0.87 0.87 7.65 165 1.05 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/66db6bfd-3034-42b6-955c-bfa8ffb0dbb0/@@download/cross_correlation_plot/ENCFF000WEF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJO ENCFF000WEF Illumina Genome Analyzer 2016-12-11T07:46:43.269002+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166QGj03692yykb1zBpz869 ENCSR000DYT https://www.encodeproject.org/experiments/ENCSR000DYT transcription factor SREBF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF637TAF https://www.encodeproject.org/files/ENCFF637TAF/@@download/ENCFF637TAF.bam ENCFF593LWQ https://www.encodeproject.org/files/ENCFF593LWQ/@@download/ENCFF593LWQ.bam 32.7 M 0 31.6 M 0.967 SE 36 36 native 0.0 M 24.7 M 21.5 M 0.660 0.88 0.87 7.79 150 1.05 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/f18f7699-1cce-43e5-b9ca-28826c832e53/@@download/cross_correlation_plot/ENCFF000WEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJP ENCFF000WEH Illumina Genome Analyzer 2016-12-11T08:33:34.851791+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166QX003692yykb1zBpz86Y ENCSR041XML https://www.encodeproject.org/experiments/ENCSR041XML transcription factor SRF-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF018ITN https://www.encodeproject.org/files/ENCFF018ITN/@@download/ENCFF018ITN.bam ENCFF951GLQ https://www.encodeproject.org/files/ENCFF951GLQ/@@download/ENCFF951GLQ.bam 131.9 M 0 90.6 M 0.687 PE 100 100 native 39.8 M 0.0 M 27.1 M 0.411 0.68 0.68 3.05 185 1.21 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/49554077-3703-406c-bcb0-559ce9a66144/@@download/cross_correlation_plot/ENCFF423CLLENCFF920YLL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB278BBE michael-snyder:L-2145 "ENCFF423CLL,ENCFF920YLL" HiSeq 4000 2016-09-16T03:22:26.272559+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyy980369Fb155KvKP91K9 ENCSR041XML https://www.encodeproject.org/experiments/ENCSR041XML transcription factor SRF-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF560TMS https://www.encodeproject.org/files/ENCFF560TMS/@@download/ENCFF560TMS.bam ENCFF207TPA https://www.encodeproject.org/files/ENCFF207TPA/@@download/ENCFF207TPA.bam 175.1 M 0 162.0 M 0.925 PE 100 100 native 71.7 M 0.0 M 41.4 M 0.473 0.58 0.57 2.27 200 1.24 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/07d05a5b-3235-4848-ac48-504274b785d9/@@download/cross_correlation_plot/ENCFF096BNXENCFF746BEA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB094VWJ michael-snyder:L-2146 "ENCFF096BNX,ENCFF746BEA" HiSeq 4000 2016-09-16T03:23:14.844201+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyyG80369BP06Yb0qGVZPb ENCSR000DZM https://www.encodeproject.org/experiments/ENCSR000DZM transcription factor STAT1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF111ILW https://www.encodeproject.org/files/ENCFF111ILW/@@download/ENCFF111ILW.bam ENCFF126REB https://www.encodeproject.org/files/ENCFF126REB/@@download/ENCFF126REB.bam 27.3 M 0 25.6 M 0.937 SE 36 28 28 0.0 M 18.1 M 17.6 M 0.646 0.97 0.97 36.83 90 1.03 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d57fd84-e841-482d-976a-2a34e8280dd6/@@download/cross_correlation_plot/ENCFF000WFE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMP ENCFF000WFE Illumina Genome Analyzer 2017-01-05T21:15:13.457192+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g81Vj0369P4Vg0G4JKxZfB ENCSR000DZM https://www.encodeproject.org/experiments/ENCSR000DZM transcription factor STAT1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF885KSI https://www.encodeproject.org/files/ENCFF885KSI/@@download/ENCFF885KSI.bam ENCFF479OSP https://www.encodeproject.org/files/ENCFF479OSP/@@download/ENCFF479OSP.bam 25.5 M 0 23.6 M 0.925 SE 36 28 28 0.0 M 16.1 M 15.6 M 0.610 0.97 0.97 38.99 115 1.04 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/ace03317-d169-4354-83e9-21a2961b500b/@@download/cross_correlation_plot/ENCFF000WFD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJK ENCFF000WFD Illumina Genome Analyzer 2017-01-05T21:15:25.188553+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g81fj0369PjBfKG4QzQx4j ENCSR332EYT https://www.encodeproject.org/experiments/ENCSR332EYT transcription factor STAT1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF735CSF https://www.encodeproject.org/files/ENCFF735CSF/@@download/ENCFF735CSF.bam ENCFF432SGY https://www.encodeproject.org/files/ENCFF432SGY/@@download/ENCFF432SGY.bam 59.6 M 0 58.6 M 0.983 PE 100 100 native 26.4 M 0.0 M 24.9 M 0.834 0.94 0.94 17.51 220 1.08 8.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e3a61a2-691e-4fd0-802a-a0bc4a5a4f7e/@@download/cross_correlation_plot/ENCFF002ELAENCFF002EKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB726PMJ michael-snyder:819_A_truseq_CAGATC "ENCFF002ELA,ENCFF002EKZ" HiSeq 2000 2016-10-29T18:06:31.538472+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B23zj0jv1b140QP5B2xKgJ ENCSR332EYT https://www.encodeproject.org/experiments/ENCSR332EYT transcription factor STAT1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF494QGK https://www.encodeproject.org/files/ENCFF494QGK/@@download/ENCFF494QGK.bam ENCFF166UJI https://www.encodeproject.org/files/ENCFF166UJI/@@download/ENCFF166UJI.bam 59.7 M 0 58.5 M 0.980 PE 100 100 native 26.5 M 0.0 M 22.8 M 0.765 0.86 0.86 6.93 225 1.09 7.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5eb70d4-d13a-4915-89ce-2ad45521b84f/@@download/cross_correlation_plot/ENCFF002ELBENCFF002ELE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB608UML michael-snyder:819_A_truseq_GATCAG "ENCFF002ELB,ENCFF002ELE" HiSeq 2000 2016-10-29T18:05:52.806687+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B242Q0jv1vJ6xQfbB7FXb3 ENCSR412QBS https://www.encodeproject.org/experiments/ENCSR412QBS "RNA binding protein,transcription factor" TARDBP-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF902XGC https://www.encodeproject.org/files/ENCFF902XGC/@@download/ENCFF902XGC.bam ENCFF959CLS https://www.encodeproject.org/files/ENCFF959CLS/@@download/ENCFF959CLS.bam 59.3 M 0 56.8 M 0.957 PE 100 100 native 25.3 M 0.0 M 24.1 M 0.814 0.96 0.96 22.49 210 1.10 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/4684f709-c60e-468a-8d51-69d6236d55c2/@@download/cross_correlation_plot/ENCFF481LLTENCFF887YKT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB993ETM michael-snyder:L-1996 "ENCFF887YKT,ENCFF481LLT" HiSeq 2000 2016-10-09T17:04:22.030705+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49580jv1QxJBfj5Zb2ppj ENCSR412QBS https://www.encodeproject.org/experiments/ENCSR412QBS "RNA binding protein,transcription factor" TARDBP-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF141RIS https://www.encodeproject.org/files/ENCFF141RIS/@@download/ENCFF141RIS.bam ENCFF376FCT https://www.encodeproject.org/files/ENCFF376FCT/@@download/ENCFF376FCT.bam 66.3 M 0 64.2 M 0.969 PE 100 100 native 28.5 M 0.0 M 27.4 M 0.827 0.96 0.96 25.15 195 1.09 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/18a27374-884b-4e56-a075-284ef3c7f3da/@@download/cross_correlation_plot/ENCFF176ERKENCFF178JHO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB603ZYH michael-snyder:L-1997 "ENCFF178JHO,ENCFF176ERK" HiSeq 2000 2016-10-09T17:04:49.621447+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv496j0jv1vY92b0GYjVG02 ENCSR000DZZ https://www.encodeproject.org/experiments/ENCSR000DZZ transcription factor TBP-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF987AWV https://www.encodeproject.org/files/ENCFF987AWV/@@download/ENCFF987AWV.bam ENCFF620DDS https://www.encodeproject.org/files/ENCFF620DDS/@@download/ENCFF620DDS.bam 28.1 M 0 23.8 M 0.845 SE 36 28 28 0.0 M 16.4 M 15.3 M 0.545 0.94 0.96 29.85 145 1.30 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ce7ec75-6a58-4b81-ac15-2cde3caf4dc1/@@download/cross_correlation_plot/ENCFF000WFQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEW ENCFF000WFQ Illumina Genome Analyzer 2017-01-05T21:29:07.988100+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7f7Q0369PjBfKG4QzQx0y ENCSR000DZZ https://www.encodeproject.org/experiments/ENCSR000DZZ transcription factor TBP-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF910NHM https://www.encodeproject.org/files/ENCFF910NHM/@@download/ENCFF910NHM.bam ENCFF336RFB https://www.encodeproject.org/files/ENCFF336RFB/@@download/ENCFF336RFB.bam 31.2 M 0 23.2 M 0.744 SE 36 28 28 0.0 M 16.2 M 15.1 M 0.484 0.94 0.95 22.13 140 1.18 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/3344b73d-f858-4ce1-801a-e575cdfde3f1/@@download/cross_correlation_plot/ENCFF000WFP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEV ENCFF000WFP Illumina Genome Analyzer 2017-01-05T21:29:21.756161+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7fB80369J2YG2G5JGYVf0 ENCSR739IHN https://www.encodeproject.org/experiments/ENCSR739IHN transcription factor TBX21-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF548STS https://www.encodeproject.org/files/ENCFF548STS/@@download/ENCFF548STS.bam ENCFF300OJT https://www.encodeproject.org/files/ENCFF300OJT/@@download/ENCFF300OJT.bam 34.8 M 0 33.2 M 0.952 PE 100 100 native 14.9 M 0.0 M 11.7 M 0.670 0.78 0.78 4.45 220 1.26 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/d76dd12e-c6e7-4d23-bdb8-a79c78965b02/@@download/cross_correlation_plot/ENCFF849OLWENCFF315WXD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB890RUD michael-snyder:L-1794 "ENCFF849OLW,ENCFF315WXD" HiSeq 2000 2016-10-09T17:01:29.785470+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43xj0jv1XYYX2Fxk3f51Z ENCSR739IHN https://www.encodeproject.org/experiments/ENCSR739IHN transcription factor TBX21-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF360EFO https://www.encodeproject.org/files/ENCFF360EFO/@@download/ENCFF360EFO.bam ENCFF822WHM https://www.encodeproject.org/files/ENCFF822WHM/@@download/ENCFF822WHM.bam 48.2 M 0 46.6 M 0.967 PE 100 100 native 21.2 M 0.0 M 18.0 M 0.748 0.85 0.85 6.42 215 1.48 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec214f24-35bf-4086-a133-13e19f978bd0/@@download/cross_correlation_plot/ENCFF551RMTENCFF881YFO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB106PKX michael-snyder:L-1795 "ENCFF881YFO,ENCFF551RMT" HiSeq 2000 2016-10-09T17:04:44.759371+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43z80jv1xPyfX78Yz4j04 ENCSR725VFL https://www.encodeproject.org/experiments/ENCSR725VFL transcription factor TCF12-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF112UBX https://www.encodeproject.org/files/ENCFF112UBX/@@download/ENCFF112UBX.bam ENCFF744FOT https://www.encodeproject.org/files/ENCFF744FOT/@@download/ENCFF744FOT.bam 81.3 M 0 79.4 M 0.977 PE 100 100 native 36.1 M 0.0 M 20.5 M 0.505 0.57 0.54 1.96 170 1.13 3.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/b61126f6-1adf-4eef-8fc8-0800f60c3c22/@@download/cross_correlation_plot/ENCFF238XIHENCFF183QAJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB984OVA michael-snyder:L-3450 "ENCFF238XIH,ENCFF183QAJ" HiSeq 4000 2017-06-06T18:22:37.085505+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Q2j036990P6v90pyg340 ENCSR725VFL https://www.encodeproject.org/experiments/ENCSR725VFL transcription factor TCF12-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF116EPL https://www.encodeproject.org/files/ENCFF116EPL/@@download/ENCFF116EPL.bam ENCFF239NLE https://www.encodeproject.org/files/ENCFF239NLE/@@download/ENCFF239NLE.bam 103.7 M 0 98.1 M 0.946 PE 100 100 native 44.0 M 0.0 M 27.8 M 0.536 0.63 0.61 2.45 170 1.09 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/0623ba71-0217-44d3-9de6-f009c47a8d71/@@download/cross_correlation_plot/ENCFF530OLZENCFF431UPR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB797QGH michael-snyder:L-3451 "ENCFF530OLZ,ENCFF431UPR" HiSeq 4000 2017-06-06T18:24:08.562123+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Q4j0369Pgf4XGbPvkX1V ENCSR835XKS https://www.encodeproject.org/experiments/ENCSR835XKS transcription factor TRIM22-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF366RSX https://www.encodeproject.org/files/ENCFF366RSX/@@download/ENCFF366RSX.bam ENCFF861ZPY https://www.encodeproject.org/files/ENCFF861ZPY/@@download/ENCFF861ZPY.bam 42.0 M 0 40.2 M 0.957 PE 100 100 native 18.0 M 0.0 M 16.6 M 0.789 0.92 0.92 12.60 220 1.14 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3f9a103-c5eb-45e8-bb6f-017113ce1390/@@download/cross_correlation_plot/ENCFF050IAWENCFF243YFW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB589XPX michael-snyder:L-1994 "ENCFF243YFW,ENCFF050IAW" HiSeq 2000 2016-10-08T07:50:06.510590+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbK1j0jv1ZZ7QvzQX049k7 ENCSR835XKS https://www.encodeproject.org/experiments/ENCSR835XKS transcription factor TRIM22-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF465CEB https://www.encodeproject.org/files/ENCFF465CEB/@@download/ENCFF465CEB.bam ENCFF692TYF https://www.encodeproject.org/files/ENCFF692TYF/@@download/ENCFF692TYF.bam 53.9 M 0 51.0 M 0.947 PE 100 100 native 22.8 M 0.0 M 20.9 M 0.778 0.92 0.92 12.30 205 1.12 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/06f5aee3-2a4f-4ae5-978a-080ddd61f842/@@download/cross_correlation_plot/ENCFF177PDIENCFF061MAR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB375YYG michael-snyder:L-1995 "ENCFF177PDI,ENCFF061MAR" HiSeq 2000 2016-10-08T07:50:34.307686+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbK400jv1xPyfX78Yz4Y7X ENCSR459FTB https://www.encodeproject.org/experiments/ENCSR459FTB transcription factor UBTF-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF898VJT https://www.encodeproject.org/files/ENCFF898VJT/@@download/ENCFF898VJT.bam ENCFF033TCK https://www.encodeproject.org/files/ENCFF033TCK/@@download/ENCFF033TCK.bam 28.6 M 0 28.1 M 0.983 SE 36 36 native 0.0 M 20.3 M 19.4 M 0.679 0.96 0.96 22.28 105 1.02 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/95decfb3-b4a3-493c-a14e-29515e71090c/@@download/cross_correlation_plot/ENCFF002EDC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB684SXP michael-snyder:UBTF_SAB1404509_GM12878_Rep1 ENCFF002EDC Illumina Genome Analyzer IIx 2016-10-09T17:00:11.644688+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49Zj0jv1QxJBfj5Zb2pqv ENCSR459FTB https://www.encodeproject.org/experiments/ENCSR459FTB transcription factor UBTF-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF396GSL https://www.encodeproject.org/files/ENCFF396GSL/@@download/ENCFF396GSL.bam ENCFF390GUF https://www.encodeproject.org/files/ENCFF390GUF/@@download/ENCFF390GUF.bam 22.1 M 0 20.9 M 0.947 SE 36 36 native 0.0 M 14.8 M 13.0 M 0.589 0.88 0.87 7.71 110 1.05 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e309c13-6cf4-4d23-b33f-b1ca4f03a1ff/@@download/cross_correlation_plot/ENCFF002EDB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB465JXC michael-snyder:UBTF_SAB1404509_GM12878_Rep2 ENCFF002EDB Illumina Genome Analyzer IIx 2016-10-09T16:59:42.551974+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49f80jv1QxJBfj5Zb2pv4 ENCSR583AEG https://www.encodeproject.org/experiments/ENCSR583AEG "transcription factor,chromatin remodeller" UTY-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF466CPR https://www.encodeproject.org/files/ENCFF466CPR/@@download/ENCFF466CPR.bam ENCFF053WCP https://www.encodeproject.org/files/ENCFF053WCP/@@download/ENCFF053WCP.bam 47.8 M 0 44.9 M 0.938 PE 100 100 native 20.0 M 0.0 M 17.1 M 0.716 0.86 0.86 6.84 210 1.12 3.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/e04c92ff-a212-4f44-8780-424a3309615d/@@download/cross_correlation_plot/ENCFF772TSCENCFF375XNV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB551VDV michael-snyder:L-1998 "ENCFF375XNV,ENCFF772TSC" HiSeq 2000 2016-10-09T17:11:18.014584+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jVj0jv1XYYX2Fxk3f4Z7 ENCSR583AEG https://www.encodeproject.org/experiments/ENCSR583AEG "transcription factor,chromatin remodeller" UTY-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF418QHF https://www.encodeproject.org/files/ENCFF418QHF/@@download/ENCFF418QHF.bam ENCFF421KUU https://www.encodeproject.org/files/ENCFF421KUU/@@download/ENCFF421KUU.bam 48.2 M 0 44.6 M 0.927 PE 100 100 native 20.0 M 0.0 M 18.1 M 0.750 0.91 0.90 10.39 205 1.10 3.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/78d80f0a-4122-4954-9a13-f86504f1c85b/@@download/cross_correlation_plot/ENCFF075LFUENCFF221DHG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB815JXO michael-snyder:L-1999 "ENCFF221DHG,ENCFF075LFU" HiSeq 2000 2016-10-09T17:11:14.646722+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jY80jv1zBYbxYJ5zzyxZ ENCSR000EAA https://www.encodeproject.org/experiments/ENCSR000EAA transcription factor WRNIP1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF473BSK https://www.encodeproject.org/files/ENCFF473BSK/@@download/ENCFF473BSK.bam ENCFF042NGB https://www.encodeproject.org/files/ENCFF042NGB/@@download/ENCFF042NGB.bam 27.7 M 0 22.2 M 0.800 SE 36 28 28 0.0 M 14.6 M 14.2 M 0.511 0.97 0.97 37.57 140 1.05 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/5452d30a-5049-4ffc-927c-08f425cc2456/@@download/cross_correlation_plot/ENCFF000WGD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGH ENCFF000WGD Illumina Genome Analyzer 2017-01-05T21:29:12.218957+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7fPQ0369Kbx0VG4x74017 ENCSR000EAA https://www.encodeproject.org/experiments/ENCSR000EAA transcription factor WRNIP1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF070YVD https://www.encodeproject.org/files/ENCFF070YVD/@@download/ENCFF070YVD.bam ENCFF616FGG https://www.encodeproject.org/files/ENCFF616FGG/@@download/ENCFF616FGG.bam 27.9 M 0 22.4 M 0.803 SE 36 28 28 0.0 M 14.7 M 14.3 M 0.513 0.97 0.97 35.61 150 1.06 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ca02b50-089a-47e4-af43-45bd1cf3eba5/@@download/cross_correlation_plot/ENCFF000WGE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUO ENCFF000WGE Illumina Genome Analyzer 2017-01-05T21:28:39.201495+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7fZQ03699GG65G542pjXj ENCSR205SKQ https://www.encodeproject.org/experiments/ENCSR205SKQ "RNA binding protein,transcription factor" YBX1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF053VFZ https://www.encodeproject.org/files/ENCFF053VFZ/@@download/ENCFF053VFZ.bam ENCFF675OUX https://www.encodeproject.org/files/ENCFF675OUX/@@download/ENCFF675OUX.bam 57.8 M 0 55.6 M 0.963 PE 100 100 native 24.6 M 0.0 M 23.5 M 0.814 0.96 0.96 22.15 200 1.07 5.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/df58d6ac-de59-4e04-b558-d63e9fdbd311/@@download/cross_correlation_plot/ENCFF379KSRENCFF441WIT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB159YJL michael-snyder:L-2000 "ENCFF441WIT,ENCFF379KSR" HiSeq 2000 2016-10-09T17:03:50.310743+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44j80jv1f60PxyZ9JGP54 ENCSR205SKQ https://www.encodeproject.org/experiments/ENCSR205SKQ "RNA binding protein,transcription factor" YBX1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF629WCK https://www.encodeproject.org/files/ENCFF629WCK/@@download/ENCFF629WCK.bam ENCFF922RKY https://www.encodeproject.org/files/ENCFF922RKY/@@download/ENCFF922RKY.bam 62.0 M 0 59.7 M 0.962 PE 100 100 native 26.5 M 0.0 M 25.5 M 0.823 0.97 0.97 28.92 205 1.06 5.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9a73db3-3645-48af-b471-e0523c2c2542/@@download/cross_correlation_plot/ENCFF708BOTENCFF025TUY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB927CUY michael-snyder:L-2001 "ENCFF025TUY,ENCFF708BOT" HiSeq 2000 2016-10-09T17:04:13.954502+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44kj0jv1xPyfX78Yz4j16 ENCSR542FLV https://www.encodeproject.org/experiments/ENCSR542FLV transcription factor ZBTB33-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF403QBQ https://www.encodeproject.org/files/ENCFF403QBQ/@@download/ENCFF403QBQ.bam ENCFF727OFM https://www.encodeproject.org/files/ENCFF727OFM/@@download/ENCFF727OFM.bam 68.4 M 0 66.3 M 0.970 PE 100 100 native 28.4 M 0.0 M 25.9 M 0.758 0.91 0.91 11.14 200 1.07 4.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d0d0876-6bc3-426e-862c-dc2f3bad4148/@@download/cross_correlation_plot/ENCFF517FFTENCFF016LTD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB397QCK michael-snyder:L-3026 "ENCFF517FFT,ENCFF016LTD" HiSeq 2000 2016-10-27T22:23:30.580206+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bky003695YX1xgJBKFkp7 ENCSR542FLV https://www.encodeproject.org/experiments/ENCSR542FLV transcription factor ZBTB33-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF882PSU https://www.encodeproject.org/files/ENCFF882PSU/@@download/ENCFF882PSU.bam ENCFF571LVG https://www.encodeproject.org/files/ENCFF571LVG/@@download/ENCFF571LVG.bam 75.8 M 0 72.5 M 0.956 PE 100 100 native 31.0 M 0.0 M 25.8 M 0.681 0.83 0.83 5.75 170 1.09 3.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/3937d696-9c32-42df-a96f-5cdf11ab9a3c/@@download/cross_correlation_plot/ENCFF800ZFBENCFF688CLE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB316XFH michael-snyder:L-3027 "ENCFF688CLE,ENCFF800ZFB" HiSeq 2000 2016-10-27T22:26:16.442713+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bp1Q0369GJ6xQfbB7F5yG ENCSR900XDB https://www.encodeproject.org/experiments/ENCSR900XDB "RNA binding protein,transcription factor" ZFP36-human GM12878 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF185OAP https://www.encodeproject.org/files/ENCFF185OAP/@@download/ENCFF185OAP.bam ENCFF704DLD https://www.encodeproject.org/files/ENCFF704DLD/@@download/ENCFF704DLD.bam 29.7 M 0 28.9 M 0.972 SE 36 36 native 0.0 M 22.5 M 20.8 M 0.701 0.93 0.93 15.41 130 1.05 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf773c34-6bd1-48e8-a980-0651e77e7cd3/@@download/cross_correlation_plot/ENCFF002ECD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827EFP michael-snyder:ZFP36_T5327_GM12878_Rep4 ENCFF002ECD Illumina Genome Analyzer IIx 2016-10-29T18:00:23.692148+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B281Q0jv1xKJFVg9KK46bj ENCSR900XDB https://www.encodeproject.org/experiments/ENCSR900XDB "RNA binding protein,transcription factor" ZFP36-human GM12878 immortalized cell line 5 michael-snyder ENCODE3 GRCh38 ENCFF302YQK https://www.encodeproject.org/files/ENCFF302YQK/@@download/ENCFF302YQK.bam ENCFF126UEC https://www.encodeproject.org/files/ENCFF126UEC/@@download/ENCFF126UEC.bam 33.4 M 0 31.8 M 0.950 SE 36 36 native 0.0 M 24.9 M 22.2 M 0.664 0.89 0.89 9.10 130 1.05 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fd7c345-6fc4-4fe2-bb04-a8480a2bd4b7/@@download/cross_correlation_plot/ENCFF002ECH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB012KKL michael-snyder:ZFP36_T5327_GM12878_Rep5 ENCFF002ECH Illumina Genome Analyzer IIx 2016-10-29T18:00:17.592604+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B283j0jv1xKJFVg9KK46f1 ENCSR117KWH https://www.encodeproject.org/experiments/ENCSR117KWH transcription factor ZNF207-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF856SJL https://www.encodeproject.org/files/ENCFF856SJL/@@download/ENCFF856SJL.bam ENCFF530LAJ https://www.encodeproject.org/files/ENCFF530LAJ/@@download/ENCFF530LAJ.bam 89.3 M 0 87.6 M 0.981 PE 100 100 native 39.4 M 0.0 M 35.0 M 0.784 0.89 0.89 8.70 245 1.06 6.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/54218a77-9a58-45f2-a48f-f62df80d0e99/@@download/cross_correlation_plot/ENCFF002DOMENCFF002EHO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB260JAG michael-snyder:709_B_TruSeq_CGATGT "ENCFF002EHO,ENCFF002DOM" HiSeq 2000 2016-10-09T17:43:05.707780+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qFQ0jv1QZp37BGvK2BGv ENCSR117KWH https://www.encodeproject.org/experiments/ENCSR117KWH transcription factor ZNF207-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF360OZT https://www.encodeproject.org/files/ENCFF360OZT/@@download/ENCFF360OZT.bam ENCFF856PTQ https://www.encodeproject.org/files/ENCFF856PTQ/@@download/ENCFF856PTQ.bam 92.5 M 0 90.4 M 0.978 PE 100 100 native 41.1 M 0.0 M 34.6 M 0.748 0.84 0.84 6.01 230 1.06 4.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/6145300c-6d73-41ec-864a-f2de6fea84b3/@@download/cross_correlation_plot/ENCFF002EHPENCFF002DOQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB779CDZ michael-snyder:709_B_TruSeq_TGACCA "ENCFF002EHP,ENCFF002DOQ" HiSeq 2000 2016-10-09T17:42:43.926804+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qJQ0jv1fXGPZpVVpjYP7 ENCSR000DYP https://www.encodeproject.org/experiments/ENCSR000DYP transcription factor ZNF384-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF055QMP https://www.encodeproject.org/files/ENCFF055QMP/@@download/ENCFF055QMP.bam ENCFF752WMS https://www.encodeproject.org/files/ENCFF752WMS/@@download/ENCFF752WMS.bam 29.1 M 0 27.9 M 0.959 SE 36 28 28 0.0 M 19.7 M 18.7 M 0.643 0.95 0.95 21.35 110 1.15 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/149705b4-caa5-402a-a818-644daa56fedc/@@download/cross_correlation_plot/ENCFF000WGZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUM ENCFF000WGZ Illumina Genome Analyzer 2017-01-05T21:31:13.539019+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7ZZQ03697FPkPG58gbpYV ENCSR000DYP https://www.encodeproject.org/experiments/ENCSR000DYP transcription factor ZNF384-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF230KKA https://www.encodeproject.org/files/ENCFF230KKA/@@download/ENCFF230KKA.bam ENCFF067MJG https://www.encodeproject.org/files/ENCFF067MJG/@@download/ENCFF067MJG.bam 29.5 M 0 27.5 M 0.932 SE 36 28 28 0.0 M 19.5 M 17.3 M 0.588 0.89 0.89 8.67 100 1.07 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/93fa2097-9bd4-4acc-827d-bb6c23632ba7/@@download/cross_correlation_plot/ENCFF000WHB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFV ENCFF000WHB Illumina Genome Analyzer 2017-01-05T21:30:58.398215+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Zfj03697J9fxG4f90kVp ENCSR075FNZ https://www.encodeproject.org/experiments/ENCSR075FNZ "RNA binding protein,transcription factor" ZNF622-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF993SEE https://www.encodeproject.org/files/ENCFF993SEE/@@download/ENCFF993SEE.bam ENCFF814JNQ https://www.encodeproject.org/files/ENCFF814JNQ/@@download/ENCFF814JNQ.bam 100.5 M 0 94.7 M 0.942 PE 100 100 native 41.1 M 0.0 M 36.5 M 0.727 0.89 0.89 8.74 205 1.04 3.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/641d0b7e-89a3-4059-8d34-3028f1b69c73/@@download/cross_correlation_plot/ENCFF181GHZENCFF421JAE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB299ORB michael-snyder:L-2141 "ENCFF181GHZ,ENCFF421JAE" HiSeq 4000 2016-10-27T22:37:51.630185+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bQy803694q32PPxBJ6Zvb ENCSR075FNZ https://www.encodeproject.org/experiments/ENCSR075FNZ "RNA binding protein,transcription factor" ZNF622-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF416IVW https://www.encodeproject.org/files/ENCFF416IVW/@@download/ENCFF416IVW.bam ENCFF905IMC https://www.encodeproject.org/files/ENCFF905IMC/@@download/ENCFF905IMC.bam 150.0 M 0 142.5 M 0.950 PE 100 100 native 63.4 M 0.0 M 44.3 M 0.591 0.70 0.69 3.13 215 1.04 5.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/63465c07-1709-4e62-9205-6704771b694c/@@download/cross_correlation_plot/ENCFF747YTVENCFF018QJY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB710OFW michael-snyder:L-2142 "ENCFF018QJY,ENCFF747YTV" HiSeq 4000 2016-10-27T22:37:43.559020+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bV3Q036923z1QYVBPp7zx ENCSR859FDL https://www.encodeproject.org/experiments/ENCSR859FDL transcription factor ZNF687-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF529JDU https://www.encodeproject.org/files/ENCFF529JDU/@@download/ENCFF529JDU.bam ENCFF078RWZ https://www.encodeproject.org/files/ENCFF078RWZ/@@download/ENCFF078RWZ.bam 94.2 M 0 91.9 M 0.976 PE 100 100 native 41.2 M 0.0 M 34.5 M 0.733 0.84 0.84 5.99 165 1.09 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/191e331f-9711-4783-af8e-dd5fd164fa2d/@@download/cross_correlation_plot/ENCFF814CFQENCFF253VDT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB875SAF michael-snyder:L-3503 "ENCFF814CFQ,ENCFF253VDT" HiSeq 4000 2017-06-23T02:53:12.730008+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560ZG803695by0292QV24VZ ENCSR859FDL https://www.encodeproject.org/experiments/ENCSR859FDL transcription factor ZNF687-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF257XYL https://www.encodeproject.org/files/ENCFF257XYL/@@download/ENCFF257XYL.bam ENCFF197RPF https://www.encodeproject.org/files/ENCFF197RPF/@@download/ENCFF197RPF.bam 92.4 M 0 89.9 M 0.973 PE 100 100 native 40.2 M 0.0 M 31.8 M 0.687 0.79 0.79 4.55 160 1.10 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbc97515-64f0-48a2-acd1-f5da18278fbb/@@download/cross_correlation_plot/ENCFF452DGQENCFF271IUJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830XBR michael-snyder:L-3504 "ENCFF452DGQ,ENCFF271IUJ" HiSeq 4000 2017-06-23T02:13:33.681002+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560ZPQ0369Ffkvy0Zf6p5kx ENCSR000EBQ https://www.encodeproject.org/experiments/ENCSR000EBQ transcription factor BACH1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF517LYO https://www.encodeproject.org/files/ENCFF517LYO/@@download/ENCFF517LYO.bam ENCFF757ZWI https://www.encodeproject.org/files/ENCFF757ZWI/@@download/ENCFF757ZWI.bam 32.0 M 0 30.5 M 0.952 SE 36 36 native 0.0 M 23.8 M 22.4 M 0.699 0.95 0.95 19.33 115 1.07 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/67a74299-03e0-4225-b218-e19aee16870a/@@download/cross_correlation_plot/ENCFF000WQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQA ENCFF000WQI Illumina Genome Analyzer 2016-12-11T03:05:41.402829+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1642J80369Bxb30J6x5bZBb ENCSR000EBQ https://www.encodeproject.org/experiments/ENCSR000EBQ transcription factor BACH1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF223DHM https://www.encodeproject.org/files/ENCFF223DHM/@@download/ENCFF223DHM.bam ENCFF413XOW https://www.encodeproject.org/files/ENCFF413XOW/@@download/ENCFF413XOW.bam 32.0 M 0 29.6 M 0.927 SE 36 36 native 0.0 M 22.5 M 20.5 M 0.641 0.92 0.92 12.01 120 1.07 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/925f8d3f-fcfa-4008-9901-51fa984c8fb9/@@download/cross_correlation_plot/ENCFF000WQL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQC ENCFF000WQL Illumina Genome Analyzer 2016-12-11T02:56:43.169046+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1642Vj036969X0jJ6p3ffkb ENCSR000EBX https://www.encodeproject.org/experiments/ENCSR000EBX transcription factor BRCA1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF850FEF https://www.encodeproject.org/files/ENCFF850FEF/@@download/ENCFF850FEF.bam ENCFF882HGZ https://www.encodeproject.org/files/ENCFF882HGZ/@@download/ENCFF882HGZ.bam 31.4 M 0 30.4 M 0.968 SE 36 36 native 0.0 M 23.5 M 22.4 M 0.713 0.96 0.96 22.99 125 1.03 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3810334-0b4e-4102-939c-1872525d61e6/@@download/cross_correlation_plot/ENCFF000WQT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHS ENCFF000WQT Illumina Genome Analyzer 2016-12-11T04:04:30.700126+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164yXQ0369KbxV61z4GFvPz ENCSR000EBX https://www.encodeproject.org/experiments/ENCSR000EBX transcription factor BRCA1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF398CZS https://www.encodeproject.org/files/ENCFF398CZS/@@download/ENCFF398CZS.bam ENCFF106HFQ https://www.encodeproject.org/files/ENCFF106HFQ/@@download/ENCFF106HFQ.bam 26.8 M 0 25.7 M 0.959 SE 36 36 native 0.0 M 19.4 M 18.3 M 0.685 0.95 0.95 18.96 110 1.06 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/e43a27f5-7247-4e69-8559-d1947d883ae0/@@download/cross_correlation_plot/ENCFF000WQV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABJ ENCFF000WQV Illumina Genome Analyzer 2016-12-11T04:01:08.973808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164yg80369BgG8x1ygv1X8z ENCSR000EBV https://www.encodeproject.org/experiments/ENCSR000EBV transcription factor CEBPB-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF212PJG https://www.encodeproject.org/files/ENCFF212PJG/@@download/ENCFF212PJG.bam ENCFF702PMJ https://www.encodeproject.org/files/ENCFF702PMJ/@@download/ENCFF702PMJ.bam 27.2 M 0 26.7 M 0.984 SE 36 36 native 0.0 M 20.4 M 19.2 M 0.707 0.94 0.94 17.29 110 1.13 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/288e7475-4bf5-447b-8cab-587d0f8f26e7/@@download/cross_correlation_plot/ENCFF000WRB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACK ENCFF000WRB Illumina Genome Analyzer 2016-12-11T04:55:46.816946+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16671j03692yykb1zBpz83Y ENCSR000EBV https://www.encodeproject.org/experiments/ENCSR000EBV transcription factor CEBPB-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF506VMG https://www.encodeproject.org/files/ENCFF506VMG/@@download/ENCFF506VMG.bam ENCFF144SYZ https://www.encodeproject.org/files/ENCFF144SYZ/@@download/ENCFF144SYZ.bam 25.4 M 0 24.6 M 0.969 SE 36 36 native 0.0 M 18.5 M 17.9 M 0.704 0.97 0.97 34.69 120 1.08 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/17767eff-58e5-457a-b177-23c41ac04071/@@download/cross_correlation_plot/ENCFF000WRD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALD ENCFF000WRD Illumina Genome Analyzer 2016-12-11T04:55:26.897011+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667780369KbxV61z4GFvx0 ENCSR000EBU https://www.encodeproject.org/experiments/ENCSR000EBU "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF962DWV https://www.encodeproject.org/files/ENCFF962DWV/@@download/ENCFF962DWV.bam ENCFF051TPA https://www.encodeproject.org/files/ENCFF051TPA/@@download/ENCFF051TPA.bam 30.7 M 0 30.1 M 0.980 SE 36 36 native 0.0 M 23.2 M 21.8 M 0.710 0.94 0.94 15.63 110 1.03 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/654563bb-9ec1-4025-bfac-fb51dca5d974/@@download/cross_correlation_plot/ENCFF000WRJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEE ENCFF000WRJ Illumina Genome Analyzer 2016-12-10T21:02:30.715357+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16306003699Z3Y8493qbp56 ENCSR000EBU https://www.encodeproject.org/experiments/ENCSR000EBU "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF607NRH https://www.encodeproject.org/files/ENCFF607NRH/@@download/ENCFF607NRH.bam ENCFF228RNE https://www.encodeproject.org/files/ENCFF228RNE/@@download/ENCFF228RNE.bam 25.6 M 0 24.9 M 0.973 SE 36 36 native 0.0 M 18.2 M 17.8 M 0.694 0.98 0.98 40.24 120 1.03 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/46d2750e-af6d-4fb7-8252-be94b31c3649/@@download/cross_correlation_plot/ENCFF000WRL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADQ ENCFF000WRL Illumina Genome Analyzer 2016-12-10T21:00:31.971487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1630Bj03699Z3Y8493qbp5P ENCSR000EBP https://www.encodeproject.org/experiments/ENCSR000EBP "RNA binding protein,transcription factor" GTF2F1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF358UEX https://www.encodeproject.org/files/ENCFF358UEX/@@download/ENCFF358UEX.bam ENCFF995YFW https://www.encodeproject.org/files/ENCFF995YFW/@@download/ENCFF995YFW.bam 31.2 M 0 30.0 M 0.961 SE 36 36 native 0.0 M 22.5 M 22.1 M 0.706 0.98 0.98 49.94 90 1.03 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/716f7f41-dc64-4de3-9ff6-b984a88cfa93/@@download/cross_correlation_plot/ENCFF000WSQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOO ENCFF000WSQ Illumina Genome Analyzer 2016-12-11T04:30:02.826257+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165VV803697yz601ypVJ3fb ENCSR000EBP https://www.encodeproject.org/experiments/ENCSR000EBP "RNA binding protein,transcription factor" GTF2F1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF484ZQH https://www.encodeproject.org/files/ENCFF484ZQH/@@download/ENCFF484ZQH.bam ENCFF760ZDJ https://www.encodeproject.org/files/ENCFF760ZDJ/@@download/ENCFF760ZDJ.bam 23.7 M 0 22.7 M 0.961 SE 36 36 native 0.0 M 17.5 M 16.3 M 0.691 0.93 0.93 14.72 110 1.04 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/09aa43e6-934a-4b0d-9e8a-ab12ba460614/@@download/cross_correlation_plot/ENCFF000WSS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AON ENCFF000WSS Illumina Genome Analyzer 2016-12-11T04:24:43.772200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Vf00369BJyPz9fb9qYG1 ENCSR000ECA https://www.encodeproject.org/experiments/ENCSR000ECA transcription factor JUN-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF864PHP https://www.encodeproject.org/files/ENCFF864PHP/@@download/ENCFF864PHP.bam ENCFF233HJU https://www.encodeproject.org/files/ENCFF233HJU/@@download/ENCFF233HJU.bam 31.4 M 0 27.1 M 0.863 SE 36 36 native 0.0 M 20.6 M 17.0 M 0.540 0.82 0.82 5.16 120 1.05 2.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/e865819f-187e-484f-9ba3-c7a6662963b8/@@download/cross_correlation_plot/ENCFF000WSW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQH ENCFF000WSW Illumina Genome Analyzer 2016-12-11T02:32:57.776282+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163qgj03697vfpg2qKbyZJk ENCSR000ECA https://www.encodeproject.org/experiments/ENCSR000ECA transcription factor JUN-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF050VGU https://www.encodeproject.org/files/ENCFF050VGU/@@download/ENCFF050VGU.bam ENCFF700FWX https://www.encodeproject.org/files/ENCFF700FWX/@@download/ENCFF700FWX.bam 32.8 M 0 28.4 M 0.866 SE 36 36 native 0.0 M 21.7 M 19.0 M 0.582 0.88 0.88 7.85 110 1.04 2.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/55cf4001-4aa2-4b47-90e6-b7f5d9ade233/@@download/cross_correlation_plot/ENCFF000WSV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKZ ENCFF000WSV Illumina Genome Analyzer 2016-12-11T02:30:20.602942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163qvQ03692pJ09J76g5g2b ENCSR000EBZ https://www.encodeproject.org/experiments/ENCSR000EBZ transcription factor JUND-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF460PKZ https://www.encodeproject.org/files/ENCFF460PKZ/@@download/ENCFF460PKZ.bam ENCFF168FJY https://www.encodeproject.org/files/ENCFF168FJY/@@download/ENCFF168FJY.bam 31.0 M 0 30.2 M 0.973 SE 36 36 native 0.0 M 22.9 M 21.6 M 0.697 0.95 0.95 20.72 120 1.09 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/c617a89e-6f3e-4e2a-a62c-9cbff0f6ff50/@@download/cross_correlation_plot/ENCFF000WTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKA ENCFF000WTF Illumina Genome Analyzer 2016-12-10T18:59:50.124452+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162JjQ03697yz601ypVJ363 ENCSR000EBZ https://www.encodeproject.org/experiments/ENCSR000EBZ transcription factor JUND-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF963DAM https://www.encodeproject.org/files/ENCFF963DAM/@@download/ENCFF963DAM.bam ENCFF568WZX https://www.encodeproject.org/files/ENCFF568WZX/@@download/ENCFF568WZX.bam 30.7 M 0 29.2 M 0.952 SE 36 36 native 0.0 M 22.7 M 19.9 M 0.650 0.88 0.88 8.15 120 1.06 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/c527c496-981c-4f59-a725-787e91985744/@@download/cross_correlation_plot/ENCFF000WTH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUY ENCFF000WTH Illumina Genome Analyzer 2016-12-10T18:57:01.376416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162JxQ036933PVVJ7Qq015f ENCSR000EBR https://www.encodeproject.org/experiments/ENCSR000EBR transcription factor MXI1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF995WDJ https://www.encodeproject.org/files/ENCFF995WDJ/@@download/ENCFF995WDJ.bam ENCFF938AXA https://www.encodeproject.org/files/ENCFF938AXA/@@download/ENCFF938AXA.bam 33.8 M 0 32.5 M 0.959 SE 36 36 native 0.0 M 24.7 M 24.0 M 0.709 0.97 0.97 36.51 90 1.03 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f9ae6f6-5036-4ca7-99b6-af37862be2d5/@@download/cross_correlation_plot/ENCFF000WUC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMY ENCFF000WUC Illumina Genome Analyzer 2016-12-11T04:47:39.443204+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xQ00369BgG8x1ygv1XXj ENCSR000EBR https://www.encodeproject.org/experiments/ENCSR000EBR transcription factor MXI1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF177BJF https://www.encodeproject.org/files/ENCFF177BJF/@@download/ENCFF177BJF.bam ENCFF355DJV https://www.encodeproject.org/files/ENCFF355DJV/@@download/ENCFF355DJV.bam 28.0 M 0 27.2 M 0.973 SE 36 36 native 0.0 M 20.8 M 19.5 M 0.698 0.94 0.94 15.79 110 1.05 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/a231e545-9e28-4f01-9e71-7f143b94e1aa/@@download/cross_correlation_plot/ENCFF000WUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMZ ENCFF000WUE Illumina Genome Analyzer 2016-12-11T04:44:18.958560+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xZj0369BgG8x1ygv1XY2 ENCSR000ECC https://www.encodeproject.org/experiments/ENCSR000ECC transcription factor NRF1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF060DJH https://www.encodeproject.org/files/ENCFF060DJH/@@download/ENCFF060DJH.bam ENCFF744FCP https://www.encodeproject.org/files/ENCFF744FCP/@@download/ENCFF744FCP.bam 32.1 M 0 27.3 M 0.850 SE 36 36 native 0.0 M 20.9 M 18.3 M 0.571 0.88 0.88 7.91 110 1.07 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d47f5e93-fdd2-4532-8350-af9c1f5f4c6f/@@download/cross_correlation_plot/ENCFF000WUR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAP ENCFF000WUR Illumina Genome Analyzer 2016-12-12T17:21:09.109362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1623v0036933PVVJ7Qq0138 ENCSR000ECC https://www.encodeproject.org/experiments/ENCSR000ECC transcription factor NRF1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF100HXA https://www.encodeproject.org/files/ENCFF100HXA/@@download/ENCFF100HXA.bam ENCFF649EVF https://www.encodeproject.org/files/ENCFF649EVF/@@download/ENCFF649EVF.bam 37.1 M 0 32.6 M 0.879 SE 36 36 native 0.0 M 24.4 M 22.1 M 0.596 0.91 0.91 10.45 110 1.08 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/cbdaa37f-ba89-4ba4-8ec3-1796aeb547af/@@download/cross_correlation_plot/ENCFF000WUS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAI ENCFF000WUS Illumina Genome Analyzer 2016-12-12T17:21:22.895221+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16240803690xXYVJ7Fj2bkQ ENCSR000ECF https://www.encodeproject.org/experiments/ENCSR000ECF transcription factor RFX5-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF471WJE https://www.encodeproject.org/files/ENCFF471WJE/@@download/ENCFF471WJE.bam ENCFF539UVI https://www.encodeproject.org/files/ENCFF539UVI/@@download/ENCFF539UVI.bam 28.1 M 0 23.3 M 0.829 SE 36 36 native 0.0 M 17.5 M 16.4 M 0.582 0.94 0.94 16.59 120 1.05 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5080bc6-b364-4257-8b12-ae596a1f2ba7/@@download/cross_correlation_plot/ENCFF000WVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFJ ENCFF000WVQ Illumina Genome Analyzer 2016-12-10T20:39:59.844577+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162bxj03699Z3Y8493qbp2p ENCSR000ECF https://www.encodeproject.org/experiments/ENCSR000ECF transcription factor RFX5-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF259GVS https://www.encodeproject.org/files/ENCFF259GVS/@@download/ENCFF259GVS.bam ENCFF518KLK https://www.encodeproject.org/files/ENCFF518KLK/@@download/ENCFF518KLK.bam 41.8 M 0 37.7 M 0.901 SE 36 36 native 0.0 M 28.3 M 26.5 M 0.632 0.94 0.94 18.37 135 1.06 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d364656-6cf3-4f15-88f3-1103fdea7aca/@@download/cross_correlation_plot/ENCFF000WVR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADR ENCFF000WVR Illumina Genome Analyzer 2016-12-10T20:49:12.024797+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162f3003697K4B1J71pxzXj ENCSR000EBO https://www.encodeproject.org/experiments/ENCSR000EBO transcription factor SIN3A-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF842TOK https://www.encodeproject.org/files/ENCFF842TOK/@@download/ENCFF842TOK.bam ENCFF145JNZ https://www.encodeproject.org/files/ENCFF145JNZ/@@download/ENCFF145JNZ.bam 31.8 M 0 31.0 M 0.973 SE 36 36 native 0.0 M 24.2 M 23.5 M 0.737 0.97 0.97 34.79 110 1.10 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/6472dc55-ece1-4dbb-a70a-df701761904a/@@download/cross_correlation_plot/ENCFF000WVE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIK ENCFF000WVE Illumina Genome Analyzer 2016-12-11T03:57:15.892247+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164kG003697yz601ypVJ3P3 ENCSR000EBO https://www.encodeproject.org/experiments/ENCSR000EBO transcription factor SIN3A-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF018COR https://www.encodeproject.org/files/ENCFF018COR/@@download/ENCFF018COR.bam ENCFF217OHF https://www.encodeproject.org/files/ENCFF217OHF/@@download/ENCFF217OHF.bam 32.2 M 0 31.2 M 0.969 SE 36 36 native 0.0 M 24.0 M 22.9 M 0.712 0.96 0.96 22.56 90 1.10 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/959eda8e-760c-452a-84e0-cb2e8dde7cf9/@@download/cross_correlation_plot/ENCFF000WVG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABB ENCFF000WVG Illumina Genome Analyzer 2016-12-11T03:56:28.314381+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164kQj0369GF0YB1zjPf6g6 ENCSR000ECB https://www.encodeproject.org/experiments/ENCSR000ECB transcription factor TBP-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF814NIM https://www.encodeproject.org/files/ENCFF814NIM/@@download/ENCFF814NIM.bam ENCFF904SVM https://www.encodeproject.org/files/ENCFF904SVM/@@download/ENCFF904SVM.bam 33.0 M 0 29.9 M 0.906 SE 36 36 native 0.0 M 21.9 M 20.1 M 0.610 0.93 0.96 25.69 130 1.30 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f78db6f-e4dc-4729-a5b6-481f85751736/@@download/cross_correlation_plot/ENCFF000WWI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGQ ENCFF000WWI Illumina Genome Analyzer 2016-12-11T03:59:07.020746+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164x8003692pJ09J76g5g6B ENCSR000ECB https://www.encodeproject.org/experiments/ENCSR000ECB transcription factor TBP-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF111DMT https://www.encodeproject.org/files/ENCFF111DMT/@@download/ENCFF111DMT.bam ENCFF906DLE https://www.encodeproject.org/files/ENCFF906DLE/@@download/ENCFF906DLE.bam 30.1 M 0 24.9 M 0.829 SE 36 36 native 0.0 M 18.6 M 16.7 M 0.555 0.91 0.92 12.89 155 1.20 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/617bfd93-673a-417a-940e-a9698ece1038/@@download/cross_correlation_plot/ENCFF000WWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVE ENCFF000WWK Illumina Genome Analyzer 2016-12-11T03:56:44.110611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164xGQ0369GF0YB1zjPf6jP ENCSR000ECD https://www.encodeproject.org/experiments/ENCSR000ECD transcription factor USF2-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF992YZZ https://www.encodeproject.org/files/ENCFF992YZZ/@@download/ENCFF992YZZ.bam ENCFF231PNQ https://www.encodeproject.org/files/ENCFF231PNQ/@@download/ENCFF231PNQ.bam 33.3 M 0 30.5 M 0.914 SE 36 36 native 0.0 M 22.8 M 22.4 M 0.671 0.98 0.98 58.51 110 1.06 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/c69046e1-2252-4208-a0ae-76ce2625380d/@@download/cross_correlation_plot/ENCFF000WWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHB ENCFF000WWJ Illumina Genome Analyzer 2016-12-11T04:17:58.686427+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165FV8036993F1b953B4Q59 ENCSR000ECD https://www.encodeproject.org/experiments/ENCSR000ECD transcription factor USF2-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF420VTB https://www.encodeproject.org/files/ENCFF420VTB/@@download/ENCFF420VTB.bam ENCFF911KLJ https://www.encodeproject.org/files/ENCFF911KLJ/@@download/ENCFF911KLJ.bam 42.7 M 0 38.5 M 0.901 SE 36 36 native 0.0 M 28.4 M 27.1 M 0.636 0.96 0.96 24.87 120 1.07 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/e75c1252-3065-4e4f-b89b-2888545e8fab/@@download/cross_correlation_plot/ENCFF000WWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGP ENCFF000WWS Illumina Genome Analyzer 2016-12-11T04:30:46.024417+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Fbj0369BJyPz9fb9qYB5 ENCSR000EBW https://www.encodeproject.org/experiments/ENCSR000EBW transcription factor ZNF143-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF016NAV https://www.encodeproject.org/files/ENCFF016NAV/@@download/ENCFF016NAV.bam ENCFF311VXK https://www.encodeproject.org/files/ENCFF311VXK/@@download/ENCFF311VXK.bam 32.1 M 0 31.1 M 0.969 SE 36 36 native 0.0 M 23.4 M 22.4 M 0.699 0.96 0.97 40.41 110 1.24 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/72ed4843-a454-4362-8429-ea93e8c8f1da/@@download/cross_correlation_plot/ENCFF000WWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIM ENCFF000WWC Illumina Genome Analyzer 2016-12-11T03:38:01.194712+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164bqQ036933PVVJ7Qq01Zg ENCSR000EBW https://www.encodeproject.org/experiments/ENCSR000EBW transcription factor ZNF143-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF732IVC https://www.encodeproject.org/files/ENCFF732IVC/@@download/ENCFF732IVC.bam ENCFF537OYL https://www.encodeproject.org/files/ENCFF537OYL/@@download/ENCFF537OYL.bam 30.3 M 0 29.4 M 0.969 SE 36 36 native 0.0 M 21.8 M 20.7 M 0.685 0.95 0.96 27.72 110 1.23 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0d1d9e5-e16f-4861-96a8-2b2b3fccde12/@@download/cross_correlation_plot/ENCFF000WWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABL ENCFF000WWE Illumina Genome Analyzer 2016-12-11T03:36:23.532158+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164f0003692yykb1zBpz7g3 ENCSR778QLY https://www.encodeproject.org/experiments/ENCSR778QLY transcription factor ELF4-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF819DOC https://www.encodeproject.org/files/ENCFF819DOC/@@download/ENCFF819DOC.bam ENCFF688OOD https://www.encodeproject.org/files/ENCFF688OOD/@@download/ENCFF688OOD.bam 62.7 M 0 59.3 M 0.946 PE 100 100 native 23.6 M 0.0 M 21.8 M 0.694 0.92 0.92 12.51 210 1.08 4.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/97223d21-db80-455e-a69f-d62f04103537/@@download/cross_correlation_plot/ENCFF474NLUENCFF067QCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB677GAI michael-snyder:L-2968 "ENCFF474NLU,ENCFF067QCH" HiSeq 2000 2016-10-27T22:25:37.905062+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvbj0369PQyG3V5B45065 ENCSR778QLY https://www.encodeproject.org/experiments/ENCSR778QLY transcription factor ELF4-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF421ZIB https://www.encodeproject.org/files/ENCFF421ZIB/@@download/ENCFF421ZIB.bam ENCFF978INA https://www.encodeproject.org/files/ENCFF978INA/@@download/ENCFF978INA.bam 82.8 M 0 78.6 M 0.949 PE 100 100 native 31.4 M 0.0 M 28.9 M 0.699 0.92 0.92 12.71 195 1.07 3.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ab60218-b358-40db-978f-452483af2e1e/@@download/cross_correlation_plot/ENCFF439QJVENCFF242LHV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB772CWX michael-snyder:L-2969 "ENCFF242LHV,ENCFF439QJV" HiSeq 2000 2016-10-27T22:30:10.940927+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvk80369GJ6xQfbB7F60Y ENCSR094WHO https://www.encodeproject.org/experiments/ENCSR094WHO transcription factor FOXA1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF600NPD https://www.encodeproject.org/files/ENCFF600NPD/@@download/ENCFF600NPD.bam ENCFF210CBH https://www.encodeproject.org/files/ENCFF210CBH/@@download/ENCFF210CBH.bam 69.2 M 0 67.2 M 0.971 PE 100 100 native 29.1 M 0.0 M 25.6 M 0.742 0.88 0.88 8.17 205 1.06 5.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/72bb0315-100e-4f5e-b432-e9aef1c51610/@@download/cross_correlation_plot/ENCFF613WSVENCFF809EPG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB988ZBI michael-snyder:L-2972 "ENCFF613WSV,ENCFF809EPG" HiSeq 2000 2016-10-27T22:32:41.341457+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bYJj03697KPkyX9BPQF14 ENCSR094WHO https://www.encodeproject.org/experiments/ENCSR094WHO transcription factor FOXA1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF778ZCF https://www.encodeproject.org/files/ENCFF778ZCF/@@download/ENCFF778ZCF.bam ENCFF620RWC https://www.encodeproject.org/files/ENCFF620RWC/@@download/ENCFF620RWC.bam 56.8 M 0 55.1 M 0.970 PE 100 100 native 23.6 M 0.0 M 21.2 M 0.748 0.90 0.90 9.80 205 1.07 6.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/008ad88e-5455-4595-99ad-4fc45de03974/@@download/cross_correlation_plot/ENCFF017YSGENCFF691KWL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB983XLW michael-snyder:L-2973 "ENCFF017YSG,ENCFF691KWL" HiSeq 2000 2016-10-27T22:34:58.004128+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bYZQ0369GJ6xQfbB7F5pq ENCSR872BOU https://www.encodeproject.org/experiments/ENCSR872BOU transcription factor FOXK2-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF258WGM https://www.encodeproject.org/files/ENCFF258WGM/@@download/ENCFF258WGM.bam ENCFF844WOQ https://www.encodeproject.org/files/ENCFF844WOQ/@@download/ENCFF844WOQ.bam 114.4 M 0 110.8 M 0.968 PE 100 100 native 48.3 M 0.0 M 41.2 M 0.720 0.85 0.85 6.61 230 1.04 4.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb81ec65-5b20-4f09-b43b-345322557d74/@@download/cross_correlation_plot/ENCFF053MVOENCFF845QUV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB514CUO michael-snyder:L-3056 "ENCFF845QUV,ENCFF053MVO" HiSeq 4000 2016-10-27T22:17:36.129743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bygj03695YX1xgJBKFkxx ENCSR872BOU https://www.encodeproject.org/experiments/ENCSR872BOU transcription factor FOXK2-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF764EWY https://www.encodeproject.org/files/ENCFF764EWY/@@download/ENCFF764EWY.bam ENCFF036TDM https://www.encodeproject.org/files/ENCFF036TDM/@@download/ENCFF036TDM.bam 123.0 M 0 119.0 M 0.967 PE 100 100 native 51.8 M 0.0 M 42.3 M 0.688 0.82 0.81 5.27 235 1.03 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/1554d8c2-bc14-493f-8b61-05766462c532/@@download/cross_correlation_plot/ENCFF482CBGENCFF172SIG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB596HYQ michael-snyder:L-3057 "ENCFF482CBG,ENCFF172SIG" HiSeq 4000 2016-10-27T22:16:24.847637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08byq00369GJ6xQfbB7F62K ENCSR831EIW https://www.encodeproject.org/experiments/ENCSR831EIW transcription factor FOXM1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF769AMJ https://www.encodeproject.org/files/ENCFF769AMJ/@@download/ENCFF769AMJ.bam ENCFF766ISM https://www.encodeproject.org/files/ENCFF766ISM/@@download/ENCFF766ISM.bam 80.6 M 0 78.5 M 0.974 PE 100 100 native 34.4 M 0.0 M 29.1 M 0.721 0.85 0.84 6.32 175 1.07 7.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9b27b48-11d9-4f56-99ba-9dbe23263607/@@download/cross_correlation_plot/ENCFF483BRWENCFF238UVA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB600OVW michael-snyder:L-3370 "ENCFF238UVA,ENCFF483BRW" HiSeq 4000 2017-04-09T00:00:27.655256+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z04600369KfBkKFP5XjKB8 ENCSR831EIW https://www.encodeproject.org/experiments/ENCSR831EIW transcription factor FOXM1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF847XON https://www.encodeproject.org/files/ENCFF847XON/@@download/ENCFF847XON.bam ENCFF852JUK https://www.encodeproject.org/files/ENCFF852JUK/@@download/ENCFF852JUK.bam 104.0 M 0 101.7 M 0.978 PE 100 100 native 45.1 M 0.0 M 38.2 M 0.735 0.85 0.85 6.37 150 1.07 2.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/65887b3b-9009-4ea0-bfd9-a14279edb03f/@@download/cross_correlation_plot/ENCFF256RPRENCFF870RNA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB679RXW michael-snyder:L-3371 "ENCFF256RPR,ENCFF870RNA" HiSeq 4000 2017-04-09T00:01:41.614841+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z04B0036919VFJJkQGpqFZ ENCSR522LDJ https://www.encodeproject.org/experiments/ENCSR522LDJ "RNA binding protein,transcription factor" HDGF-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF302VJW https://www.encodeproject.org/files/ENCFF302VJW/@@download/ENCFF302VJW.bam ENCFF875CHB https://www.encodeproject.org/files/ENCFF875CHB/@@download/ENCFF875CHB.bam 59.2 M 0 57.7 M 0.973 PE 100 100 native 25.3 M 0.0 M 23.8 M 0.804 0.94 0.94 16.63 215 1.08 7.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/be407878-8ce9-4c13-8b46-ed454998f475/@@download/cross_correlation_plot/ENCFF452DQUENCFF359OBA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB521RRA michael-snyder:L-3355 "ENCFF359OBA,ENCFF452DQU" HiSeq 4000 2017-04-08T23:59:04.989811+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05F803695VV512F0xZY3Q ENCSR522LDJ https://www.encodeproject.org/experiments/ENCSR522LDJ "RNA binding protein,transcription factor" HDGF-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF594ICG https://www.encodeproject.org/files/ENCFF594ICG/@@download/ENCFF594ICG.bam ENCFF262LCF https://www.encodeproject.org/files/ENCFF262LCF/@@download/ENCFF262LCF.bam 103.6 M 0 100.8 M 0.973 PE 100 100 native 44.4 M 0.0 M 41.0 M 0.791 0.92 0.92 12.49 190 1.05 5.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1362e0b-5eab-4f23-a1dd-6672e1f090ec/@@download/cross_correlation_plot/ENCFF060IWYENCFF006IUL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB264UCK michael-snyder:L-3356 "ENCFF060IWY,ENCFF006IUL" HiSeq 4000 2017-04-09T00:02:24.728263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05PQ03697FZkz103qkPKy ENCSR862PNL https://www.encodeproject.org/experiments/ENCSR862PNL transcription factor L3MBTL2-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF763WJE https://www.encodeproject.org/files/ENCFF763WJE/@@download/ENCFF763WJE.bam ENCFF219YXK https://www.encodeproject.org/files/ENCFF219YXK/@@download/ENCFF219YXK.bam 101.7 M 0 98.9 M 0.972 PE 100 100 native 43.3 M 0.0 M 35.5 M 0.697 0.82 0.82 5.32 225 1.14 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/e872c616-f3b0-47c7-bb1d-3a797261ce8d/@@download/cross_correlation_plot/ENCFF089HEDENCFF841ZWA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB534WWE michael-snyder:L-3048 "ENCFF841ZWA,ENCFF089HED" HiSeq 4000 2016-10-27T22:16:07.281046+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08by9Q03694q32PPxBJ6b3Y ENCSR862PNL https://www.encodeproject.org/experiments/ENCSR862PNL transcription factor L3MBTL2-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF517RCT https://www.encodeproject.org/files/ENCFF517RCT/@@download/ENCFF517RCT.bam ENCFF315CKY https://www.encodeproject.org/files/ENCFF315CKY/@@download/ENCFF315CKY.bam 124.3 M 0 121.1 M 0.975 PE 100 100 native 53.4 M 0.0 M 45.4 M 0.731 0.85 0.85 6.55 220 1.15 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/a08852bf-1dce-417b-b65d-8bcde023539c/@@download/cross_correlation_plot/ENCFF035MMHENCFF800CLX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB378WBH michael-snyder:L-3049 "ENCFF800CLX,ENCFF035MMH" HiSeq 4000 2016-10-27T22:18:12.768654+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08byJ00369GJ6xQfbB7F621 ENCSR240XWM https://www.encodeproject.org/experiments/ENCSR240XWM transcription factor LEF1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF457VMK https://www.encodeproject.org/files/ENCFF457VMK/@@download/ENCFF457VMK.bam ENCFF308AZK https://www.encodeproject.org/files/ENCFF308AZK/@@download/ENCFF308AZK.bam 74.1 M 0 66.7 M 0.900 PE 100 100 native 28.9 M 0.0 M 25.3 M 0.684 0.88 0.88 8.09 195 1.07 6.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7d9c038-4427-4806-80e2-667ae5ada369/@@download/cross_correlation_plot/ENCFF011PMDENCFF402LAV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB037WNN michael-snyder:L-3359 "ENCFF011PMD,ENCFF402LAV" HiSeq 4000 2017-04-09T00:00:03.513942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05Z00369K0f522FPBpgbj ENCSR240XWM https://www.encodeproject.org/experiments/ENCSR240XWM transcription factor LEF1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF889PAN https://www.encodeproject.org/files/ENCFF889PAN/@@download/ENCFF889PAN.bam ENCFF532EAY https://www.encodeproject.org/files/ENCFF532EAY/@@download/ENCFF532EAY.bam 143.6 M 0 136.2 M 0.948 PE 100 100 native 59.8 M 0.0 M 52.9 M 0.736 0.88 0.88 8.46 195 1.04 9.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba3d143d-e927-49ff-9281-df2a38b97c42/@@download/cross_correlation_plot/ENCFF192OJPENCFF291SHJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB444BYJ michael-snyder:L-3361 "ENCFF192OJP,ENCFF291SHJ" HiSeq 4000 2017-04-09T00:05:35.717113+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05jQ03691VzFp4vyz2XQZ ENCSR233FAG https://www.encodeproject.org/experiments/ENCSR233FAG transcription factor PKNOX1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF995ZRC https://www.encodeproject.org/files/ENCFF995ZRC/@@download/ENCFF995ZRC.bam ENCFF125IYY https://www.encodeproject.org/files/ENCFF125IYY/@@download/ENCFF125IYY.bam 85.6 M 0 83.0 M 0.970 PE 100 100 native 35.5 M 0.0 M 33.9 M 0.791 0.95 0.95 21.89 200 1.58 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/56ce088b-9ee0-4780-9cfa-05295236c20a/@@download/cross_correlation_plot/ENCFF766EXHENCFF145TGH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB697AXU michael-snyder:L-3024 "ENCFF766EXH,ENCFF145TGH" HiSeq 2000 2016-10-27T22:35:00.386431+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfJQ03695YX1xgJBKFkXZ ENCSR233FAG https://www.encodeproject.org/experiments/ENCSR233FAG transcription factor PKNOX1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF364TGY https://www.encodeproject.org/files/ENCFF364TGY/@@download/ENCFF364TGY.bam ENCFF934PHO https://www.encodeproject.org/files/ENCFF934PHO/@@download/ENCFF934PHO.bam 101.1 M 0 98.5 M 0.974 PE 100 100 native 42.2 M 0.0 M 40.6 M 0.802 0.96 0.96 26.55 200 1.59 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe71e0fd-655c-4e80-b684-9c2e74ebf7c1/@@download/cross_correlation_plot/ENCFF859KHKENCFF341BBR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB837VPN michael-snyder:L-3025 "ENCFF341BBR,ENCFF859KHK" HiSeq 2000 2016-10-27T22:42:14.766320+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfQj0369PQyG3V5B4502p ENCSR906PEI https://www.encodeproject.org/experiments/ENCSR906PEI transcription factor SP1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF065ZXS https://www.encodeproject.org/files/ENCFF065ZXS/@@download/ENCFF065ZXS.bam ENCFF845HUA https://www.encodeproject.org/files/ENCFF845HUA/@@download/ENCFF845HUA.bam 84.9 M 0 82.6 M 0.974 PE 100 100 native 36.4 M 0.0 M 33.6 M 0.792 0.92 0.92 13.02 190 1.05 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca52bf3a-39d9-4aff-8a61-878deb2591ef/@@download/cross_correlation_plot/ENCFF601UZAENCFF895TXD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB132SEO michael-snyder:L-3036 "ENCFF601UZA,ENCFF895TXD" HiSeq 2000 2016-10-27T22:22:00.500911+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bzJj0369GJ6xQfbB7F638 ENCSR906PEI https://www.encodeproject.org/experiments/ENCSR906PEI transcription factor SP1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF144OSY https://www.encodeproject.org/files/ENCFF144OSY/@@download/ENCFF144OSY.bam ENCFF720UHQ https://www.encodeproject.org/files/ENCFF720UHQ/@@download/ENCFF720UHQ.bam 79.9 M 0 77.7 M 0.973 PE 100 100 native 33.9 M 0.0 M 31.7 M 0.795 0.94 0.94 15.57 205 1.05 4.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/c69846ed-87eb-47ec-843b-c78faa5ed28a/@@download/cross_correlation_plot/ENCFF955QVTENCFF653QNP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB082WSX michael-snyder:L-3038 "ENCFF653QNP,ENCFF955QVT" HiSeq 2000 2016-10-27T22:19:49.037548+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bzY00369GJ6xQfbB7F63j ENCSR090ZDO https://www.encodeproject.org/experiments/ENCSR090ZDO "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF835IGH https://www.encodeproject.org/files/ENCFF835IGH/@@download/ENCFF835IGH.bam ENCFF826MFW https://www.encodeproject.org/files/ENCFF826MFW/@@download/ENCFF826MFW.bam 106.8 M 0 102.8 M 0.963 PE 100 100 native 44.3 M 0.0 M 40.6 M 0.760 0.92 0.92 11.93 225 1.04 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/3464ea9d-761c-4485-b53c-6e745ebde365/@@download/cross_correlation_plot/ENCFF097JJWENCFF024XVW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB924BZQ michael-snyder:L-3052 "ENCFF097JJW,ENCFF024XVW" HiSeq 4000 2016-10-27T22:35:47.094819+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bX100369PQyG3V5B45006 ENCSR090ZDO https://www.encodeproject.org/experiments/ENCSR090ZDO "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF038DYY https://www.encodeproject.org/files/ENCFF038DYY/@@download/ENCFF038DYY.bam ENCFF913WBO https://www.encodeproject.org/files/ENCFF913WBO/@@download/ENCFF913WBO.bam 106.2 M 0 102.9 M 0.969 PE 100 100 native 44.8 M 0.0 M 39.9 M 0.752 0.89 0.89 9.03 240 1.03 4.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/49ba3c18-6042-4279-869b-2ccfcb90f880/@@download/cross_correlation_plot/ENCFF674QTVENCFF478YYA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB013ZSX michael-snyder:L-3053 "ENCFF478YYA,ENCFF674QTV" HiSeq 4000 2016-10-27T22:35:57.638421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bY3803695YX1xgJBKFkVb ENCSR753GIA https://www.encodeproject.org/experiments/ENCSR753GIA "RNA binding protein,transcription factor" TARDBP-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF592NOJ https://www.encodeproject.org/files/ENCFF592NOJ/@@download/ENCFF592NOJ.bam ENCFF092SQY https://www.encodeproject.org/files/ENCFF092SQY/@@download/ENCFF092SQY.bam 86.2 M 0 84.3 M 0.978 PE 100 100 native 37.0 M 0.0 M 35.7 M 0.827 0.97 0.97 29.06 195 1.05 3.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/67375b28-bf46-465e-806f-50feed050e84/@@download/cross_correlation_plot/ENCFF015SCZENCFF580QBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB010JHQ michael-snyder:L-3037 "ENCFF580QBV,ENCFF015SCZ" HiSeq 2000 2016-10-27T22:29:00.104682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvP003694q32PPxBJ6b1z ENCSR753GIA https://www.encodeproject.org/experiments/ENCSR753GIA "RNA binding protein,transcription factor" TARDBP-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF158YRG https://www.encodeproject.org/files/ENCFF158YRG/@@download/ENCFF158YRG.bam ENCFF943PTK https://www.encodeproject.org/files/ENCFF943PTK/@@download/ENCFF943PTK.bam 61.5 M 0 59.9 M 0.973 PE 100 100 native 26.1 M 0.0 M 25.1 M 0.816 0.96 0.96 26.84 210 1.06 4.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f451f03-6199-47c2-b0bd-f70d8beedcd5/@@download/cross_correlation_plot/ENCFF514DNWENCFF290TCQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB370BLT michael-snyder:L-3039 "ENCFF514DNW,ENCFF290TCQ" HiSeq 2000 2016-10-27T22:25:04.912962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvX80369PQyG3V5B4505v ENCSR218GSN https://www.encodeproject.org/experiments/ENCSR218GSN transcription factor ZFX-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF136VHO https://www.encodeproject.org/files/ENCFF136VHO/@@download/ENCFF136VHO.bam ENCFF703UOS https://www.encodeproject.org/files/ENCFF703UOS/@@download/ENCFF703UOS.bam 131.8 M 0 129.1 M 0.979 PE 100 100 native 55.0 M 0.0 M 52.8 M 0.802 0.96 0.96 24.58 315 1.17 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/17585ebd-1a82-4aca-bb7d-8d4fd9aede0d/@@download/cross_correlation_plot/ENCFF664IIEENCFF292UBY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB463YWV michael-snyder:L-3091 "ENCFF292UBY,ENCFF664IIE" HiSeq 2000 2017-02-04T22:19:02.613340+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BX2fQ0369JpqfkG09Vg4pv ENCSR218GSN https://www.encodeproject.org/experiments/ENCSR218GSN transcription factor ZFX-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF798AWZ https://www.encodeproject.org/files/ENCFF798AWZ/@@download/ENCFF798AWZ.bam ENCFF886OBS https://www.encodeproject.org/files/ENCFF886OBS/@@download/ENCFF886OBS.bam 104.1 M 0 101.4 M 0.974 PE 100 100 native 43.1 M 0.0 M 40.6 M 0.780 0.94 0.94 16.51 345 1.12 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/3cb59cf6-a1f0-4998-8c3d-228b7b409334/@@download/cross_correlation_plot/ENCFF340SRUENCFF108LDP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB413YGP michael-snyder:L-3093 "ENCFF340SRU,ENCFF108LDP" HiSeq 2000 2017-02-04T22:15:56.296194+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BX2xQ03698Y174Fz56XY9X ENCSR882ICT https://www.encodeproject.org/experiments/ENCSR882ICT transcription factor ZNF384-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF826JBZ https://www.encodeproject.org/files/ENCFF826JBZ/@@download/ENCFF826JBZ.bam ENCFF532KUU https://www.encodeproject.org/files/ENCFF532KUU/@@download/ENCFF532KUU.bam 95.4 M 0 92.4 M 0.968 PE 100 100 native 38.3 M 0.0 M 37.7 M 0.789 0.98 0.98 60.91 200 1.08 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/5efa6fc3-2084-4d7b-8727-939ae4b36958/@@download/cross_correlation_plot/ENCFF237IMGENCFF571ZGV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB055YTL michael-snyder:L-3040 "ENCFF237IMG,ENCFF571ZGV" HiSeq 2000 2016-10-27T22:27:45.680644+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08byyj0369GJ6xQfbB7F62f ENCSR882ICT https://www.encodeproject.org/experiments/ENCSR882ICT transcription factor ZNF384-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF412ASO https://www.encodeproject.org/files/ENCFF412ASO/@@download/ENCFF412ASO.bam ENCFF181AMB https://www.encodeproject.org/files/ENCFF181AMB/@@download/ENCFF181AMB.bam 104.7 M 0 101.2 M 0.966 PE 100 100 native 41.6 M 0.0 M 40.3 M 0.769 0.97 0.97 31.50 205 1.07 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/571755e4-6f42-4e1c-ab0c-a593feb82c0e/@@download/cross_correlation_plot/ENCFF871PJGENCFF490PRK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB408LRK michael-snyder:L-3041 "ENCFF490PRK,ENCFF871PJG" HiSeq 2000 2016-10-27T22:31:42.836067+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bz2Q0369GJ6xQfbB7F62y ENCSR000EDB https://www.encodeproject.org/experiments/ENCSR000EDB transcription factor BRCA1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDA https://www.encodeproject.org/experiments/ENCSR000EDA transcription factor CEBPB-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECI https://www.encodeproject.org/experiments/ENCSR000ECI transcription factor ELK1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR680OFU https://www.encodeproject.org/experiments/ENCSR680OFU transcription factor EP300-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF278VUO https://www.encodeproject.org/files/ENCFF278VUO/@@download/ENCFF278VUO.bam ENCFF067OJF https://www.encodeproject.org/files/ENCFF067OJF/@@download/ENCFF067OJF.bam 28.2 M 0 27.9 M 0.987 SE 36 36 native 0.0 M 21.9 M 20.7 M 0.734 0.95 0.95 20.12 135 1.19 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc1abbf4-7ae9-4251-bf1a-87efe1803e5d/@@download/cross_correlation_plot/ENCFF002EDE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB420IME michael-snyder:P300_sc-585_HeLa-S3_Rep1 ENCFF002EDE Illumina Genome Analyzer IIx 2016-10-29T18:00:18.658200+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B27Bj0jv1zQyG3V5B45f2Z ENCSR680OFU https://www.encodeproject.org/experiments/ENCSR680OFU transcription factor EP300-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF946EJI https://www.encodeproject.org/files/ENCFF946EJI/@@download/ENCFF946EJI.bam ENCFF920QFM https://www.encodeproject.org/files/ENCFF920QFM/@@download/ENCFF920QFM.bam 25.6 M 0 25.1 M 0.980 SE 36 36 native 0.0 M 18.6 M 17.9 M 0.698 0.96 0.96 28.32 110 1.07 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/9652d94e-ba4f-4145-8d9b-9a4027de8317/@@download/cross_correlation_plot/ENCFF002EDG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB487WKY michael-snyder:P300_sc-585_HeLa-S3_Rep2 ENCFF002EDG Illumina Genome Analyzer IIx 2016-10-29T18:00:03.384129+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B27Jj0jv1b140QP5B2xKj2 ENCSR000ECH https://www.encodeproject.org/experiments/ENCSR000ECH transcription factor HCFC1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDG https://www.encodeproject.org/experiments/ENCSR000EDG transcription factor JUN-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EDH https://www.encodeproject.org/experiments/ENCSR000EDH transcription factor JUND-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000ECR https://www.encodeproject.org/experiments/ENCSR000ECR transcription factor KAT2A-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECN https://www.encodeproject.org/experiments/ENCSR000ECN transcription factor MAX-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECU https://www.encodeproject.org/experiments/ENCSR000ECU transcription factor MXI1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR707IUN https://www.encodeproject.org/experiments/ENCSR707IUN transcription factor NFE2L2-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF686TXK https://www.encodeproject.org/files/ENCFF686TXK/@@download/ENCFF686TXK.bam ENCFF752BNX https://www.encodeproject.org/files/ENCFF752BNX/@@download/ENCFF752BNX.bam 25.4 M 0 24.8 M 0.977 SE 36 36 native 0.0 M 18.6 M 17.9 M 0.704 0.97 0.97 29.47 110 1.09 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb8f9130-9680-4bcb-aa7a-b3c0f7bf5b0d/@@download/cross_correlation_plot/ENCFF002EVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB718DTE michael-snyder:NRF2_sc-13032_HeLa-S3_Rep1 ENCFF002EVN Illumina Genome Analyzer IIx 2016-10-09T17:08:40.678936+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k400jv1vY92b0GYjVFV7 ENCSR707IUN https://www.encodeproject.org/experiments/ENCSR707IUN transcription factor NFE2L2-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF068LXE https://www.encodeproject.org/files/ENCFF068LXE/@@download/ENCFF068LXE.bam ENCFF056UJQ https://www.encodeproject.org/files/ENCFF056UJQ/@@download/ENCFF056UJQ.bam 30.8 M 0 30.3 M 0.985 SE 36 36 native 0.0 M 22.3 M 21.9 M 0.711 0.98 0.98 62.29 110 1.06 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/70f43fcb-56e7-4e1d-b1ef-f4452c489d04/@@download/cross_correlation_plot/ENCFF002EVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB850SFR michael-snyder:NRF2_sc-13032_HeLa-S3_Rep2 ENCFF002EVQ Illumina Genome Analyzer IIx 2016-10-09T17:07:56.973538+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k5Q0jv1g5yGjfvVx0KZy ENCSR000EDP https://www.encodeproject.org/experiments/ENCSR000EDP transcription factor ARID3A-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF192DDJ https://www.encodeproject.org/files/ENCFF192DDJ/@@download/ENCFF192DDJ.bam ENCFF487RHK https://www.encodeproject.org/files/ENCFF487RHK/@@download/ENCFF487RHK.bam 23.9 M 0 23.7 M 0.990 SE 36 36 native 0.0 M 18.4 M 17.9 M 0.749 0.97 0.97 39.11 115 1.08 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f9ef58d-6943-4ad0-8256-deaccbf55d38/@@download/cross_correlation_plot/ENCFF000XOS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJV ENCFF000XOS Illumina Genome Analyzer 2016-12-10T21:00:41.920032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1632v803692f1gp513PxgG7 ENCSR000EDP https://www.encodeproject.org/experiments/ENCSR000EDP transcription factor ARID3A-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF065BJO https://www.encodeproject.org/files/ENCFF065BJO/@@download/ENCFF065BJO.bam ENCFF535LHT https://www.encodeproject.org/files/ENCFF535LHT/@@download/ENCFF535LHT.bam 23.8 M 0 23.4 M 0.981 SE 36 36 native 0.0 M 18.0 M 17.5 M 0.734 0.98 0.98 43.97 115 1.13 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/84738f50-fce4-4c81-a87d-c29f78795cc5/@@download/cross_correlation_plot/ENCFF000XOU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJW ENCFF000XOU Illumina Genome Analyzer 2016-12-10T21:00:02.633303+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16331j0369KbxV61z4GFv7K ENCSR029IBC https://www.encodeproject.org/experiments/ENCSR029IBC transcription factor ARNT-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF476CCE https://www.encodeproject.org/files/ENCFF476CCE/@@download/ENCFF476CCE.bam ENCFF469CIQ https://www.encodeproject.org/files/ENCFF469CIQ/@@download/ENCFF469CIQ.bam 66.7 M 0 64.7 M 0.970 PE 100 100 native 27.7 M 0.0 M 27.1 M 0.813 0.98 0.98 47.17 205 1.06 5.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/399b79d6-9520-47cf-9551-228e43525caf/@@download/cross_correlation_plot/ENCFF481UNMENCFF110AZC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB620BZF michael-snyder:L-1906 "ENCFF110AZC,ENCFF481UNM" HiSeq 2000 2017-01-28T05:05:32.279796+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k2Yj03690QKBV65qQ3vFb ENCSR029IBC https://www.encodeproject.org/experiments/ENCSR029IBC transcription factor ARNT-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF949KJV https://www.encodeproject.org/files/ENCFF949KJV/@@download/ENCFF949KJV.bam ENCFF464YVO https://www.encodeproject.org/files/ENCFF464YVO/@@download/ENCFF464YVO.bam 84.6 M 0 82.4 M 0.974 PE 100 100 native 35.6 M 0.0 M 35.0 M 0.828 0.98 0.98 62.85 200 1.04 3.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/32111964-79fa-4683-a0b2-e4184eb13d8b/@@download/cross_correlation_plot/ENCFF906JOBENCFF992YHZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB845RQW michael-snyder:L-1907 "ENCFF992YHZ,ENCFF906JOB" HiSeq 2000 2017-01-28T05:08:40.284621+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k2k803695Q259664kQvy8 ENCSR744PJB https://www.encodeproject.org/experiments/ENCSR744PJB transcription factor ASH1L-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF664OEU https://www.encodeproject.org/files/ENCFF664OEU/@@download/ENCFF664OEU.bam ENCFF889DVM https://www.encodeproject.org/files/ENCFF889DVM/@@download/ENCFF889DVM.bam 71.2 M 0 68.5 M 0.962 PE 100 100 native 28.7 M 0.0 M 28.4 M 0.798 0.99 0.99 99.77 200 1.05 3.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/67b187bd-045a-4b92-bc29-06cf90fd85a5/@@download/cross_correlation_plot/ENCFF702ZLXENCFF440TYV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB466KRP michael-snyder:L-2290 "ENCFF440TYV,ENCFF702ZLX" HiSeq 2000 2016-10-09T17:00:54.918959+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J480jv1vY92b0GYjVG2f ENCSR744PJB https://www.encodeproject.org/experiments/ENCSR744PJB transcription factor ASH1L-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF697GOS https://www.encodeproject.org/files/ENCFF697GOS/@@download/ENCFF697GOS.bam ENCFF251PGZ https://www.encodeproject.org/files/ENCFF251PGZ/@@download/ENCFF251PGZ.bam 81.5 M 0 78.4 M 0.962 PE 100 100 native 32.8 M 0.0 M 32.6 M 0.799 0.99 0.99 154.83 210 1.05 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd47a331-8e49-4017-8452-4aae6ac55227/@@download/cross_correlation_plot/ENCFF075JRPENCFF065CDB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB105RBD michael-snyder:L-2291 "ENCFF065CDB,ENCFF075JRP" HiSeq 2000 2016-10-09T17:02:29.516572+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J5j0jv1xPyfX78Yz4j7g ENCSR047BUZ https://www.encodeproject.org/experiments/ENCSR047BUZ transcription factor ATF2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF091QWO https://www.encodeproject.org/files/ENCFF091QWO/@@download/ENCFF091QWO.bam ENCFF254MCO https://www.encodeproject.org/files/ENCFF254MCO/@@download/ENCFF254MCO.bam 55.9 M 0 54.6 M 0.976 PE 100 100 native 23.8 M 0.0 M 22.6 M 0.809 0.95 0.95 20.40 210 1.80 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/30e283e0-8b43-471f-8784-e9d62da7930f/@@download/cross_correlation_plot/ENCFF843QDRENCFF929RZN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB668UTD michael-snyder:L-1912 "ENCFF929RZN,ENCFF843QDR" HiSeq 2000 2017-01-25T23:37:47.427890+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9KQ0369192FJ8V9vk3vB ENCSR047BUZ https://www.encodeproject.org/experiments/ENCSR047BUZ transcription factor ATF2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF694VBR https://www.encodeproject.org/files/ENCFF694VBR/@@download/ENCFF694VBR.bam ENCFF213BPX https://www.encodeproject.org/files/ENCFF213BPX/@@download/ENCFF213BPX.bam 67.0 M 0 64.9 M 0.970 PE 100 100 native 27.9 M 0.0 M 26.8 M 0.802 0.96 0.96 25.80 205 1.14 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/890eeaa9-b9ce-47f6-bee5-d34f67f929b8/@@download/cross_correlation_plot/ENCFF588IKSENCFF461VFX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB885QIC michael-snyder:L-1913 "ENCFF588IKS,ENCFF461VFX" HiSeq 2000 2017-01-26T00:56:23.446510+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBXQ0369F2pz096jxpgBV ENCSR536MGS https://www.encodeproject.org/experiments/ENCSR536MGS transcription factor ATF4-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR859JGF https://www.encodeproject.org/experiments/ENCSR859JGF transcription factor ATM-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF044TWJ https://www.encodeproject.org/files/ENCFF044TWJ/@@download/ENCFF044TWJ.bam ENCFF943LYC https://www.encodeproject.org/files/ENCFF943LYC/@@download/ENCFF943LYC.bam 71.4 M 0 69.0 M 0.966 PE 100 100 native 29.2 M 0.0 M 28.9 M 0.809 0.99 0.99 111.88 215 1.05 4.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d13b5e8-bc8d-48a2-a724-5793a03a8fb0/@@download/cross_correlation_plot/ENCFF655ZKUENCFF998ZXC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB705TVR michael-snyder:L-1822 "ENCFF655ZKU,ENCFF998ZXC" HiSeq 2000 2016-10-09T17:12:07.189765+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kz00jv1f60PxyZ9JGKqF ENCSR859JGF https://www.encodeproject.org/experiments/ENCSR859JGF transcription factor ATM-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF844MJH https://www.encodeproject.org/files/ENCFF844MJH/@@download/ENCFF844MJH.bam ENCFF988FYL https://www.encodeproject.org/files/ENCFF988FYL/@@download/ENCFF988FYL.bam 61.8 M 0 59.9 M 0.970 PE 100 100 native 25.6 M 0.0 M 22.8 M 0.737 0.89 0.89 8.73 205 1.06 4.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/77e448c4-4fb0-46f7-aee5-b7fe3f907d29/@@download/cross_correlation_plot/ENCFF700HESENCFF766JQJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB787CUA michael-snyder:L-1823 "ENCFF700HES,ENCFF766JQJ" HiSeq 2000 2016-10-09T17:11:10.538115+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3p0Q0jv1XvFGkBjjfjPzQ ENCSR699TNT https://www.encodeproject.org/experiments/ENCSR699TNT transcription factor BACH1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF731LUG https://www.encodeproject.org/files/ENCFF731LUG/@@download/ENCFF731LUG.bam ENCFF273JRL https://www.encodeproject.org/files/ENCFF273JRL/@@download/ENCFF273JRL.bam 31.3 M 0 31.0 M 0.990 SE 36 36 native 0.0 M 24.4 M 22.6 M 0.724 0.94 0.94 16.05 130 1.07 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d7bf0b6-a2a7-4e18-a0e5-43e5d6054b3d/@@download/cross_correlation_plot/ENCFF002EDR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB317YQT michael-snyder:Bach1_sc-14700_HepG2_Rep1 ENCFF002EDR Illumina Genome Analyzer IIx 2016-10-29T18:00:51.078682+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B25xQ0jv1jJBzYyJKPbJgZ ENCSR699TNT https://www.encodeproject.org/experiments/ENCSR699TNT transcription factor BACH1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF265OAN https://www.encodeproject.org/files/ENCFF265OAN/@@download/ENCFF265OAN.bam ENCFF476CKC https://www.encodeproject.org/files/ENCFF476CKC/@@download/ENCFF476CKC.bam 26.5 M 0 26.0 M 0.985 SE 36 36 native 0.0 M 19.5 M 18.9 M 0.716 0.98 0.98 47.39 120 1.04 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba9764cf-afb8-4cd2-ae6b-61847604adb5/@@download/cross_correlation_plot/ENCFF002EDO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB141GKB michael-snyder:Bach1_sc-14700_HepG2_Rep2 ENCFF002EDO Illumina Genome Analyzer IIx 2016-10-29T18:00:21.806427+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B26080jv1Y4294qbK859kb ENCSR015TKV https://www.encodeproject.org/experiments/ENCSR015TKV "RNA binding protein,transcription factor" BCLAF1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF207SAV https://www.encodeproject.org/files/ENCFF207SAV/@@download/ENCFF207SAV.bam ENCFF469EUD https://www.encodeproject.org/files/ENCFF469EUD/@@download/ENCFF469EUD.bam 88.6 M 0 85.2 M 0.961 PE 100 100 native 36.3 M 0.0 M 32.9 M 0.743 0.91 0.91 10.49 140 1.05 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/65da6849-88f4-4f87-8a22-aea5fdbe045c/@@download/cross_correlation_plot/ENCFF774IAMENCFF090URG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB818GYL michael-snyder:L-3366 "ENCFF774IAM,ENCFF090URG" HiSeq 4000 2017-04-19T10:55:21.749594+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q81k003698VgJZ4Fy12GzB ENCSR015TKV https://www.encodeproject.org/experiments/ENCSR015TKV "RNA binding protein,transcription factor" BCLAF1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF939EOP https://www.encodeproject.org/files/ENCFF939EOP/@@download/ENCFF939EOP.bam ENCFF731ADB https://www.encodeproject.org/files/ENCFF731ADB/@@download/ENCFF731ADB.bam 96.8 M 0 92.6 M 0.956 PE 100 100 native 39.4 M 0.0 M 34.5 M 0.712 0.87 0.87 7.83 140 1.05 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/61d029e1-fd2e-465a-82cb-f628e9755ea6/@@download/cross_correlation_plot/ENCFF383GYIENCFF696OAD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB346QBW michael-snyder:L-3367 "ENCFF383GYI,ENCFF696OAD" HiSeq 4000 2017-04-19T10:55:34.388032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q826Q03692362PBZ95x0B6 ENCSR000EDY https://www.encodeproject.org/experiments/ENCSR000EDY transcription factor BRCA1-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF134KPW https://www.encodeproject.org/files/ENCFF134KPW/@@download/ENCFF134KPW.bam ENCFF230XGL https://www.encodeproject.org/files/ENCFF230XGL/@@download/ENCFF230XGL.bam 20.3 M 0 18.8 M 0.927 SE 36 36 native 0.0 M 13.9 M 13.7 M 0.676 0.99 0.99 85.06 110 1.04 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/e600d5a3-dc0d-49d6-813d-7e18dfc949a6/@@download/cross_correlation_plot/ENCFF000XPL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKE ENCFF000XPL Illumina Genome Analyzer 2016-12-10T22:20:14.454430+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Q600369PJ8BP63qf1FbJ ENCSR000EDY https://www.encodeproject.org/experiments/ENCSR000EDY transcription factor BRCA1-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF699JHR https://www.encodeproject.org/files/ENCFF699JHR/@@download/ENCFF699JHR.bam ENCFF381UHY https://www.encodeproject.org/files/ENCFF381UHY/@@download/ENCFF381UHY.bam 31.7 M 0 27.8 M 0.877 SE 36 36 native 0.0 M 20.6 M 20.3 M 0.640 0.99 0.99 85.69 115 1.03 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/875a52ab-7fee-41d3-ae82-b3106d6bbdfb/@@download/cross_correlation_plot/ENCFF000XPS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUS ENCFF000XPS Illumina Genome Analyzer 2016-12-11T00:06:27.091890+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163QBQ03699Z3Y8493qbpv6 ENCSR000EEE https://www.encodeproject.org/experiments/ENCSR000EEE transcription factor CEBPB-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF677PSB https://www.encodeproject.org/files/ENCFF677PSB/@@download/ENCFF677PSB.bam ENCFF270RFR https://www.encodeproject.org/files/ENCFF270RFR/@@download/ENCFF270RFR.bam 18.9 M 0 17.7 M 0.939 SE 36 36 native 0.0 M 13.2 M 12.4 M 0.654 0.94 0.95 25.11 100 2.59 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/294b8164-ffad-454f-9554-c6fea77af74f/@@download/cross_correlation_plot/ENCFF000XQM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVK ENCFF000XQM Illumina Genome Analyzer 2016-12-12T17:20:47.723941+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1620b803692pJ09J76g5fZ7 ENCSR000EEE https://www.encodeproject.org/experiments/ENCSR000EEE transcription factor CEBPB-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF514FUP https://www.encodeproject.org/files/ENCFF514FUP/@@download/ENCFF514FUP.bam ENCFF347QQH https://www.encodeproject.org/files/ENCFF347QQH/@@download/ENCFF347QQH.bam 29.0 M 0 27.1 M 0.935 SE 36 36 native 0.0 M 20.3 M 20.0 M 0.690 0.98 0.98 69.51 100 1.13 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5ef6d94-9d8c-4dd0-af78-e64547b60a94/@@download/cross_correlation_plot/ENCFF000XQN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASS ENCFF000XQN Illumina Genome Analyzer 2016-12-12T17:21:35.276942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1620kQ03692pJ09J76g5fZQ ENCSR000EEX https://www.encodeproject.org/experiments/ENCSR000EEX transcription factor CEBPB-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EED https://www.encodeproject.org/experiments/ENCSR000EED "RNA binding protein,transcription factor" CHD2-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF358QPW https://www.encodeproject.org/files/ENCFF358QPW/@@download/ENCFF358QPW.bam ENCFF528KZI https://www.encodeproject.org/files/ENCFF528KZI/@@download/ENCFF528KZI.bam 21.5 M 0 20.1 M 0.934 SE 36 36 native 0.0 M 14.9 M 14.5 M 0.677 0.98 0.99 110.74 110 1.18 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/94b2e50a-f574-4319-826f-a25b6879e856/@@download/cross_correlation_plot/ENCFF000XQP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARG ENCFF000XQP Illumina Genome Analyzer 2016-12-10T22:54:51.536382+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Pv003697vfpg2qKbyZGK ENCSR000EED https://www.encodeproject.org/experiments/ENCSR000EED "RNA binding protein,transcription factor" CHD2-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF291LSV https://www.encodeproject.org/files/ENCFF291LSV/@@download/ENCFF291LSV.bam ENCFF175XZF https://www.encodeproject.org/files/ENCFF175XZF/@@download/ENCFF175XZF.bam 27.4 M 0 25.5 M 0.929 SE 36 36 native 0.0 M 19.0 M 18.2 M 0.664 0.96 0.98 64.77 125 1.18 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0a79db8-faac-417c-8632-2f53d21db2e6/@@download/cross_correlation_plot/ENCFF000XQQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADO ENCFF000XQQ Illumina Genome Analyzer 2016-12-10T23:14:53.838312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Q0Q03699K237J9jY9kZK ENCSR112ALD https://www.encodeproject.org/experiments/ENCSR112ALD transcription factor CREB1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF845JDR https://www.encodeproject.org/files/ENCFF845JDR/@@download/ENCFF845JDR.bam ENCFF788YYM https://www.encodeproject.org/files/ENCFF788YYM/@@download/ENCFF788YYM.bam 81.3 M 0 76.8 M 0.945 PE 100 100 native 30.3 M 0.0 M 30.0 M 0.738 0.99 0.99 97.21 210 2.57 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f692a16-7945-4b47-ba4e-e986618a09b6/@@download/cross_correlation_plot/ENCFF126LSCENCFF553QEQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB484WCC michael-snyder:L-2613 "ENCFF126LSC,ENCFF553QEQ" HiSeq 2000 2016-08-30T18:03:21.698414+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ29j0369BQ7VQPxBqP1P6 ENCSR112ALD https://www.encodeproject.org/experiments/ENCSR112ALD transcription factor CREB1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF011HOS https://www.encodeproject.org/files/ENCFF011HOS/@@download/ENCFF011HOS.bam ENCFF319GEZ https://www.encodeproject.org/files/ENCFF319GEZ/@@download/ENCFF319GEZ.bam 88.5 M 0 84.7 M 0.957 PE 100 100 native 34.9 M 0.0 M 34.6 M 0.783 0.99 0.99 124.70 205 1.53 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e7d8f6d-7b7c-4b3e-a9d0-0fde7124c77e/@@download/cross_correlation_plot/ENCFF199RYEENCFF149OFF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB955KHX michael-snyder:L-2614 "ENCFF149OFF,ENCFF199RYE" HiSeq 2000 2016-11-08T23:40:47.469528+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JbfqQ03697ykK2jk2142yF ENCSR049KIZ https://www.encodeproject.org/experiments/ENCSR049KIZ transcription factor CUX1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF625SWQ https://www.encodeproject.org/files/ENCFF625SWQ/@@download/ENCFF625SWQ.bam ENCFF786AXQ https://www.encodeproject.org/files/ENCFF786AXQ/@@download/ENCFF786AXQ.bam 28.7 M 0 28.1 M 0.979 SE 36 36 native 0.0 M 21.1 M 20.5 M 0.714 0.98 0.98 45.27 95 1.03 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/181eab7f-a17b-483d-88fe-155eb06d1668/@@download/cross_correlation_plot/ENCFF002EDU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB130TAU michael-snyder:CDP_sc-6327_HepG2_Rep1 ENCFF002EDU Illumina Genome Analyzer IIx 2016-10-29T18:00:32.340128+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B26480jv1xgG4ppJK6q0Y0 ENCSR049KIZ https://www.encodeproject.org/experiments/ENCSR049KIZ transcription factor CUX1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF926DEM https://www.encodeproject.org/files/ENCFF926DEM/@@download/ENCFF926DEM.bam ENCFF815ODM https://www.encodeproject.org/files/ENCFF815ODM/@@download/ENCFF815ODM.bam 29.1 M 0 28.1 M 0.965 SE 36 36 native 0.0 M 21.2 M 20.6 M 0.710 0.98 0.98 41.39 110 1.04 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/539e82e2-21d6-40aa-8417-fc1410b88918/@@download/cross_correlation_plot/ENCFF002EDX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB834UUE michael-snyder:CDP_sc-6327_HepG2_Rep2 ENCFF002EDX Illumina Genome Analyzer IIx 2016-10-29T18:00:34.628490+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B266j0jv1jB80B4kPK217f ENCSR326TDH https://www.encodeproject.org/experiments/ENCSR326TDH transcription factor DMTF1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF127LND https://www.encodeproject.org/files/ENCFF127LND/@@download/ENCFF127LND.bam ENCFF452LEP https://www.encodeproject.org/files/ENCFF452LEP/@@download/ENCFF452LEP.bam 63.5 M 0 61.3 M 0.966 PE 100 100 native 25.6 M 0.0 M 25.3 M 0.798 0.99 0.99 103.39 205 1.06 4.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e499d77-b676-4496-9e4f-701eb6de1680/@@download/cross_correlation_plot/ENCFF997RXFENCFF967HUW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB175IKY michael-snyder:L-2135 "ENCFF967HUW,ENCFF997RXF" HiSeq 2000 2016-10-09T17:11:49.170504+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv683j0jv1x3KYJK9kQ04g4 ENCSR326TDH https://www.encodeproject.org/experiments/ENCSR326TDH transcription factor DMTF1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF154XNV https://www.encodeproject.org/files/ENCFF154XNV/@@download/ENCFF154XNV.bam ENCFF428BWZ https://www.encodeproject.org/files/ENCFF428BWZ/@@download/ENCFF428BWZ.bam 59.5 M 0 57.4 M 0.966 PE 100 100 native 24.0 M 0.0 M 23.9 M 0.803 1.00 1.00 246.88 210 1.06 4.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/24a67fb1-59d2-4cda-89fa-5359b7f4ebff/@@download/cross_correlation_plot/ENCFF550QFYENCFF242LOB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB180AAK michael-snyder:L-2136 "ENCFF242LOB,ENCFF550QFY" HiSeq 2000 2016-10-09T17:11:46.260814+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv685j0jv1f6Kg8jbGjKZJZ ENCSR754GYH https://www.encodeproject.org/experiments/ENCSR754GYH transcription factor E4F1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF437PGW https://www.encodeproject.org/files/ENCFF437PGW/@@download/ENCFF437PGW.bam ENCFF927PSM https://www.encodeproject.org/files/ENCFF927PSM/@@download/ENCFF927PSM.bam 79.1 M 0 76.2 M 0.964 PE 100 100 native 32.4 M 0.0 M 32.0 M 0.810 0.99 0.99 75.69 215 1.05 3.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/db438fb1-e4dd-430b-91ea-2b78667f089b/@@download/cross_correlation_plot/ENCFF300LMDENCFF032DNH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB305TGJ michael-snyder:L-1938 "ENCFF300LMD,ENCFF032DNH" HiSeq 2000 2016-10-09T17:40:45.830052+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5vq00jv1b6Q2yZ51Zb5JQ ENCSR754GYH https://www.encodeproject.org/experiments/ENCSR754GYH transcription factor E4F1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF651REX https://www.encodeproject.org/files/ENCFF651REX/@@download/ENCFF651REX.bam ENCFF294LZS https://www.encodeproject.org/files/ENCFF294LZS/@@download/ENCFF294LZS.bam 76.6 M 0 73.9 M 0.965 PE 100 100 native 31.3 M 0.0 M 31.0 M 0.810 0.99 0.99 99.54 210 1.05 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/838abe82-ce18-4fc9-8e13-ec3376f2ebfb/@@download/cross_correlation_plot/ENCFF518QGCENCFF543BXB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB116ZZD michael-snyder:L-1939 "ENCFF518QGC,ENCFF543BXB" HiSeq 2000 2016-10-09T17:40:17.449898+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5vx80jv1fGZb9Vx2f3z17 ENCSR167YMP https://www.encodeproject.org/experiments/ENCSR167YMP transcription factor ELF1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF914EWC https://www.encodeproject.org/files/ENCFF914EWC/@@download/ENCFF914EWC.bam ENCFF282GWX https://www.encodeproject.org/files/ENCFF282GWX/@@download/ENCFF282GWX.bam 87.9 M 0 85.0 M 0.968 PE 100 100 native 37.1 M 0.0 M 31.7 M 0.723 0.86 0.85 6.80 150 1.06 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/79f9fb65-7967-431f-b9a3-6011c53dc28a/@@download/cross_correlation_plot/ENCFF959SKXENCFF602GQP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB686AXJ michael-snyder:L-3509 "ENCFF602GQP,ENCFF959SKX" HiSeq 4000 2017-06-23T03:10:58.099512+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560bQQ03694G6Gx316y3V90 ENCSR167YMP https://www.encodeproject.org/experiments/ENCSR167YMP transcription factor ELF1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF995CWR https://www.encodeproject.org/files/ENCFF995CWR/@@download/ENCFF995CWR.bam ENCFF881VTJ https://www.encodeproject.org/files/ENCFF881VTJ/@@download/ENCFF881VTJ.bam 118.5 M 0 107.5 M 0.907 PE 100 100 native 46.7 M 0.0 M 41.6 M 0.702 0.89 0.89 8.96 150 1.08 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f725e6d-983a-467d-978a-a986813f4523/@@download/cross_correlation_plot/ENCFF962KRAENCFF668QFU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB666AKB michael-snyder:L-3510 "ENCFF668QFU,ENCFF962KRA" HiSeq 4000 2017-06-23T04:05:25.346225+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560bZ003695bbJY31xJppKQ ENCSR000EDV https://www.encodeproject.org/experiments/ENCSR000EDV transcription factor EP300-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF953FZD https://www.encodeproject.org/files/ENCFF953FZD/@@download/ENCFF953FZD.bam ENCFF789FCX https://www.encodeproject.org/files/ENCFF789FCX/@@download/ENCFF789FCX.bam 23.5 M 0 21.9 M 0.930 SE 36 36 native 0.0 M 16.4 M 15.8 M 0.673 0.98 0.98 41.64 105 1.05 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/29e59d3c-a3d9-46c3-b040-b6cc79d9ca2b/@@download/cross_correlation_plot/ENCFF000XVT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGY ENCFF000XVT Illumina Genome Analyzer 2016-12-10T18:01:59.556244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162BgQ036933PVVJ7Qq0156 ENCSR000EDV https://www.encodeproject.org/experiments/ENCSR000EDV transcription factor EP300-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF352YDX https://www.encodeproject.org/files/ENCFF352YDX/@@download/ENCFF352YDX.bam ENCFF134HIF https://www.encodeproject.org/files/ENCFF134HIF/@@download/ENCFF134HIF.bam 29.3 M 0 26.7 M 0.911 SE 36 36 native 0.0 M 19.8 M 19.4 M 0.662 0.98 0.98 51.23 90 1.03 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfb55923-fc63-4dd4-b5b0-b96ddb8ff3bc/@@download/cross_correlation_plot/ENCFF000XVS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALV ENCFF000XVS Illumina Genome Analyzer 2016-12-10T18:32:53.526381+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Bv80369PvYp91zK1Px37 ENCSR681WHQ https://www.encodeproject.org/experiments/ENCSR681WHQ transcription factor ETS1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF350GBI https://www.encodeproject.org/files/ENCFF350GBI/@@download/ENCFF350GBI.bam ENCFF382LLY https://www.encodeproject.org/files/ENCFF382LLY/@@download/ENCFF382LLY.bam 32.5 M 0 32.1 M 0.987 SE 36 36 native 0.0 M 24.4 M 23.5 M 0.722 0.96 0.96 27.49 130 1.03 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/18b3dbde-9a02-4254-8591-629fe5145915/@@download/cross_correlation_plot/ENCFF002EVV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB304LPY michael-snyder:ETS1_NB100-92169_HepG2_Rep1 ENCFF002EVV Illumina Genome Analyzer IIx 2016-10-09T17:01:07.599193+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48bQ0jv1XvFGkBjjfjQQG ENCSR681WHQ https://www.encodeproject.org/experiments/ENCSR681WHQ transcription factor ETS1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF553ZKD https://www.encodeproject.org/files/ENCFF553ZKD/@@download/ENCFF553ZKD.bam ENCFF323FPN https://www.encodeproject.org/files/ENCFF323FPN/@@download/ENCFF323FPN.bam 28.0 M 0 27.5 M 0.982 SE 36 36 native 0.0 M 21.0 M 20.2 M 0.720 0.96 0.96 27.02 110 1.05 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c11f3987-e381-46da-a13a-cf7c2f8a1524/@@download/cross_correlation_plot/ENCFF002EVR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB501CDX michael-snyder:ETS1_NB100-92169_HepG2_Rep2 ENCFF002EVR Illumina Genome Analyzer IIx 2016-10-09T17:00:41.555430+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48g00jv1f60PxyZ9JGP8K ENCSR177HDZ https://www.encodeproject.org/experiments/ENCSR177HDZ transcription factor FOS-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF604LYT https://www.encodeproject.org/files/ENCFF604LYT/@@download/ENCFF604LYT.bam ENCFF934MGT https://www.encodeproject.org/files/ENCFF934MGT/@@download/ENCFF934MGT.bam 33.8 M 0 32.4 M 0.959 SE 36 36 native 0.0 M 24.5 M 21.4 M 0.634 0.88 0.88 7.84 105 1.08 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b27cf46-7983-4a54-8512-3a2043bbeba2/@@download/cross_correlation_plot/ENCFF002EDT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB649SAP michael-snyder:c-Fos_sc-7202_HepG2_Rep1 ENCFF002EDT Illumina Genome Analyzer IIx 2016-10-29T17:59:01.619182+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29jQ0jv1zQyG3V5B45f3J ENCSR177HDZ https://www.encodeproject.org/experiments/ENCSR177HDZ transcription factor FOS-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF182PJL https://www.encodeproject.org/files/ENCFF182PJL/@@download/ENCFF182PJL.bam ENCFF167ATX https://www.encodeproject.org/files/ENCFF167ATX/@@download/ENCFF167ATX.bam 34.8 M 0 34.2 M 0.983 SE 36 36 native 0.0 M 25.7 M 24.7 M 0.710 0.96 0.96 27.35 100 1.02 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/2758353a-b64e-4aca-ab1b-57f0b68962ef/@@download/cross_correlation_plot/ENCFF002EDV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB399LRA michael-snyder:c-Fos_sc-7202_HepG2_Rep2 ENCFF002EDV Illumina Genome Analyzer IIx 2016-10-29T17:59:04.106398+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29v00jv1jB80B4kPK218y ENCSR066EBK https://www.encodeproject.org/experiments/ENCSR066EBK transcription factor FOXA2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF775MUG https://www.encodeproject.org/files/ENCFF775MUG/@@download/ENCFF775MUG.bam ENCFF789HZR https://www.encodeproject.org/files/ENCFF789HZR/@@download/ENCFF789HZR.bam 69.1 M 0 67.2 M 0.973 PE 100 100 native 29.0 M 0.0 M 28.7 M 0.830 0.99 0.99 114.73 195 1.64 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6634252-92df-4853-8332-8055c87b0540/@@download/cross_correlation_plot/ENCFF035BJTENCFF778EKH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB480XHG michael-snyder:L-1818 "ENCFF035BJT,ENCFF778EKH" HiSeq 2000 2017-01-26T00:53:55.365299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9K803695JvXVBgKgJgVX ENCSR066EBK https://www.encodeproject.org/experiments/ENCSR066EBK transcription factor FOXA2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF966VDA https://www.encodeproject.org/files/ENCFF966VDA/@@download/ENCFF966VDA.bam ENCFF558JGW https://www.encodeproject.org/files/ENCFF558JGW/@@download/ENCFF558JGW.bam 73.4 M 0 71.6 M 0.975 PE 100 100 native 31.0 M 0.0 M 30.5 M 0.831 0.98 0.98 64.32 195 1.75 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd72f024-6121-418a-bd9a-5800a6d01702/@@download/cross_correlation_plot/ENCFF414KXUENCFF015KAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB870SCL michael-snyder:L-1819 "ENCFF414KXU,ENCFF015KAY" HiSeq 2000 2017-01-26T01:27:56.226057+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBbQ036902FqZ27ZbbzqZ ENCSR480SUJ https://www.encodeproject.org/experiments/ENCSR480SUJ transcription factor FOXM1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF660IPT https://www.encodeproject.org/files/ENCFF660IPT/@@download/ENCFF660IPT.bam ENCFF976JOG https://www.encodeproject.org/files/ENCFF976JOG/@@download/ENCFF976JOG.bam 53.6 M 0 51.9 M 0.967 PE 100 100 native 22.2 M 0.0 M 22.1 M 0.824 1.00 1.00 224.25 210 1.06 4.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/71f9fe95-8e41-47f7-b1fd-4b489af2f36d/@@download/cross_correlation_plot/ENCFF504RIVENCFF606PZQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB379ALS michael-snyder:L-2298 "ENCFF606PZQ,ENCFF504RIV" HiSeq 2000 2016-10-09T17:36:47.188083+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61600jv1XpBpGXQxqxYJP ENCSR480SUJ https://www.encodeproject.org/experiments/ENCSR480SUJ transcription factor FOXM1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF171CCH https://www.encodeproject.org/files/ENCFF171CCH/@@download/ENCFF171CCH.bam ENCFF449QBW https://www.encodeproject.org/files/ENCFF449QBW/@@download/ENCFF449QBW.bam 62.0 M 0 60.0 M 0.968 PE 100 100 native 25.7 M 0.0 M 25.3 M 0.814 0.98 0.98 54.72 220 1.05 5.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/250a9014-be75-4b24-a080-b6e86a7c6fc7/@@download/cross_correlation_plot/ENCFF201TRTENCFF050AAK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB567LYZ michael-snyder:L-2299 "ENCFF050AAK,ENCFF201TRT" HiSeq 2000 2016-10-09T17:43:09.295151+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61880jv1x3KYJK9kQ04bb ENCSR029LBT https://www.encodeproject.org/experiments/ENCSR029LBT transcription factor FOXP1-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF209IIA https://www.encodeproject.org/files/ENCFF209IIA/@@download/ENCFF209IIA.bam ENCFF616NXW https://www.encodeproject.org/files/ENCFF616NXW/@@download/ENCFF616NXW.bam 72.2 M 0 69.8 M 0.967 PE 100 100 native 29.4 M 0.0 M 28.8 M 0.799 0.98 0.98 57.00 210 1.06 3.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/adb7135d-f360-4a2c-9588-6230b30d169b/@@download/cross_correlation_plot/ENCFF363OSMENCFF175BVH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB503ZEK michael-snyder:L-1731 "ENCFF363OSM,ENCFF175BVH" HiSeq 2000 2016-10-09T17:16:06.124430+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qk80jv1XYYX2Fxk3f4gP ENCSR029LBT https://www.encodeproject.org/experiments/ENCSR029LBT transcription factor FOXP1-human HepG2 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF317VSS https://www.encodeproject.org/files/ENCFF317VSS/@@download/ENCFF317VSS.bam ENCFF014WCS https://www.encodeproject.org/files/ENCFF014WCS/@@download/ENCFF014WCS.bam 77.8 M 0 75.2 M 0.967 PE 100 100 native 31.9 M 0.0 M 31.0 M 0.797 0.97 0.97 36.94 205 1.05 3.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce429a91-2215-4604-85e4-5259e777fa43/@@download/cross_correlation_plot/ENCFF294HSTENCFF234SUV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB572NYO michael-snyder:L-1735 "ENCFF234SUV,ENCFF294HST" HiSeq 2000 2016-10-09T17:16:21.385286+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qpj0jv1xPyfX78Yz4gY5 ENCSR219NRT https://www.encodeproject.org/experiments/ENCSR219NRT "RNA binding protein,transcription factor" GTF2F1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF705TRN https://www.encodeproject.org/files/ENCFF705TRN/@@download/ENCFF705TRN.bam ENCFF749NTQ https://www.encodeproject.org/files/ENCFF749NTQ/@@download/ENCFF749NTQ.bam 29.5 M 0 29.2 M 0.987 SE 36 36 native 0.0 M 21.9 M 20.7 M 0.700 0.95 0.95 19.44 130 1.03 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/20c273c0-508a-4294-982a-ec1c2c42ea7d/@@download/cross_correlation_plot/ENCFF002EAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB213FHF michael-snyder:TFIIF_ab28179_HepG2_Rep2 ENCFF002EAV Illumina Genome Analyzer IIx 2016-10-09T17:10:01.557649+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xpQ0jv1XvFGkBjjfjQ45 ENCSR219NRT https://www.encodeproject.org/experiments/ENCSR219NRT "RNA binding protein,transcription factor" GTF2F1-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF368FEM https://www.encodeproject.org/files/ENCFF368FEM/@@download/ENCFF368FEM.bam ENCFF557PDF https://www.encodeproject.org/files/ENCFF557PDF/@@download/ENCFF557PDF.bam 27.7 M 0 25.4 M 0.916 SE 36 36 native 0.0 M 19.4 M 19.0 M 0.687 0.98 0.98 50.08 80 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b84a62f-7a4d-4e61-8025-0ec3eeb78c0f/@@download/cross_correlation_plot/ENCFF002EAR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB758NLY michael-snyder:TFIIF_ab28179_HepG2_Rep3 ENCFF002EAR Illumina Genome Analyzer IIx 2016-10-09T17:09:48.678984+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xv00jv1XYYX2Fxk3f4kv ENCSR529JYA https://www.encodeproject.org/experiments/ENCSR529JYA transcription factor HCFC1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF242BHJ https://www.encodeproject.org/files/ENCFF242BHJ/@@download/ENCFF242BHJ.bam ENCFF465MCM https://www.encodeproject.org/files/ENCFF465MCM/@@download/ENCFF465MCM.bam 24.8 M 0 24.2 M 0.976 SE 36 36 native 0.0 M 17.9 M 17.4 M 0.702 0.97 0.98 41.52 115 1.08 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/43d82cf5-9bda-4e45-b946-719148e5b419/@@download/cross_correlation_plot/ENCFF002EDN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB036AVF michael-snyder:HCFC1_NB100-68209_HepG2_Rep1 ENCFF002EDN Illumina Genome Analyzer IIx 2016-10-09T17:34:09.747113+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5jbQ0jv1pv809pj5Z1VkZ ENCSR529JYA https://www.encodeproject.org/experiments/ENCSR529JYA transcription factor HCFC1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF215EOS https://www.encodeproject.org/files/ENCFF215EOS/@@download/ENCFF215EOS.bam ENCFF926YYO https://www.encodeproject.org/files/ENCFF926YYO/@@download/ENCFF926YYO.bam 26.1 M 0 25.6 M 0.979 SE 36 36 native 0.0 M 19.4 M 18.7 M 0.715 0.97 0.98 49.88 115 1.22 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/8cec9102-a217-4f86-a2a3-8888e3b82aa1/@@download/cross_correlation_plot/ENCFF002EDS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB649IQZ michael-snyder:HCFC1_NB100-68209_HepG2_Rep2 ENCFF002EDS Illumina Genome Analyzer IIx 2016-10-09T17:09:12.479821+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bG00jv1XvFGkBjjfjPqP ENCSR337NWW https://www.encodeproject.org/experiments/ENCSR337NWW "transcription factor,chromatin remodeller" HDAC2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF524WHV https://www.encodeproject.org/files/ENCFF524WHV/@@download/ENCFF524WHV.bam ENCFF279VWS https://www.encodeproject.org/files/ENCFF279VWS/@@download/ENCFF279VWS.bam 67.7 M 0 65.7 M 0.971 PE 100 100 native 28.0 M 0.0 M 27.5 M 0.812 0.98 0.98 53.49 215 1.05 4.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bbff02b-08b5-42a8-b345-374bd1bcb6af/@@download/cross_correlation_plot/ENCFF489LNLENCFF974DWD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB492HKP michael-snyder:L-1820 "ENCFF974DWD,ENCFF489LNL" HiSeq 2000 2016-10-09T17:14:09.535426+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fq00jv1xPyfX78Yz4gKX ENCSR337NWW https://www.encodeproject.org/experiments/ENCSR337NWW "transcription factor,chromatin remodeller" HDAC2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF570MLW https://www.encodeproject.org/files/ENCFF570MLW/@@download/ENCFF570MLW.bam ENCFF633RNP https://www.encodeproject.org/files/ENCFF633RNP/@@download/ENCFF633RNP.bam 60.0 M 0 58.2 M 0.969 PE 100 100 native 24.7 M 0.0 M 24.3 M 0.809 0.98 0.98 53.57 210 1.06 3.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2c2c7d3-705c-4034-aa4c-48a68bdb929c/@@download/cross_correlation_plot/ENCFF917SHUENCFF862EVT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB579ANK michael-snyder:L-1821 "ENCFF862EVT,ENCFF917SHU" HiSeq 2000 2016-10-09T17:13:24.597319+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fvQ0jv1vY92b0GYjVFKK ENCSR691HAI https://www.encodeproject.org/experiments/ENCSR691HAI transcription factor HDAC5-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF580RYA https://www.encodeproject.org/files/ENCFF580RYA/@@download/ENCFF580RYA.bam ENCFF392VTZ https://www.encodeproject.org/files/ENCFF392VTZ/@@download/ENCFF392VTZ.bam 85.6 M 0 83.3 M 0.973 PE 100 100 native 35.9 M 0.0 M 35.6 M 0.832 0.99 0.99 123.07 210 1.05 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f1e0236-934f-4bd1-909b-b4232b335004/@@download/cross_correlation_plot/ENCFF750LLDENCFF327YKM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB312FBU michael-snyder:L-1888 "ENCFF327YKM,ENCFF750LLD" HiSeq 2000 2016-10-09T17:40:48.002045+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5v380jv1b6Q2yZ51Zb5J7 ENCSR691HAI https://www.encodeproject.org/experiments/ENCSR691HAI transcription factor HDAC5-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF653HDL https://www.encodeproject.org/files/ENCFF653HDL/@@download/ENCFF653HDL.bam ENCFF273DSW https://www.encodeproject.org/files/ENCFF273DSW/@@download/ENCFF273DSW.bam 63.2 M 0 61.7 M 0.976 PE 100 100 native 26.8 M 0.0 M 26.6 M 0.841 0.99 0.99 104.79 235 1.06 5.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c0289ce-1e75-43b4-9912-6b269f84406a/@@download/cross_correlation_plot/ENCFF328CGPENCFF408DUG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB362IUK michael-snyder:L-1889 "ENCFF408DUG,ENCFF328CGP" HiSeq 2000 2016-10-09T17:38:57.157553+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5v5Q0jv1v69xp00g4J2QB ENCSR792BNO https://www.encodeproject.org/experiments/ENCSR792BNO "RNA binding protein,transcription factor" HDGF-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF095YPH https://www.encodeproject.org/files/ENCFF095YPH/@@download/ENCFF095YPH.bam ENCFF234ZFE https://www.encodeproject.org/files/ENCFF234ZFE/@@download/ENCFF234ZFE.bam 126.1 M 0 118.1 M 0.936 PE 100 100 native 50.2 M 0.0 M 43.8 M 0.694 0.87 0.87 7.60 250 1.03 5.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/97139999-8459-4fa7-86f2-4354dad4d00b/@@download/cross_correlation_plot/ENCFF408GQBENCFF980PLE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB498ESG michael-snyder:L-2171 "ENCFF980PLE,ENCFF408GQB" HiSeq 4000 2016-10-27T22:28:05.255543+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bx4003697KPkyX9BPQF62 ENCSR792BNO https://www.encodeproject.org/experiments/ENCSR792BNO "RNA binding protein,transcription factor" HDGF-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF196MAP https://www.encodeproject.org/files/ENCFF196MAP/@@download/ENCFF196MAP.bam ENCFF754NJM https://www.encodeproject.org/files/ENCFF754NJM/@@download/ENCFF754NJM.bam 99.8 M 0 95.9 M 0.961 PE 100 100 native 40.1 M 0.0 M 38.2 M 0.766 0.95 0.95 21.47 255 1.04 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/455d322d-4c7b-4b04-98ac-7d81857e6939/@@download/cross_correlation_plot/ENCFF480BLTENCFF178TFQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB945MQH michael-snyder:L-2172 "ENCFF480BLT,ENCFF178TFQ" HiSeq 4000 2016-10-27T22:25:22.772640+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bx7Q0369BX1xqb1B80vZ6 ENCSR409VFP https://www.encodeproject.org/experiments/ENCSR409VFP transcription factor HES1-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR278JQG https://www.encodeproject.org/experiments/ENCSR278JQG transcription factor IKZF1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF143LAN https://www.encodeproject.org/files/ENCFF143LAN/@@download/ENCFF143LAN.bam ENCFF912PQA https://www.encodeproject.org/files/ENCFF912PQA/@@download/ENCFF912PQA.bam 60.3 M 0 58.4 M 0.968 PE 100 100 native 25.1 M 0.0 M 24.8 M 0.823 0.99 0.99 110.29 215 1.06 5.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/3391a834-cb9b-4646-a042-228d5fdc8430/@@download/cross_correlation_plot/ENCFF467WHQENCFF087IYL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB786ZXI michael-snyder:L-2300 "ENCFF467WHQ,ENCFF087IYL" HiSeq 2000 2016-10-09T17:14:05.512719+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yK80jv1XYYX2Fxk3f4pX ENCSR278JQG https://www.encodeproject.org/experiments/ENCSR278JQG transcription factor IKZF1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF379UJI https://www.encodeproject.org/files/ENCFF379UJI/@@download/ENCFF379UJI.bam ENCFF208KNM https://www.encodeproject.org/files/ENCFF208KNM/@@download/ENCFF208KNM.bam 62.7 M 0 60.5 M 0.965 PE 100 100 native 25.7 M 0.0 M 25.7 M 0.818 1.00 1.00 301.13 225 1.05 5.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/90820ee7-9269-4f1a-a01d-3618cc7f67fb/@@download/cross_correlation_plot/ENCFF761HWGENCFF035FBQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB396MDN michael-snyder:L-2301 "ENCFF035FBQ,ENCFF761HWG" HiSeq 2000 2016-10-09T17:16:28.402344+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yPj0jv1vY92b0GYjVFbz ENCSR000EEK https://www.encodeproject.org/experiments/ENCSR000EEK transcription factor JUN-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF074GYD https://www.encodeproject.org/files/ENCFF074GYD/@@download/ENCFF074GYD.bam ENCFF065CFY https://www.encodeproject.org/files/ENCFF065CFY/@@download/ENCFF065CFY.bam 28.7 M 0 22.4 M 0.779 SE 36 36 native 0.0 M 16.3 M 15.8 M 0.548 0.97 0.97 33.37 125 1.07 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc15ed77-a02e-4bb3-bfe9-46150e567399/@@download/cross_correlation_plot/ENCFF000XQU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARQ ENCFF000XQU Illumina Genome Analyzer 2016-12-11T04:55:57.951787+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667jj0369BJyPz9fb9qYVZ ENCSR000EEK https://www.encodeproject.org/experiments/ENCSR000EEK transcription factor JUN-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF122BQB https://www.encodeproject.org/files/ENCFF122BQB/@@download/ENCFF122BQB.bam ENCFF295FER https://www.encodeproject.org/files/ENCFF295FER/@@download/ENCFF295FER.bam 28.3 M 0 23.0 M 0.811 SE 36 36 native 0.0 M 17.1 M 16.4 M 0.579 0.96 0.96 25.44 135 1.09 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ad36d6d-0f06-4ec6-9f71-a8d452d7c78f/@@download/cross_correlation_plot/ENCFF000XQT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARR ENCFF000XQT Illumina Genome Analyzer 2016-12-11T04:57:23.958359+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667xj03696Kk1YFv8qy58b ENCSR000EEI https://www.encodeproject.org/experiments/ENCSR000EEI transcription factor JUND-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF416LMF https://www.encodeproject.org/files/ENCFF416LMF/@@download/ENCFF416LMF.bam ENCFF750TAX https://www.encodeproject.org/files/ENCFF750TAX/@@download/ENCFF750TAX.bam 28.7 M 0 23.3 M 0.813 SE 36 36 native 0.0 M 17.3 M 16.7 M 0.583 0.97 0.97 41.33 125 1.25 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0e20cc3-2223-4f4a-a253-c27d323b9818/@@download/cross_correlation_plot/ENCFF000XTR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACP ENCFF000XTR Illumina Genome Analyzer 2016-12-10T20:50:49.594674+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162xk8036933PVVJ7Qq018y ENCSR000EEI https://www.encodeproject.org/experiments/ENCSR000EEI transcription factor JUND-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF594GDM https://www.encodeproject.org/files/ENCFF594GDM/@@download/ENCFF594GDM.bam ENCFF676IYR https://www.encodeproject.org/files/ENCFF676IYR/@@download/ENCFF676IYR.bam 22.0 M 0 19.7 M 0.897 SE 36 36 native 0.0 M 15.0 M 14.5 M 0.662 0.97 0.98 52.09 115 1.43 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab9f828c-2f3a-4a73-8e66-686ec014d2b7/@@download/cross_correlation_plot/ENCFF000XTQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACS ENCFF000XTQ Illumina Genome Analyzer 2016-12-10T20:43:47.330860+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162xyj0369445BJJ915X9fG ENCSR620YNB https://www.encodeproject.org/experiments/ENCSR620YNB "transcription factor,chromatin remodeller,RNA binding protein" KAT2B-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF880EMH https://www.encodeproject.org/files/ENCFF880EMH/@@download/ENCFF880EMH.bam ENCFF238OKX https://www.encodeproject.org/files/ENCFF238OKX/@@download/ENCFF238OKX.bam 26.0 M 0 25.0 M 0.962 SE 36 36 native 0.0 M 19.1 M 18.3 M 0.702 0.96 0.96 24.74 120 1.02 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d80977b-1c34-4ab1-a6b6-da2d9cd6eafa/@@download/cross_correlation_plot/ENCFF002EDZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB429EFB michael-snyder:PCAF_3378_HepG2_Rep1 ENCFF002EDZ Illumina Genome Analyzer IIx 2016-10-09T17:09:37.864507+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xF00jv1vY92b0GYjVFZj ENCSR620YNB https://www.encodeproject.org/experiments/ENCSR620YNB "transcription factor,chromatin remodeller,RNA binding protein" KAT2B-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF322GHA https://www.encodeproject.org/files/ENCFF322GHA/@@download/ENCFF322GHA.bam ENCFF665ZGD https://www.encodeproject.org/files/ENCFF665ZGD/@@download/ENCFF665ZGD.bam 22.0 M 0 21.3 M 0.969 SE 36 36 native 0.0 M 15.9 M 15.6 M 0.710 0.98 0.99 73.28 120 1.05 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6842acb-7773-4104-9343-bd2b71252f8a/@@download/cross_correlation_plot/ENCFF002EED.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB001BPZ michael-snyder:PCAF_3378_HepG2_Rep2 ENCFF002EED Illumina Genome Analyzer IIx 2016-10-09T17:09:24.990959+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xG80jv1vY92b0GYjVFb1 ENCSR383HCB https://www.encodeproject.org/experiments/ENCSR383HCB transcription factor KLF5-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF597XJG https://www.encodeproject.org/files/ENCFF597XJG/@@download/ENCFF597XJG.bam ENCFF661NZH https://www.encodeproject.org/files/ENCFF661NZH/@@download/ENCFF661NZH.bam 78.1 M 0 75.6 M 0.968 PE 100 100 native 32.2 M 0.0 M 31.5 M 0.807 0.98 0.98 50.29 185 1.06 3.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f507fa0-da5f-481b-9e6e-0af8d1014304/@@download/cross_correlation_plot/ENCFF538SNWENCFF171SJQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB880FSO michael-snyder:L-2617 "ENCFF171SJQ,ENCFF538SNW" HiSeq 2000 2016-10-09T17:07:42.379385+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48xQ0jv1zBYbxYJ5zzzJ8 ENCSR383HCB https://www.encodeproject.org/experiments/ENCSR383HCB transcription factor KLF5-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF591CBG https://www.encodeproject.org/files/ENCFF591CBG/@@download/ENCFF591CBG.bam ENCFF665KFR https://www.encodeproject.org/files/ENCFF665KFR/@@download/ENCFF665KFR.bam 86.1 M 0 83.5 M 0.969 PE 100 100 native 35.5 M 0.0 M 34.8 M 0.808 0.98 0.98 48.73 190 1.05 3.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/911c68e4-00e6-4603-a2a8-c2ee6284f4ec/@@download/cross_correlation_plot/ENCFF686RMLENCFF734TBJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB950QWI michael-snyder:L-2618 "ENCFF734TBJ,ENCFF686RML" HiSeq 2000 2016-10-09T17:08:30.944023+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48z00jv1xPyfX78Yz4j3z ENCSR000EEC https://www.encodeproject.org/experiments/ENCSR000EEC transcription factor MAFF-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF728VLB https://www.encodeproject.org/files/ENCFF728VLB/@@download/ENCFF728VLB.bam ENCFF836BQL https://www.encodeproject.org/files/ENCFF836BQL/@@download/ENCFF836BQL.bam 29.3 M 0 27.2 M 0.928 SE 36 36 native 0.0 M 20.6 M 19.8 M 0.676 0.97 0.97 39.35 120 1.30 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/302674d4-02aa-4a26-88c6-d8a8a698ae35/@@download/cross_correlation_plot/ENCFF000XUA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARK ENCFF000XUA Illumina Genome Analyzer 2016-12-11T02:05:48.215704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163fg003696z7JqGk4Yzy4p ENCSR000EEC https://www.encodeproject.org/experiments/ENCSR000EEC transcription factor MAFF-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF991ICQ https://www.encodeproject.org/files/ENCFF991ICQ/@@download/ENCFF991ICQ.bam ENCFF851GVD https://www.encodeproject.org/files/ENCFF851GVD/@@download/ENCFF851GVD.bam 34.3 M 0 19.1 M 0.555 SE 36 36 native 0.0 M 13.0 M 12.4 M 0.360 0.95 0.96 33.02 120 2.03 2.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/19063358-a08d-4410-9f7e-df2f29b957a3/@@download/cross_correlation_plot/ENCFF000XTZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARJ ENCFF000XTZ Illumina Genome Analyzer 2016-12-11T02:06:26.361470+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163fv803696z7JqGk4Yzy53 ENCSR000EDZ https://www.encodeproject.org/experiments/ENCSR000EDZ transcription factor MAFK-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF310RSH https://www.encodeproject.org/files/ENCFF310RSH/@@download/ENCFF310RSH.bam ENCFF397RLJ https://www.encodeproject.org/files/ENCFF397RLJ/@@download/ENCFF397RLJ.bam 32.4 M 0 29.9 M 0.923 SE 36 36 native 0.0 M 22.7 M 22.0 M 0.680 0.97 0.97 42.80 120 1.21 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/abbdb186-aab2-42f8-b8be-5246a62bc1b4/@@download/cross_correlation_plot/ENCFF000XUU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFE ENCFF000XUU Illumina Genome Analyzer 2016-10-09T17:03:14.724833+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Ff00jv1g5yGjfvVx0PQy ENCSR000EDZ https://www.encodeproject.org/experiments/ENCSR000EDZ transcription factor MAFK-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF755GBM https://www.encodeproject.org/files/ENCFF755GBM/@@download/ENCFF755GBM.bam ENCFF852UNR https://www.encodeproject.org/files/ENCFF852UNR/@@download/ENCFF852UNR.bam 33.4 M 0 29.8 M 0.892 SE 36 36 native 0.0 M 22.6 M 22.1 M 0.662 0.98 0.98 57.35 95 1.16 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/9bac60d7-a9ca-4daf-ae53-fe3dc7de5e97/@@download/cross_correlation_plot/ENCFF000XVK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEP ENCFF000XVK Illumina Genome Analyzer 2016-10-09T17:03:03.041608+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Fj00jv1zBYbxYJ5zzzqp ENCSR000EEB https://www.encodeproject.org/experiments/ENCSR000EEB transcription factor MAFK-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF326SGF https://www.encodeproject.org/files/ENCFF326SGF/@@download/ENCFF326SGF.bam ENCFF122DRL https://www.encodeproject.org/files/ENCFF122DRL/@@download/ENCFF122DRL.bam 40.7 M 0 36.8 M 0.903 SE 36 36 native 0.0 M 28.3 M 26.3 M 0.645 0.93 0.95 23.13 125 1.49 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/db02b393-e8ca-461c-90d8-0244ff8aab21/@@download/cross_correlation_plot/ENCFF000XUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABD ENCFF000XUL Illumina Genome Analyzer 2016-10-09T17:34:18.853403+00:00 released processing https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Z6j0jv1g5yGjfvVx0PKP ENCSR000EEB https://www.encodeproject.org/experiments/ENCSR000EEB transcription factor MAFK-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF420BSH https://www.encodeproject.org/files/ENCFF420BSH/@@download/ENCFF420BSH.bam ENCFF680GLU https://www.encodeproject.org/files/ENCFF680GLU/@@download/ENCFF680GLU.bam 39.8 M 0 36.3 M 0.913 SE 36 36 native 0.0 M 28.2 M 26.0 M 0.654 0.93 0.94 22.02 115 1.57 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c7c5d75-990f-4ef4-bf70-5ddb81710830/@@download/cross_correlation_plot/ENCFF000XUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAY ENCFF000XUK Illumina Genome Analyzer 2016-10-09T17:34:06.352534+00:00 released processing https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Z800jv1zBYbxYJ5zzzby ENCSR362GVE https://www.encodeproject.org/experiments/ENCSR362GVE transcription factor MLLT1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF932GJQ https://www.encodeproject.org/files/ENCFF932GJQ/@@download/ENCFF932GJQ.bam ENCFF083BMI https://www.encodeproject.org/files/ENCFF083BMI/@@download/ENCFF083BMI.bam 146.5 M 0 78.2 M 0.534 PE 100 100 native 23.0 M 0.0 M 20.2 M 0.276 0.88 0.89 9.02 235 1.32 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/8cafce74-6c49-46e4-a4da-3d761d5b2220/@@download/cross_correlation_plot/ENCFF662SQZENCFF094EKL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB960WNA michael-snyder:L-2175 "ENCFF094EKL,ENCFF662SQZ" HiSeq 4000 2017-03-01T18:07:48.103462+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pqvkj0369PKpFGF3GyQ5bx ENCSR362GVE https://www.encodeproject.org/experiments/ENCSR362GVE transcription factor MLLT1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF776SYZ https://www.encodeproject.org/files/ENCFF776SYZ/@@download/ENCFF776SYZ.bam ENCFF320MZG https://www.encodeproject.org/files/ENCFF320MZG/@@download/ENCFF320MZG.bam 196.1 M 0 185.9 M 0.948 PE 100 100 native 78.9 M 0.0 M 73.1 M 0.745 0.93 0.93 13.48 220 1.03 2.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/70e11c6b-34ee-494d-a643-9192c09a7558/@@download/cross_correlation_plot/ENCFF650AXRENCFF208KZO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB423QCT michael-snyder:L-2176 "ENCFF650AXR,ENCFF208KZO" HiSeq 4000 2017-03-01T18:09:00.046802+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pqx0Q036944BZVGyqBYB5Q ENCSR261EDU https://www.encodeproject.org/experiments/ENCSR261EDU transcription factor MNT-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF266AHN https://www.encodeproject.org/files/ENCFF266AHN/@@download/ENCFF266AHN.bam ENCFF737PIO https://www.encodeproject.org/files/ENCFF737PIO/@@download/ENCFF737PIO.bam 61.3 M 0 59.4 M 0.970 PE 100 100 native 25.5 M 0.0 M 25.0 M 0.815 0.98 0.98 46.71 205 1.23 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/a845524a-cd81-4620-9343-ea788e7ebc8a/@@download/cross_correlation_plot/ENCFF338EIMENCFF873VGP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB903IJH michael-snyder:L-1678 "ENCFF873VGP,ENCFF338EIM" HiSeq 2000 2016-10-09T17:02:30.059953+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J080jv1XYYX2Fxk3f5J8 ENCSR261EDU https://www.encodeproject.org/experiments/ENCSR261EDU transcription factor MNT-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF510TME https://www.encodeproject.org/files/ENCFF510TME/@@download/ENCFF510TME.bam ENCFF655ILW https://www.encodeproject.org/files/ENCFF655ILW/@@download/ENCFF655ILW.bam 55.1 M 0 53.6 M 0.973 PE 100 100 native 23.1 M 0.0 M 22.5 M 0.816 0.97 0.97 34.89 205 1.27 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b1a3b4c-bb2c-4588-b98e-f57fd66770f2/@@download/cross_correlation_plot/ENCFF463BOFENCFF349RWV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB698MGV michael-snyder:L-1679 "ENCFF463BOF,ENCFF349RWV" HiSeq 2000 2016-10-09T17:01:58.112663+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J1j0jv1g5yGjfvVx0P7Y ENCSR730TBC https://www.encodeproject.org/experiments/ENCSR730TBC transcription factor MNT-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF369YVA https://www.encodeproject.org/files/ENCFF369YVA/@@download/ENCFF369YVA.bam ENCFF189YTO https://www.encodeproject.org/files/ENCFF189YTO/@@download/ENCFF189YTO.bam 93.2 M 0 91.3 M 0.980 PE 100 100 native 40.0 M 0.0 M 36.9 M 0.791 0.92 0.92 12.82 210 1.05 4.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c19d87b-84d6-46b6-a3b7-88953d786cca/@@download/cross_correlation_plot/ENCFF594PZUENCFF195VBJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB355XFO michael-snyder:L-3484 "ENCFF594PZU,ENCFF195VBJ" HiSeq 4000 2017-06-06T18:21:19.906409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3V480369Gx2gb917Q1j13 ENCSR730TBC https://www.encodeproject.org/experiments/ENCSR730TBC transcription factor MNT-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF761YGL https://www.encodeproject.org/files/ENCFF761YGL/@@download/ENCFF761YGL.bam ENCFF968LYC https://www.encodeproject.org/files/ENCFF968LYC/@@download/ENCFF968LYC.bam 105.1 M 0 102.9 M 0.979 PE 100 100 native 45.0 M 0.0 M 42.3 M 0.806 0.94 0.94 16.71 150 1.07 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c981b33-8c3f-407b-ad3b-f96636a9c212/@@download/cross_correlation_plot/ENCFF089AERENCFF032BZZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB958WUN michael-snyder:L-3485 "ENCFF089AER,ENCFF032BZZ" HiSeq 4000 2017-06-06T18:21:21.926426+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3V68036990P6v90pyg35G ENCSR355PCH https://www.encodeproject.org/experiments/ENCSR355PCH transcription factor MTA3-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF942FEI https://www.encodeproject.org/files/ENCFF942FEI/@@download/ENCFF942FEI.bam ENCFF653OLM https://www.encodeproject.org/files/ENCFF653OLM/@@download/ENCFF653OLM.bam 71.2 M 0 68.9 M 0.968 PE 100 100 native 29.1 M 0.0 M 28.4 M 0.798 0.98 0.98 40.36 205 1.05 4.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdc4bcb6-19bc-4285-99bb-9cefe177e78e/@@download/cross_correlation_plot/ENCFF199WEPENCFF821QQP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB460XZC michael-snyder:L-1740 "ENCFF821QQP,ENCFF199WEP" HiSeq 2000 2016-10-09T17:07:38.928902+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41Jj0jv1XYYX2Fxk3f4yB ENCSR355PCH https://www.encodeproject.org/experiments/ENCSR355PCH transcription factor MTA3-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF685HQT https://www.encodeproject.org/files/ENCFF685HQT/@@download/ENCFF685HQT.bam ENCFF917MSD https://www.encodeproject.org/files/ENCFF917MSD/@@download/ENCFF917MSD.bam 65.0 M 0 62.9 M 0.967 PE 100 100 native 26.7 M 0.0 M 26.1 M 0.802 0.98 0.98 44.83 210 1.05 4.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/00cd6b82-7a5c-4ec0-b603-59e679c7eca2/@@download/cross_correlation_plot/ENCFF573HKPENCFF886XFJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB102WLQ michael-snyder:L-1741 "ENCFF573HKP,ENCFF886XFJ" HiSeq 2000 2016-10-09T17:07:29.809437+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41P80jv1vY92b0GYjVFkF ENCSR000EDU https://www.encodeproject.org/experiments/ENCSR000EDU transcription factor MXI1-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR424NSN https://www.encodeproject.org/experiments/ENCSR424NSN transcription factor NBN-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR562TYX https://www.encodeproject.org/experiments/ENCSR562TYX transcription factor NFATC3-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR488EES https://www.encodeproject.org/experiments/ENCSR488EES transcription factor NFE2L2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF421XBU https://www.encodeproject.org/files/ENCFF421XBU/@@download/ENCFF421XBU.bam ENCFF935IVR https://www.encodeproject.org/files/ENCFF935IVR/@@download/ENCFF935IVR.bam 30.2 M 0 30.0 M 0.994 SE 36 36 native 0.0 M 23.3 M 21.9 M 0.723 0.94 0.94 16.93 125 1.04 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4dc0378-f171-4355-89ce-669316b5d368/@@download/cross_correlation_plot/ENCFF002EAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB098SOX michael-snyder:Nrf2_ab62352_HepG2_Rep1 ENCFF002EAY Illumina Genome Analyzer IIx 2016-10-09T17:33:54.184168+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YZQ0jv1g5yGjfvVx0PJk ENCSR488EES https://www.encodeproject.org/experiments/ENCSR488EES transcription factor NFE2L2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF063AFU https://www.encodeproject.org/files/ENCFF063AFU/@@download/ENCFF063AFU.bam ENCFF911VGR https://www.encodeproject.org/files/ENCFF911VGR/@@download/ENCFF911VGR.bam 33.4 M 0 32.9 M 0.984 SE 36 36 native 0.0 M 24.8 M 23.9 M 0.716 0.97 0.97 33.87 120 1.08 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/eceaa735-993f-4faa-b543-084939c80083/@@download/cross_correlation_plot/ENCFF002EAS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB751OIQ michael-snyder:Nrf2_ab62352_HepG2_Rep2 ENCFF002EAS Illumina Genome Analyzer IIx 2016-10-09T17:33:59.846839+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Ybj0jv1zBYbxYJ5zzzb5 ENCSR145BHD https://www.encodeproject.org/experiments/ENCSR145BHD transcription factor NFRKB-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF407YXS https://www.encodeproject.org/files/ENCFF407YXS/@@download/ENCFF407YXS.bam ENCFF286UHQ https://www.encodeproject.org/files/ENCFF286UHQ/@@download/ENCFF286UHQ.bam 61.9 M 0 60.0 M 0.970 PE 100 100 native 25.4 M 0.0 M 24.7 M 0.797 0.97 0.97 35.36 210 1.06 4.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f1e802e-60a8-40db-8e97-cbab6eef68f9/@@download/cross_correlation_plot/ENCFF780PZZENCFF487XNJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB896JFB michael-snyder:L-1730 "ENCFF780PZZ,ENCFF487XNJ" HiSeq 2000 2016-10-09T17:13:57.568824+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jB80jv1XvFGkBjjfjPy5 ENCSR145BHD https://www.encodeproject.org/experiments/ENCSR145BHD transcription factor NFRKB-human HepG2 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF151AWK https://www.encodeproject.org/files/ENCFF151AWK/@@download/ENCFF151AWK.bam ENCFF811RKC https://www.encodeproject.org/files/ENCFF811RKC/@@download/ENCFF811RKC.bam 76.5 M 0 74.1 M 0.969 PE 100 100 native 31.5 M 0.0 M 30.6 M 0.800 0.97 0.97 35.22 210 1.05 4.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/032fe65e-e4fb-4c31-83a5-755597dee6c9/@@download/cross_correlation_plot/ENCFF318DFZENCFF244KAZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB615KYN michael-snyder:L-1734 "ENCFF318DFZ,ENCFF244KAZ" HiSeq 2000 2016-10-09T17:14:48.206494+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jFj0jv1XvFGkBjjfjPyK ENCSR206VMT https://www.encodeproject.org/experiments/ENCSR206VMT transcription factor NFRKB-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF305FAY https://www.encodeproject.org/files/ENCFF305FAY/@@download/ENCFF305FAY.bam ENCFF484MLA https://www.encodeproject.org/files/ENCFF484MLA/@@download/ENCFF484MLA.bam 135.6 M 0 132.8 M 0.979 PE 100 100 native 58.5 M 0.0 M 54.9 M 0.810 0.94 0.94 16.44 155 1.04 6.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/14b2224d-d4cc-4b4d-bea4-6550710d80ee/@@download/cross_correlation_plot/ENCFF905WONENCFF883VGL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB016JPR michael-snyder:L-3482 "ENCFF905WON,ENCFF883VGL" HiSeq 4000 2017-06-16T09:02:28.178361+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KJFj0369Fq9yj7G51z4F2 ENCSR206VMT https://www.encodeproject.org/experiments/ENCSR206VMT transcription factor NFRKB-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF270GPL https://www.encodeproject.org/files/ENCFF270GPL/@@download/ENCFF270GPL.bam ENCFF224FVT https://www.encodeproject.org/files/ENCFF224FVT/@@download/ENCFF224FVT.bam 135.3 M 0 132.0 M 0.976 PE 100 100 native 57.3 M 0.0 M 54.7 M 0.808 0.95 0.96 22.56 155 1.04 4.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/9564ebcb-9e47-4c89-9315-312dc993a09b/@@download/cross_correlation_plot/ENCFF722WHMENCFF991FPT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB548DKA michael-snyder:L-3483 "ENCFF722WHM,ENCFF991FPT" HiSeq 4000 2017-06-16T08:52:19.085784+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KJPQ03696035XFZ3Vq30P ENCSR779HYT https://www.encodeproject.org/experiments/ENCSR779HYT RNA binding protein NKRF-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF138RUG https://www.encodeproject.org/files/ENCFF138RUG/@@download/ENCFF138RUG.bam ENCFF411PEP https://www.encodeproject.org/files/ENCFF411PEP/@@download/ENCFF411PEP.bam 71.8 M 0 68.5 M 0.954 PE 100 100 native 29.0 M 0.0 M 27.9 M 0.777 0.96 0.96 26.59 180 1.05 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/d107690a-1ced-400e-8204-6c0af7e641f8/@@download/cross_correlation_plot/ENCFF138JTTENCFF579JWN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB513DSQ michael-snyder:L-3446 "ENCFF579JWN,ENCFF138JTT" HiSeq 4000 2017-05-05T22:17:35.636734+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469qvj03698bkBg707zYXp8 ENCSR779HYT https://www.encodeproject.org/experiments/ENCSR779HYT RNA binding protein NKRF-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF930VLP https://www.encodeproject.org/files/ENCFF930VLP/@@download/ENCFF930VLP.bam ENCFF528GXJ https://www.encodeproject.org/files/ENCFF528GXJ/@@download/ENCFF528GXJ.bam 75.6 M 0 73.2 M 0.968 PE 100 100 native 31.0 M 0.0 M 29.8 M 0.788 0.96 0.96 26.78 180 1.06 4.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/19ae5419-d09f-47a6-b634-3e97bb68c937/@@download/cross_correlation_plot/ENCFF455JSWENCFF635AXD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB610MQI michael-snyder:L-3447 "ENCFF455JSW,ENCFF635AXD" HiSeq 4000 2017-05-05T22:31:17.377572+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469v0803698KGf370q9770b ENCSR000EEH https://www.encodeproject.org/experiments/ENCSR000EEH transcription factor NRF1-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF787RXW https://www.encodeproject.org/files/ENCFF787RXW/@@download/ENCFF787RXW.bam ENCFF559RYJ https://www.encodeproject.org/files/ENCFF559RYJ/@@download/ENCFF559RYJ.bam 27.8 M 0 22.4 M 0.806 SE 36 36 native 0.0 M 16.8 M 15.4 M 0.554 0.92 0.92 11.69 130 1.03 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f629820-f7d9-4faf-ad32-8f6fbfcfac78/@@download/cross_correlation_plot/ENCFF000XVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAH ENCFF000XVP Illumina Genome Analyzer 2016-12-11T03:25:51.943577+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164XYQ03697yz601ypVJ3JX ENCSR000EEH https://www.encodeproject.org/experiments/ENCSR000EEH transcription factor NRF1-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF101XWQ https://www.encodeproject.org/files/ENCFF101XWQ/@@download/ENCFF101XWQ.bam ENCFF991AEO https://www.encodeproject.org/files/ENCFF991AEO/@@download/ENCFF991AEO.bam 28.5 M 0 22.7 M 0.798 SE 36 36 native 0.0 M 16.2 M 15.7 M 0.552 0.97 0.97 34.56 125 1.03 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/92f64c6b-c655-493d-8b2d-3b656f517397/@@download/cross_correlation_plot/ENCFF000XVR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANM ENCFF000XVR Illumina Genome Analyzer 2016-12-11T03:30:59.237851+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Xj803699Z3Y8493qbq37 ENCSR648HOY https://www.encodeproject.org/experiments/ENCSR648HOY transcription factor PAX8-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR170DNV https://www.encodeproject.org/experiments/ENCSR170DNV transcription factor PHB2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF871QFB https://www.encodeproject.org/files/ENCFF871QFB/@@download/ENCFF871QFB.bam ENCFF709URW https://www.encodeproject.org/files/ENCFF709URW/@@download/ENCFF709URW.bam 63.1 M 0 61.0 M 0.966 PE 100 100 native 25.4 M 0.0 M 25.1 M 0.796 0.99 0.99 82.56 200 1.06 4.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/74e7119a-18e1-4701-8cc8-a3313fde00fe/@@download/cross_correlation_plot/ENCFF799CJAENCFF445ODF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB634WSR michael-snyder:L-2133 "ENCFF445ODF,ENCFF799CJA" HiSeq 2000 2016-10-09T17:14:49.202602+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40p80jv1XvFGkBjjfjQ69 ENCSR170DNV https://www.encodeproject.org/experiments/ENCSR170DNV transcription factor PHB2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF904HKQ https://www.encodeproject.org/files/ENCFF904HKQ/@@download/ENCFF904HKQ.bam ENCFF857TCB https://www.encodeproject.org/files/ENCFF857TCB/@@download/ENCFF857TCB.bam 62.3 M 0 60.2 M 0.966 PE 100 100 native 25.1 M 0.0 M 24.9 M 0.799 0.99 0.99 104.52 205 1.06 4.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8eca101-4077-4711-bf5e-282458251bc0/@@download/cross_correlation_plot/ENCFF957SQJENCFF700HWC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB904XDI michael-snyder:L-2134 "ENCFF957SQJ,ENCFF700HWC" HiSeq 2000 2016-10-09T17:16:23.593529+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40v00jv1QxJBfj5Zb2pXF ENCSR071NZK https://www.encodeproject.org/experiments/ENCSR071NZK transcription factor PKNOX1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF917YXN https://www.encodeproject.org/files/ENCFF917YXN/@@download/ENCFF917YXN.bam ENCFF965DHD https://www.encodeproject.org/files/ENCFF965DHD/@@download/ENCFF965DHD.bam 51.0 M 0 49.7 M 0.975 PE 100 100 native 21.6 M 0.0 M 21.1 M 0.827 0.98 0.98 42.80 205 1.77 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/3db6ac63-59ba-458f-839d-22412afdd563/@@download/cross_correlation_plot/ENCFF468MJVENCFF987UCE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB849DKZ michael-snyder:L-2605 "ENCFF468MJV,ENCFF987UCE" HiSeq 2000 2017-02-01T18:18:48.982605+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28Q07Q036956KvB3zF9YZ6K ENCSR071NZK https://www.encodeproject.org/experiments/ENCSR071NZK transcription factor PKNOX1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF981PAA https://www.encodeproject.org/files/ENCFF981PAA/@@download/ENCFF981PAA.bam ENCFF692ZVJ https://www.encodeproject.org/files/ENCFF692ZVJ/@@download/ENCFF692ZVJ.bam 49.7 M 0 48.2 M 0.969 PE 100 100 native 20.4 M 0.0 M 20.4 M 0.819 1.00 1.00 288.60 210 1.09 3.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/07534708-892a-404d-a3e4-53c8b56b8f1c/@@download/cross_correlation_plot/ENCFF698MZTENCFF488DBG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB990YVR michael-snyder:L-2606 "ENCFF698MZT,ENCFF488DBG" HiSeq 2000 2017-02-01T18:18:26.311171+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28Q0Xj03694P27X31BfpJ87 ENCSR000EEQ https://www.encodeproject.org/experiments/ENCSR000EEQ "RNA binding protein,transcription factor" PPARGC1A-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR414VZY https://www.encodeproject.org/experiments/ENCSR414VZY transcription factor PRPF4B-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF488ABN https://www.encodeproject.org/files/ENCFF488ABN/@@download/ENCFF488ABN.bam ENCFF057AKB https://www.encodeproject.org/files/ENCFF057AKB/@@download/ENCFF057AKB.bam 114.9 M 0 109.6 M 0.954 PE 100 100 native 46.9 M 0.0 M 43.5 M 0.756 0.93 0.93 13.35 220 1.04 3.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/34631ceb-dbd3-499e-9f40-5e7f6d177eb9/@@download/cross_correlation_plot/ENCFF470CZOENCFF137YAV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB218HXO michael-snyder:L-2099 "ENCFF137YAV,ENCFF470CZO" HiSeq 4000 2016-09-16T03:23:15.469197+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyQqQ0369J6bkz8ZJ7qy8Z ENCSR414VZY https://www.encodeproject.org/experiments/ENCSR414VZY transcription factor PRPF4B-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF222XCD https://www.encodeproject.org/files/ENCFF222XCD/@@download/ENCFF222XCD.bam ENCFF252RXZ https://www.encodeproject.org/files/ENCFF252RXZ/@@download/ENCFF252RXZ.bam 241.4 M 0 231.5 M 0.959 PE 100 100 native 98.0 M 0.0 M 92.7 M 0.768 0.95 0.95 18.55 200 1.02 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/6dd90d9a-1cf7-4479-8b0c-89fcb07b5190/@@download/cross_correlation_plot/ENCFF312XKQENCFF868WLZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB876JWR michael-snyder:L-2100 "ENCFF868WLZ,ENCFF312XKQ" HiSeq 4000 2016-09-16T03:32:26.851008+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyQy80369PzXj14kJK8Ky1 ENCSR822EJN https://www.encodeproject.org/experiments/ENCSR822EJN transcription factor PYGO2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF343EYJ https://www.encodeproject.org/files/ENCFF343EYJ/@@download/ENCFF343EYJ.bam ENCFF703STV https://www.encodeproject.org/files/ENCFF703STV/@@download/ENCFF703STV.bam 60.3 M 0 58.3 M 0.967 PE 100 100 native 25.0 M 0.0 M 24.7 M 0.819 0.99 0.99 74.48 195 1.07 3.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ae6ee49-ebf1-45da-81c8-69f4a1996a9a/@@download/cross_correlation_plot/ENCFF339DMXENCFF656TGA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB486GTN michael-snyder:L-2607 "ENCFF339DMX,ENCFF656TGA" HiSeq 2000 2016-09-16T03:20:42.208056+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGybX80369PzXj14kJK8P0j ENCSR822EJN https://www.encodeproject.org/experiments/ENCSR822EJN transcription factor PYGO2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF131HGG https://www.encodeproject.org/files/ENCFF131HGG/@@download/ENCFF131HGG.bam ENCFF052JTZ https://www.encodeproject.org/files/ENCFF052JTZ/@@download/ENCFF052JTZ.bam 78.7 M 0 74.9 M 0.951 PE 100 100 native 32.0 M 0.0 M 31.4 M 0.798 0.98 0.98 61.03 155 1.07 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/06457dd5-d850-44f2-a1b3-8fc87f82536b/@@download/cross_correlation_plot/ENCFF105XQZENCFF712RRZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB757YQN michael-snyder:L-2608 "ENCFF105XQZ,ENCFF712RRZ" HiSeq 2000 2016-09-16T03:22:59.568370+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGybbj03696x9VJV48y49x9 ENCSR000EEG https://www.encodeproject.org/experiments/ENCSR000EEG transcription factor RAD21-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF200JRU https://www.encodeproject.org/files/ENCFF200JRU/@@download/ENCFF200JRU.bam ENCFF143MIJ https://www.encodeproject.org/files/ENCFF143MIJ/@@download/ENCFF143MIJ.bam 27.4 M 0 22.8 M 0.831 SE 36 36 native 0.0 M 17.3 M 16.7 M 0.609 0.97 0.97 36.50 120 1.47 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca2d19ba-bde3-4ec4-896f-6dcc456e1e20/@@download/cross_correlation_plot/ENCFF000XXK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJS ENCFF000XXK Illumina Genome Analyzer 2016-12-10T20:26:26.180235+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Ygj03697xKX68qyy2k60 ENCSR000EEG https://www.encodeproject.org/experiments/ENCSR000EEG transcription factor RAD21-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF942GFS https://www.encodeproject.org/files/ENCFF942GFS/@@download/ENCFF942GFS.bam ENCFF461CLC https://www.encodeproject.org/files/ENCFF461CLC/@@download/ENCFF461CLC.bam 22.6 M 0 20.2 M 0.894 SE 36 36 native 0.0 M 15.6 M 15.0 M 0.665 0.97 0.97 37.87 120 1.72 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/846691f0-de6d-49b7-a799-eb451d292f7f/@@download/cross_correlation_plot/ENCFF000XXL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASJ ENCFF000XXL Illumina Genome Analyzer 2016-12-10T20:22:09.575095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Yvj0369BV55708G9qb93 ENCSR000EDQ https://www.encodeproject.org/experiments/ENCSR000EDQ transcription factor RCOR1-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF807TIN https://www.encodeproject.org/files/ENCFF807TIN/@@download/ENCFF807TIN.bam ENCFF387LRB https://www.encodeproject.org/files/ENCFF387LRB/@@download/ENCFF387LRB.bam 30.1 M 0 29.5 M 0.981 SE 36 36 native 0.0 M 22.1 M 21.7 M 0.719 0.98 0.98 60.40 95 1.04 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/34c7dca3-9310-4313-bb68-188dbe4815df/@@download/cross_correlation_plot/ENCFF000XQW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJD ENCFF000XQW Illumina Genome Analyzer 2016-12-11T03:59:42.422312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164v8Q0369PvYp91zK1PxJ2 ENCSR000EDQ https://www.encodeproject.org/experiments/ENCSR000EDQ transcription factor RCOR1-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF535OVY https://www.encodeproject.org/files/ENCFF535OVY/@@download/ENCFF535OVY.bam ENCFF353CSF https://www.encodeproject.org/files/ENCFF353CSF/@@download/ENCFF353CSF.bam 30.2 M 0 29.2 M 0.968 SE 36 36 native 0.0 M 22.2 M 21.8 M 0.723 0.99 0.99 81.77 85 1.02 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f3aef72-7995-4d6a-a522-283b6f6e707f/@@download/cross_correlation_plot/ENCFF000XQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVI ENCFF000XQY Illumina Genome Analyzer 2016-12-11T04:01:39.759919+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164vJ00369KbxV61z4GFvP6 ENCSR000EEA https://www.encodeproject.org/experiments/ENCSR000EEA transcription factor RFX5-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF569JCK https://www.encodeproject.org/files/ENCFF569JCK/@@download/ENCFF569JCK.bam ENCFF321PFO https://www.encodeproject.org/files/ENCFF321PFO/@@download/ENCFF321PFO.bam 31.9 M 0 28.5 M 0.893 SE 36 36 native 0.0 M 21.4 M 20.1 M 0.629 0.94 0.96 25.37 115 1.11 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffe690c8-465f-496a-8f5e-248e33acb959/@@download/cross_correlation_plot/ENCFF000XXZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGX ENCFF000XXZ Illumina Genome Analyzer 2016-12-11T04:15:47.944244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165JX803695yqvv8q311QQ8 ENCSR000EEA https://www.encodeproject.org/experiments/ENCSR000EEA transcription factor RFX5-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF380VYQ https://www.encodeproject.org/files/ENCFF380VYQ/@@download/ENCFF380VYQ.bam ENCFF743FPG https://www.encodeproject.org/files/ENCFF743FPG/@@download/ENCFF743FPG.bam 28.0 M 0 25.7 M 0.916 SE 36 36 native 0.0 M 18.8 M 18.0 M 0.640 0.96 0.97 41.08 135 1.11 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6f80a3b-1c00-440b-9d01-a21e846d16e6/@@download/cross_correlation_plot/ENCFF000XXX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAJ ENCFF000XXX Illumina Genome Analyzer 2016-12-11T04:13:50.181949+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Jg80369BJyPz9fb9qYBk ENCSR452YHM https://www.encodeproject.org/experiments/ENCSR452YHM transcription factor SIN3B-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF459UCK https://www.encodeproject.org/files/ENCFF459UCK/@@download/ENCFF459UCK.bam ENCFF779HZW https://www.encodeproject.org/files/ENCFF779HZW/@@download/ENCFF779HZW.bam 30.9 M 0 30.4 M 0.983 SE 36 36 native 0.0 M 23.7 M 22.6 M 0.732 0.96 0.96 25.69 125 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe996560-069d-47a4-89a7-6bd038fd717e/@@download/cross_correlation_plot/ENCFF002EDW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB165BOU michael-snyder:Sin3B_sc-13145_HepG2_Rep1 ENCFF002EDW Illumina Genome Analyzer IIx 2016-10-09T17:02:29.447476+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66J80jv1q5825v91XY317 ENCSR452YHM https://www.encodeproject.org/experiments/ENCSR452YHM transcription factor SIN3B-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF125NKO https://www.encodeproject.org/files/ENCFF125NKO/@@download/ENCFF125NKO.bam ENCFF004EMX https://www.encodeproject.org/files/ENCFF004EMX/@@download/ENCFF004EMX.bam 35.1 M 0 34.1 M 0.972 SE 36 36 native 0.0 M 25.9 M 25.1 M 0.715 0.97 0.97 35.72 95 1.05 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/2234bdc4-a8a9-4e58-a383-65d7091f66de/@@download/cross_correlation_plot/ENCFF002EDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB320JAS michael-snyder:Sin3B_sc-13145_HepG2_Rep2 ENCFF002EDY Illumina Genome Analyzer IIx 2016-10-09T17:01:47.928193+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66P80jv1bJQB62j8VV6PB ENCSR754MUD https://www.encodeproject.org/experiments/ENCSR754MUD transcription factor SKI-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF975MAG https://www.encodeproject.org/files/ENCFF975MAG/@@download/ENCFF975MAG.bam ENCFF138KOR https://www.encodeproject.org/files/ENCFF138KOR/@@download/ENCFF138KOR.bam 75.7 M 0 74.9 M 0.989 PE 100 100 native 33.7 M 0.0 M 28.7 M 0.758 0.85 0.85 6.35 220 1.12 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e16f6cc-c986-4f8d-9f5c-dff12d1fa5dc/@@download/cross_correlation_plot/ENCFF718GJYENCFF378WJL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB176NBL michael-snyder:L-427 "ENCFF378WJL,ENCFF718GJY" HiSeq 2000 2016-10-09T17:05:51.345666+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6QVQ0jv1fJXkp34kpvK3G ENCSR754MUD https://www.encodeproject.org/experiments/ENCSR754MUD transcription factor SKI-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF527HHS https://www.encodeproject.org/files/ENCFF527HHS/@@download/ENCFF527HHS.bam ENCFF066GME https://www.encodeproject.org/files/ENCFF066GME/@@download/ENCFF066GME.bam 47.4 M 0 46.4 M 0.979 PE 100 100 native 20.4 M 0.0 M 20.0 M 0.844 0.98 0.98 46.45 195 1.20 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e7f2ad9-bfa3-4b93-9aa3-6d14f049c92c/@@download/cross_correlation_plot/ENCFF882DKXENCFF023JKK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB637FEC michael-snyder:L-137 "ENCFF023JKK,ENCFF882DKX" HiSeq 2000 2016-10-09T17:03:29.126165+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6QZ00jv1Zx550yGy68YZb ENCSR656WTI https://www.encodeproject.org/experiments/ENCSR656WTI transcription factor SKIL-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF432DVQ https://www.encodeproject.org/files/ENCFF432DVQ/@@download/ENCFF432DVQ.bam ENCFF151AFK https://www.encodeproject.org/files/ENCFF151AFK/@@download/ENCFF151AFK.bam 63.2 M 0 59.1 M 0.935 PE 100 100 native 25.2 M 0.0 M 24.5 M 0.776 0.97 0.97 39.66 215 1.06 4.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e712f59-a2f2-498e-b9f8-50ab6584dba8/@@download/cross_correlation_plot/ENCFF565QBQENCFF971GNA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB937WQP michael-snyder:L-2201 "ENCFF971GNA,ENCFF565QBQ" HiSeq 2000 2016-10-09T17:39:14.288634+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5pkj0jv1XpBpGXQxqxY95 ENCSR656WTI https://www.encodeproject.org/experiments/ENCSR656WTI transcription factor SKIL-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF014OZJ https://www.encodeproject.org/files/ENCFF014OZJ/@@download/ENCFF014OZJ.bam ENCFF532TQO https://www.encodeproject.org/files/ENCFF532TQO/@@download/ENCFF532TQO.bam 72.4 M 0 67.8 M 0.936 PE 100 100 native 29.0 M 0.0 M 28.1 M 0.777 0.97 0.97 35.72 205 1.05 4.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/7852edc4-b28b-45fb-9e5a-92cd0285476d/@@download/cross_correlation_plot/ENCFF610TPEENCFF709XSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB440JNQ michael-snyder:L-2202 "ENCFF709XSX,ENCFF610TPE" HiSeq 2000 2016-10-09T17:40:41.395799+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5pqj0jv1f6Kg8jbGjKZFF ENCSR217JXX https://www.encodeproject.org/experiments/ENCSR217JXX "RNA binding protein,transcription factor" SNIP1-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR917JYN https://www.encodeproject.org/experiments/ENCSR917JYN "RNA binding protein,transcription factor" TARDBP-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF666GRA https://www.encodeproject.org/files/ENCFF666GRA/@@download/ENCFF666GRA.bam ENCFF170IET https://www.encodeproject.org/files/ENCFF170IET/@@download/ENCFF170IET.bam 115.7 M 0 105.2 M 0.909 PE 100 100 native 42.1 M 0.0 M 38.3 M 0.663 0.91 0.91 11.38 215 1.08 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/055e85c7-dd35-42f9-901f-efb5001c3f2b/@@download/cross_correlation_plot/ENCFF888IZPENCFF648BTK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB224OXO michael-snyder:L-2205 "ENCFF888IZP,ENCFF648BTK" HiSeq 4000 2016-09-16T03:24:04.203087+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyQbQ0369B06vx3GQPgx54 ENCSR917JYN https://www.encodeproject.org/experiments/ENCSR917JYN "RNA binding protein,transcription factor" TARDBP-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF395OLH https://www.encodeproject.org/files/ENCFF395OLH/@@download/ENCFF395OLH.bam ENCFF319AUC https://www.encodeproject.org/files/ENCFF319AUC/@@download/ENCFF319AUC.bam 87.1 M 0 83.1 M 0.954 PE 100 100 native 34.5 M 0.0 M 33.0 M 0.758 0.96 0.96 23.90 210 1.05 3.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/0866f462-504d-4320-adf8-153a2f18e9a8/@@download/cross_correlation_plot/ENCFF820CHJENCFF494GDI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712EOK michael-snyder:L-2206 "ENCFF494GDI,ENCFF820CHJ" HiSeq 4000 2016-09-16T03:21:26.312833+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyQj8036903vFQkJzV6PjF ENCSR101FJS https://www.encodeproject.org/experiments/ENCSR101FJS transcription factor TBL1XR1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF628OYH https://www.encodeproject.org/files/ENCFF628OYH/@@download/ENCFF628OYH.bam ENCFF205XZW https://www.encodeproject.org/files/ENCFF205XZW/@@download/ENCFF205XZW.bam 29.9 M 0 29.2 M 0.975 SE 36 36 native 0.0 M 22.5 M 21.6 M 0.722 0.96 0.96 28.19 130 1.05 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bc4c235-9531-41a4-8593-c39a2a8f587c/@@download/cross_correlation_plot/ENCFF001YXI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ADC ENCFF001YXI Illumina Genome Analyzer IIx 2016-10-29T18:00:14.919961+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B28jj0jv1vy59VJQ1KqP6g ENCSR101FJS https://www.encodeproject.org/experiments/ENCSR101FJS transcription factor TBL1XR1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF230PAS https://www.encodeproject.org/files/ENCFF230PAS/@@download/ENCFF230PAS.bam ENCFF327OYV https://www.encodeproject.org/files/ENCFF327OYV/@@download/ENCFF327OYV.bam 27.4 M 0 27.0 M 0.986 SE 36 36 native 0.0 M 19.9 M 19.4 M 0.708 0.98 0.98 42.41 115 1.03 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb0439f6-ecaa-4b4d-b3ef-5deb751e92b1/@@download/cross_correlation_plot/ENCFF001YXJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ADD ENCFF001YXJ Illumina Genome Analyzer IIx 2016-10-29T17:59:57.381424+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B28x80jv1pj2bF0JP9K2ff ENCSR000EEL https://www.encodeproject.org/experiments/ENCSR000EEL transcription factor TBP-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF956OLR https://www.encodeproject.org/files/ENCFF956OLR/@@download/ENCFF956OLR.bam ENCFF570NNG https://www.encodeproject.org/files/ENCFF570NNG/@@download/ENCFF570NNG.bam 28.4 M 0 22.8 M 0.801 SE 36 36 native 0.0 M 16.3 M 15.6 M 0.549 0.96 0.97 46.34 140 1.20 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/f20f19ed-5103-4f2e-a3c9-f8c6ca561a91/@@download/cross_correlation_plot/ENCFF000XZL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACC ENCFF000XZL Illumina Genome Analyzer 2016-12-12T17:21:52.543768+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1621VQ0369PJ8BP63qf1FVP ENCSR000EEL https://www.encodeproject.org/experiments/ENCSR000EEL transcription factor TBP-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF031LWP https://www.encodeproject.org/files/ENCFF031LWP/@@download/ENCFF031LWP.bam ENCFF966RQD https://www.encodeproject.org/files/ENCFF966RQD/@@download/ENCFF966RQD.bam 25.1 M 0 21.6 M 0.861 SE 36 36 native 0.0 M 15.5 M 14.8 M 0.590 0.96 0.97 48.90 140 1.27 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/71f9c6f6-5340-4ca9-ba7a-e275607dcb21/@@download/cross_correlation_plot/ENCFF000XZI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACD ENCFF000XZI Illumina Genome Analyzer 2016-12-12T17:21:07.565975+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1621bj0369Bxb30J6x5bYvV ENCSR238QRG https://www.encodeproject.org/experiments/ENCSR238QRG transcription factor TBX3-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF106TAT https://www.encodeproject.org/files/ENCFF106TAT/@@download/ENCFF106TAT.bam ENCFF121JNK https://www.encodeproject.org/files/ENCFF121JNK/@@download/ENCFF121JNK.bam 234.6 M 0 226.3 M 0.965 PE 100 100 native 97.3 M 0.0 M 87.4 M 0.745 0.90 0.90 9.81 250 1.03 3.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/36424a0c-f03f-4ec2-97d1-ed9ada283862/@@download/cross_correlation_plot/ENCFF388ZHDENCFF606KRS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB611SYU michael-snyder:L-1886 "ENCFF606KRS,ENCFF388ZHD" HiSeq 4000 2016-10-27T22:40:24.677760+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfqj03694q32PPxBJ6ZyZ ENCSR238QRG https://www.encodeproject.org/experiments/ENCSR238QRG transcription factor TBX3-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF228ZGU https://www.encodeproject.org/files/ENCFF228ZGU/@@download/ENCFF228ZGU.bam ENCFF479RQX https://www.encodeproject.org/files/ENCFF479RQX/@@download/ENCFF479RQX.bam 96.7 M 0 93.5 M 0.966 PE 100 100 native 39.9 M 0.0 M 37.8 M 0.781 0.95 0.95 18.62 235 1.05 3.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/54447326-0c60-4b62-8d7f-3cba6d9f429c/@@download/cross_correlation_plot/ENCFF845RNPENCFF642JDC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB802CQC michael-snyder:L-1887 "ENCFF642JDC,ENCFF845RNP" HiSeq 4000 2016-10-27T22:28:52.132243+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfz003697KPkyX9BPQF2X ENCSR506HXN https://www.encodeproject.org/experiments/ENCSR506HXN transcription factor TRIM22-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF172UCO https://www.encodeproject.org/files/ENCFF172UCO/@@download/ENCFF172UCO.bam ENCFF488IEY https://www.encodeproject.org/files/ENCFF488IEY/@@download/ENCFF488IEY.bam 65.5 M 0 63.1 M 0.964 PE 100 100 native 26.7 M 0.0 M 26.2 M 0.799 0.98 0.98 52.46 215 1.05 5.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/28f45d7d-5391-49bc-af26-53695a644c11/@@download/cross_correlation_plot/ENCFF115KHDENCFF110BCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB552SSN michael-snyder:L-2187 "ENCFF110BCH,ENCFF115KHD" HiSeq 2000 2016-10-09T17:37:06.212700+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62b80jv1qJ3fJpV1YPf94 ENCSR506HXN https://www.encodeproject.org/experiments/ENCSR506HXN transcription factor TRIM22-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF107HRF https://www.encodeproject.org/files/ENCFF107HRF/@@download/ENCFF107HRF.bam ENCFF541HKM https://www.encodeproject.org/files/ENCFF541HKM/@@download/ENCFF541HKM.bam 70.7 M 0 68.2 M 0.965 PE 100 100 native 29.0 M 0.0 M 28.4 M 0.804 0.98 0.98 52.31 210 1.05 4.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/f29fb85a-dee2-4e91-9bd1-5e216e5e39ae/@@download/cross_correlation_plot/ENCFF521TTLENCFF156BTH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB692JIY michael-snyder:L-2188 "ENCFF156BTH,ENCFF521TTL" HiSeq 2000 2016-10-09T17:39:51.331616+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62g80jv1qJ3fJpV1YPf9J ENCSR000EEF https://www.encodeproject.org/experiments/ENCSR000EEF transcription factor USF2-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF782OFZ https://www.encodeproject.org/files/ENCFF782OFZ/@@download/ENCFF782OFZ.bam ENCFF500IDY https://www.encodeproject.org/files/ENCFF500IDY/@@download/ENCFF500IDY.bam 30.4 M 0 23.3 M 0.765 SE 36 36 native 0.0 M 16.4 M 16.1 M 0.527 0.98 0.98 60.13 115 1.09 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a08ad12-70b0-4afe-8659-aaf59aa8f6d7/@@download/cross_correlation_plot/ENCFF000XZT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJL ENCFF000XZT Illumina Genome Analyzer 2016-12-11T04:38:11.500463+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165kj00369KbxV61z4GFvgg ENCSR000EEF https://www.encodeproject.org/experiments/ENCSR000EEF transcription factor USF2-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF411RHI https://www.encodeproject.org/files/ENCFF411RHI/@@download/ENCFF411RHI.bam ENCFF898OAK https://www.encodeproject.org/files/ENCFF898OAK/@@download/ENCFF898OAK.bam 44.2 M 0 38.8 M 0.880 SE 36 36 native 0.0 M 27.7 M 27.2 M 0.616 0.98 0.99 82.94 115 1.06 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/d14b0a20-3b18-4b51-9946-5b1a601e5a42/@@download/cross_correlation_plot/ENCFF000XZV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMM ENCFF000XZV Illumina Genome Analyzer 2016-12-11T04:48:20.991122+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165kx80369BJyPz9fb9qYJg ENCSR799GOY https://www.encodeproject.org/experiments/ENCSR799GOY "RNA binding protein,transcription factor" YBX1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF973ZYR https://www.encodeproject.org/files/ENCFF973ZYR/@@download/ENCFF973ZYR.bam ENCFF169IAY https://www.encodeproject.org/files/ENCFF169IAY/@@download/ENCFF169IAY.bam 78.7 M 0 73.7 M 0.937 PE 100 100 native 31.1 M 0.0 M 30.3 M 0.769 0.97 0.97 38.70 205 1.05 4.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b643ade-9c03-4cfc-9a23-96f640692bbf/@@download/cross_correlation_plot/ENCFF611YHUENCFF681FMI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830AOA michael-snyder:L-2195 "ENCFF611YHU,ENCFF681FMI" HiSeq 2000 2016-10-09T17:08:19.135859+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4X8j0jv1XvFGkBjjfjQp6 ENCSR799GOY https://www.encodeproject.org/experiments/ENCSR799GOY "RNA binding protein,transcription factor" YBX1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF687IOA https://www.encodeproject.org/files/ENCFF687IOA/@@download/ENCFF687IOA.bam ENCFF025KYQ https://www.encodeproject.org/files/ENCFF025KYQ/@@download/ENCFF025KYQ.bam 76.7 M 0 71.2 M 0.928 PE 100 100 native 30.2 M 0.0 M 29.2 M 0.761 0.97 0.97 30.80 200 1.05 3.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/206e9323-63a0-475b-bdb7-015872207a15/@@download/cross_correlation_plot/ENCFF112QGYENCFF659TEJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB724OTH michael-snyder:L-2196 "ENCFF659TEJ,ENCFF112QGY" HiSeq 2000 2016-10-09T17:07:27.249783+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XBQ0jv1xPyfX78Yz4jG7 ENCSR525YFS https://www.encodeproject.org/experiments/ENCSR525YFS transcription factor ZBTB40-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF623YND https://www.encodeproject.org/files/ENCFF623YND/@@download/ENCFF623YND.bam ENCFF186RIK https://www.encodeproject.org/files/ENCFF186RIK/@@download/ENCFF186RIK.bam 74.1 M 0 71.8 M 0.968 PE 100 100 native 30.8 M 0.0 M 29.5 M 0.795 0.96 0.96 23.60 195 1.10 2.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/02182dd3-7458-4067-82a4-bff2dc8ff86d/@@download/cross_correlation_plot/ENCFF802HNQENCFF954DSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB262FQK michael-snyder:L-1900 "ENCFF954DSX,ENCFF802HNQ" HiSeq 2000 2016-10-09T17:34:35.705276+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5xk80jv1v69xp00g4J2V9 ENCSR525YFS https://www.encodeproject.org/experiments/ENCSR525YFS transcription factor ZBTB40-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF247NIG https://www.encodeproject.org/files/ENCFF247NIG/@@download/ENCFF247NIG.bam ENCFF534NHJ https://www.encodeproject.org/files/ENCFF534NHJ/@@download/ENCFF534NHJ.bam 82.5 M 0 80.4 M 0.974 PE 100 100 native 34.7 M 0.0 M 33.8 M 0.819 0.97 0.97 38.09 195 1.07 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c9ae7e3-8439-4bb0-a29e-cd689c3d512a/@@download/cross_correlation_plot/ENCFF827PIQENCFF949SIP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB666OIM michael-snyder:L-1901 "ENCFF827PIQ,ENCFF949SIP" HiSeq 2000 2016-10-09T17:34:34.404291+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5xqQ0jv1b6Q2yZ51Zb5Jv ENCSR282KAF https://www.encodeproject.org/experiments/ENCSR282KAF transcription factor ZBTB7B-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF026UEF https://www.encodeproject.org/files/ENCFF026UEF/@@download/ENCFF026UEF.bam ENCFF223AJZ https://www.encodeproject.org/files/ENCFF223AJZ/@@download/ENCFF223AJZ.bam 65.1 M 0 63.3 M 0.972 PE 100 100 native 27.2 M 0.0 M 27.0 M 0.828 0.99 0.99 123.52 190 1.06 3.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/814262a9-6a3d-42c2-9cd9-9e3cb1013ba8/@@download/cross_correlation_plot/ENCFF773SQVENCFF948APK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB183XOE michael-snyder:L-2609 "ENCFF948APK,ENCFF773SQV" HiSeq 2000 2016-09-16T03:21:04.057319+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGybkj0369Fv9Fbyj2z3Q10 ENCSR282KAF https://www.encodeproject.org/experiments/ENCSR282KAF transcription factor ZBTB7B-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF883CPF https://www.encodeproject.org/files/ENCFF883CPF/@@download/ENCFF883CPF.bam ENCFF039BFL https://www.encodeproject.org/files/ENCFF039BFL/@@download/ENCFF039BFL.bam 60.4 M 0 58.8 M 0.973 PE 100 100 native 25.3 M 0.0 M 24.9 M 0.823 0.98 0.98 57.43 190 1.07 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/1842de99-4f2f-438f-a79b-fde9799e4080/@@download/cross_correlation_plot/ENCFF067ABHENCFF716DON.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB248ASY michael-snyder:L-2610 "ENCFF716DON,ENCFF067ABH" HiSeq 2000 2016-09-16T03:20:56.009962+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGybvQ0369GZQjPPJb6P0fZ ENCSR382XLA https://www.encodeproject.org/experiments/ENCSR382XLA "RNA binding protein,transcription factor" ZFP36-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF015EFN https://www.encodeproject.org/files/ENCFF015EFN/@@download/ENCFF015EFN.bam ENCFF572AWW https://www.encodeproject.org/files/ENCFF572AWW/@@download/ENCFF572AWW.bam 24.8 M 0 24.2 M 0.977 SE 36 36 native 0.0 M 18.3 M 17.7 M 0.712 0.96 0.96 28.11 100 1.02 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/18870eaa-8eb2-4ea6-bf70-1ef9419259b6/@@download/cross_correlation_plot/ENCFF002EVO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB866IRQ michael-snyder:ZFP36_T5327_HepG2_Rep2 ENCFF002EVO Illumina Genome Analyzer IIx 2016-10-09T17:09:36.812214+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3v100jv1XvFGkBjjfjQ1J ENCSR382XLA https://www.encodeproject.org/experiments/ENCSR382XLA "RNA binding protein,transcription factor" ZFP36-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF654JAY https://www.encodeproject.org/files/ENCFF654JAY/@@download/ENCFF654JAY.bam ENCFF089ZBM https://www.encodeproject.org/files/ENCFF089ZBM/@@download/ENCFF089ZBM.bam 30.6 M 0 30.3 M 0.990 SE 36 36 native 0.0 M 23.2 M 22.7 M 0.740 0.98 0.98 44.08 110 1.03 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/edb6f638-e697-43cd-8d12-5ca5d62a53cc/@@download/cross_correlation_plot/ENCFF002EVX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB318DYW michael-snyder:ZFP36_T5327_HepG2_Rep3 ENCFF002EVX Illumina Genome Analyzer IIx 2016-10-09T17:09:47.336484+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3v280jv1f60PxyZ9JGKx6 ENCSR157CAU https://www.encodeproject.org/experiments/ENCSR157CAU transcription factor ZKSCAN1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF883UVV https://www.encodeproject.org/files/ENCFF883UVV/@@download/ENCFF883UVV.bam ENCFF245SLR https://www.encodeproject.org/files/ENCFF245SLR/@@download/ENCFF245SLR.bam 35.2 M 0 34.9 M 0.991 SE 36 36 native 0.0 M 26.8 M 25.9 M 0.736 0.97 0.97 34.38 120 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/070d6928-28ce-4476-844f-f53929344187/@@download/cross_correlation_plot/ENCFF002EEG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB784GTR michael-snyder:ZKSCAN1_HPA006672_HepG2_Rep1 ENCFF002EEG Illumina Genome Analyzer IIx 2016-10-09T17:02:07.838341+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4PJj0jv1XYYX2Fxk3f5PY ENCSR157CAU https://www.encodeproject.org/experiments/ENCSR157CAU transcription factor ZKSCAN1-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF641NQL https://www.encodeproject.org/files/ENCFF641NQL/@@download/ENCFF641NQL.bam ENCFF871SLH https://www.encodeproject.org/files/ENCFF871SLH/@@download/ENCFF871SLH.bam 30.7 M 0 30.4 M 0.991 SE 36 36 native 0.0 M 23.1 M 22.6 M 0.736 0.98 0.98 55.18 100 1.05 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/32941941-8a8c-43c1-a501-0586567c1d17/@@download/cross_correlation_plot/ENCFF002EEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB385BLP michael-snyder:ZKSCAN1_HPA006672_HepG2_Rep3 ENCFF002EEH Illumina Genome Analyzer IIx 2016-10-09T17:01:54.747938+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4PP80jv1XYYX2Fxk3f5Pv ENCSR101FJT https://www.encodeproject.org/experiments/ENCSR101FJT transcription factor ZNF143-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF680GYM https://www.encodeproject.org/files/ENCFF680GYM/@@download/ENCFF680GYM.bam ENCFF026TDC https://www.encodeproject.org/files/ENCFF026TDC/@@download/ENCFF026TDC.bam 27.7 M 0 27.2 M 0.981 SE 36 36 native 0.0 M 21.2 M 19.7 M 0.710 0.93 0.95 23.87 120 1.26 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e9d4ee7-556f-42c6-9859-aa9df974ab1b/@@download/cross_correlation_plot/ENCFF001YXF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ADE ENCFF001YXF Illumina Genome Analyzer IIx 2016-10-09T17:00:27.613133+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4VBQ0jv1XYYX2Fxk3f5X8 ENCSR101FJT https://www.encodeproject.org/experiments/ENCSR101FJT transcription factor ZNF143-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF113VXD https://www.encodeproject.org/files/ENCFF113VXD/@@download/ENCFF113VXD.bam ENCFF904FVO https://www.encodeproject.org/files/ENCFF904FVO/@@download/ENCFF904FVO.bam 28.3 M 0 27.7 M 0.981 SE 36 36 native 0.0 M 21.0 M 19.2 M 0.678 0.92 0.94 21.14 120 1.33 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/10f1eb39-bc4e-499f-a7cb-597e6c0fa308/@@download/cross_correlation_plot/ENCFF001YXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ADF ENCFF001YXH Illumina Genome Analyzer IIx 2016-10-09T17:00:44.429637+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4VG80jv1f60PxyZ9JGPPY ENCSR683CSF https://www.encodeproject.org/experiments/ENCSR683CSF transcription factor ZNF207-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF447SWP https://www.encodeproject.org/files/ENCFF447SWP/@@download/ENCFF447SWP.bam ENCFF323YRS https://www.encodeproject.org/files/ENCFF323YRS/@@download/ENCFF323YRS.bam 120.5 M 0 115.7 M 0.960 PE 100 100 native 49.1 M 0.0 M 47.6 M 0.791 0.97 0.97 33.91 220 1.04 2.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7a74b15-7dcb-47a7-a190-362205aa7f9a/@@download/cross_correlation_plot/ENCFF888IQKENCFF239IAD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB456KGH michael-snyder:L-1784 "ENCFF888IQK,ENCFF239IAD" HiSeq 4000 2016-09-16T03:25:42.689403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyX680369Fv9Fbyj2z3PzB ENCSR683CSF https://www.encodeproject.org/experiments/ENCSR683CSF transcription factor ZNF207-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF024FHS https://www.encodeproject.org/files/ENCFF024FHS/@@download/ENCFF024FHS.bam ENCFF053ZIW https://www.encodeproject.org/files/ENCFF053ZIW/@@download/ENCFF053ZIW.bam 70.6 M 0 67.3 M 0.954 PE 100 100 native 28.2 M 0.0 M 27.0 M 0.764 0.96 0.96 23.49 245 1.05 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c0ef2b4-bad6-4956-8c05-aff655f77390/@@download/cross_correlation_plot/ENCFF638EKMENCFF649RQR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB029DNY michael-snyder:L-1785 "ENCFF638EKM,ENCFF649RQR" HiSeq 4000 2016-09-16T03:19:55.488263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXB00369J6bkz8ZJ7qyB1 ENCSR362NWP https://www.encodeproject.org/experiments/ENCSR362NWP transcription factor ZNF24-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF364EXI https://www.encodeproject.org/files/ENCFF364EXI/@@download/ENCFF364EXI.bam ENCFF620MCO https://www.encodeproject.org/files/ENCFF620MCO/@@download/ENCFF620MCO.bam 92.4 M 0 84.1 M 0.910 PE 100 100 native 36.2 M 0.0 M 33.0 M 0.713 0.91 0.91 10.92 160 1.10 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef357eec-d0c8-48a4-b3c7-f398a21df4e6/@@download/cross_correlation_plot/ENCFF814CIFENCFF860HSN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB755WIT michael-snyder:L-3515 "ENCFF814CIF,ENCFF860HSN" HiSeq 4000 2017-06-23T02:30:11.355897+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560bz0036957fYb30y1fF1z ENCSR362NWP https://www.encodeproject.org/experiments/ENCSR362NWP transcription factor ZNF24-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF195AYY https://www.encodeproject.org/files/ENCFF195AYY/@@download/ENCFF195AYY.bam ENCFF304DHX https://www.encodeproject.org/files/ENCFF304DHX/@@download/ENCFF304DHX.bam 80.2 M 0 72.7 M 0.907 PE 100 100 native 31.0 M 0.0 M 27.2 M 0.679 0.88 0.88 8.00 185 1.10 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa3e9903-711b-4767-afe7-ce93862656e2/@@download/cross_correlation_plot/ENCFF722QHDENCFF196OYG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB570MWZ michael-snyder:L-3516 "ENCFF722QHD,ENCFF196OYG" HiSeq 4000 2017-06-23T01:25:21.684710+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560f2j0369KvK6X31kB2jZq ENCSR791AGT https://www.encodeproject.org/experiments/ENCSR791AGT transcription factor ZNF24-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF525VML https://www.encodeproject.org/files/ENCFF525VML/@@download/ENCFF525VML.bam ENCFF622NWD https://www.encodeproject.org/files/ENCFF622NWD/@@download/ENCFF622NWD.bam 82.4 M 0 73.2 M 0.888 PE 100 100 native 30.7 M 0.0 M 18.4 M 0.447 0.60 0.61 2.62 255 1.09 4.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/257ba070-74a4-45c6-a2b5-6b9c722f9590/@@download/cross_correlation_plot/ENCFF674HOBENCFF162NSE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB244FXA michael-snyder:L-2615 "ENCFF162NSE,ENCFF674HOB" HiSeq 4000 2016-11-02T23:13:39.424984+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbF7j03691z1J9q5qKfbP6 ENCSR791AGT https://www.encodeproject.org/experiments/ENCSR791AGT transcription factor ZNF24-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF687AXX https://www.encodeproject.org/files/ENCFF687AXX/@@download/ENCFF687AXX.bam ENCFF599ACZ https://www.encodeproject.org/files/ENCFF599ACZ/@@download/ENCFF599ACZ.bam 289.9 M 0 275.4 M 0.950 PE 100 100 native 117.3 M 0.0 M 110.2 M 0.760 0.94 0.94 16.64 220 1.03 20.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/884976f4-b162-41f9-96f9-c7a500590deb/@@download/cross_correlation_plot/ENCFF622YPSENCFF859WEK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB669ZBT michael-snyder:L-2616 "ENCFF859WEK,ENCFF622YPS" HiSeq 4000 2016-11-07T21:41:32.103685+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbFJQ036943vz6fkqFkkP6 ENCSR841RWK https://www.encodeproject.org/experiments/ENCSR841RWK transcription factor ZSCAN29-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF995ZNS https://www.encodeproject.org/files/ENCFF995ZNS/@@download/ENCFF995ZNS.bam ENCFF685EKW https://www.encodeproject.org/files/ENCFF685EKW/@@download/ENCFF685EKW.bam 77.1 M 0 75.3 M 0.976 PE 100 100 native 32.1 M 0.0 M 29.7 M 0.770 0.93 0.93 14.01 180 1.07 4.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad40c307-fb1a-4277-9e3e-83d2b48db234/@@download/cross_correlation_plot/ENCFF501CASENCFF955LLL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB797OJQ michael-snyder:L-3434 "ENCFF955LLL,ENCFF501CAS" HiSeq 4000 2017-05-05T11:19:17.177287+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45zy380369KY6Jp7Gj1pfYQ ENCSR841RWK https://www.encodeproject.org/experiments/ENCSR841RWK transcription factor ZSCAN29-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF689XPG https://www.encodeproject.org/files/ENCFF689XPG/@@download/ENCFF689XPG.bam ENCFF284YVN https://www.encodeproject.org/files/ENCFF284YVN/@@download/ENCFF284YVN.bam 83.5 M 0 81.4 M 0.975 PE 100 100 native 35.2 M 0.0 M 30.9 M 0.741 0.88 0.88 8.09 165 1.07 4.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/65cab598-3e04-4098-9372-ddb69069d747/@@download/cross_correlation_plot/ENCFF634EFAENCFF724ACV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB097FJM michael-snyder:L-3435 "ENCFF634EFA,ENCFF724ACV" HiSeq 4000 2017-05-05T11:34:40.818425+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45zy780369KkX572K406jGb ENCSR000EFM https://www.encodeproject.org/experiments/ENCSR000EFM transcription factor CEBPB-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF643KYI https://www.encodeproject.org/files/ENCFF643KYI/@@download/ENCFF643KYI.bam ENCFF359YHS https://www.encodeproject.org/files/ENCFF359YHS/@@download/ENCFF359YHS.bam 28.4 M 0 27.9 M 0.982 SE 36 36 native 0.0 M 22.1 M 20.2 M 0.710 0.92 0.94 19.55 115 2.14 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4eb70db-7c98-46d6-801f-f5ba6d51b7ba/@@download/cross_correlation_plot/ENCFF000YBL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJF ENCFF000YBL Illumina Genome Analyzer 2016-12-10T22:45:40.836132+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Gq0036969X0jJ6p3ffbX ENCSR000EFM https://www.encodeproject.org/experiments/ENCSR000EFM transcription factor CEBPB-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF255AHN https://www.encodeproject.org/files/ENCFF255AHN/@@download/ENCFF255AHN.bam ENCFF056XVT https://www.encodeproject.org/files/ENCFF056XVT/@@download/ENCFF056XVT.bam 17.1 M 0 16.6 M 0.966 SE 36 36 native 0.0 M 13.0 M 12.3 M 0.715 0.95 0.95 25.35 120 2.30 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/2adea7c1-f750-42c7-8ef9-2716834b1c87/@@download/cross_correlation_plot/ENCFF000YBO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJE ENCFF000YBO Illumina Genome Analyzer 2016-12-10T21:52:09.606810+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Gzj036969X0jJ6p3ffbq ENCSR000EFC https://www.encodeproject.org/experiments/ENCSR000EFC "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF537IEQ https://www.encodeproject.org/files/ENCFF537IEQ/@@download/ENCFF537IEQ.bam ENCFF424IYB https://www.encodeproject.org/files/ENCFF424IYB/@@download/ENCFF424IYB.bam 29.0 M 0 28.3 M 0.975 SE 36 36 native 0.0 M 21.9 M 20.0 M 0.689 0.92 0.91 11.33 110 1.05 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/339f658b-23fd-4007-9d0e-7f6d6b1ef06f/@@download/cross_correlation_plot/ENCFF000YBU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFW ENCFF000YBU Illumina Genome Analyzer 2016-12-11T04:25:37.674848+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165PKQ03697k5jKB6pJ7qzg ENCSR000EFC https://www.encodeproject.org/experiments/ENCSR000EFC "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF069JVY https://www.encodeproject.org/files/ENCFF069JVY/@@download/ENCFF069JVY.bam ENCFF140BYS https://www.encodeproject.org/files/ENCFF140BYS/@@download/ENCFF140BYS.bam 22.3 M 0 21.5 M 0.965 SE 36 36 native 0.0 M 16.3 M 15.2 M 0.683 0.94 0.94 15.45 100 1.06 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7edf7df-93c4-4265-97d1-90a45089e166/@@download/cross_correlation_plot/ENCFF000YBW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARN ENCFF000YBW Illumina Genome Analyzer 2016-12-11T04:21:17.409640+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165PZ003697yz601ypVJ3bp ENCSR000EFI https://www.encodeproject.org/experiments/ENCSR000EFI "transcription factor,RNA binding protein" CTCF-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF010FWV https://www.encodeproject.org/files/ENCFF010FWV/@@download/ENCFF010FWV.bam ENCFF356VNC https://www.encodeproject.org/files/ENCFF356VNC/@@download/ENCFF356VNC.bam 25.7 M 0 23.6 M 0.921 SE 36 36 native 0.0 M 18.9 M 16.6 M 0.646 0.88 0.89 9.39 130 2.10 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/060591ee-082d-445b-b088-256137bf3866/@@download/cross_correlation_plot/ENCFF000YCK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFD ENCFF000YCK Illumina Genome Analyzer 2016-12-11T04:41:23.590261+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xpQ0369KbxV61z4GFvk5 ENCSR000EFI https://www.encodeproject.org/experiments/ENCSR000EFI "transcription factor,RNA binding protein" CTCF-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF431WUY https://www.encodeproject.org/files/ENCFF431WUY/@@download/ENCFF431WUY.bam ENCFF505JVH https://www.encodeproject.org/files/ENCFF505JVH/@@download/ENCFF505JVH.bam 24.1 M 0 23.0 M 0.955 SE 36 36 native 0.0 M 18.5 M 15.4 M 0.638 0.84 0.87 9.54 120 3.61 2.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c81a32d0-a890-4e73-864d-7ceccb6c49d6/@@download/cross_correlation_plot/ENCFF000YCM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFC ENCFF000YCM Illumina Genome Analyzer 2016-12-11T04:41:18.634199+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xzQ0369GF0YB1zjPf738 ENCSR664OKA https://www.encodeproject.org/experiments/ENCSR664OKA transcription factor ELK1-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF870JSA https://www.encodeproject.org/files/ENCFF870JSA/@@download/ENCFF870JSA.bam ENCFF391YGA https://www.encodeproject.org/files/ENCFF391YGA/@@download/ENCFF391YGA.bam 26.2 M 0 24.0 M 0.915 SE 36 36 native 0.0 M 18.7 M 10.8 M 0.414 0.58 0.53 1.81 130 1.14 7.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/1781329b-cb21-4fa4-89b5-8a00ffe3ad93/@@download/cross_correlation_plot/ENCFF002EVU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB681IZD michael-snyder:ELK1_1277-1_IMR-90_Rep1 ENCFF002EVU Illumina Genome Analyzer IIx 2016-08-30T17:52:26.179096+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2PQ0369Kbz03YVBXFzyp ENCSR664OKA https://www.encodeproject.org/experiments/ENCSR664OKA transcription factor ELK1-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF898FWJ https://www.encodeproject.org/files/ENCFF898FWJ/@@download/ENCFF898FWJ.bam ENCFF085JGZ https://www.encodeproject.org/files/ENCFF085JGZ/@@download/ENCFF085JGZ.bam 31.2 M 0 29.2 M 0.936 SE 36 36 native 0.0 M 21.7 M 19.4 M 0.623 0.90 0.90 9.35 100 1.04 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/58bc3ef6-7d55-45c3-a23f-bcbe0b376c8b/@@download/cross_correlation_plot/ENCFF002EVT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB146KMA michael-snyder:ELK1_1277-1_IMR-90_Rep2 ENCFF002EVT Illumina Genome Analyzer IIx 2016-08-30T17:52:22.602802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2X00369BQ7VQPxBqP1Pf ENCSR124AIG https://www.encodeproject.org/experiments/ENCSR124AIG transcription factor FOS-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF026TRP https://www.encodeproject.org/files/ENCFF026TRP/@@download/ENCFF026TRP.bam ENCFF635KHI https://www.encodeproject.org/files/ENCFF635KHI/@@download/ENCFF635KHI.bam 22.3 M 0 21.0 M 0.938 SE 36 36 native 0.0 M 16.2 M 15.6 M 0.699 0.96 0.96 25.49 130 1.15 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd7f1318-ab77-4961-976a-55c10c078d6d/@@download/cross_correlation_plot/ENCFF002EVM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB063BCL michael-snyder:c-Fos_sc-7202_IMR-90_Rep1 ENCFF002EVM Illumina Genome Analyzer IIx 2016-08-30T17:48:16.256185+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3Vj0369B78V6F5GJ9p2k ENCSR124AIG https://www.encodeproject.org/experiments/ENCSR124AIG transcription factor FOS-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF039IQB https://www.encodeproject.org/files/ENCFF039IQB/@@download/ENCFF039IQB.bam ENCFF258LUK https://www.encodeproject.org/files/ENCFF258LUK/@@download/ENCFF258LUK.bam 24.1 M 0 23.0 M 0.956 SE 36 36 native 0.0 M 18.1 M 16.9 M 0.703 0.94 0.94 15.90 135 1.29 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d962149d-7d31-435d-aad3-654cc0359b37/@@download/cross_correlation_plot/ENCFF002EVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB185HFY michael-snyder:c-Fos_sc-7202_IMR-90_Rep2 ENCFF002EVP Illumina Genome Analyzer IIx 2016-08-30T17:48:26.278563+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3Z8036954zK8K9G2jZfg ENCSR116MBL https://www.encodeproject.org/experiments/ENCSR116MBL transcription factor JUND-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF868JSH https://www.encodeproject.org/files/ENCFF868JSH/@@download/ENCFF868JSH.bam ENCFF087RVY https://www.encodeproject.org/files/ENCFF087RVY/@@download/ENCFF087RVY.bam 33.5 M 0 32.7 M 0.977 SE 36 36 native 0.0 M 26.5 M 23.4 M 0.700 0.89 0.89 9.28 115 1.58 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/65122630-f9f9-41b9-b83c-41a5ece71d76/@@download/cross_correlation_plot/ENCFF002EWH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB648SSK michael-snyder:JunD_sc-74_IMR-90_Rep1 ENCFF002EWH Illumina Genome Analyzer IIx 2016-08-30T17:48:43.115434+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3xj03695qVFpfJBXYkK7 ENCSR116MBL https://www.encodeproject.org/experiments/ENCSR116MBL transcription factor JUND-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF161ILJ https://www.encodeproject.org/files/ENCFF161ILJ/@@download/ENCFF161ILJ.bam ENCFF669IKJ https://www.encodeproject.org/files/ENCFF669IKJ/@@download/ENCFF669IKJ.bam 30.8 M 0 30.5 M 0.989 SE 36 36 native 0.0 M 24.6 M 22.8 M 0.741 0.93 0.93 16.20 145 1.55 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/8293e155-6d09-4758-8476-a44448227de9/@@download/cross_correlation_plot/ENCFF002EVZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB046OWL michael-snyder:JunD_sc-74_IMR-90_Rep2 ENCFF002EVZ Illumina Genome Analyzer IIx 2016-08-30T17:48:43.114916+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ4080369P2yGzP5BYGyvY ENCSR000EFH https://www.encodeproject.org/experiments/ENCSR000EFH transcription factor MAFK-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF748XLG https://www.encodeproject.org/files/ENCFF748XLG/@@download/ENCFF748XLG.bam ENCFF299POX https://www.encodeproject.org/files/ENCFF299POX/@@download/ENCFF299POX.bam 28.2 M 0 27.4 M 0.973 SE 36 36 native 0.0 M 21.9 M 20.2 M 0.717 0.92 0.94 19.09 125 1.56 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bc1061a-bed9-48fa-a1f3-4165e6f7e663/@@download/cross_correlation_plot/ENCFF000YCY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABV ENCFF000YCY Illumina Genome Analyzer 2016-10-09T16:54:37.033698+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J880jv1g5yGjfvVx0P7v ENCSR000EFH https://www.encodeproject.org/experiments/ENCSR000EFH transcription factor MAFK-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF044ZFD https://www.encodeproject.org/files/ENCFF044ZFD/@@download/ENCFF044ZFD.bam ENCFF180NNK https://www.encodeproject.org/files/ENCFF180NNK/@@download/ENCFF180NNK.bam 26.8 M 0 25.5 M 0.949 SE 36 36 native 0.0 M 20.2 M 18.6 M 0.695 0.92 0.93 16.16 135 1.48 2.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/067a249e-f913-4510-b4f4-0507a53d679f/@@download/cross_correlation_plot/ENCFF000YDA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABU ENCFF000YDA Illumina Genome Analyzer 2016-10-09T16:54:00.555809+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J9j0jv1QxJBfj5Zb2pzp ENCSR000EFF https://www.encodeproject.org/experiments/ENCSR000EFF "RNA binding protein,transcription factor" MAZ-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF812FMM https://www.encodeproject.org/files/ENCFF812FMM/@@download/ENCFF812FMM.bam ENCFF867KQD https://www.encodeproject.org/files/ENCFF867KQD/@@download/ENCFF867KQD.bam 31.7 M 0 29.3 M 0.925 SE 36 36 native 0.0 M 23.2 M 15.1 M 0.476 0.65 0.62 2.33 120 1.13 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/78cba6ac-c824-40a6-be4b-0fedb7ed9730/@@download/cross_correlation_plot/ENCFF000YDG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABH ENCFF000YDG Illumina Genome Analyzer 2016-12-11T04:29:58.466740+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165V6j0369BJyPz9fb9qYFb ENCSR000EFF https://www.encodeproject.org/experiments/ENCSR000EFF "RNA binding protein,transcription factor" MAZ-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF035PHI https://www.encodeproject.org/files/ENCFF035PHI/@@download/ENCFF035PHI.bam ENCFF565LCU https://www.encodeproject.org/files/ENCFF565LCU/@@download/ENCFF565LCU.bam 28.7 M 0 26.7 M 0.927 SE 36 36 native 0.0 M 20.6 M 19.0 M 0.662 0.92 0.93 13.64 90 1.40 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1ac641e-9cff-4d71-9a0f-18677710c0d6/@@download/cross_correlation_plot/ENCFF000YDI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHH ENCFF000YDI Illumina Genome Analyzer 2016-12-11T04:27:57.030581+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165VFQ036969X0jJ6p3ffxQ ENCSR000EFE https://www.encodeproject.org/experiments/ENCSR000EFE transcription factor MXI1-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF793JKZ https://www.encodeproject.org/files/ENCFF793JKZ/@@download/ENCFF793JKZ.bam ENCFF194VKK https://www.encodeproject.org/files/ENCFF194VKK/@@download/ENCFF194VKK.bam 26.8 M 0 23.1 M 0.863 SE 36 36 native 0.0 M 18.4 M 10.9 M 0.409 0.60 0.56 1.96 120 1.22 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/05a6bb21-e79a-4e3d-aabb-14926769af7e/@@download/cross_correlation_plot/ENCFF000YDP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOI ENCFF000YDP Illumina Genome Analyzer 2016-12-10T21:50:36.446328+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163B7Q0369K8k6p8qBf9q1J ENCSR000EFE https://www.encodeproject.org/experiments/ENCSR000EFE transcription factor MXI1-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF552LJD https://www.encodeproject.org/files/ENCFF552LJD/@@download/ENCFF552LJD.bam ENCFF298XTJ https://www.encodeproject.org/files/ENCFF298XTJ/@@download/ENCFF298XTJ.bam 31.1 M 0 28.5 M 0.917 SE 36 36 native 0.0 M 21.8 M 19.3 M 0.619 0.88 0.88 8.17 110 1.19 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/a37ea058-d60a-40e8-8abe-6480289cdea2/@@download/cross_correlation_plot/ENCFF000YDR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOJ ENCFF000YDR Illumina Genome Analyzer 2016-12-10T22:47:12.628019+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163BG803699Z3Y8493qbppY ENCSR197WGI https://www.encodeproject.org/experiments/ENCSR197WGI transcription factor NFE2L2-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF461GBT https://www.encodeproject.org/files/ENCFF461GBT/@@download/ENCFF461GBT.bam ENCFF071JVO https://www.encodeproject.org/files/ENCFF071JVO/@@download/ENCFF071JVO.bam 30.1 M 0 28.2 M 0.937 SE 36 36 native 0.0 M 21.2 M 19.1 M 0.634 0.90 0.91 10.99 110 1.29 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1ee33c6-53bf-4c02-8dc0-3cfc7a5fa026/@@download/cross_correlation_plot/ENCFF002EWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB802DMN michael-snyder:Nrf2_sc-13032_IMR-90_Rep2 ENCFF002EWC Illumina Genome Analyzer IIx 2016-08-30T17:52:23.691964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2b803695Q6VfV1Bpzxbg ENCSR197WGI https://www.encodeproject.org/experiments/ENCSR197WGI transcription factor NFE2L2-human IMR-90 primary cell 3 michael-snyder ENCODE3 GRCh38 ENCFF467POD https://www.encodeproject.org/files/ENCFF467POD/@@download/ENCFF467POD.bam ENCFF851GPH https://www.encodeproject.org/files/ENCFF851GPH/@@download/ENCFF851GPH.bam 23.9 M 0 20.6 M 0.861 SE 36 36 native 0.0 M 15.8 M 12.7 M 0.531 0.81 0.81 4.95 130 1.27 2.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/95485a06-4f90-441d-86fc-7309ab0baa38/@@download/cross_correlation_plot/ENCFF002EWD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB427MQL michael-snyder:Nrf2_sc-13032_IMR-90_Rep3 ENCFF002EWD Illumina Genome Analyzer IIx 2016-08-30T17:51:47.762138+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2gj0369F710GX9Bgbg1k ENCSR000EFJ https://www.encodeproject.org/experiments/ENCSR000EFJ transcription factor RAD21-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF753ECA https://www.encodeproject.org/files/ENCFF753ECA/@@download/ENCFF753ECA.bam ENCFF638RTQ https://www.encodeproject.org/files/ENCFF638RTQ/@@download/ENCFF638RTQ.bam 27.6 M 0 26.5 M 0.961 SE 36 36 native 0.0 M 21.6 M 19.6 M 0.709 0.91 0.93 16.15 110 2.12 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/b88b181e-d0cd-472a-8cbf-a4f7b45ba68b/@@download/cross_correlation_plot/ENCFF000YEE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIU ENCFF000YEE Illumina Genome Analyzer 2016-12-10T23:45:57.194981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Kx803699Z3Y8493qbpqZ ENCSR000EFJ https://www.encodeproject.org/experiments/ENCSR000EFJ transcription factor RAD21-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF238XQT https://www.encodeproject.org/files/ENCFF238XQT/@@download/ENCFF238XQT.bam ENCFF271HSG https://www.encodeproject.org/files/ENCFF271HSG/@@download/ENCFF271HSG.bam 32.0 M 0 29.9 M 0.932 SE 36 36 native 0.0 M 23.6 M 21.6 M 0.673 0.91 0.92 13.20 120 1.60 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/210c82e6-7357-42ef-8920-eee3abf42372/@@download/cross_correlation_plot/ENCFF000YEG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIV ENCFF000YEG Illumina Genome Analyzer 2016-12-11T00:13:02.606948+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163P280369Bxb30J6x5bZ6b ENCSR000EFG https://www.encodeproject.org/experiments/ENCSR000EFG transcription factor RCOR1-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF939NEW https://www.encodeproject.org/files/ENCFF939NEW/@@download/ENCFF939NEW.bam ENCFF178QNC https://www.encodeproject.org/files/ENCFF178QNC/@@download/ENCFF178QNC.bam 31.0 M 0 29.7 M 0.959 SE 36 36 native 0.0 M 23.2 M 19.1 M 0.615 0.82 0.81 5.10 125 1.12 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb09b49b-6d98-45a4-ad48-6f40ce746cec/@@download/cross_correlation_plot/ENCFF000YCB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUL ENCFF000YCB Illumina Genome Analyzer 2016-12-11T02:48:20.659714+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164038036933PVVJ7Qq01V2 ENCSR000EFG https://www.encodeproject.org/experiments/ENCSR000EFG transcription factor RCOR1-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF397HYT https://www.encodeproject.org/files/ENCFF397HYT/@@download/ENCFF397HYT.bam ENCFF204IAC https://www.encodeproject.org/files/ENCFF204IAC/@@download/ENCFF204IAC.bam 31.3 M 0 29.4 M 0.938 SE 36 36 native 0.0 M 22.0 M 19.7 M 0.630 0.90 0.89 9.24 110 1.05 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/71cca08f-60dc-45d9-9637-27864ae7fd19/@@download/cross_correlation_plot/ENCFF000YCD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMN ENCFF000YCD Illumina Genome Analyzer 2016-12-11T02:53:43.213928+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1640800369445BJJ915X9jb ENCSR000EFD https://www.encodeproject.org/experiments/ENCSR000EFD transcription factor RFX5-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF820NUO https://www.encodeproject.org/files/ENCFF820NUO/@@download/ENCFF820NUO.bam ENCFF541IOW https://www.encodeproject.org/files/ENCFF541IOW/@@download/ENCFF541IOW.bam 29.9 M 0 26.7 M 0.895 SE 36 36 native 0.0 M 21.1 M 15.1 M 0.505 0.71 0.70 3.05 130 1.18 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ef0fd54-1cfd-430a-92b3-035c8de60c49/@@download/cross_correlation_plot/ENCFF000YEM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOE ENCFF000YEM Illumina Genome Analyzer 2016-12-10T22:23:54.511271+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163BX00369Bxb30J6x5bZ5Q ENCSR000EFD https://www.encodeproject.org/experiments/ENCSR000EFD transcription factor RFX5-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF821WPZ https://www.encodeproject.org/files/ENCFF821WPZ/@@download/ENCFF821WPZ.bam ENCFF987JAU https://www.encodeproject.org/files/ENCFF987JAU/@@download/ENCFF987JAU.bam 31.3 M 0 29.2 M 0.936 SE 36 36 native 0.0 M 22.0 M 20.0 M 0.639 0.91 0.91 11.33 105 1.08 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/852616bd-9785-4bf3-b51f-96bb7e12ee71/@@download/cross_correlation_plot/ENCFF000YEO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AET ENCFF000YEO Illumina Genome Analyzer 2016-12-10T22:23:45.453971+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Bfj03692f1gp513PxgGp ENCSR000HPG https://www.encodeproject.org/experiments/ENCSR000HPG transcription factor SMC3-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF195AOS https://www.encodeproject.org/files/ENCFF195AOS/@@download/ENCFF195AOS.bam ENCFF013WBK https://www.encodeproject.org/files/ENCFF013WBK/@@download/ENCFF013WBK.bam 28.1 M 0 27.1 M 0.966 SE 36 36 native 0.0 M 22.2 M 16.8 M 0.598 0.76 0.75 3.75 125 1.73 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/da1e6507-202d-440e-be50-1e99695589ef/@@download/cross_correlation_plot/ENCFF002EVY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB631ERN michael-snyder:SMC3_ab9263_IMR-90_Rep1 ENCFF002EVY Illumina Genome Analyzer IIx 2016-08-30T17:51:38.903497+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ33Q0369F710GX9Bgbg2F ENCSR000HPG https://www.encodeproject.org/experiments/ENCSR000HPG transcription factor SMC3-human IMR-90 primary cell 3 michael-snyder ENCODE3 GRCh38 ENCFF657UEE https://www.encodeproject.org/files/ENCFF657UEE/@@download/ENCFF657UEE.bam ENCFF616BAZ https://www.encodeproject.org/files/ENCFF616BAZ/@@download/ENCFF616BAZ.bam 23.4 M 0 20.7 M 0.882 SE 36 36 native 0.0 M 16.2 M 13.1 M 0.559 0.81 0.81 4.94 120 1.41 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/149ad28f-2d05-4089-9c69-08ad49207122/@@download/cross_correlation_plot/ENCFF002EWB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB850EBA michael-snyder:SMC3_ab9263_IMR-90_Rep3 ENCFF002EWB Illumina Genome Analyzer IIx 2016-08-30T17:48:14.749953+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3680369B5j9GPVGJ0Xy9 ENCSR241LIH https://www.encodeproject.org/experiments/ENCSR241LIH transcription factor AFF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF373JGV https://www.encodeproject.org/files/ENCFF373JGV/@@download/ENCFF373JGV.bam ENCFF559LTX https://www.encodeproject.org/files/ENCFF559LTX/@@download/ENCFF559LTX.bam 60.7 M 0 59.4 M 0.978 PE 100 100 native 25.9 M 0.0 M 22.6 M 0.746 0.88 0.88 7.90 215 1.27 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/559ff906-9da2-43d2-8834-8eaf1d4ace2b/@@download/cross_correlation_plot/ENCFF404ITDENCFF792VBK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB086HWN michael-snyder:L-1680 "ENCFF404ITD,ENCFF792VBK" HiSeq 2000 2017-05-05T21:43:35.967077+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469xKQ03692Z7YP70b624g1 ENCSR241LIH https://www.encodeproject.org/experiments/ENCSR241LIH transcription factor AFF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF524KCA https://www.encodeproject.org/files/ENCFF524KCA/@@download/ENCFF524KCA.bam ENCFF635BPD https://www.encodeproject.org/files/ENCFF635BPD/@@download/ENCFF635BPD.bam 46.1 M 0 45.2 M 0.980 PE 100 100 native 19.8 M 0.0 M 17.3 M 0.749 0.87 0.87 7.73 235 1.37 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/84769414-aba2-40e9-a6a7-669254e3b9ae/@@download/cross_correlation_plot/ENCFF452EKBENCFF267LVE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB092EUT michael-snyder:L-1681 "ENCFF267LVE,ENCFF452EKB" HiSeq 2000 2017-05-05T21:14:49.571427+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469xXQ03699Yp667114bzXB ENCSR571BUF https://www.encodeproject.org/experiments/ENCSR571BUF transcription factor ARHGAP35-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF887LKI https://www.encodeproject.org/files/ENCFF887LKI/@@download/ENCFF887LKI.bam ENCFF200RFV https://www.encodeproject.org/files/ENCFF200RFV/@@download/ENCFF200RFV.bam 89.6 M 0 83.1 M 0.928 PE 100 100 native 36.3 M 0.0 M 34.4 M 0.768 0.95 0.95 19.60 180 1.06 2.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e6d83d5-893c-4a06-83b8-acc216c67988/@@download/cross_correlation_plot/ENCFF439UUPENCFF333JPS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB693PHV michael-snyder:L-2925 "ENCFF333JPS,ENCFF439UUP" HiSeq 2000 2017-01-28T05:08:44.296094+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k3Z8036958ZB25bBz83y5 ENCSR571BUF https://www.encodeproject.org/experiments/ENCSR571BUF transcription factor ARHGAP35-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF627XYQ https://www.encodeproject.org/files/ENCFF627XYQ/@@download/ENCFF627XYQ.bam ENCFF212FEG https://www.encodeproject.org/files/ENCFF212FEG/@@download/ENCFF212FEG.bam 77.7 M 0 71.4 M 0.919 PE 100 100 native 31.4 M 0.0 M 29.6 M 0.761 0.94 0.94 17.25 180 1.07 3.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb7d71e5-b4b1-4fd0-84e2-e4398651cda0/@@download/cross_correlation_plot/ENCFF111ZWVENCFF129HKI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB240ZWG michael-snyder:L-2926 "ENCFF111ZWV,ENCFF129HKI" HiSeq 2000 2017-01-28T05:06:42.593675+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k3p0036958ZB25bBz83yK ENCSR667RIJ https://www.encodeproject.org/experiments/ENCSR667RIJ transcription factor ARID3A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF957EDP https://www.encodeproject.org/files/ENCFF957EDP/@@download/ENCFF957EDP.bam ENCFF916SLQ https://www.encodeproject.org/files/ENCFF916SLQ/@@download/ENCFF916SLQ.bam 74.4 M 0 72.3 M 0.972 PE 100 100 native 30.6 M 0.0 M 28.6 M 0.770 0.93 0.93 14.97 210 1.08 2.64 Missing ENCLB061AZC michael-snyder:L-3032 "ENCFF293PVN,ENCFF364JRQ" HiSeq 2000 2016-10-27T22:28:28.320666+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bqFj03697KPkyX9BPQF5B ENCSR667RIJ https://www.encodeproject.org/experiments/ENCSR667RIJ transcription factor ARID3A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF150FYM https://www.encodeproject.org/files/ENCFF150FYM/@@download/ENCFF150FYM.bam ENCFF055RML https://www.encodeproject.org/files/ENCFF055RML/@@download/ENCFF055RML.bam 60.6 M 0 58.1 M 0.959 PE 100 100 native 24.5 M 0.0 M 20.9 M 0.689 0.85 0.85 6.46 190 1.08 4.67 Missing ENCLB832UEV michael-snyder:L-3033 "ENCFF119HBO,ENCFF980DZQ" HiSeq 2000 2016-10-27T22:28:34.977955+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bqP803694q32PPxBJ6b16 ENCSR155KHM https://www.encodeproject.org/experiments/ENCSR155KHM transcription factor ARNT-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF108SDD https://www.encodeproject.org/files/ENCFF108SDD/@@download/ENCFF108SDD.bam ENCFF686XTG https://www.encodeproject.org/files/ENCFF686XTG/@@download/ENCFF686XTG.bam 71.8 M 0 70.7 M 0.984 PE 100 100 native 31.2 M 0.0 M 27.6 M 0.769 0.89 0.89 8.55 220 1.06 3.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/21e3cc65-044f-466c-b99a-8c51ffde279c/@@download/cross_correlation_plot/ENCFF109UIVENCFF748SHJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB465TLL michael-snyder:L-2061 "ENCFF748SHJ,ENCFF109UIV" HiSeq 2000 2016-10-09T17:04:44.955414+00:00 released processing https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44980jv1xPyfX78Yz4j0X ENCSR155KHM https://www.encodeproject.org/experiments/ENCSR155KHM transcription factor ARNT-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF928JGK https://www.encodeproject.org/files/ENCFF928JGK/@@download/ENCFF928JGK.bam ENCFF636HGA https://www.encodeproject.org/files/ENCFF636HGA/@@download/ENCFF636HGA.bam 62.0 M 0 61.0 M 0.985 PE 100 100 native 27.1 M 0.0 M 22.5 M 0.727 0.83 0.83 5.69 225 1.07 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/7979f189-255a-4823-80a8-f051452f258a/@@download/cross_correlation_plot/ENCFF126ENCENCFF198XWC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB945YAD michael-snyder:L-2062 "ENCFF198XWC,ENCFF126ENC" HiSeq 2000 2016-10-09T17:03:54.941858+00:00 released processing https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44Bj0jv1XYYX2Fxk3f51z ENCSR669NFS https://www.encodeproject.org/experiments/ENCSR669NFS transcription factor ARNT-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF509BKM https://www.encodeproject.org/files/ENCFF509BKM/@@download/ENCFF509BKM.bam ENCFF733QFW https://www.encodeproject.org/files/ENCFF733QFW/@@download/ENCFF733QFW.bam 48.6 M 0 47.6 M 0.981 PE 100 100 native 21.2 M 0.0 M 17.9 M 0.736 0.85 0.84 6.22 220 1.09 4.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d9b770c-a484-4a07-8c56-781d9e002a4f/@@download/cross_correlation_plot/ENCFF041PSDENCFF023BWP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB962LRB michael-snyder:L-307 "ENCFF023BWP,ENCFF041PSD" HiSeq 2000 2017-03-04T18:11:01.256312+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv2080369Kyj9Q3k1bxZbY ENCSR669NFS https://www.encodeproject.org/experiments/ENCSR669NFS transcription factor ARNT-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF454DSR https://www.encodeproject.org/files/ENCFF454DSR/@@download/ENCFF454DSR.bam ENCFF433HWM https://www.encodeproject.org/files/ENCFF433HWM/@@download/ENCFF433HWM.bam 48.4 M 0 47.4 M 0.981 PE 100 100 native 21.0 M 0.0 M 19.1 M 0.790 0.91 0.91 10.84 200 1.09 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c70b9dd-975c-4d47-83aa-b75442a072c0/@@download/cross_correlation_plot/ENCFF806CECENCFF004DQS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB082UZD michael-snyder:L-308 "ENCFF004DQS,ENCFF806CEC" HiSeq 2000 2017-03-04T18:10:33.704439+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv2B80369994fv3jBY5yb9 ENCSR115BBC https://www.encodeproject.org/experiments/ENCSR115BBC transcription factor ASH1L-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF310XPD https://www.encodeproject.org/files/ENCFF310XPD/@@download/ENCFF310XPD.bam ENCFF464ELQ https://www.encodeproject.org/files/ENCFF464ELQ/@@download/ENCFF464ELQ.bam 56.9 M 0 55.8 M 0.979 PE 100 100 native 24.6 M 0.0 M 19.8 M 0.695 0.81 0.80 5.02 210 1.14 3.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/67d35405-14b8-4b6a-b3c9-b5839d8f736d/@@download/cross_correlation_plot/ENCFF737EQIENCFF158TRB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB606IZY michael-snyder:L-1826 "ENCFF158TRB,ENCFF737EQI" HiSeq 2000 2016-10-09T17:02:55.482785+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4F280jv1XYYX2Fxk3f5B9 ENCSR115BBC https://www.encodeproject.org/experiments/ENCSR115BBC transcription factor ASH1L-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF473BZX https://www.encodeproject.org/files/ENCFF473BZX/@@download/ENCFF473BZX.bam ENCFF508PWE https://www.encodeproject.org/files/ENCFF508PWE/@@download/ENCFF508PWE.bam 141.5 M 0 138.4 M 0.978 PE 100 100 native 61.2 M 0.0 M 55.9 M 0.790 0.92 0.92 12.20 210 1.05 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/321744fb-1887-4816-a676-ac2c4f84c48f/@@download/cross_correlation_plot/ENCFF235JMIENCFF993LLQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB334TKZ michael-snyder:L-1827 "ENCFF235JMI,ENCFF993LLQ" HiSeq 2000 2016-10-09T17:14:37.356150+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4F3j0jv1vY92b0GYjVG14 ENCSR137JSB https://www.encodeproject.org/experiments/ENCSR137JSB transcription factor ATF2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF704AJD https://www.encodeproject.org/files/ENCFF704AJD/@@download/ENCFF704AJD.bam ENCFF855CZO https://www.encodeproject.org/files/ENCFF855CZO/@@download/ENCFF855CZO.bam 56.0 M 0 53.6 M 0.956 PE 100 100 native 22.5 M 0.0 M 19.6 M 0.701 0.88 0.88 8.42 190 1.54 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdf1e1c5-ce6f-496f-9d8c-bc78967912ca/@@download/cross_correlation_plot/ENCFF886LINENCFF125SSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB514SVQ michael-snyder:L-160 "ENCFF886LIN,ENCFF125SSX" HiSeq 2000 2017-02-22T05:23:13.610295+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5f9Q03695xXvG3Q1QQXYx ENCSR137JSB https://www.encodeproject.org/experiments/ENCSR137JSB transcription factor ATF2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF589ABS https://www.encodeproject.org/files/ENCFF589ABS/@@download/ENCFF589ABS.bam ENCFF564CDF https://www.encodeproject.org/files/ENCFF564CDF/@@download/ENCFF564CDF.bam 68.1 M 0 66.9 M 0.982 PE 100 100 native 29.0 M 0.0 M 28.6 M 0.841 0.99 0.99 96.85 195 1.06 3.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/7518acd8-ba3d-4254-bf52-c11fd55a6c6c/@@download/cross_correlation_plot/ENCFF447RFNENCFF098GYG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB778TAM michael-snyder:L-177 "ENCFF447RFN,ENCFF098GYG" HiSeq 2000 2017-02-22T05:25:00.348265+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5fKj0369KVv5gF38JBQyb ENCSR028UIU https://www.encodeproject.org/experiments/ENCSR028UIU transcription factor ATF3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF373DUA https://www.encodeproject.org/files/ENCFF373DUA/@@download/ENCFF373DUA.bam ENCFF214HPX https://www.encodeproject.org/files/ENCFF214HPX/@@download/ENCFF214HPX.bam 99.6 M 0 94.7 M 0.950 PE 100 100 native 40.9 M 0.0 M 33.1 M 0.665 0.81 0.81 5.18 235 1.35 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/eebc3abd-c22d-4bb2-a9a8-751d8cb1bfd6/@@download/cross_correlation_plot/ENCFF457RYNENCFF126JWD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB856XCJ michael-snyder:L-2071 "ENCFF126JWD,ENCFF457RYN" HiSeq 4000 2017-01-26T01:24:01.848481+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K8yQ0369424qKP3Yf7xZG ENCSR028UIU https://www.encodeproject.org/experiments/ENCSR028UIU transcription factor ATF3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF382QTB https://www.encodeproject.org/files/ENCFF382QTB/@@download/ENCFF382QTB.bam ENCFF420AYY https://www.encodeproject.org/files/ENCFF420AYY/@@download/ENCFF420AYY.bam 117.4 M 0 113.8 M 0.970 PE 100 100 native 49.6 M 0.0 M 34.2 M 0.583 0.70 0.69 3.13 235 1.71 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/126272c3-a649-4d10-8787-411523666f42/@@download/cross_correlation_plot/ENCFF367HUFENCFF169CRK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB439NIJ michael-snyder:L-2072 "ENCFF367HUF,ENCFF169CRK" HiSeq 4000 2017-01-26T02:38:28.832905+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB600369P4Py796zbxJ3q ENCSR213QSF https://www.encodeproject.org/experiments/ENCSR213QSF transcription factor ATF3-human K562 immortalized cell line michael-snyder ENCODE3 no fastqs requires lab review ENCSR145TSJ https://www.encodeproject.org/experiments/ENCSR145TSJ transcription factor ATF4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF102VJO https://www.encodeproject.org/files/ENCFF102VJO/@@download/ENCFF102VJO.bam ENCFF552SPI https://www.encodeproject.org/files/ENCFF552SPI/@@download/ENCFF552SPI.bam 54.7 M 0 53.6 M 0.979 PE 100 100 native 23.5 M 0.0 M 20.7 M 0.758 0.88 0.88 8.42 215 1.71 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/c10bd96d-6f61-4af4-9eaa-7c5a33e34f5c/@@download/cross_correlation_plot/ENCFF081USSENCFF069VNL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB807FZV michael-snyder:L-1720 "ENCFF069VNL,ENCFF081USS" HiSeq 2000 2016-10-09T17:03:04.521756+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43580jv1XvFGkBjjfjQ9G ENCSR145TSJ https://www.encodeproject.org/experiments/ENCSR145TSJ transcription factor ATF4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF313JTU https://www.encodeproject.org/files/ENCFF313JTU/@@download/ENCFF313JTU.bam ENCFF933IST https://www.encodeproject.org/files/ENCFF933IST/@@download/ENCFF933IST.bam 61.9 M 0 58.9 M 0.951 PE 100 100 native 25.9 M 0.0 M 22.8 M 0.737 0.88 0.88 8.15 225 1.54 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8eeb405-8883-43bf-9b20-01d27924a639/@@download/cross_correlation_plot/ENCFF565KLIENCFF682IGK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB002MVF michael-snyder:L-1721 "ENCFF565KLI,ENCFF682IGK" HiSeq 2000 2016-10-09T17:04:35.218994+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43700jv1zBYbxYJ5zzz83 ENCSR792IYC https://www.encodeproject.org/experiments/ENCSR792IYC "RNA binding protein,transcription factor" BCLAF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF254LLT https://www.encodeproject.org/files/ENCFF254LLT/@@download/ENCFF254LLT.bam ENCFF150YTV https://www.encodeproject.org/files/ENCFF150YTV/@@download/ENCFF150YTV.bam 58.9 M 0 52.0 M 0.882 PE 100 100 native 22.8 M 0.0 M 21.0 M 0.711 0.92 0.92 12.24 185 1.08 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c93b8e1-b196-4a4b-9943-0bc5a78aa1fe/@@download/cross_correlation_plot/ENCFF801FWCENCFF455GIL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB660CGZ michael-snyder:L-2909 "ENCFF455GIL,ENCFF801FWC" HiSeq 2000 2017-01-28T05:03:45.772749+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k4GQ03690QKBV65qQ3vG8 ENCSR792IYC https://www.encodeproject.org/experiments/ENCSR792IYC "RNA binding protein,transcription factor" BCLAF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF615VMZ https://www.encodeproject.org/files/ENCFF615VMZ/@@download/ENCFF615VMZ.bam ENCFF497HJM https://www.encodeproject.org/files/ENCFF497HJM/@@download/ENCFF497HJM.bam 62.8 M 0 56.3 M 0.896 PE 100 100 native 24.5 M 0.0 M 21.7 M 0.692 0.89 0.89 8.60 180 1.08 4.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae3de059-24dc-48ee-8cc2-d9b237575ee8/@@download/cross_correlation_plot/ENCFF404NEPENCFF355NCQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB246JZB michael-snyder:L-2910 "ENCFF404NEP,ENCFF355NCQ" HiSeq 2000 2017-01-28T05:04:09.287238+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k4Xj0369PFk0Y66PvYQGb ENCSR177XCS https://www.encodeproject.org/experiments/ENCSR177XCS transcription factor BRD9-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF410BXB https://www.encodeproject.org/files/ENCFF410BXB/@@download/ENCFF410BXB.bam ENCFF558AOF https://www.encodeproject.org/files/ENCFF558AOF/@@download/ENCFF558AOF.bam 42.3 M 0 41.5 M 0.982 PE 100 100 native 18.4 M 0.0 M 16.8 M 0.794 0.91 0.91 11.14 215 1.12 2.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f126f92-134f-4529-942b-40573cc29926/@@download/cross_correlation_plot/ENCFF700CIVENCFF872XVD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB268BCD michael-snyder:L-1834 "ENCFF700CIV,ENCFF872XVD" HiSeq 2000 2016-10-09T17:10:04.914679+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kQ00jv1vY92b0GYjVFVz ENCSR177XCS https://www.encodeproject.org/experiments/ENCSR177XCS transcription factor BRD9-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF287QPE https://www.encodeproject.org/files/ENCFF287QPE/@@download/ENCFF287QPE.bam ENCFF110WHO https://www.encodeproject.org/files/ENCFF110WHO/@@download/ENCFF110WHO.bam 55.0 M 0 54.2 M 0.984 PE 100 100 native 23.9 M 0.0 M 23.2 M 0.844 0.97 0.97 34.49 205 1.09 2.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d8cba65-f659-4a51-b7b9-a05ccd5e783e/@@download/cross_correlation_plot/ENCFF373VRZENCFF539YNG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB052OCB michael-snyder:L-1835 "ENCFF539YNG,ENCFF373VRZ" HiSeq 2000 2016-10-09T17:11:17.473681+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kV80jv1g5yGjfvVx0KbB ENCSR699PVC https://www.encodeproject.org/experiments/ENCSR699PVC transcription factor CBFA2T2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF207EXR https://www.encodeproject.org/files/ENCFF207EXR/@@download/ENCFF207EXR.bam ENCFF045XLH https://www.encodeproject.org/files/ENCFF045XLH/@@download/ENCFF045XLH.bam 72.1 M 0 70.5 M 0.978 PE 100 100 native 31.1 M 0.0 M 28.2 M 0.781 0.91 0.91 10.41 195 1.65 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/3573e236-edd9-4bc5-a853-f82eeaf4c84a/@@download/cross_correlation_plot/ENCFF501GVPENCFF590GNR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB013HZL michael-snyder:L-2949 "ENCFF501GVP,ENCFF590GNR" HiSeq 2000 2017-02-22T05:24:38.759073+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5bz803699BJ8f3PbkYB6X ENCSR699PVC https://www.encodeproject.org/experiments/ENCSR699PVC transcription factor CBFA2T2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF670UAP https://www.encodeproject.org/files/ENCFF670UAP/@@download/ENCFF670UAP.bam ENCFF816MDI https://www.encodeproject.org/files/ENCFF816MDI/@@download/ENCFF816MDI.bam 55.0 M 0 53.6 M 0.974 PE 100 100 native 23.6 M 0.0 M 20.9 M 0.762 0.89 0.89 8.80 195 1.72 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5bb04db-40a0-4db8-988d-8477475be6c8/@@download/cross_correlation_plot/ENCFF875MPKENCFF477TYW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB402DVN michael-snyder:L-2950 "ENCFF477TYW,ENCFF875MPK" HiSeq 2000 2017-02-22T05:23:27.294931+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5f38036979pgj3P6Zfp56 ENCSR697YLJ https://www.encodeproject.org/experiments/ENCSR697YLJ transcription factor CBFA2T3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF154KUY https://www.encodeproject.org/files/ENCFF154KUY/@@download/ENCFF154KUY.bam ENCFF684LTP https://www.encodeproject.org/files/ENCFF684LTP/@@download/ENCFF684LTP.bam 68.0 M 0 66.4 M 0.977 PE 100 100 native 28.7 M 0.0 M 27.4 M 0.805 0.95 0.95 21.82 200 3.26 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5ac7a94-93e0-4e53-959b-ceeddb70e89e/@@download/cross_correlation_plot/ENCFF238IYZENCFF203LDU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB510SZJ michael-snyder:L-2953 "ENCFF238IYZ,ENCFF203LDU" HiSeq 2000 2017-02-22T05:24:26.358729+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5bbQ036951XgQKGZX858p ENCSR697YLJ https://www.encodeproject.org/experiments/ENCSR697YLJ transcription factor CBFA2T3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF473LBU https://www.encodeproject.org/files/ENCFF473LBU/@@download/ENCFF473LBU.bam ENCFF334NMV https://www.encodeproject.org/files/ENCFF334NMV/@@download/ENCFF334NMV.bam 55.7 M 0 54.0 M 0.971 PE 100 100 native 23.2 M 0.0 M 22.1 M 0.793 0.95 0.95 20.24 210 2.88 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/c32569a8-6041-4f11-b0b7-9e5529f6bd0f/@@download/cross_correlation_plot/ENCFF256ZUFENCFF090VRQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB808HIQ michael-snyder:L-2954 "ENCFF256ZUF,ENCFF090VRQ" HiSeq 2000 2017-02-22T05:23:22.075056+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5bkj036951XgQKGZX8594 ENCSR343IFJ https://www.encodeproject.org/experiments/ENCSR343IFJ transcription factor CC2D1A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF138PZX https://www.encodeproject.org/files/ENCFF138PZX/@@download/ENCFF138PZX.bam ENCFF689TUR https://www.encodeproject.org/files/ENCFF689TUR/@@download/ENCFF689TUR.bam 62.2 M 0 55.6 M 0.894 PE 100 100 native 24.2 M 0.0 M 20.8 M 0.669 0.86 0.86 7.14 215 1.10 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/fda97cd1-bed5-483a-8717-d9d06437f887/@@download/cross_correlation_plot/ENCFF608EHVENCFF197ETF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB913NPL michael-snyder:L-1980 "ENCFF197ETF,ENCFF608EHV" HiSeq 2000 2016-10-09T17:03:38.399843+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XZQ0jv1QxJBfj5Zb2q4v ENCSR343IFJ https://www.encodeproject.org/experiments/ENCSR343IFJ transcription factor CC2D1A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF039QUZ https://www.encodeproject.org/files/ENCFF039QUZ/@@download/ENCFF039QUZ.bam ENCFF306KNJ https://www.encodeproject.org/files/ENCFF306KNJ/@@download/ENCFF306KNJ.bam 72.1 M 0 66.0 M 0.916 PE 100 100 native 28.8 M 0.0 M 24.8 M 0.687 0.86 0.86 6.98 205 1.15 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/2aa5ed3b-b271-45b0-80d7-29804310c0a3/@@download/cross_correlation_plot/ENCFF160TXMENCFF134VGP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB211LQN michael-snyder:L-1981 "ENCFF160TXM,ENCFF134VGP" HiSeq 2000 2016-10-09T17:07:28.667282+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Xf00jv1vY92b0GYjVG89 ENCSR121PFY https://www.encodeproject.org/experiments/ENCSR121PFY transcription factor CDC5L-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF201MXQ https://www.encodeproject.org/files/ENCFF201MXQ/@@download/ENCFF201MXQ.bam ENCFF014PIX https://www.encodeproject.org/files/ENCFF014PIX/@@download/ENCFF014PIX.bam 53.7 M 0 52.8 M 0.983 PE 100 100 native 23.3 M 0.0 M 22.2 M 0.825 0.95 0.95 22.12 200 1.09 3.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2a411d1-0e33-4ef4-99c8-115afbd52a55/@@download/cross_correlation_plot/ENCFF847ZNJENCFF300KRT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB691DTZ michael-snyder:L-2278 "ENCFF847ZNJ,ENCFF300KRT" HiSeq 2000 2016-10-09T17:12:06.897160+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3j600jv1XYYX2Fxk3f4Y8 ENCSR121PFY https://www.encodeproject.org/experiments/ENCSR121PFY transcription factor CDC5L-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF049RJI https://www.encodeproject.org/files/ENCFF049RJI/@@download/ENCFF049RJI.bam ENCFF357YDT https://www.encodeproject.org/files/ENCFF357YDT/@@download/ENCFF357YDT.bam 53.0 M 0 51.6 M 0.973 PE 100 100 native 22.9 M 0.0 M 21.5 M 0.809 0.94 0.94 17.10 195 1.10 3.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc4fda36-6a61-402b-9236-1425216a8513/@@download/cross_correlation_plot/ENCFF899BAMENCFF146CPM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB557YKO michael-snyder:L-2279 "ENCFF146CPM,ENCFF899BAM" HiSeq 2000 2016-10-09T17:12:06.802796+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3j7Q0jv1XYYX2Fxk3f4YV ENCSR332MSJ https://www.encodeproject.org/experiments/ENCSR332MSJ transcription factor CDC5L-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF981UEZ https://www.encodeproject.org/files/ENCFF981UEZ/@@download/ENCFF981UEZ.bam ENCFF784BFI https://www.encodeproject.org/files/ENCFF784BFI/@@download/ENCFF784BFI.bam 79.2 M 0 77.0 M 0.971 PE 100 100 native 33.7 M 0.0 M 30.2 M 0.761 0.90 0.90 9.44 195 1.06 6.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/cca32d43-2e27-4522-924f-a6bfd8715c3c/@@download/cross_correlation_plot/ENCFF026YGCENCFF713SHG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB606KJI michael-snyder:L-2276 "ENCFF713SHG,ENCFF026YGC" HiSeq 4000 2016-10-27T22:25:46.944053+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bgqQ0369BX1xqb1B80vV5 ENCSR332MSJ https://www.encodeproject.org/experiments/ENCSR332MSJ transcription factor CDC5L-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF691DXN https://www.encodeproject.org/files/ENCFF691DXN/@@download/ENCFF691DXN.bam ENCFF805IBI https://www.encodeproject.org/files/ENCFF805IBI/@@download/ENCFF805IBI.bam 111.3 M 0 107.9 M 0.970 PE 100 100 native 47.1 M 0.0 M 36.4 M 0.654 0.77 0.77 4.22 215 1.05 4.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6a51066-d088-4a40-abd5-09443535cc46/@@download/cross_correlation_plot/ENCFF390QCEENCFF555ESW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB398KGD michael-snyder:L-2277 "ENCFF555ESW,ENCFF390QCE" HiSeq 4000 2016-10-27T22:31:34.554070+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bgyQ036923z1QYVBPp823 ENCSR000EHE https://www.encodeproject.org/experiments/ENCSR000EHE transcription factor CEBPB-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF729WGC https://www.encodeproject.org/files/ENCFF729WGC/@@download/ENCFF729WGC.bam ENCFF763YQX https://www.encodeproject.org/files/ENCFF763YQX/@@download/ENCFF763YQX.bam 31.5 M 0 28.0 M 0.890 SE 36 36 native 0.0 M 20.9 M 19.4 M 0.616 0.93 0.95 28.52 115 1.62 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c3f87b5-2d1e-4dc7-acf2-1dbb4a1fecaa/@@download/cross_correlation_plot/ENCFF000YIC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVH ENCFF000YIC Illumina Genome Analyzer 2016-12-10T21:40:17.916874+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16368803693J2XX63yZ7BxQ ENCSR000EHE https://www.encodeproject.org/experiments/ENCSR000EHE transcription factor CEBPB-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF953ZZL https://www.encodeproject.org/files/ENCFF953ZZL/@@download/ENCFF953ZZL.bam ENCFF443POA https://www.encodeproject.org/files/ENCFF443POA/@@download/ENCFF443POA.bam 25.3 M 0 23.4 M 0.926 SE 36 36 native 0.0 M 17.3 M 16.2 M 0.639 0.93 0.95 21.55 130 1.49 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/39a1814f-77f9-463d-9379-22f1241abb7d/@@download/cross_correlation_plot/ENCFF000YID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVG ENCFF000YID Illumina Genome Analyzer 2016-12-10T21:29:43.584411+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1636J00369KQ3Yk1yz1kfZY ENCSR618GDK https://www.encodeproject.org/experiments/ENCSR618GDK "RNA binding protein,transcription factor" CEBPZ-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF576EDK https://www.encodeproject.org/files/ENCFF576EDK/@@download/ENCFF576EDK.bam ENCFF351YEW https://www.encodeproject.org/files/ENCFF351YEW/@@download/ENCFF351YEW.bam 24.1 M 0 22.3 M 0.923 SE 36 36 native 0.0 M 16.9 M 16.3 M 0.676 0.97 0.97 29.53 110 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/25ce52d7-07ae-421d-94e5-b85c621f2479/@@download/cross_correlation_plot/ENCFF002EEE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB194JWF michael-snyder:CEBPZ_SAB2100398_K562_Rep1 ENCFF002EEE Illumina Genome Analyzer IIx 2016-10-09T17:00:32.398581+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv491Q0jv1f60PxyZ9JGP92 ENCSR618GDK https://www.encodeproject.org/experiments/ENCSR618GDK "RNA binding protein,transcription factor" CEBPZ-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF799RPS https://www.encodeproject.org/files/ENCFF799RPS/@@download/ENCFF799RPS.bam ENCFF588IRF https://www.encodeproject.org/files/ENCFF588IRF/@@download/ENCFF588IRF.bam 29.5 M 0 27.4 M 0.929 SE 36 36 native 0.0 M 21.1 M 19.0 M 0.643 0.90 0.90 9.85 120 1.05 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/21cbfb94-fe56-4437-9042-16022c1e449b/@@download/cross_correlation_plot/ENCFF002EEI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB154RYN michael-snyder:CEBPZ_SAB2100398_K562_Rep4 ENCFF002EEI Illumina Genome Analyzer IIx 2016-10-09T17:00:20.099805+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv492j0jv1QxJBfj5Zb2ppQ ENCSR065XVO https://www.encodeproject.org/experiments/ENCSR065XVO transcription factor CHAMP1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF824HGA https://www.encodeproject.org/files/ENCFF824HGA/@@download/ENCFF824HGA.bam ENCFF653KCU https://www.encodeproject.org/files/ENCFF653KCU/@@download/ENCFF653KCU.bam 131.3 M 0 123.3 M 0.939 PE 100 100 native 53.0 M 0.0 M 43.1 M 0.657 0.86 0.86 7.01 190 1.06 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a6b7599-0e14-4947-a1f0-00e0a9b2610c/@@download/cross_correlation_plot/ENCFF088KVKENCFF576YEJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB935DOS michael-snyder:L-1760 "ENCFF088KVK,ENCFF576YEJ" HiSeq 4000 2016-09-16T03:25:23.156468+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyPpj0369B06vx3GQPgx4P ENCSR065XVO https://www.encodeproject.org/experiments/ENCSR065XVO transcription factor CHAMP1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF432NAV https://www.encodeproject.org/files/ENCFF432NAV/@@download/ENCFF432NAV.bam ENCFF769FYR https://www.encodeproject.org/files/ENCFF769FYR/@@download/ENCFF769FYR.bam 88.5 M 0 83.8 M 0.946 PE 100 100 native 36.3 M 0.0 M 32.2 M 0.727 0.90 0.90 9.95 220 1.07 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/6069ae71-6b23-4dbc-b8e0-fd6917a71556/@@download/cross_correlation_plot/ENCFF740JJXENCFF507REW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB140LPS michael-snyder:L-1761 "ENCFF507REW,ENCFF740JJX" HiSeq 4000 2016-09-16T03:21:22.179944+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyPyQ0369JpJK47VQg9x0Q ENCSR000EHD https://www.encodeproject.org/experiments/ENCSR000EHD "RNA binding protein,transcription factor" CHD2-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF699ZAV https://www.encodeproject.org/files/ENCFF699ZAV/@@download/ENCFF699ZAV.bam ENCFF072EPY https://www.encodeproject.org/files/ENCFF072EPY/@@download/ENCFF072EPY.bam 24.8 M 0 22.6 M 0.913 SE 36 36 native 0.0 M 17.1 M 16.0 M 0.646 0.94 0.97 52.27 120 1.33 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1c13153-75a8-46fc-84b2-dca7dfd5a492/@@download/cross_correlation_plot/ENCFF000YJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADK ENCFF000YJT Illumina Genome Analyzer 2016-12-11T04:53:50.515611+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667J003697yz601ypVJ3qq ENCSR000EHD https://www.encodeproject.org/experiments/ENCSR000EHD "RNA binding protein,transcription factor" CHD2-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF304KIE https://www.encodeproject.org/files/ENCFF304KIE/@@download/ENCFF304KIE.bam ENCFF790ZVP https://www.encodeproject.org/files/ENCFF790ZVP/@@download/ENCFF790ZVP.bam 24.6 M 0 23.1 M 0.940 SE 36 36 native 0.0 M 17.2 M 16.6 M 0.674 0.96 0.98 47.36 140 1.19 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd49d8eb-465f-45ca-a407-ed72beca1a69/@@download/cross_correlation_plot/ENCFF000YJU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARL ENCFF000YJU Illumina Genome Analyzer 2016-12-11T04:55:46.210331+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667X80369KbxV61z4GFvxQ ENCSR109YGM https://www.encodeproject.org/experiments/ENCSR109YGM transcription factor CREB3L1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF405YCF https://www.encodeproject.org/files/ENCFF405YCF/@@download/ENCFF405YCF.bam ENCFF465XCK https://www.encodeproject.org/files/ENCFF465XCK/@@download/ENCFF465XCK.bam 56.3 M 0 52.9 M 0.939 PE 100 100 native 23.8 M 0.0 M 18.2 M 0.646 0.77 0.76 3.98 220 1.11 4.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/b88c2742-5e54-4456-abbf-de0ca8e5e619/@@download/cross_correlation_plot/ENCFF002EINENCFF002EIS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB488XXX michael-snyder:809_B_TruSeq_ATCACG "ENCFF002EIS,ENCFF002EIN" HiSeq 2000 2016-10-29T18:04:33.703540+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B253Q0jv1xYX7855VG0J9y ENCSR109YGM https://www.encodeproject.org/experiments/ENCSR109YGM transcription factor CREB3L1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF358SSM https://www.encodeproject.org/files/ENCFF358SSM/@@download/ENCFF358SSM.bam ENCFF926PJS https://www.encodeproject.org/files/ENCFF926PJS/@@download/ENCFF926PJS.bam 57.8 M 0 55.0 M 0.952 PE 100 100 native 24.7 M 0.0 M 19.3 M 0.667 0.78 0.78 4.33 240 1.18 2.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/466cf858-1179-4c3d-b65d-f03d2065822a/@@download/cross_correlation_plot/ENCFF002EITENCFF002EIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB300HOB michael-snyder:809_B_TruSeq_CGATGT "ENCFF002EIQ,ENCFF002EIT" HiSeq 2000 2016-10-29T18:03:34.708070+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B256Q0jv1vZv5fZ4xvzGxp ENCSR402XII https://www.encodeproject.org/experiments/ENCSR402XII RNA binding protein CSDE1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF515NUR https://www.encodeproject.org/files/ENCFF515NUR/@@download/ENCFF515NUR.bam ENCFF569VJP https://www.encodeproject.org/files/ENCFF569VJP/@@download/ENCFF569VJP.bam 121.1 M 0 117.5 M 0.970 PE 100 100 native 51.0 M 0.0 M 45.9 M 0.758 0.90 0.90 9.87 225 1.05 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/969a7ffc-4152-4068-a80f-57f80eb886b5/@@download/cross_correlation_plot/ENCFF940EGQENCFF255NDV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB922NZS michael-snyder:L-1796 "ENCFF940EGQ,ENCFF255NDV" HiSeq 4000 2016-09-16T03:21:10.509150+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypP0036945x1X1GjJQQ0X ENCSR402XII https://www.encodeproject.org/experiments/ENCSR402XII RNA binding protein CSDE1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF993QLY https://www.encodeproject.org/files/ENCFF993QLY/@@download/ENCFF993QLY.bam ENCFF049HMA https://www.encodeproject.org/files/ENCFF049HMA/@@download/ENCFF049HMA.bam 86.9 M 0 84.4 M 0.971 PE 100 100 native 36.7 M 0.0 M 31.0 M 0.713 0.84 0.84 6.25 215 1.07 2.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4cd2f79-e1cc-4616-a109-4c54767b5683/@@download/cross_correlation_plot/ENCFF265YIHENCFF213FVU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB279IWB michael-snyder:L-1797 "ENCFF213FVU,ENCFF265YIH" HiSeq 4000 2016-09-16T03:19:35.581371+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypVj0369GX4Qp1Gv142PX ENCSR626QJQ https://www.encodeproject.org/experiments/ENCSR626QJQ RNA binding protein CSDE1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF746ASI https://www.encodeproject.org/files/ENCFF746ASI/@@download/ENCFF746ASI.bam ENCFF701MUQ https://www.encodeproject.org/files/ENCFF701MUQ/@@download/ENCFF701MUQ.bam 59.1 M 0 58.0 M 0.981 PE 100 100 native 25.6 M 0.0 M 24.2 M 0.818 0.94 0.94 17.84 205 1.06 5.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/d72b2605-2945-42cf-94c2-532fcc3f3061/@@download/cross_correlation_plot/ENCFF083CSAENCFF042ZPU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB857BOS michael-snyder:L-1843 "ENCFF083CSA,ENCFF042ZPU" HiSeq 2000 2016-10-09T17:13:49.461609+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vZQ0jv1XvFGkBjjfjQ25 ENCSR626QJQ https://www.encodeproject.org/experiments/ENCSR626QJQ RNA binding protein CSDE1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF864RNL https://www.encodeproject.org/files/ENCFF864RNL/@@download/ENCFF864RNL.bam ENCFF992YGA https://www.encodeproject.org/files/ENCFF992YGA/@@download/ENCFF992YGA.bam 57.9 M 0 56.9 M 0.982 PE 100 100 native 25.1 M 0.0 M 24.1 M 0.833 0.96 0.96 25.58 205 1.06 5.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/319522d0-d5c0-4971-b68f-019f954c7e2f/@@download/cross_correlation_plot/ENCFF270QZWENCFF910CUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB814QOY michael-snyder:L-1844 "ENCFF910CUI,ENCFF270QZW" HiSeq 2000 2016-10-09T17:13:54.282565+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vf00jv1xPyfX78Yz4gYq ENCSR201NQZ https://www.encodeproject.org/experiments/ENCSR201NQZ "transcription factor,chromatin remodeller" CTBP1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF809OVE https://www.encodeproject.org/files/ENCFF809OVE/@@download/ENCFF809OVE.bam ENCFF646WCS https://www.encodeproject.org/files/ENCFF646WCS/@@download/ENCFF646WCS.bam 79.8 M 0 74.8 M 0.937 PE 100 100 native 33.1 M 0.0 M 31.9 M 0.800 0.97 0.97 29.29 230 1.19 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/248d9dde-96c7-41a6-a025-d63c018d4ea3/@@download/cross_correlation_plot/ENCFF829YQDENCFF077DIB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB774PTZ michael-snyder:L-348 "ENCFF829YQD,ENCFF077DIB" HiSeq 2000 2016-10-27T22:34:01.709791+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bb0j0369PQyG3V5B45017 ENCSR201NQZ https://www.encodeproject.org/experiments/ENCSR201NQZ "transcription factor,chromatin remodeller" CTBP1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF331BYU https://www.encodeproject.org/files/ENCFF331BYU/@@download/ENCFF331BYU.bam ENCFF576WJI https://www.encodeproject.org/files/ENCFF576WJI/@@download/ENCFF576WJI.bam 77.4 M 0 75.9 M 0.981 PE 100 100 native 34.3 M 0.0 M 32.6 M 0.843 0.95 0.95 20.99 190 1.10 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/d36bdf75-d53e-4d66-b3b1-6c39219173f4/@@download/cross_correlation_plot/ENCFF034WZZENCFF350AMO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB493DRJ michael-snyder:L-418 "ENCFF350AMO,ENCFF034WZZ" HiSeq 2000 2016-10-27T22:31:04.632258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bb4803697KPkyX9BPQF1k ENCSR000EGM https://www.encodeproject.org/experiments/ENCSR000EGM "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF198CVB https://www.encodeproject.org/files/ENCFF198CVB/@@download/ENCFF198CVB.bam ENCFF442SVG https://www.encodeproject.org/files/ENCFF442SVG/@@download/ENCFF442SVG.bam 33.9 M 0 33.1 M 0.977 SE 36 36 None 0.0 M 26.1 M 22.0 M 0.648 0.85 0.87 8.16 110 2.06 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/66defdbe-963b-4ac9-9e1b-cd22edc565c5/@@download/cross_correlation_plot/ENCFF000YLW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIN ENCFF000YLW Illumina Genome Analyzer 2016-07-28T00:32:26.666542+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYb3Q03695kFGBYkGK8p9q ENCSR000EGM https://www.encodeproject.org/experiments/ENCSR000EGM "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF488CXC https://www.encodeproject.org/files/ENCFF488CXC/@@download/ENCFF488CXC.bam ENCFF650KWF https://www.encodeproject.org/files/ENCFF650KWF/@@download/ENCFF650KWF.bam 33.1 M 0 32.5 M 0.983 SE 36 36 None 0.0 M 25.5 M 22.6 M 0.682 0.89 0.90 11.18 115 1.72 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce784fda-1397-43d1-abd2-738a67b557be/@@download/cross_correlation_plot/ENCFF000YLY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVT ENCFF000YLY Illumina Genome Analyzer 2016-07-28T00:32:45.366029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYb5Q03697GbqkgJGPb7pK ENCSR030TJP https://www.encodeproject.org/experiments/ENCSR030TJP transcription factor DACH1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF521MLQ https://www.encodeproject.org/files/ENCFF521MLQ/@@download/ENCFF521MLQ.bam ENCFF168IPB https://www.encodeproject.org/files/ENCFF168IPB/@@download/ENCFF168IPB.bam 50.4 M 0 49.5 M 0.981 PE 100 100 native 21.8 M 0.0 M 20.8 M 0.824 0.95 0.95 21.00 200 1.10 2.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/691cf09a-d77f-4b10-9a96-c3b55e09a0ed/@@download/cross_correlation_plot/ENCFF402INYENCFF340IWG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB982GYY michael-snyder:L-2947 "ENCFF340IWG,ENCFF402INY" HiSeq 2000 2017-02-22T05:24:06.220351+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Z3j03694kPfQKJ90GY55 ENCSR030TJP https://www.encodeproject.org/experiments/ENCSR030TJP transcription factor DACH1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF804JSK https://www.encodeproject.org/files/ENCFF804JSK/@@download/ENCFF804JSK.bam ENCFF014CPX https://www.encodeproject.org/files/ENCFF014CPX/@@download/ENCFF014CPX.bam 65.0 M 0 63.5 M 0.976 PE 100 100 native 27.9 M 0.0 M 25.5 M 0.785 0.92 0.92 11.84 185 1.09 2.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/86760a11-e799-449c-a10b-16b5a3482133/@@download/cross_correlation_plot/ENCFF329ZRMENCFF504ZSA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB677GGO michael-snyder:L-2948 "ENCFF329ZRM,ENCFF504ZSA" HiSeq 2000 2017-02-22T05:24:28.423421+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Z780369505Kq3Jk5vY3Y ENCSR446LAV https://www.encodeproject.org/experiments/ENCSR446LAV "RNA binding protein,transcription factor" DDX20-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF562ATM https://www.encodeproject.org/files/ENCFF562ATM/@@download/ENCFF562ATM.bam ENCFF522QSE https://www.encodeproject.org/files/ENCFF522QSE/@@download/ENCFF522QSE.bam 46.9 M 0 45.6 M 0.973 PE 100 100 native 20.0 M 0.0 M 17.2 M 0.735 0.86 0.86 7.08 220 1.20 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc2cacbf-dd43-4f36-b726-be53c8f2ae37/@@download/cross_correlation_plot/ENCFF771DFRENCFF931EDX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB692OES michael-snyder:L-187 "ENCFF771DFR,ENCFF931EDX" HiSeq 2000 2016-10-09T17:11:13.150294+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gf00jv1zBYbxYJ5zzyvX ENCSR446LAV https://www.encodeproject.org/experiments/ENCSR446LAV "RNA binding protein,transcription factor" DDX20-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF546ZLD https://www.encodeproject.org/files/ENCFF546ZLD/@@download/ENCFF546ZLD.bam ENCFF256ZQB https://www.encodeproject.org/files/ENCFF256ZQB/@@download/ENCFF256ZQB.bam 54.8 M 0 53.7 M 0.979 PE 100 100 native 23.6 M 0.0 M 18.0 M 0.656 0.76 0.76 4.09 200 1.21 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/e023060a-9906-46cd-83a1-8385c00f531c/@@download/cross_correlation_plot/ENCFF881HGOENCFF071FDG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712CAM michael-snyder:L-188 "ENCFF071FDG,ENCFF881HGO" HiSeq 2000 2016-10-09T17:11:22.854889+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3ggQ0jv1vY92b0GYjVFKy ENCSR715CCR https://www.encodeproject.org/experiments/ENCSR715CCR transcription factor DPF2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF990RGE https://www.encodeproject.org/files/ENCFF990RGE/@@download/ENCFF990RGE.bam ENCFF558VZG https://www.encodeproject.org/files/ENCFF558VZG/@@download/ENCFF558VZG.bam 56.1 M 0 54.9 M 0.978 PE 100 100 native 24.1 M 0.0 M 22.5 M 0.804 0.94 0.94 15.59 205 1.31 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/7dee2170-db8c-424c-bbe7-f289b282c08b/@@download/cross_correlation_plot/ENCFF579BJGENCFF031JCO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB708CTN michael-snyder:L-227 "ENCFF579BJG,ENCFF031JCO" HiSeq 2000 2016-10-09T17:03:54.902137+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44J00jv1zBYbxYJ5zzz9B ENCSR715CCR https://www.encodeproject.org/experiments/ENCSR715CCR transcription factor DPF2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF205JWI https://www.encodeproject.org/files/ENCFF205JWI/@@download/ENCFF205JWI.bam ENCFF769IXF https://www.encodeproject.org/files/ENCFF769IXF/@@download/ENCFF769IXF.bam 58.7 M 0 57.1 M 0.973 PE 100 100 native 24.7 M 0.0 M 23.8 M 0.810 0.96 0.96 27.86 200 1.24 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c8ae122-d526-44b7-abf5-a5032f441f87/@@download/cross_correlation_plot/ENCFF389HJOENCFF290HFY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB882FCY michael-snyder:L-228 "ENCFF389HJO,ENCFF290HFY" HiSeq 2000 2016-10-09T17:03:59.134350+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44Kj0jv1XvFGkBjjfjQBX ENCSR875OOP https://www.encodeproject.org/experiments/ENCSR875OOP transcription factor DR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF100VBU https://www.encodeproject.org/files/ENCFF100VBU/@@download/ENCFF100VBU.bam ENCFF990MXS https://www.encodeproject.org/files/ENCFF990MXS/@@download/ENCFF990MXS.bam 68.5 M 0 67.0 M 0.979 PE 100 100 native 29.7 M 0.0 M 27.1 M 0.793 0.91 0.91 11.37 210 1.07 3.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/88767888-bf62-4e5b-8290-eadeddde4f92/@@download/cross_correlation_plot/ENCFF743CBTENCFF240AHG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB237LHN michael-snyder:L-1798 "ENCFF743CBT,ENCFF240AHG" HiSeq 2000 2016-10-09T17:38:08.189404+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ZfQ0jv1XvFGkBjjfjQxF ENCSR875OOP https://www.encodeproject.org/experiments/ENCSR875OOP transcription factor DR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF441SBA https://www.encodeproject.org/files/ENCFF441SBA/@@download/ENCFF441SBA.bam ENCFF689CXE https://www.encodeproject.org/files/ENCFF689CXE/@@download/ENCFF689CXE.bam 50.6 M 0 49.0 M 0.967 PE 100 100 native 21.6 M 0.0 M 20.3 M 0.803 0.94 0.94 16.46 205 1.10 2.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/69768843-d76c-4836-a3ad-be022621a409/@@download/cross_correlation_plot/ENCFF531RMPENCFF915KQF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB625OQJ michael-snyder:L-1799 "ENCFF915KQF,ENCFF531RMP" HiSeq 2000 2016-10-09T17:36:55.948332+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Zj00jv1XvFGkBjjfjQxY ENCSR563LLO https://www.encodeproject.org/experiments/ENCSR563LLO transcription factor E2F1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF846CYU https://www.encodeproject.org/files/ENCFF846CYU/@@download/ENCFF846CYU.bam ENCFF606KRZ https://www.encodeproject.org/files/ENCFF606KRZ/@@download/ENCFF606KRZ.bam 37.0 M 0 36.1 M 0.976 PE 100 100 native 15.8 M 0.0 M 12.7 M 0.687 0.81 0.81 5.15 235 1.15 3.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/ded9b39b-2221-4762-885b-53bd21664a7b/@@download/cross_correlation_plot/ENCFF749JUGENCFF942QFN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB809EWT michael-snyder:L-1718 "ENCFF942QFN,ENCFF749JUG" HiSeq 2000 2017-01-26T00:26:29.813619+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K93803698k8BZGpKx02x6 ENCSR563LLO https://www.encodeproject.org/experiments/ENCSR563LLO transcription factor E2F1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF226KOW https://www.encodeproject.org/files/ENCFF226KOW/@@download/ENCFF226KOW.bam ENCFF757DMU https://www.encodeproject.org/files/ENCFF757DMU/@@download/ENCFF757DMU.bam 54.1 M 0 53.1 M 0.981 PE 100 100 native 23.2 M 0.0 M 19.6 M 0.726 0.85 0.84 6.28 230 1.12 2.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/216da630-4f00-4972-baef-1882636bd42e/@@download/cross_correlation_plot/ENCFF907JIEENCFF399CCC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB250QWI michael-snyder:L-1719 "ENCFF399CCC,ENCFF907JIE" HiSeq 2000 2017-01-26T00:25:26.947011+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9fQ036937yFgPVXB72q4 ENCSR731LHZ https://www.encodeproject.org/experiments/ENCSR731LHZ transcription factor E4F1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF978NVP https://www.encodeproject.org/files/ENCFF978NVP/@@download/ENCFF978NVP.bam ENCFF609YEW https://www.encodeproject.org/files/ENCFF609YEW/@@download/ENCFF609YEW.bam 42.4 M 0 40.7 M 0.958 PE 100 100 native 18.0 M 0.0 M 15.9 M 0.748 0.88 0.88 8.40 240 1.38 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/3192b2be-6936-4ed5-a660-e6ed4e823ae4/@@download/cross_correlation_plot/ENCFF772FZXENCFF603CIN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB642OCU michael-snyder:L-223 "ENCFF772FZX,ENCFF603CIN" HiSeq 2000 2016-10-09T17:07:50.418607+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69Y00jv1k3ZgZP0qqvy9Z ENCSR731LHZ https://www.encodeproject.org/experiments/ENCSR731LHZ transcription factor E4F1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF606IOS https://www.encodeproject.org/files/ENCFF606IOS/@@download/ENCFF606IOS.bam ENCFF814RLQ https://www.encodeproject.org/files/ENCFF814RLQ/@@download/ENCFF814RLQ.bam 63.3 M 0 60.5 M 0.957 PE 100 100 native 26.6 M 0.0 M 21.5 M 0.678 0.82 0.82 5.40 225 1.27 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/91f57d3f-87e1-4f47-9470-ca5e95b09574/@@download/cross_correlation_plot/ENCFF301GHTENCFF243UPQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB902ALU michael-snyder:L-224 "ENCFF301GHT,ENCFF243UPQ" HiSeq 2000 2016-10-09T17:09:12.011966+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69b80jv1q5825v91XY32Z ENCSR024CNP https://www.encodeproject.org/experiments/ENCSR024CNP transcription factor EGR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF528YNP https://www.encodeproject.org/files/ENCFF528YNP/@@download/ENCFF528YNP.bam ENCFF316YDL https://www.encodeproject.org/files/ENCFF316YDL/@@download/ENCFF316YDL.bam 75.0 M 0 72.9 M 0.971 PE 100 100 native 31.4 M 0.0 M 28.8 M 0.767 0.92 0.92 11.78 180 1.30 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/070a4140-5d82-4993-b1ae-ab38c9b01d10/@@download/cross_correlation_plot/ENCFF025AGMENCFF751XCN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB345UGA michael-snyder:L-2945 "ENCFF751XCN,ENCFF025AGM" HiSeq 2000 2017-02-22T05:25:41.379258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5YXQ0369Pxz1G3pPgxjQ2 ENCSR024CNP https://www.encodeproject.org/experiments/ENCSR024CNP transcription factor EGR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF431IVA https://www.encodeproject.org/files/ENCFF431IVA/@@download/ENCFF431IVA.bam ENCFF234MFX https://www.encodeproject.org/files/ENCFF234MFX/@@download/ENCFF234MFX.bam 57.9 M 0 55.8 M 0.964 PE 100 100 native 24.0 M 0.0 M 19.9 M 0.687 0.83 0.83 5.64 185 1.34 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd12aaf0-3e11-4f4e-8ef5-44c4119a27af/@@download/cross_correlation_plot/ENCFF871VWHENCFF045QIG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB428KJP michael-snyder:L-2946 "ENCFF045QIG,ENCFF871VWH" HiSeq 2000 2017-02-22T05:23:41.377465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Yfj036951XgQKGZX8569 ENCSR175EOM https://www.encodeproject.org/experiments/ENCSR175EOM "transcription factor,chromatin remodeller" EHMT2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF874LOC https://www.encodeproject.org/files/ENCFF874LOC/@@download/ENCFF874LOC.bam ENCFF269FDU https://www.encodeproject.org/files/ENCFF269FDU/@@download/ENCFF269FDU.bam 71.8 M 0 67.3 M 0.937 PE 100 100 native 29.4 M 0.0 M 28.3 M 0.788 0.96 0.96 28.25 185 1.13 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/a42f53ea-be62-43b1-ac24-ed577b25974d/@@download/cross_correlation_plot/ENCFF698YEBENCFF844OMR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB035POL michael-snyder:L-2919 "ENCFF698YEB,ENCFF844OMR" HiSeq 2000 2017-01-28T05:05:42.231479+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k61003695Q259664kQvzY ENCSR175EOM https://www.encodeproject.org/experiments/ENCSR175EOM "transcription factor,chromatin remodeller" EHMT2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF083HDY https://www.encodeproject.org/files/ENCFF083HDY/@@download/ENCFF083HDY.bam ENCFF386NMZ https://www.encodeproject.org/files/ENCFF386NMZ/@@download/ENCFF386NMZ.bam 69.5 M 0 64.0 M 0.921 PE 100 100 native 27.7 M 0.0 M 26.4 M 0.759 0.95 0.95 21.03 170 1.11 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/b85a6030-a493-485f-9c39-a6fbee8fc1f5/@@download/cross_correlation_plot/ENCFF611URCENCFF173LQG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB911RON michael-snyder:L-2920 "ENCFF611URC,ENCFF173LQG" HiSeq 2000 2017-01-28T05:05:04.107261+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k66j0369K2b5QJ1587yKy ENCSR502OEK https://www.encodeproject.org/experiments/ENCSR502OEK transcription factor ELF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF784MTZ https://www.encodeproject.org/files/ENCFF784MTZ/@@download/ENCFF784MTZ.bam ENCFF713WWL https://www.encodeproject.org/files/ENCFF713WWL/@@download/ENCFF713WWL.bam 50.5 M 0 46.3 M 0.917 PE 100 100 native 20.5 M 0.0 M 19.1 M 0.758 0.93 0.93 15.06 240 1.17 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/78297368-a438-402a-a392-80dbf8bfbaec/@@download/cross_correlation_plot/ENCFF132GWNENCFF456MJL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB183AFP michael-snyder:L-2021 "ENCFF456MJL,ENCFF132GWN" HiSeq 2000 2016-10-09T17:37:06.794723+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kF00jv1pBzjzVx0B7f35 ENCSR502OEK https://www.encodeproject.org/experiments/ENCSR502OEK transcription factor ELF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF477CYZ https://www.encodeproject.org/files/ENCFF477CYZ/@@download/ENCFF477CYZ.bam ENCFF561PIE https://www.encodeproject.org/files/ENCFF561PIE/@@download/ENCFF561PIE.bam 52.7 M 0 49.6 M 0.941 PE 100 100 native 22.0 M 0.0 M 20.9 M 0.794 0.95 0.95 21.33 225 1.14 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/f936baaa-154a-4563-9863-a262bdae451b/@@download/cross_correlation_plot/ENCFF932JXGENCFF070OBA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB181VJH michael-snyder:L-2022 "ENCFF932JXG,ENCFF070OBA" HiSeq 2000 2016-10-09T17:37:23.346361+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kJ00jv1YvGVzF100Zf54 ENCSR638QHV https://www.encodeproject.org/experiments/ENCSR638QHV transcription factor ELF4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF339RWU https://www.encodeproject.org/files/ENCFF339RWU/@@download/ENCFF339RWU.bam ENCFF039TGK https://www.encodeproject.org/files/ENCFF039TGK/@@download/ENCFF039TGK.bam 53.0 M 0 52.0 M 0.982 PE 100 100 native 23.2 M 0.0 M 17.9 M 0.677 0.77 0.77 4.23 220 1.22 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bad3226-39e1-40cf-beee-fe166b92ae5e/@@download/cross_correlation_plot/ENCFF587AYWENCFF625HJX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB492XWJ michael-snyder:L-1800 "ENCFF587AYW,ENCFF625HJX" HiSeq 2000 2016-10-09T17:05:26.228330+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6GKj0jv1fvz446Zf2J5xV ENCSR638QHV https://www.encodeproject.org/experiments/ENCSR638QHV transcription factor ELF4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF958WMW https://www.encodeproject.org/files/ENCFF958WMW/@@download/ENCFF958WMW.bam ENCFF921IIJ https://www.encodeproject.org/files/ENCFF921IIJ/@@download/ENCFF921IIJ.bam 32.9 M 0 32.3 M 0.982 PE 100 100 native 14.3 M 0.0 M 12.9 M 0.782 0.90 0.90 9.97 215 1.22 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c2b6ba4-11ba-481e-a54f-fd3f1f2998f4/@@download/cross_correlation_plot/ENCFF270PKYENCFF029HOW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB861IEP michael-snyder:L-1801 "ENCFF270PKY,ENCFF029HOW" HiSeq 2000 2016-10-09T17:05:04.925992+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6GV80jv1YFyQ90J3z9ybx ENCSR000EGE https://www.encodeproject.org/experiments/ENCSR000EGE transcription factor EP300-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF982AFE https://www.encodeproject.org/files/ENCFF982AFE/@@download/ENCFF982AFE.bam ENCFF883XER https://www.encodeproject.org/files/ENCFF883XER/@@download/ENCFF883XER.bam 32.0 M 0 29.3 M 0.918 SE 36 36 native 0.0 M 22.9 M 20.9 M 0.654 0.92 0.92 11.98 125 1.16 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9c554dc-9901-4419-aeba-1d349d2af5ec/@@download/cross_correlation_plot/ENCFF000YVM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHG ENCFF000YVM Illumina Genome Analyzer 2016-12-11T02:28:46.217450+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163kJ003699Z3Y8493qbpyZ ENCSR000EGE https://www.encodeproject.org/experiments/ENCSR000EGE transcription factor EP300-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF200PYZ https://www.encodeproject.org/files/ENCFF200PYZ/@@download/ENCFF200PYZ.bam ENCFF566CML https://www.encodeproject.org/files/ENCFF566CML/@@download/ENCFF566CML.bam 32.9 M 0 31.7 M 0.962 SE 36 36 native 0.0 M 25.0 M 22.7 M 0.690 0.91 0.92 12.14 125 1.33 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/68c5fe49-67e3-4fd6-8cf9-d0db159b385b/@@download/cross_correlation_plot/ENCFF000YVO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHF ENCFF000YVO Illumina Genome Analyzer 2016-12-11T02:29:18.445433+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163kX8036933PVVJ7Qq01KJ ENCSR000EGY https://www.encodeproject.org/experiments/ENCSR000EGY transcription factor EP300-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF419COX https://www.encodeproject.org/files/ENCFF419COX/@@download/ENCFF419COX.bam ENCFF708ZJO https://www.encodeproject.org/files/ENCFF708ZJO/@@download/ENCFF708ZJO.bam 27.8 M 0 1.8 M 0.066 SE 36 36 native 0.0 M 0.2 M 0.2 M 0.008 1.00 1.00 1115.01 -135 1.03 -1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/47ac0380-8025-4b97-8973-36d687eb059c/@@download/cross_correlation_plot/ENCFF000YWT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHC ENCFF000YWT Illumina Genome Analyzer 2016-12-11T02:52:13.381985+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1649q003695Kj1j8qPQgkYk ENCSR000EGY https://www.encodeproject.org/experiments/ENCSR000EGY transcription factor EP300-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF362KLU https://www.encodeproject.org/files/ENCFF362KLU/@@download/ENCFF362KLU.bam ENCFF485LXI https://www.encodeproject.org/files/ENCFF485LXI/@@download/ENCFF485LXI.bam 31.3 M 0 27.7 M 0.887 SE 36 36 native 0.0 M 20.9 M 18.2 M 0.581 0.87 0.87 7.29 110 1.04 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/7680e702-ad76-4c50-a402-88802dea1a3b/@@download/cross_correlation_plot/ENCFF000YWU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AII ENCFF000YWU Illumina Genome Analyzer 2016-12-11T03:09:27.844769+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1649zj03697vfpg2qKbyZV3 ENCSR486IFJ https://www.encodeproject.org/experiments/ENCSR486IFJ transcription factor ESRRA-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF857YYV https://www.encodeproject.org/files/ENCFF857YYV/@@download/ENCFF857YYV.bam ENCFF957ZDE https://www.encodeproject.org/files/ENCFF957ZDE/@@download/ENCFF957ZDE.bam 67.6 M 0 65.1 M 0.963 PE 100 100 native 29.4 M 0.0 M 26.8 M 0.793 0.91 0.91 11.28 170 1.27 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/61148f48-df58-451b-bde2-ea13c7401b8e/@@download/cross_correlation_plot/ENCFF002DOXENCFF002EFV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB180ZTB michael-snyder:672_B_TruSeq_TTAGGC "ENCFF002EFV,ENCFF002DOX" HiSeq 2000 2016-10-09T17:05:50.248953+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41VQ0jv1g5yGjfvVx0Kxq ENCSR486IFJ https://www.encodeproject.org/experiments/ENCSR486IFJ transcription factor ESRRA-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF320WXN https://www.encodeproject.org/files/ENCFF320WXN/@@download/ENCFF320WXN.bam ENCFF469LYX https://www.encodeproject.org/files/ENCFF469LYX/@@download/ENCFF469LYX.bam 70.5 M 0 65.3 M 0.927 PE 100 100 native 29.5 M 0.0 M 19.6 M 0.555 0.67 0.66 2.80 245 1.17 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e7568ef-04c3-4fde-beb1-12a326ff4fc3/@@download/cross_correlation_plot/ENCFF002DUBENCFF002DOY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB650BRJ michael-snyder:705_B_TruSeq_CGATGT "ENCFF002DOY,ENCFF002DUB" HiSeq 2000 2016-10-09T17:05:43.843346+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41Y80jv1zBYbxYJ5zzz60 ENCSR124BJR https://www.encodeproject.org/experiments/ENCSR124BJR transcription factor ETV6-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF003FNG https://www.encodeproject.org/files/ENCFF003FNG/@@download/ENCFF003FNG.bam ENCFF807KWU https://www.encodeproject.org/files/ENCFF807KWU/@@download/ENCFF807KWU.bam 30.7 M 0 27.3 M 0.890 SE 36 36 native 0.0 M 20.7 M 19.4 M 0.631 0.94 0.94 16.83 110 1.05 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a344b95-2e86-4770-aff8-adad8549deaf/@@download/cross_correlation_plot/ENCFF002EEK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB247PDR michael-snyder:ETV6_sc-166835_K562_Rep1 ENCFF002EEK Illumina Genome Analyzer IIx 2016-10-08T07:48:13.798318+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbJPj0jv1ZZ7QvzQX049jq ENCSR124BJR https://www.encodeproject.org/experiments/ENCSR124BJR transcription factor ETV6-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF417FHN https://www.encodeproject.org/files/ENCFF417FHN/@@download/ENCFF417FHN.bam ENCFF373SHV https://www.encodeproject.org/files/ENCFF373SHV/@@download/ENCFF373SHV.bam 28.8 M 0 25.9 M 0.898 SE 36 36 native 0.0 M 19.9 M 18.0 M 0.625 0.91 0.91 10.78 135 1.03 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/94172f03-7ed9-412a-a254-772d8ceac3f1/@@download/cross_correlation_plot/ENCFF002EEB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB365UJY michael-snyder:ETV6_sc-166835_K562_Rep2 ENCFF002EEB Illumina Genome Analyzer IIx 2016-10-08T07:47:45.790307+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbJVj0jv1XGZPJj8YpxPJf ENCSR066RPX https://www.encodeproject.org/experiments/ENCSR066RPX "transcription factor,RNA binding protein" EWSR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF310NQZ https://www.encodeproject.org/files/ENCFF310NQZ/@@download/ENCFF310NQZ.bam ENCFF235YPD https://www.encodeproject.org/files/ENCFF235YPD/@@download/ENCFF235YPD.bam 56.9 M 0 46.6 M 0.819 PE 100 100 native 20.4 M 0.0 M 18.5 M 0.649 0.91 0.91 10.54 190 1.10 4.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce486be5-4541-4a89-9de9-2e31554588b7/@@download/cross_correlation_plot/ENCFF060MKWENCFF213JXQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB064EYR michael-snyder:L-2905 "ENCFF213JXQ,ENCFF060MKW" HiSeq 2000 2017-01-28T05:04:03.155999+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k5V003695Q259664kQvz8 ENCSR066RPX https://www.encodeproject.org/experiments/ENCSR066RPX "transcription factor,RNA binding protein" EWSR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF627MSF https://www.encodeproject.org/files/ENCFF627MSF/@@download/ENCFF627MSF.bam ENCFF153RTI https://www.encodeproject.org/files/ENCFF153RTI/@@download/ENCFF153RTI.bam 58.1 M 0 51.5 M 0.887 PE 100 100 native 22.6 M 0.0 M 21.3 M 0.734 0.94 0.94 17.70 185 1.09 4.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/2016f48f-10a6-446e-8f22-7cddf64037e7/@@download/cross_correlation_plot/ENCFF464AWRENCFF760RIF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB218ZBC michael-snyder:L-2906 "ENCFF464AWR,ENCFF760RIF" HiSeq 2000 2017-01-28T05:03:58.600107+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k5fj0369JjvFg6692KzgZ ENCSR142YYA https://www.encodeproject.org/experiments/ENCSR142YYA "transcription factor,RNA binding protein" EWSR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF603TYQ https://www.encodeproject.org/files/ENCFF603TYQ/@@download/ENCFF603TYQ.bam ENCFF557GGR https://www.encodeproject.org/files/ENCFF557GGR/@@download/ENCFF557GGR.bam 70.2 M 0 58.5 M 0.834 PE 100 100 native 25.0 M 0.0 M 19.2 M 0.547 0.77 0.77 4.31 200 1.08 4.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e2b25ea-df0a-410b-b8e1-cb47ee8fc999/@@download/cross_correlation_plot/ENCFF824PVSENCFF605BFZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB763AZX michael-snyder:L-2903 "ENCFF824PVS,ENCFF605BFZ" HiSeq 4000 2016-09-16T03:19:18.288324+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyp180369Fb155KvKP91Gj ENCSR142YYA https://www.encodeproject.org/experiments/ENCSR142YYA "transcription factor,RNA binding protein" EWSR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF753YTV https://www.encodeproject.org/files/ENCFF753YTV/@@download/ENCFF753YTV.bam ENCFF281DML https://www.encodeproject.org/files/ENCFF281DML/@@download/ENCFF281DML.bam 126.5 M 0 112.1 M 0.886 PE 100 100 native 49.0 M 0.0 M 38.2 M 0.604 0.78 0.78 4.31 195 1.05 4.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/2dfcaf07-5c77-4b57-8d84-2bcd7272db47/@@download/cross_correlation_plot/ENCFF510HXDENCFF377PHH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB785VBV michael-snyder:L-2904 "ENCFF377PHH,ENCFF510HXD" HiSeq 4000 2016-09-16T03:23:02.921690+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyp480369F7KPkXGKbg6X3 ENCSR819LHG https://www.encodeproject.org/experiments/ENCSR819LHG transcription factor FOXA1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF611PXX https://www.encodeproject.org/files/ENCFF611PXX/@@download/ENCFF611PXX.bam ENCFF009OHH https://www.encodeproject.org/files/ENCFF009OHH/@@download/ENCFF009OHH.bam 75.2 M 0 71.8 M 0.954 PE 100 100 native 28.7 M 0.0 M 25.8 M 0.685 0.90 0.90 9.51 200 1.06 7.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/3361811c-aeca-4af2-826e-537e2de135b6/@@download/cross_correlation_plot/ENCFF394CJBENCFF186GBM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB089LJO michael-snyder:L-2970 "ENCFF394CJB,ENCFF186GBM" HiSeq 2000 2016-10-27T22:21:00.649809+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bxfQ03695YX1xgJBKFkx9 ENCSR819LHG https://www.encodeproject.org/experiments/ENCSR819LHG transcription factor FOXA1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF364SJK https://www.encodeproject.org/files/ENCFF364SJK/@@download/ENCFF364SJK.bam ENCFF134FYL https://www.encodeproject.org/files/ENCFF134FYL/@@download/ENCFF134FYL.bam 60.9 M 0 57.7 M 0.947 PE 100 100 native 22.9 M 0.0 M 20.6 M 0.677 0.90 0.90 9.77 200 1.08 4.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/2750e319-fdc2-40f4-bf62-ddfa167ffe9d/@@download/cross_correlation_plot/ENCFF692TZIENCFF762YIW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB562CFQ michael-snyder:L-2971 "ENCFF762YIW,ENCFF692TZI" HiSeq 2000 2016-10-27T22:17:52.748311+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bxkj036923z1QYVBPp85K ENCSR302AWT https://www.encodeproject.org/experiments/ENCSR302AWT transcription factor FOXK2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF703CKR https://www.encodeproject.org/files/ENCFF703CKR/@@download/ENCFF703CKR.bam ENCFF919HNS https://www.encodeproject.org/files/ENCFF919HNS/@@download/ENCFF919HNS.bam 40.6 M 0 39.9 M 0.983 PE 100 100 native 17.6 M 0.0 M 16.5 M 0.812 0.94 0.94 16.08 195 1.15 2.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d474ee7-6f97-4a6b-b2dc-23085bc2b55a/@@download/cross_correlation_plot/ENCFF097VAHENCFF795LQA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB993DGG michael-snyder:L-162 "ENCFF795LQA,ENCFF097VAH" HiSeq 2000 2016-10-09T17:07:52.213420+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6B4j0jv1x3KYJK9kQ04gq ENCSR302AWT https://www.encodeproject.org/experiments/ENCSR302AWT transcription factor FOXK2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF931HHQ https://www.encodeproject.org/files/ENCFF931HHQ/@@download/ENCFF931HHQ.bam ENCFF172BUN https://www.encodeproject.org/files/ENCFF172BUN/@@download/ENCFF172BUN.bam 51.8 M 0 51.1 M 0.985 PE 100 100 native 22.5 M 0.0 M 21.7 M 0.836 0.96 0.96 27.18 200 1.14 2.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f116b0b-7af4-45db-8a4c-416fa52b3e69/@@download/cross_correlation_plot/ENCFF383GMFENCFF441GEH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB941GGD michael-snyder:L-179 "ENCFF441GEH,ENCFF383GMF" HiSeq 2000 2016-10-09T17:08:51.139823+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6B780jv1XpBpGXQxqxYQ6 ENCSR508DQA https://www.encodeproject.org/experiments/ENCSR508DQA transcription factor FOXK2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF373AFZ https://www.encodeproject.org/files/ENCFF373AFZ/@@download/ENCFF373AFZ.bam ENCFF718ARO https://www.encodeproject.org/files/ENCFF718ARO/@@download/ENCFF718ARO.bam 50.0 M 0 48.4 M 0.967 PE 100 100 native 20.9 M 0.0 M 18.6 M 0.746 0.89 0.89 9.11 165 1.24 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/12d769b5-f174-4612-adec-d9a3852d40e5/@@download/cross_correlation_plot/ENCFF260CTFENCFF959CFI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB318JMG michael-snyder:L-161 "ENCFF959CFI,ENCFF260CTF" HiSeq 2000 2016-10-09T17:12:43.512893+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vvQ0jv1xPyfX78Yz4gZP ENCSR508DQA https://www.encodeproject.org/experiments/ENCSR508DQA transcription factor FOXK2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF563FZR https://www.encodeproject.org/files/ENCFF563FZR/@@download/ENCFF563FZR.bam ENCFF156DFG https://www.encodeproject.org/files/ENCFF156DFG/@@download/ENCFF156DFG.bam 43.8 M 0 43.0 M 0.983 PE 100 100 native 18.9 M 0.0 M 18.2 M 0.831 0.96 0.96 25.74 235 1.20 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad59467b-d88c-4644-884f-b70e3c1b0ba1/@@download/cross_correlation_plot/ENCFF344DMAENCFF164JCA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB308QXN michael-snyder:L-178 "ENCFF344DMA,ENCFF164JCA" HiSeq 2000 2016-10-09T17:12:46.229645+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vy00jv1XvFGkBjjfjQ2Q ENCSR429QPP https://www.encodeproject.org/experiments/ENCSR429QPP transcription factor FOXM1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF182YDN https://www.encodeproject.org/files/ENCFF182YDN/@@download/ENCFF182YDN.bam ENCFF463IID https://www.encodeproject.org/files/ENCFF463IID/@@download/ENCFF463IID.bam 44.0 M 0 43.0 M 0.977 PE 100 100 native 19.2 M 0.0 M 14.7 M 0.670 0.77 0.77 4.22 220 1.21 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/255fa576-a6d2-4abe-90b0-14f664fe6bef/@@download/cross_correlation_plot/ENCFF167VUSENCFF007LTF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB006HES michael-snyder:L-281 "ENCFF007LTF,ENCFF167VUS" HiSeq 2000 2016-10-09T17:07:05.947602+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JPj0jv1XvFGkBjjfjQb4 ENCSR429QPP https://www.encodeproject.org/experiments/ENCSR429QPP transcription factor FOXM1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF855NIZ https://www.encodeproject.org/files/ENCFF855NIZ/@@download/ENCFF855NIZ.bam ENCFF066BXQ https://www.encodeproject.org/files/ENCFF066BXQ/@@download/ENCFF066BXQ.bam 60.0 M 0 58.4 M 0.975 PE 100 100 native 25.7 M 0.0 M 17.6 M 0.588 0.69 0.68 3.10 210 1.21 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d9607da-1a02-4edd-b7a5-70c306867c91/@@download/cross_correlation_plot/ENCFF888ZYMENCFF749GVI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB351DCF michael-snyder:L-282 "ENCFF749GVI,ENCFF888ZYM" HiSeq 2000 2016-10-09T17:07:24.565818+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JVQ0jv1QxJBfj5Zb2q04 ENCSR138YYY https://www.encodeproject.org/experiments/ENCSR138YYY transcription factor GABPB1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF183DVK https://www.encodeproject.org/files/ENCFF183DVK/@@download/ENCFF183DVK.bam ENCFF048GOD https://www.encodeproject.org/files/ENCFF048GOD/@@download/ENCFF048GOD.bam 64.5 M 0 63.3 M 0.981 PE 100 100 native 28.3 M 0.0 M 25.2 M 0.780 0.89 0.89 8.90 225 2.79 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/23daec48-5322-494c-98ff-782fc5be43ab/@@download/cross_correlation_plot/ENCFF887CDXENCFF504MVU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB299GQE michael-snyder:L-2059 "ENCFF504MVU,ENCFF887CDX" HiSeq 2000 2016-10-09T17:37:06.362572+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5zqj0jv1x3KYJK9kQ04Zz ENCSR138YYY https://www.encodeproject.org/experiments/ENCSR138YYY transcription factor GABPB1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF838GWC https://www.encodeproject.org/files/ENCFF838GWC/@@download/ENCFF838GWC.bam ENCFF329TLK https://www.encodeproject.org/files/ENCFF329TLK/@@download/ENCFF329TLK.bam 71.5 M 0 70.4 M 0.985 PE 100 100 native 31.6 M 0.0 M 26.6 M 0.745 0.84 0.84 6.23 240 2.83 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6a6ad77-cbe8-44b5-bc27-62fa0da7dd9a/@@download/cross_correlation_plot/ENCFF698RJTENCFF381AJO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB675PIJ michael-snyder:L-2060 "ENCFF381AJO,ENCFF698RJT" HiSeq 2000 2016-10-09T17:37:36.702925+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5zyQ0jv1x3KYJK9kQ04b7 ENCSR000EFT https://www.encodeproject.org/experiments/ENCSR000EFT transcription factor GATA1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF392GZX https://www.encodeproject.org/files/ENCFF392GZX/@@download/ENCFF392GZX.bam ENCFF355PTV https://www.encodeproject.org/files/ENCFF355PTV/@@download/ENCFF355PTV.bam 26.7 M 0 22.9 M 0.859 SE 36 28 28 0.0 M 16.4 M 14.6 M 0.547 0.89 0.89 9.18 115 1.27 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef107f2c-34d5-40be-8b68-8beb43254c92/@@download/cross_correlation_plot/ENCFF000YND-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJT ENCFF000YND Illumina Genome Analyzer 2017-01-05T21:22:40.439214+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7q5003699GG65G542pjZp ENCSR000EFT https://www.encodeproject.org/experiments/ENCSR000EFT transcription factor GATA1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF431ZVW https://www.encodeproject.org/files/ENCFF431ZVW/@@download/ENCFF431ZVW.bam ENCFF485XKZ https://www.encodeproject.org/files/ENCFF485XKZ/@@download/ENCFF485XKZ.bam 26.0 M 0 24.8 M 0.955 SE 36 28 28 0.0 M 17.8 M 15.1 M 0.581 0.85 0.85 6.25 110 1.12 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/93ed5cbf-1fe2-4044-a4c9-4269a308be61/@@download/cross_correlation_plot/ENCFF000YNF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADA ENCFF000YNF Illumina Genome Analyzer 2017-01-05T21:23:05.085550+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7qBQ0369Pyf0JG49f3355 ENCSR547LKC https://www.encodeproject.org/experiments/ENCSR547LKC transcription factor GATAD2B-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF918JWJ https://www.encodeproject.org/files/ENCFF918JWJ/@@download/ENCFF918JWJ.bam ENCFF204LAC https://www.encodeproject.org/files/ENCFF204LAC/@@download/ENCFF204LAC.bam 93.5 M 0 91.3 M 0.976 PE 100 100 native 40.8 M 0.0 M 36.3 M 0.775 0.89 0.89 8.84 160 1.06 2.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/f81a2042-fea2-451c-8616-9599abf0ec5c/@@download/cross_correlation_plot/ENCFF489DPLENCFF999EFL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB668YGI michael-snyder:L-3388 "ENCFF489DPL,ENCFF999EFL" HiSeq 4000 2017-04-19T10:54:53.360055+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q7zpj0369JF3x84jBzQ38g ENCSR547LKC https://www.encodeproject.org/experiments/ENCSR547LKC transcription factor GATAD2B-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF580EBG https://www.encodeproject.org/files/ENCFF580EBG/@@download/ENCFF580EBG.bam ENCFF505PWS https://www.encodeproject.org/files/ENCFF505PWS/@@download/ENCFF505PWS.bam 114.9 M 0 109.9 M 0.957 PE 100 100 native 48.8 M 0.0 M 41.6 M 0.724 0.85 0.85 6.62 155 1.06 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/04732920-8a38-4b98-a221-34dd5ea2432a/@@download/cross_correlation_plot/ENCFF552ETPENCFF523ULM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB788LZY michael-snyder:L-3389 "ENCFF523ULM,ENCFF552ETP" HiSeq 4000 2017-04-19T10:56:35.603329+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q804Q0369Pq0zYPpqJvbPK ENCSR509GDT https://www.encodeproject.org/experiments/ENCSR509GDT transcription factor GFI1B-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF494PYL https://www.encodeproject.org/files/ENCFF494PYL/@@download/ENCFF494PYL.bam ENCFF729ZML https://www.encodeproject.org/files/ENCFF729ZML/@@download/ENCFF729ZML.bam 18.1 M 0 15.5 M 0.854 SE 36 36 native 0.0 M 12.2 M 10.1 M 0.555 0.84 0.83 5.75 120 1.45 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e6b5c74-e7d1-4c55-84d9-84126097838a/@@download/cross_correlation_plot/ENCFF002EAP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB192FMF michael-snyder:GFI-1B_sc-28356_K562_Rep1 ENCFF002EAP Illumina Genome Analyzer IIx 2016-10-29T17:59:53.889247+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B25B80jv1f0kqK0JVbgQ0X ENCSR509GDT https://www.encodeproject.org/experiments/ENCSR509GDT transcription factor GFI1B-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF829RKZ https://www.encodeproject.org/files/ENCFF829RKZ/@@download/ENCFF829RKZ.bam ENCFF091OHV https://www.encodeproject.org/files/ENCFF091OHV/@@download/ENCFF091OHV.bam 26.6 M 0 25.8 M 0.969 SE 36 36 native 0.0 M 19.5 M 18.7 M 0.704 0.97 0.97 32.99 100 1.07 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3847b78-cc19-4d59-aa85-73ae22f534b3/@@download/cross_correlation_plot/ENCFF002EAZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB992RMD michael-snyder:GFI-1B_sc-28356_K562_Rep2 ENCFF002EAZ Illumina Genome Analyzer IIx 2016-10-29T18:00:34.233859+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B25Gj0jv1xg5PX69583j3p ENCSR000EHC https://www.encodeproject.org/experiments/ENCSR000EHC "RNA binding protein,transcription factor" GTF2F1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF040MZK https://www.encodeproject.org/files/ENCFF040MZK/@@download/ENCFF040MZK.bam ENCFF376DQB https://www.encodeproject.org/files/ENCFF376DQB/@@download/ENCFF376DQB.bam 29.3 M 0 26.5 M 0.907 SE 36 36 native 0.0 M 19.4 M 18.4 M 0.628 0.95 0.95 19.10 105 1.03 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7bb591a-12f8-435c-9414-88f355e10ae3/@@download/cross_correlation_plot/ENCFF000YOM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARP ENCFF000YOM Illumina Genome Analyzer 2016-12-11T00:14:23.700594+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163X3j0369Bxb30J6x5bZ7z ENCSR000EHC https://www.encodeproject.org/experiments/ENCSR000EHC "RNA binding protein,transcription factor" GTF2F1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF215TDO https://www.encodeproject.org/files/ENCFF215TDO/@@download/ENCFF215TDO.bam ENCFF073UUX https://www.encodeproject.org/files/ENCFF073UUX/@@download/ENCFF073UUX.bam 22.2 M 0 20.3 M 0.918 SE 36 36 native 0.0 M 15.0 M 14.7 M 0.665 0.98 0.98 53.36 100 1.04 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a613a11-97fd-40f0-b785-90b7a2e9ac72/@@download/cross_correlation_plot/ENCFF000YOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADY ENCFF000YOO Illumina Genome Analyzer 2016-12-10T23:46:02.240312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163X8Q036933PVVJ7Qq01JY ENCSR387UWP https://www.encodeproject.org/experiments/ENCSR387UWP "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF677JTW https://www.encodeproject.org/files/ENCFF677JTW/@@download/ENCFF677JTW.bam ENCFF278JTC https://www.encodeproject.org/files/ENCFF278JTC/@@download/ENCFF278JTC.bam 48.3 M 0 47.6 M 0.985 PE 100 100 native 21.4 M 0.0 M 18.1 M 0.750 0.85 0.85 6.45 215 1.27 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/16ad406a-2157-4a81-98ff-50794c734e68/@@download/cross_correlation_plot/ENCFF919QDEENCFF034CSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB942RWU michael-snyder:L-11 "ENCFF034CSX,ENCFF919QDE" HiSeq 2000 2016-10-09T17:12:32.371592+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vQQ0jv1g5yGjfvVx0Kjy ENCSR387UWP https://www.encodeproject.org/experiments/ENCSR387UWP "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF921IAQ https://www.encodeproject.org/files/ENCFF921IAQ/@@download/ENCFF921IAQ.bam ENCFF035YWU https://www.encodeproject.org/files/ENCFF035YWU/@@download/ENCFF035YWU.bam 63.2 M 0 61.1 M 0.967 PE 100 100 native 26.4 M 0.0 M 22.0 M 0.695 0.83 0.83 5.87 210 1.27 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2f6543c-2c3a-4c7e-8693-9eb3464bd979/@@download/cross_correlation_plot/ENCFF517OWMENCFF871YPD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB118ODS michael-snyder:L-12 "ENCFF517OWM,ENCFF871YPD" HiSeq 2000 2016-10-09T17:13:51.110351+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vX00jv1f60PxyZ9JGKy4 ENCSR568PGX https://www.encodeproject.org/experiments/ENCSR568PGX "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF785NOU https://www.encodeproject.org/files/ENCFF785NOU/@@download/ENCFF785NOU.bam ENCFF789EWD https://www.encodeproject.org/files/ENCFF789EWD/@@download/ENCFF789EWD.bam 144.0 M 0 127.3 M 0.884 PE 100 100 native 56.3 M 0.0 M 32.2 M 0.447 0.57 0.57 2.26 205 1.06 4.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/0996f851-f953-40c2-90c9-926459a85a61/@@download/cross_correlation_plot/ENCFF895UGJENCFF910QTP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB747FPE michael-snyder:L-2915 "ENCFF895UGJ,ENCFF910QTP" HiSeq 4000 2016-10-27T22:24:11.794444+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bpG80369PQyG3V5B4504p ENCSR568PGX https://www.encodeproject.org/experiments/ENCSR568PGX "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF135YTU https://www.encodeproject.org/files/ENCFF135YTU/@@download/ENCFF135YTU.bam ENCFF550JCP https://www.encodeproject.org/files/ENCFF550JCP/@@download/ENCFF550JCP.bam 195.0 M 0 170.2 M 0.873 PE 100 100 native 74.0 M 0.0 M 55.7 M 0.571 0.75 0.75 3.87 190 1.04 3.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/28fe0b49-b39e-4219-9a5d-932c4fd512ba/@@download/cross_correlation_plot/ENCFF677ULQENCFF410PAM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB254MAR michael-snyder:L-2916 "ENCFF677ULQ,ENCFF410PAM" HiSeq 4000 2016-10-27T22:31:30.504269+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bpPQ0369GJ6xQfbB7F5zK ENCSR711VWL https://www.encodeproject.org/experiments/ENCSR711VWL "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF768MOL https://www.encodeproject.org/files/ENCFF768MOL/@@download/ENCFF768MOL.bam ENCFF675IBF https://www.encodeproject.org/files/ENCFF675IBF/@@download/ENCFF675IBF.bam 72.8 M 0 69.1 M 0.950 PE 100 100 native 29.8 M 0.0 M 29.2 M 0.803 0.98 0.98 52.41 185 1.16 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/13d02ea1-f9db-4472-9ea6-84d10e42f154/@@download/cross_correlation_plot/ENCFF672NLIENCFF095OUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB440DSO michael-snyder:L-2917 "ENCFF672NLI,ENCFF095OUI" HiSeq 2000 2017-01-28T05:05:37.474533+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k6JQ036955b55FY24VV90 ENCSR711VWL https://www.encodeproject.org/experiments/ENCSR711VWL "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF614EKP https://www.encodeproject.org/files/ENCFF614EKP/@@download/ENCFF614EKP.bam ENCFF899DGW https://www.encodeproject.org/files/ENCFF899DGW/@@download/ENCFF899DGW.bam 76.9 M 0 70.9 M 0.921 PE 100 100 native 30.4 M 0.0 M 29.2 M 0.758 0.96 0.96 24.87 185 1.12 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b46c9ec-e820-46ad-bad1-f495466e9435/@@download/cross_correlation_plot/ENCFF992PSPENCFF814BAR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB836ZKZ michael-snyder:L-2918 "ENCFF992PSP,ENCFF814BAR" HiSeq 2000 2017-01-28T05:01:12.366474+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k7BQ03691Fp8xFYBg4356 ENCSR075HTM https://www.encodeproject.org/experiments/ENCSR075HTM "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF408BKE https://www.encodeproject.org/files/ENCFF408BKE/@@download/ENCFF408BKE.bam ENCFF203LSM https://www.encodeproject.org/files/ENCFF203LSM/@@download/ENCFF203LSM.bam 51.7 M 0 50.7 M 0.981 PE 100 100 native 22.6 M 0.0 M 20.2 M 0.783 0.90 0.90 9.60 215 1.15 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd713f07-903c-4ae7-86b0-12678a78f840/@@download/cross_correlation_plot/ENCFF362ZRFENCFF896IZU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB511MDO michael-snyder:L-2107 "ENCFF896IZU,ENCFF362ZRF" HiSeq 2000 2016-10-09T17:03:50.392303+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49V00jv1g5yGjfvVx0P3j ENCSR075HTM https://www.encodeproject.org/experiments/ENCSR075HTM "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF497GOO https://www.encodeproject.org/files/ENCFF497GOO/@@download/ENCFF497GOO.bam ENCFF876AWI https://www.encodeproject.org/files/ENCFF876AWI/@@download/ENCFF876AWI.bam 54.7 M 0 52.2 M 0.955 PE 100 100 native 23.2 M 0.0 M 21.4 M 0.782 0.92 0.92 12.80 220 1.11 2.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/878994d8-0cf1-4190-aa3e-d5cc1c297cc7/@@download/cross_correlation_plot/ENCFF990UUVENCFF741IHV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB207AXV michael-snyder:L-2108 "ENCFF990UUV,ENCFF741IHV" HiSeq 2000 2016-10-09T17:03:51.467811+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49XQ0jv1QxJBfj5Zb2pqY ENCSR893WSB https://www.encodeproject.org/experiments/ENCSR893WSB "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF346DYT https://www.encodeproject.org/files/ENCFF346DYT/@@download/ENCFF346DYT.bam ENCFF249BJA https://www.encodeproject.org/files/ENCFF249BJA/@@download/ENCFF249BJA.bam 72.7 M 0 68.3 M 0.939 PE 100 100 native 29.4 M 0.0 M 28.5 M 0.784 0.97 0.97 31.29 190 1.27 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8169cc4-ddf3-46ec-96b6-7e7da3b5e315/@@download/cross_correlation_plot/ENCFF236GZMENCFF395GMN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB233EPJ michael-snyder:L-2913 "ENCFF395GMN,ENCFF236GZM" HiSeq 2000 2017-01-28T05:01:06.868406+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k7Q80369FB2f75bZ9V3b0 ENCSR893WSB https://www.encodeproject.org/experiments/ENCSR893WSB "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF731EKP https://www.encodeproject.org/files/ENCFF731EKP/@@download/ENCFF731EKP.bam ENCFF151TBQ https://www.encodeproject.org/files/ENCFF151TBQ/@@download/ENCFF151TBQ.bam 67.6 M 0 63.7 M 0.942 PE 100 100 native 27.3 M 0.0 M 26.2 M 0.776 0.96 0.96 26.73 175 1.10 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/488988ad-cd19-4998-bc35-ed4895c3b224/@@download/cross_correlation_plot/ENCFF359AZPENCFF361JMR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB006KXG michael-snyder:L-2914 "ENCFF361JMR,ENCFF359AZP" HiSeq 2000 2017-01-28T05:00:56.937197+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k94Q03690vp9f14546jx1 ENCSR024LKA https://www.encodeproject.org/experiments/ENCSR024LKA transcription factor HDAC3-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF040NCF https://www.encodeproject.org/files/ENCFF040NCF/@@download/ENCFF040NCF.bam ENCFF806JOR https://www.encodeproject.org/files/ENCFF806JOR/@@download/ENCFF806JOR.bam 150.0 M 0 142.9 M 0.953 PE 100 100 native 62.7 M 0.0 M 34.3 M 0.457 0.55 0.54 2.14 220 1.09 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd8bbebf-039a-43d8-8c6e-00faad9375bd/@@download/cross_correlation_plot/ENCFF942ZREENCFF908SKY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB907LDV michael-snyder:L-1762 "ENCFF908SKY,ENCFF942ZRE" HiSeq 4000 2016-09-16T03:22:54.650807+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGykp803691F4z83v3yfk2k ENCSR024LKA https://www.encodeproject.org/experiments/ENCSR024LKA transcription factor HDAC3-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF172XFW https://www.encodeproject.org/files/ENCFF172XFW/@@download/ENCFF172XFW.bam ENCFF795LNM https://www.encodeproject.org/files/ENCFF795LNM/@@download/ENCFF795LNM.bam 140.0 M 0 132.9 M 0.949 PE 100 100 native 57.8 M 0.0 M 45.4 M 0.649 0.79 0.78 4.46 205 1.05 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/998e6d3e-c983-4262-ba52-4f425edb0ad5/@@download/cross_correlation_plot/ENCFF770NDGENCFF369MSV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB253API michael-snyder:L-1763 "ENCFF369MSV,ENCFF770NDG" HiSeq 4000 2016-09-16T03:23:41.789327+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyky003691F4z83v3yfk34 ENCSR197ALX https://www.encodeproject.org/experiments/ENCSR197ALX "RNA binding protein,transcription factor" HDGF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF702WHX https://www.encodeproject.org/files/ENCFF702WHX/@@download/ENCFF702WHX.bam ENCFF761ABS https://www.encodeproject.org/files/ENCFF761ABS/@@download/ENCFF761ABS.bam 40.6 M 0 40.2 M 0.990 PE 100 100 native 18.0 M 0.0 M 17.8 M 0.880 0.99 0.99 160.20 245 1.08 3.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/05994415-7ed4-42bb-9955-1f9cb6283090/@@download/cross_correlation_plot/ENCFF513AFYENCFF256BLE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB004BGH michael-snyder:L-175 "ENCFF513AFY,ENCFF256BLE" HiSeq 2000 2016-10-09T17:06:32.834171+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6F980jv1f60PxyZ9JGPfq ENCSR197ALX https://www.encodeproject.org/experiments/ENCSR197ALX "RNA binding protein,transcription factor" HDGF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF795OAZ https://www.encodeproject.org/files/ENCFF795OAZ/@@download/ENCFF795OAZ.bam ENCFF847GWD https://www.encodeproject.org/files/ENCFF847GWD/@@download/ENCFF847GWD.bam 65.3 M 0 63.1 M 0.966 PE 100 100 native 26.5 M 0.0 M 26.2 M 0.802 0.99 0.99 97.44 205 1.07 3.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e010d3e-7acd-4dd4-912e-c045cb4d1e8a/@@download/cross_correlation_plot/ENCFF112IGAENCFF302OWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB562GOJ michael-snyder:L-184 "ENCFF112IGA,ENCFF302OWI" HiSeq 2000 2016-10-09T17:08:05.723777+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6FFQ0jv1xPyfX78Yz4jXf ENCSR563YDA https://www.encodeproject.org/experiments/ENCSR563YDA "RNA binding protein,transcription factor" HDGF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF769DDY https://www.encodeproject.org/files/ENCFF769DDY/@@download/ENCFF769DDY.bam ENCFF603HFB https://www.encodeproject.org/files/ENCFF603HFB/@@download/ENCFF603HFB.bam 55.0 M 0 54.2 M 0.985 PE 100 100 native 23.8 M 0.0 M 23.6 M 0.859 0.99 0.99 136.63 205 1.07 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc8913e3-78ce-417e-bea6-7ac9e87e158b/@@download/cross_correlation_plot/ENCFF598OBQENCFF324VNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB914YJE michael-snyder:L-174 "ENCFF324VNE,ENCFF598OBQ" HiSeq 2000 2016-10-09T17:30:06.091895+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66k00jv1q5825v91XY322 ENCSR563YDA https://www.encodeproject.org/experiments/ENCSR563YDA "RNA binding protein,transcription factor" HDGF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF221CPW https://www.encodeproject.org/files/ENCFF221CPW/@@download/ENCFF221CPW.bam ENCFF878BKO https://www.encodeproject.org/files/ENCFF878BKO/@@download/ENCFF878BKO.bam 69.9 M 0 67.3 M 0.963 PE 100 100 native 27.9 M 0.0 M 27.5 M 0.787 0.99 0.99 83.35 215 1.07 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/5742357d-6b15-4727-a4a6-70b85152d869/@@download/cross_correlation_plot/ENCFF664YJDENCFF214MWL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB520NBN michael-snyder:L-194 "ENCFF664YJD,ENCFF214MWL" HiSeq 2000 2016-10-09T17:30:33.110513+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66q00jv1q5825v91XY32F ENCSR090JNM https://www.encodeproject.org/experiments/ENCSR090JNM RNA binding protein HLTF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF499CUL https://www.encodeproject.org/files/ENCFF499CUL/@@download/ENCFF499CUL.bam ENCFF926TVS https://www.encodeproject.org/files/ENCFF926TVS/@@download/ENCFF926TVS.bam 77.7 M 0 70.6 M 0.909 PE 100 100 native 30.7 M 0.0 M 30.0 M 0.774 0.98 0.98 50.18 200 1.07 3.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4e1a242-b7c7-42ba-859e-ce00121fca02/@@download/cross_correlation_plot/ENCFF787PGAENCFF017GMQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB220ELT michael-snyder:L-2236 "ENCFF787PGA,ENCFF017GMQ" HiSeq 2000 2016-10-09T17:39:13.585921+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61G00jv1fGZb9Vx2f3z2Q ENCSR090JNM https://www.encodeproject.org/experiments/ENCSR090JNM RNA binding protein HLTF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF904NPY https://www.encodeproject.org/files/ENCFF904NPY/@@download/ENCFF904NPY.bam ENCFF320FWE https://www.encodeproject.org/files/ENCFF320FWE/@@download/ENCFF320FWE.bam 59.3 M 0 58.1 M 0.981 PE 100 100 native 25.6 M 0.0 M 25.1 M 0.847 0.98 0.98 53.52 200 1.07 3.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f0afad7-91ed-4eaa-89b2-34a28309ff47/@@download/cross_correlation_plot/ENCFF873BJLENCFF565HIN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB261PCM michael-snyder:L-2283 "ENCFF565HIN,ENCFF873BJL" HiSeq 2000 2016-10-09T17:35:57.624711+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61K80jv1XpBpGXQxqxYJj ENCSR632TJQ https://www.encodeproject.org/experiments/ENCSR632TJQ "RNA binding protein,transcription factor" ILF3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF863PZB https://www.encodeproject.org/files/ENCFF863PZB/@@download/ENCFF863PZB.bam ENCFF737ZPI https://www.encodeproject.org/files/ENCFF737ZPI/@@download/ENCFF737ZPI.bam 90.6 M 0 79.8 M 0.882 PE 100 100 native 35.3 M 0.0 M 32.3 M 0.714 0.91 0.91 11.67 190 1.07 3.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce497acc-08a0-44e5-aacb-bc5e86f09442/@@download/cross_correlation_plot/ENCFF182MTOENCFF949NMY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB324CWS michael-snyder:L-3285 "ENCFF182MTO,ENCFF949NMY" HiSeq 4000 2017-03-17T16:51:03.978977+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X1Gj03694V2VxJgj2qBvJ ENCSR632TJQ https://www.encodeproject.org/experiments/ENCSR632TJQ "RNA binding protein,transcription factor" ILF3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF545VWH https://www.encodeproject.org/files/ENCFF545VWH/@@download/ENCFF545VWH.bam ENCFF070LXT https://www.encodeproject.org/files/ENCFF070LXT/@@download/ENCFF070LXT.bam 95.5 M 0 86.5 M 0.906 PE 100 100 native 38.4 M 0.0 M 33.9 M 0.709 0.88 0.88 8.34 180 1.07 3.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/b8bbb42d-e3f1-4600-9e26-f4c3d49d6661/@@download/cross_correlation_plot/ENCFF645ZWBENCFF981WLR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB767DOQ michael-snyder:L-3286 "ENCFF645ZWB,ENCFF981WLR" HiSeq 4000 2017-03-17T16:50:27.826058+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X1bQ03694kjvKBZ39QjPK ENCSR000EGK https://www.encodeproject.org/experiments/ENCSR000EGK transcription factor IRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF168KTM https://www.encodeproject.org/files/ENCFF168KTM/@@download/ENCFF168KTM.bam ENCFF014UWV https://www.encodeproject.org/files/ENCFF014UWV/@@download/ENCFF014UWV.bam 25.8 M 0 25.1 M 0.974 SE 36 27 27 0.0 M 18.1 M 16.5 M 0.639 0.91 0.91 11.00 125 1.10 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/a057ab51-37af-4e19-a28c-be36e48c9789/@@download/cross_correlation_plot/ENCFF000YRQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APZ ENCFF000YRQ Illumina Genome Analyzer 2017-02-24T16:16:59.374580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbPP003692fX3p8F7PgzBZ ENCSR000EGK https://www.encodeproject.org/experiments/ENCSR000EGK transcription factor IRF1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF299HHL https://www.encodeproject.org/files/ENCFF299HHL/@@download/ENCFF299HHL.bam ENCFF642KEX https://www.encodeproject.org/files/ENCFF642KEX/@@download/ENCFF642KEX.bam 32.7 M 0 31.9 M 0.976 SE 36 27 27 0.0 M 23.1 M 20.8 M 0.637 0.90 0.90 9.86 120 1.09 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/404a5442-082e-4b8c-835a-3d2743af315a/@@download/cross_correlation_plot/ENCFF000YRS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVF ENCFF000YRS Illumina Genome Analyzer 2017-02-24T16:17:32.974503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbPZj03692ZzXjFjXX42g8 ENCSR000EGL https://www.encodeproject.org/experiments/ENCSR000EGL transcription factor IRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF259RRK https://www.encodeproject.org/files/ENCFF259RRK/@@download/ENCFF259RRK.bam ENCFF929ENI https://www.encodeproject.org/files/ENCFF929ENI/@@download/ENCFF929ENI.bam 32.5 M 0 31.4 M 0.968 SE 36 27 27 0.0 M 22.9 M 19.8 M 0.610 0.87 0.86 7.21 120 1.16 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/bba2817c-c157-488e-816d-930f59e6e177/@@download/cross_correlation_plot/ENCFF000YRH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASM ENCFF000YRH Illumina Genome Analyzer 2016-12-13T03:34:09.317034+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zqq003692pJ09J76g6090 ENCSR000EGL https://www.encodeproject.org/experiments/ENCSR000EGL transcription factor IRF1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF244IJF https://www.encodeproject.org/files/ENCFF244IJF/@@download/ENCFF244IJF.bam ENCFF509OLO https://www.encodeproject.org/files/ENCFF509OLO/@@download/ENCFF509OLO.bam 31.6 M 0 30.9 M 0.976 SE 36 27 27 0.0 M 22.1 M 20.6 M 0.651 0.93 0.93 14.79 115 1.08 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1ecea69-964f-4e5a-a7fe-267d9171195d/@@download/cross_correlation_plot/ENCFF000YRJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASN ENCFF000YRJ Illumina Genome Analyzer 2016-12-13T03:44:10.641174+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zxy003698ZxQY8q63XPYB ENCSR000EGT https://www.encodeproject.org/experiments/ENCSR000EGT transcription factor IRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF728WOA https://www.encodeproject.org/files/ENCFF728WOA/@@download/ENCFF728WOA.bam ENCFF728IDI https://www.encodeproject.org/files/ENCFF728IDI/@@download/ENCFF728IDI.bam 21.3 M 0 17.7 M 0.830 SE 36 27 27 0.0 M 11.9 M 11.3 M 0.533 0.96 0.96 24.34 120 1.33 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/a23ce311-3c1b-4b4f-a9f0-d2a49a6506dd/@@download/cross_correlation_plot/ENCFF000YSV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABO ENCFF000YSV Illumina Genome Analyzer 2016-12-13T03:23:30.263682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyQ003695yqvv8q311kG1 ENCSR000EGT https://www.encodeproject.org/experiments/ENCSR000EGT transcription factor IRF1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF489YJG https://www.encodeproject.org/files/ENCFF489YJG/@@download/ENCFF489YJG.bam ENCFF061GCD https://www.encodeproject.org/files/ENCFF061GCD/@@download/ENCFF061GCD.bam 18.0 M 0 11.6 M 0.643 SE 27 27 27 0.0 M 6.9 M 6.7 M 0.371 0.97 0.97 36.41 115 1.38 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/932f5b94-9d69-4455-b737-644761aac05b/@@download/cross_correlation_plot/ENCFF000YTB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABN ENCFF000YTB Illumina Genome Analyzer 2016-12-13T03:14:09.728112+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyBj036933PVVJ7Qq0Z7X ENCSR000EFS https://www.encodeproject.org/experiments/ENCSR000EFS transcription factor JUN-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF924CYX https://www.encodeproject.org/files/ENCFF924CYX/@@download/ENCFF924CYX.bam ENCFF156KMN https://www.encodeproject.org/files/ENCFF156KMN/@@download/ENCFF156KMN.bam 15.4 M 0 14.3 M 0.930 SE 36 36 native 0.0 M 11.1 M 9.9 M 0.644 0.90 0.90 9.49 110 1.17 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/bedc4ee3-5dec-469a-ba27-cec121ab91fb/@@download/cross_correlation_plot/ENCFF000YJJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQX ENCFF000YJJ Illumina Genome Analyzer 2016-12-11T02:16:52.047685+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163yk003690xXYVJ7Fj2f3f ENCSR000EFS https://www.encodeproject.org/experiments/ENCSR000EFS transcription factor JUN-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF014UUB https://www.encodeproject.org/files/ENCFF014UUB/@@download/ENCFF014UUB.bam ENCFF253URQ https://www.encodeproject.org/files/ENCFF253URQ/@@download/ENCFF253URQ.bam 28.4 M 0 27.8 M 0.977 SE 36 36 native 0.0 M 21.4 M 19.1 M 0.673 0.90 0.90 9.35 110 1.12 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/d57a3eb5-d725-469f-9481-4ad892a94a38/@@download/cross_correlation_plot/ENCFF000YJL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APO ENCFF000YJL Illumina Genome Analyzer 2016-12-11T02:41:23.944832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163yy0036933PVVJ7Qq01QY ENCSR000EGN https://www.encodeproject.org/experiments/ENCSR000EGN transcription factor JUND-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF400BSN https://www.encodeproject.org/files/ENCFF400BSN/@@download/ENCFF400BSN.bam ENCFF800MCM https://www.encodeproject.org/files/ENCFF800MCM/@@download/ENCFF800MCM.bam 21.3 M 0 20.5 M 0.963 SE 36 36 native 0.0 M 15.7 M 15.0 M 0.704 0.96 0.96 26.36 105 1.43 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/d83f7d69-dc53-4db4-b1c8-433db33e1f18/@@download/cross_correlation_plot/ENCFF000YSC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALZ ENCFF000YSC Illumina Genome Analyzer 2016-12-12T17:21:57.648006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1622Kj036933PVVJ7Qq012P ENCSR000EGN https://www.encodeproject.org/experiments/ENCSR000EGN transcription factor JUND-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF321ZQU https://www.encodeproject.org/files/ENCFF321ZQU/@@download/ENCFF321ZQU.bam ENCFF624HEI https://www.encodeproject.org/files/ENCFF624HEI/@@download/ENCFF624HEI.bam 34.1 M 0 33.5 M 0.983 SE 36 36 native 0.0 M 26.5 M 24.6 M 0.721 0.93 0.94 18.40 110 1.46 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/e29a2ae3-1055-4b48-90b0-5222fc49f69c/@@download/cross_correlation_plot/ENCFF000YSE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKO ENCFF000YSE Illumina Genome Analyzer 2016-12-12T17:22:31.031529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1622Y8036969X0jJ6p3ffJV ENCSR086FZL https://www.encodeproject.org/experiments/ENCSR086FZL transcription factor KAT8-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF707JIA https://www.encodeproject.org/files/ENCFF707JIA/@@download/ENCFF707JIA.bam ENCFF098EFO https://www.encodeproject.org/files/ENCFF098EFO/@@download/ENCFF098EFO.bam 50.4 M 0 49.4 M 0.980 PE 100 100 native 21.8 M 0.0 M 18.3 M 0.727 0.84 0.84 6.07 225 1.08 5.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/771f8860-96eb-4b4f-9433-af53dba55c2e/@@download/cross_correlation_plot/ENCFF505YGUENCFF093OLE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB849SFJ michael-snyder:L-2077 "ENCFF505YGU,ENCFF093OLE" HiSeq 2000 2016-10-09T17:37:22.617267+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bV00jv1vY92b0GYjVGBY ENCSR086FZL https://www.encodeproject.org/experiments/ENCSR086FZL transcription factor KAT8-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF578CKQ https://www.encodeproject.org/files/ENCFF578CKQ/@@download/ENCFF578CKQ.bam ENCFF569IGT https://www.encodeproject.org/files/ENCFF569IGT/@@download/ENCFF569IGT.bam 47.1 M 0 45.8 M 0.971 PE 100 100 native 20.2 M 0.0 M 16.3 M 0.692 0.81 0.80 4.95 220 1.09 6.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd4a8c6f-6e93-46e0-aa83-790d5f721639/@@download/cross_correlation_plot/ENCFF005NCEENCFF932SKI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB686JVZ michael-snyder:L-2078 "ENCFF932SKI,ENCFF005NCE" HiSeq 2000 2016-10-09T17:37:39.183846+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bXj0jv1QxJBfj5Zb2q6x ENCSR294AQB https://www.encodeproject.org/experiments/ENCSR294AQB transcription factor KAT8-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF092TMD https://www.encodeproject.org/files/ENCFF092TMD/@@download/ENCFF092TMD.bam ENCFF155GBI https://www.encodeproject.org/files/ENCFF155GBI/@@download/ENCFF155GBI.bam 121.9 M 0 116.7 M 0.957 PE 100 100 native 50.4 M 0.0 M 32.2 M 0.528 0.64 0.63 2.70 225 1.06 3.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/ebaedea0-b840-4e9c-96e8-454382349f82/@@download/cross_correlation_plot/ENCFF780ACXENCFF981JDC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB579AVY michael-snyder:L-2215 "ENCFF981JDC,ENCFF780ACX" HiSeq 4000 2016-09-16T03:22:02.562260+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyj0Q0369F7KPkXGKbg6VB ENCSR294AQB https://www.encodeproject.org/experiments/ENCSR294AQB transcription factor KAT8-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF989SAQ https://www.encodeproject.org/files/ENCFF989SAQ/@@download/ENCFF989SAQ.bam ENCFF657NRC https://www.encodeproject.org/files/ENCFF657NRC/@@download/ENCFF657NRC.bam 93.6 M 0 90.6 M 0.968 PE 100 100 native 39.6 M 0.0 M 17.7 M 0.378 0.45 0.47 1.96 225 1.12 3.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/99b341e7-2233-4b12-a42a-4812d10e9d6c/@@download/cross_correlation_plot/ENCFF949LIPENCFF507DBP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB990OXG michael-snyder:L-2216 "ENCFF507DBP,ENCFF949LIP" HiSeq 4000 2016-09-16T03:19:00.543588+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyj4803691F4z83v3yfk1k ENCSR360HRA https://www.encodeproject.org/experiments/ENCSR360HRA "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF342FIU https://www.encodeproject.org/files/ENCFF342FIU/@@download/ENCFF342FIU.bam ENCFF297IPL https://www.encodeproject.org/files/ENCFF297IPL/@@download/ENCFF297IPL.bam 154.0 M 0 140.0 M 0.909 PE 100 100 native 61.1 M 0.0 M 52.3 M 0.679 0.86 0.86 6.84 210 1.06 2.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/8812b9f4-5dd0-499d-b5b5-2c3b37293a03/@@download/cross_correlation_plot/ENCFF761NMEENCFF468WZY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB990HZH michael-snyder:L-2881 "ENCFF761NME,ENCFF468WZY" HiSeq 4000 2016-10-26T21:39:13.510962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07yF1003699pQzk2JB6K76y ENCSR360HRA https://www.encodeproject.org/experiments/ENCSR360HRA "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF042LKP https://www.encodeproject.org/files/ENCFF042LKP/@@download/ENCFF042LKP.bam ENCFF295PZT https://www.encodeproject.org/files/ENCFF295PZT/@@download/ENCFF295PZT.bam 92.1 M 0 81.6 M 0.886 PE 100 100 native 35.2 M 0.0 M 31.0 M 0.673 0.88 0.88 8.18 210 1.14 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/34537ff3-e44c-4a50-83ae-35062b2c6a47/@@download/cross_correlation_plot/ENCFF401OZYENCFF672AOW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB498HDN michael-snyder:L-2882 "ENCFF672AOW,ENCFF401OZY" HiSeq 4000 2016-10-26T21:33:26.841244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07yF4Q0369FFbbzvx9jvv50 ENCSR908CMW https://www.encodeproject.org/experiments/ENCSR908CMW "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF599IYT https://www.encodeproject.org/files/ENCFF599IYT/@@download/ENCFF599IYT.bam ENCFF392ICN https://www.encodeproject.org/files/ENCFF392ICN/@@download/ENCFF392ICN.bam 181.8 M 0 168.6 M 0.927 PE 100 100 native 73.5 M 0.0 M 65.8 M 0.724 0.90 0.90 9.47 205 1.11 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/e98e8d86-7a6c-4152-aca5-b4ddc8aa3035/@@download/cross_correlation_plot/ENCFF147CXNENCFF408SWF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB314IGB michael-snyder:L-2879 "ENCFF408SWF,ENCFF147CXN" HiSeq 4000 2016-09-16T03:27:01.578001+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyqP80369B1pgXbv4QG0Pv ENCSR908CMW https://www.encodeproject.org/experiments/ENCSR908CMW "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF008IZS https://www.encodeproject.org/files/ENCFF008IZS/@@download/ENCFF008IZS.bam ENCFF916XXF https://www.encodeproject.org/files/ENCFF916XXF/@@download/ENCFF916XXF.bam 102.8 M 0 91.0 M 0.885 PE 100 100 native 39.2 M 0.0 M 34.1 M 0.663 0.87 0.87 7.52 200 1.13 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/61a18ab1-9c48-4821-8987-7768dbddb494/@@download/cross_correlation_plot/ENCFF263QASENCFF763NMB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB115MXQ michael-snyder:L-2880 "ENCFF263QAS,ENCFF763NMB" HiSeq 4000 2016-09-16T03:21:24.458611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyqY80369Fb155KvKP91JF ENCSR660RNO https://www.encodeproject.org/experiments/ENCSR660RNO transcription factor KDM4B-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF994WBX https://www.encodeproject.org/files/ENCFF994WBX/@@download/ENCFF994WBX.bam ENCFF014FBX https://www.encodeproject.org/files/ENCFF014FBX/@@download/ENCFF014FBX.bam 135.3 M 0 129.1 M 0.954 PE 100 100 native 56.2 M 0.0 M 34.4 M 0.508 0.61 0.61 2.50 220 1.05 4.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/821ce7a5-45aa-4d4f-8b88-7d8d7e422bce/@@download/cross_correlation_plot/ENCFF548PMVENCFF355IQM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB949ZEQ michael-snyder:L-2217 "ENCFF548PMV,ENCFF355IQM" HiSeq 4000 2016-09-16T03:22:29.459342+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyzq003691F4z83v3yfk53 ENCSR660RNO https://www.encodeproject.org/experiments/ENCSR660RNO transcription factor KDM4B-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF850ONE https://www.encodeproject.org/files/ENCFF850ONE/@@download/ENCFF850ONE.bam ENCFF789QLW https://www.encodeproject.org/files/ENCFF789QLW/@@download/ENCFF789QLW.bam 132.1 M 0 105.9 M 0.801 PE 100 100 native 45.5 M 0.0 M 41.4 M 0.626 0.91 0.91 11.05 205 1.05 3.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f5d17ae-95a5-45d1-bc72-afc3fcfdaf1e/@@download/cross_correlation_plot/ENCFF571BGGENCFF686DFA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB574ECC michael-snyder:L-2218 "ENCFF571BGG,ENCFF686DFA" HiSeq 4000 2016-09-16T03:22:08.480511+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyzyQ0369JzPBF2JXk4PbQ ENCSR686EYO https://www.encodeproject.org/experiments/ENCSR686EYO RNA binding protein KHSRP-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF804DKO https://www.encodeproject.org/files/ENCFF804DKO/@@download/ENCFF804DKO.bam ENCFF964STB https://www.encodeproject.org/files/ENCFF964STB/@@download/ENCFF964STB.bam 72.6 M 0 71.4 M 0.984 PE 100 100 native 31.7 M 0.0 M 28.8 M 0.793 0.91 0.91 10.81 205 1.06 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff253a57-094b-48b4-981d-6fc0e5501eb6/@@download/cross_correlation_plot/ENCFF323SPJENCFF437GIK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB471TVC michael-snyder:L-311 "ENCFF323SPJ,ENCFF437GIK" HiSeq 2000 2017-03-01T18:06:29.157268+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pqqg803698f2g35f9kf0xJ ENCSR686EYO https://www.encodeproject.org/experiments/ENCSR686EYO RNA binding protein KHSRP-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF127JYR https://www.encodeproject.org/files/ENCFF127JYR/@@download/ENCFF127JYR.bam ENCFF716GDB https://www.encodeproject.org/files/ENCFF716GDB/@@download/ENCFF716GDB.bam 69.6 M 0 68.7 M 0.988 PE 100 100 native 30.6 M 0.0 M 28.5 M 0.818 0.93 0.93 14.34 200 1.06 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/247347e5-9370-4773-adf6-7c2a75b764f4/@@download/cross_correlation_plot/ENCFF270RLCENCFF044UBR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB248YTP michael-snyder:L-315 "ENCFF044UBR,ENCFF270RLC" HiSeq 2000 2017-03-01T18:06:01.327601+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pqqyQ0369069bb8ZbZv7Jy ENCSR530XQI https://www.encodeproject.org/experiments/ENCSR530XQI transcription factor L3MBTL2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF856TBD https://www.encodeproject.org/files/ENCFF856TBD/@@download/ENCFF856TBD.bam ENCFF704JZA https://www.encodeproject.org/files/ENCFF704JZA/@@download/ENCFF704JZA.bam 86.9 M 0 85.3 M 0.982 PE 100 100 native 38.6 M 0.0 M 30.3 M 0.698 0.79 0.78 4.37 205 1.19 2.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/dea9e7db-c45e-4dce-9855-57e30cc9c4c5/@@download/cross_correlation_plot/ENCFF945QMWENCFF139CLF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB030YBJ michael-snyder:L-452 "ENCFF945QMW,ENCFF139CLF" HiSeq 2000 2016-10-09T17:05:12.043437+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46g80jv1f60PxyZ9JGP68 ENCSR530XQI https://www.encodeproject.org/experiments/ENCSR530XQI transcription factor L3MBTL2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF799FNR https://www.encodeproject.org/files/ENCFF799FNR/@@download/ENCFF799FNR.bam ENCFF587FKZ https://www.encodeproject.org/files/ENCFF587FKZ/@@download/ENCFF587FKZ.bam 77.9 M 0 76.7 M 0.984 PE 100 100 native 34.8 M 0.0 M 27.3 M 0.701 0.79 0.78 4.34 235 1.48 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/38cc13f7-dda1-4c88-bd7e-9ebe980391b9/@@download/cross_correlation_plot/ENCFF756MPLENCFF347VNR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB003ART michael-snyder:L-456 "ENCFF347VNR,ENCFF756MPL" HiSeq 2000 2016-10-09T17:04:18.848502+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46jj0jv1XvFGkBjjfjQJq ENCSR066SWL https://www.encodeproject.org/experiments/ENCSR066SWL RNA binding protein LARP7-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF439TQW https://www.encodeproject.org/files/ENCFF439TQW/@@download/ENCFF439TQW.bam ENCFF088COA https://www.encodeproject.org/files/ENCFF088COA/@@download/ENCFF088COA.bam 126.8 M 0 91.9 M 0.725 PE 100 100 native 39.6 M 0.0 M 35.8 M 0.565 0.91 0.91 10.61 210 1.05 2.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/08595305-86fe-4d2d-a7a2-856bc4b850b8/@@download/cross_correlation_plot/ENCFF836ONVENCFF466VQL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB340PKB michael-snyder:L-2237 "ENCFF836ONV,ENCFF466VQL" HiSeq 4000 2017-06-16T05:20:35.683820+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KP38036955Vp79Y1qzxb5 ENCSR066SWL https://www.encodeproject.org/experiments/ENCSR066SWL RNA binding protein LARP7-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF030UQR https://www.encodeproject.org/files/ENCFF030UQR/@@download/ENCFF030UQR.bam ENCFF760YQY https://www.encodeproject.org/files/ENCFF760YQY/@@download/ENCFF760YQY.bam 76.3 M 0 74.6 M 0.978 PE 100 100 native 32.5 M 0.0 M 25.7 M 0.674 0.79 0.79 4.63 175 1.06 5.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c36396c-5887-4cf9-b749-c37e0ed8f8fc/@@download/cross_correlation_plot/ENCFF961WZWENCFF443JUG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB612IWW michael-snyder:L-3387 "ENCFF961WZW,ENCFF443JUG" HiSeq 4000 2017-06-16T03:41:43.484372+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KP6Q03698vxFF9VqvZ40b ENCSR832OGB https://www.encodeproject.org/experiments/ENCSR832OGB transcription factor LEF1-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF605ZNL https://www.encodeproject.org/files/ENCFF605ZNL/@@download/ENCFF605ZNL.bam ENCFF467IBT https://www.encodeproject.org/files/ENCFF467IBT/@@download/ENCFF467IBT.bam 61.6 M 0 60.0 M 0.974 PE 100 100 native 26.6 M 0.0 M 21.3 M 0.691 0.80 0.80 4.73 215 1.08 5.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/966c6ef3-7f86-4ce5-b361-b9a3b5b465b9/@@download/cross_correlation_plot/ENCFF850KNYENCFF037ZGC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB736UKF michael-snyder:L-313 "ENCFF850KNY,ENCFF037ZGC" HiSeq 2000 2017-02-22T05:24:26.254311+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5bJ003693jBB7J99QFPGy ENCSR832OGB https://www.encodeproject.org/experiments/ENCSR832OGB transcription factor LEF1-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF347QZM https://www.encodeproject.org/files/ENCFF347QZM/@@download/ENCFF347QZM.bam ENCFF972DIA https://www.encodeproject.org/files/ENCFF972DIA/@@download/ENCFF972DIA.bam 66.6 M 0 65.8 M 0.987 PE 100 100 native 29.1 M 0.0 M 25.9 M 0.777 0.89 0.89 8.74 210 1.07 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/04dc5d47-7d29-4f42-a33b-5f7501f04295/@@download/cross_correlation_plot/ENCFF087CSKENCFF660QON.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB862OTV michael-snyder:L-317 "ENCFF660QON,ENCFF087CSK" HiSeq 2000 2017-02-22T05:24:28.546665+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5bV00369Pxz1G3pPgxjX2 ENCSR000EGI https://www.encodeproject.org/experiments/ENCSR000EGI transcription factor MAFF-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF097GYE https://www.encodeproject.org/files/ENCFF097GYE/@@download/ENCFF097GYE.bam ENCFF017RID https://www.encodeproject.org/files/ENCFF017RID/@@download/ENCFF017RID.bam 28.6 M 0 26.9 M 0.943 SE 36 36 native 0.0 M 20.3 M 19.4 M 0.680 0.96 0.96 25.72 130 1.15 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c527a24-58f4-4e91-8e74-ae8233b8d25b/@@download/cross_correlation_plot/ENCFF000YSQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATL ENCFF000YSQ Illumina Genome Analyzer 2016-12-11T03:22:22.795289+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164V9j0369PvYp91zK1PxBv ENCSR000EGI https://www.encodeproject.org/experiments/ENCSR000EGI transcription factor MAFF-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF589IXE https://www.encodeproject.org/files/ENCFF589IXE/@@download/ENCFF589IXE.bam ENCFF269UVL https://www.encodeproject.org/files/ENCFF269UVL/@@download/ENCFF269UVL.bam 27.4 M 0 27.1 M 0.987 SE 36 36 native 0.0 M 21.1 M 20.1 M 0.734 0.96 0.96 30.18 120 1.28 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca9da9f3-bddc-47a8-ab96-827cf3854a99/@@download/cross_correlation_plot/ENCFF000YSS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJZ ENCFF000YSS Illumina Genome Analyzer 2016-12-11T03:21:55.055508+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164VKj03697yz601ypVJ3J2 ENCSR000EGX https://www.encodeproject.org/experiments/ENCSR000EGX transcription factor MAFK-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF719OIE https://www.encodeproject.org/files/ENCFF719OIE/@@download/ENCFF719OIE.bam ENCFF762UBK https://www.encodeproject.org/files/ENCFF762UBK/@@download/ENCFF762UBK.bam 50.7 M 0 42.5 M 0.837 SE 36 36 native 0.0 M 31.1 M 30.1 M 0.593 0.97 0.97 37.75 120 1.09 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/6648ec85-5508-43e8-b5c1-0a2843e6c6a9/@@download/cross_correlation_plot/ENCFF000YUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOF ENCFF000YUE Illumina Genome Analyzer 2016-10-09T17:34:28.289461+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bb00jv1zBYbxYJ5zzzgG ENCSR000EGX https://www.encodeproject.org/experiments/ENCSR000EGX transcription factor MAFK-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF852HSQ https://www.encodeproject.org/files/ENCFF852HSQ/@@download/ENCFF852HSQ.bam ENCFF914RBV https://www.encodeproject.org/files/ENCFF914RBV/@@download/ENCFF914RBV.bam 43.7 M 0 38.6 M 0.883 SE 36 36 native 0.0 M 29.5 M 27.2 M 0.623 0.93 0.94 16.67 130 1.22 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/a06838b9-2888-465e-9cfc-297b97e9e5c8/@@download/cross_correlation_plot/ENCFF000YUC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOG ENCFF000YUC Illumina Genome Analyzer 2016-10-09T17:34:23.296429+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bfQ0jv1XvFGkBjjfjQyX ENCSR000EFV https://www.encodeproject.org/experiments/ENCSR000EFV transcription factor MAX-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF360QBV https://www.encodeproject.org/files/ENCFF360QBV/@@download/ENCFF360QBV.bam ENCFF083GLO https://www.encodeproject.org/files/ENCFF083GLO/@@download/ENCFF083GLO.bam 24.5 M 0 24.1 M 0.985 SE 36 36 native 0.0 M 18.8 M 17.9 M 0.733 0.96 0.96 30.37 100 1.53 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/654dd941-dc17-4f6b-9259-f77d3e9d6b5b/@@download/cross_correlation_plot/ENCFF000YTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALL ENCFF000YTF Illumina Genome Analyzer 2016-12-11T03:01:52.476232+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1646Yj03699Z3Y8493qbq1q ENCSR000EFV https://www.encodeproject.org/experiments/ENCSR000EFV transcription factor MAX-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF635HIS https://www.encodeproject.org/files/ENCFF635HIS/@@download/ENCFF635HIS.bam ENCFF844LIK https://www.encodeproject.org/files/ENCFF844LIK/@@download/ENCFF844LIK.bam 9.9 M 0 9.8 M 0.991 SE 36 36 native 0.0 M 7.6 M 7.4 M 0.750 0.97 0.97 37.96 110 1.56 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/aeed58cc-f2b9-4057-9975-2437e1c28443/@@download/cross_correlation_plot/ENCFF000YTH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AND ENCFF000YTH Illumina Genome Analyzer 2016-12-11T02:39:37.000372+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1646jQ0369F4yf5544b19JG ENCSR000EFX https://www.encodeproject.org/experiments/ENCSR000EFX "RNA binding protein,transcription factor" MAZ-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF966GGG https://www.encodeproject.org/files/ENCFF966GGG/@@download/ENCFF966GGG.bam ENCFF164ZNV https://www.encodeproject.org/files/ENCFF164ZNV/@@download/ENCFF164ZNV.bam 30.1 M 0 29.3 M 0.973 SE 36 36 native 0.0 M 22.5 M 21.9 M 0.725 0.98 0.98 41.74 100 1.11 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/5fb3822d-9550-44c0-85a4-21a5909c2557/@@download/cross_correlation_plot/ENCFF000YTS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIB ENCFF000YTS Illumina Genome Analyzer 2016-12-11T05:05:08.461426+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166G280369KQ3Yk1yz1kj14 ENCSR000EFX https://www.encodeproject.org/experiments/ENCSR000EFX "RNA binding protein,transcription factor" MAZ-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF103RBU https://www.encodeproject.org/files/ENCFF103RBU/@@download/ENCFF103RBU.bam ENCFF419IJR https://www.encodeproject.org/files/ENCFF419IJR/@@download/ENCFF419IJR.bam 26.1 M 0 25.2 M 0.966 SE 36 36 native 0.0 M 19.8 M 19.0 M 0.730 0.96 0.97 31.20 95 1.45 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1e91fce-86fd-474d-9cc0-c2a701e51105/@@download/cross_correlation_plot/ENCFF000YTU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIC ENCFF000YTU Illumina Genome Analyzer 2016-12-11T05:01:38.080213+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166G800369BJyPz9fb9qYY4 ENCSR851BNE https://www.encodeproject.org/experiments/ENCSR851BNE transcription factor MEIS2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF796CGI https://www.encodeproject.org/files/ENCFF796CGI/@@download/ENCFF796CGI.bam ENCFF408TXM https://www.encodeproject.org/files/ENCFF408TXM/@@download/ENCFF408TXM.bam 94.8 M 0 93.8 M 0.989 PE 100 100 native 42.4 M 0.0 M 36.4 M 0.768 0.86 0.86 6.86 190 1.53 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/52c0faad-b981-4b59-bc54-6c0e258f19b3/@@download/cross_correlation_plot/ENCFF002EIUENCFF002EIV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB028OIZ michael-snyder:818_A_truseq_ATCACG "ENCFF002EIV,ENCFF002EIU" HiSeq 2000 2016-10-29T18:09:00.193401+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B27pQ0jv1Xg2Q4k5K0k64F ENCSR851BNE https://www.encodeproject.org/experiments/ENCSR851BNE transcription factor MEIS2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF031GGC https://www.encodeproject.org/files/ENCFF031GGC/@@download/ENCFF031GGC.bam ENCFF307ONI https://www.encodeproject.org/files/ENCFF307ONI/@@download/ENCFF307ONI.bam 100.7 M 0 99.4 M 0.987 PE 100 100 native 44.8 M 0.0 M 42.6 M 0.845 0.95 0.95 20.12 190 1.43 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcd7c0e9-666e-46fc-bfe7-e1c6daa42bf8/@@download/cross_correlation_plot/ENCFF002EIWENCFF002EIX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB019HCL michael-snyder:818_A_truseq_CGATGT "ENCFF002EIW,ENCFF002EIX" HiSeq 2000 2016-10-29T18:10:04.328585+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B27x80jv1x3VFb9bq4F6p8 ENCSR710WLO https://www.encodeproject.org/experiments/ENCSR710WLO transcription factor MGA-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF330XAC https://www.encodeproject.org/files/ENCFF330XAC/@@download/ENCFF330XAC.bam ENCFF796GXD https://www.encodeproject.org/files/ENCFF796GXD/@@download/ENCFF796GXD.bam 213.7 M 0 207.2 M 0.970 PE 100 100 native 90.4 M 0.0 M 74.1 M 0.693 0.82 0.82 5.45 225 1.12 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0e0b57e-0801-4fcb-a081-b22089a06a6b/@@download/cross_correlation_plot/ENCFF434ISCENCFF105BAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB315ZKU michael-snyder:L-1770 "ENCFF105BAY,ENCFF434ISC" HiSeq 4000 2016-09-16T03:29:30.675981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGykG00369G2Yz4yQjpqfJ4 ENCSR710WLO https://www.encodeproject.org/experiments/ENCSR710WLO transcription factor MGA-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF066JMV https://www.encodeproject.org/files/ENCFF066JMV/@@download/ENCFF066JMV.bam ENCFF099AAR https://www.encodeproject.org/files/ENCFF099AAR/@@download/ENCFF099AAR.bam 105.5 M 0 99.1 M 0.940 PE 100 100 native 43.3 M 0.0 M 32.0 M 0.607 0.74 0.74 3.76 245 1.21 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/1072cb46-f0e2-42f9-94e5-96c76096f134/@@download/cross_correlation_plot/ENCFF194JCSENCFF831HED.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB486UZD michael-snyder:L-1771 "ENCFF831HED,ENCFF194JCS" HiSeq 4000 2016-09-16T03:21:04.391708+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGykPj0369BP06Yb0qGVZJb ENCSR426MDV https://www.encodeproject.org/experiments/ENCSR426MDV transcription factor MIER1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF682OCC https://www.encodeproject.org/files/ENCFF682OCC/@@download/ENCFF682OCC.bam ENCFF940ZRQ https://www.encodeproject.org/files/ENCFF940ZRQ/@@download/ENCFF940ZRQ.bam 92.2 M 0 90.8 M 0.985 PE 100 100 native 40.1 M 0.0 M 36.5 M 0.791 0.91 0.91 10.71 230 1.07 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8cef925-9205-4552-9251-4ba454289c70/@@download/cross_correlation_plot/ENCFF391PZVENCFF060OGJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB410LKO michael-snyder:L-2057 "ENCFF391PZV,ENCFF060OGJ" HiSeq 2000 2016-10-09T17:38:26.611678+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv630j0jv1xFKXGVbpg0QFZ ENCSR426MDV https://www.encodeproject.org/experiments/ENCSR426MDV transcription factor MIER1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF639CLN https://www.encodeproject.org/files/ENCFF639CLN/@@download/ENCFF639CLN.bam ENCFF722EKW https://www.encodeproject.org/files/ENCFF722EKW/@@download/ENCFF722EKW.bam 44.5 M 0 43.5 M 0.978 PE 100 100 native 19.3 M 0.0 M 17.3 M 0.779 0.90 0.90 9.54 240 1.12 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a8baddd-b05c-4261-bd61-6b207c2ed59c/@@download/cross_correlation_plot/ENCFF910KPSENCFF612DVW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB381GMS michael-snyder:L-2058 "ENCFF910KPS,ENCFF612DVW" HiSeq 2000 2016-10-09T17:34:23.148249+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv632j0jv1pBzjzVx0B7f4j ENCSR107GRP https://www.encodeproject.org/experiments/ENCSR107GRP transcription factor MLLT1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF887LAD https://www.encodeproject.org/files/ENCFF887LAD/@@download/ENCFF887LAD.bam ENCFF103HMX https://www.encodeproject.org/files/ENCFF103HMX/@@download/ENCFF103HMX.bam 57.7 M 0 56.5 M 0.979 PE 100 100 native 24.6 M 0.0 M 23.6 M 0.816 0.96 0.96 22.75 180 1.17 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/38e3dba5-641a-40d1-ae49-9db2bc98f4d4/@@download/cross_correlation_plot/ENCFF994RSCENCFF755BUR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB321MJU michael-snyder:L-164 "ENCFF755BUR,ENCFF994RSC" HiSeq 2000 2016-10-09T17:38:41.346696+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YQj0jv1XYYX2Fxk3f5Z4 ENCSR107GRP https://www.encodeproject.org/experiments/ENCSR107GRP transcription factor MLLT1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF777ZPZ https://www.encodeproject.org/files/ENCFF777ZPZ/@@download/ENCFF777ZPZ.bam ENCFF819AWT https://www.encodeproject.org/files/ENCFF819AWT/@@download/ENCFF819AWT.bam 83.6 M 0 82.0 M 0.981 PE 100 100 native 35.7 M 0.0 M 34.3 M 0.821 0.96 0.96 27.83 190 1.14 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d048324-147b-4401-aacb-04a450d065ff/@@download/cross_correlation_plot/ENCFF135KOWENCFF789UDV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB240GID michael-snyder:L-181 "ENCFF789UDV,ENCFF135KOW" HiSeq 2000 2016-10-09T17:39:53.114549+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YX80jv1vY92b0GYjVG93 ENCSR675LRO https://www.encodeproject.org/experiments/ENCSR675LRO transcription factor MLLT1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF131XTL https://www.encodeproject.org/files/ENCFF131XTL/@@download/ENCFF131XTL.bam ENCFF701CLT https://www.encodeproject.org/files/ENCFF701CLT/@@download/ENCFF701CLT.bam 63.3 M 0 62.1 M 0.981 PE 100 100 native 27.1 M 0.0 M 26.1 M 0.826 0.97 0.97 29.28 190 1.08 3.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/0461eed1-196c-48b3-9afc-4b6134aeb809/@@download/cross_correlation_plot/ENCFF826AKYENCFF299YIC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB314WBY michael-snyder:L-163 "ENCFF826AKY,ENCFF299YIC" HiSeq 2000 2016-10-09T17:06:21.224586+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Kg80jv1XYYX2Fxk3f6Fp ENCSR675LRO https://www.encodeproject.org/experiments/ENCSR675LRO transcription factor MLLT1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF353XMB https://www.encodeproject.org/files/ENCFF353XMB/@@download/ENCFF353XMB.bam ENCFF084FTC https://www.encodeproject.org/files/ENCFF084FTC/@@download/ENCFF084FTC.bam 60.5 M 0 59.3 M 0.981 PE 100 100 native 26.0 M 0.0 M 25.2 M 0.834 0.97 0.97 35.31 180 1.10 3.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/d58a8a2b-a126-4c7f-a0f3-041ee2d56adc/@@download/cross_correlation_plot/ENCFF745PCHENCFF050YVZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB155HWK michael-snyder:L-180 "ENCFF050YVZ,ENCFF745PCH" HiSeq 2000 2016-10-09T17:05:38.398135+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KkQ0jv1QxJBfj5Zb2q9Y ENCSR390VGH https://www.encodeproject.org/experiments/ENCSR390VGH transcription factor MNT-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF803TYM https://www.encodeproject.org/files/ENCFF803TYM/@@download/ENCFF803TYM.bam ENCFF398EEB https://www.encodeproject.org/files/ENCFF398EEB/@@download/ENCFF398EEB.bam 86.4 M 0 82.9 M 0.960 PE 100 100 native 36.2 M 0.0 M 25.8 M 0.597 0.71 0.72 3.54 205 1.25 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/fad44d33-b512-4396-8f67-57f0253ea744/@@download/cross_correlation_plot/ENCFF514ZDJENCFF249PNP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB744RBK michael-snyder:L-2958 "ENCFF249PNP,ENCFF514ZDJ" HiSeq 4000 2016-12-07T18:39:07.002127+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13X75Q03691Pqx659jbbK0x ENCSR390VGH https://www.encodeproject.org/experiments/ENCSR390VGH transcription factor MNT-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF698VVG https://www.encodeproject.org/files/ENCFF698VVG/@@download/ENCFF698VVG.bam ENCFF960KBQ https://www.encodeproject.org/files/ENCFF960KBQ/@@download/ENCFF960KBQ.bam 99.7 M 0 96.2 M 0.965 PE 100 100 native 41.9 M 0.0 M 28.1 M 0.563 0.67 0.67 3.09 255 1.28 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e4afc05-eddf-4c3f-aeb7-a6ea0c0cb298/@@download/cross_correlation_plot/ENCFF756SROENCFF615SHE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB679AQM michael-snyder:L-2959 "ENCFF756SRO,ENCFF615SHE" HiSeq 4000 2016-12-07T18:39:43.906413+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13X7J803696Fp2759YJGkfP ENCSR512NLO https://www.encodeproject.org/experiments/ENCSR512NLO transcription factor MNT-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF911BGV https://www.encodeproject.org/files/ENCFF911BGV/@@download/ENCFF911BGV.bam ENCFF921KHT https://www.encodeproject.org/files/ENCFF921KHT/@@download/ENCFF921KHT.bam 59.9 M 0 58.8 M 0.981 PE 100 100 native 25.9 M 0.0 M 22.8 M 0.761 0.88 0.88 8.31 220 1.21 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/18d6c0a6-80b1-495f-be73-3bc74e2ff4c4/@@download/cross_correlation_plot/ENCFF642JVDENCFF196AKS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB153XIV michael-snyder:L-1676 "ENCFF642JVD,ENCFF196AKS" HiSeq 2000 2017-05-05T21:43:57.277799+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vJQ03698KGf370q9770y ENCSR512NLO https://www.encodeproject.org/experiments/ENCSR512NLO transcription factor MNT-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF767FRB https://www.encodeproject.org/files/ENCFF767FRB/@@download/ENCFF767FRB.bam ENCFF153SPR https://www.encodeproject.org/files/ENCFF153SPR/@@download/ENCFF153SPR.bam 53.9 M 0 52.9 M 0.981 PE 100 100 native 23.3 M 0.0 M 19.2 M 0.711 0.83 0.82 5.51 215 1.20 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f2ef1c9-92f1-487a-bf95-f2bd23a2924a/@@download/cross_correlation_plot/ENCFF244ECJENCFF335ZAN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB230CRX michael-snyder:L-1677 "ENCFF335ZAN,ENCFF244ECJ" HiSeq 2000 2017-05-05T21:15:07.263597+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vVQ0369JxZVj70Jj0Bvv ENCSR807BGP https://www.encodeproject.org/experiments/ENCSR807BGP transcription factor MTA1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF241GJI https://www.encodeproject.org/files/ENCFF241GJI/@@download/ENCFF241GJI.bam ENCFF852HQJ https://www.encodeproject.org/files/ENCFF852HQJ/@@download/ENCFF852HQJ.bam 52.9 M 0 51.8 M 0.978 PE 100 100 native 22.6 M 0.0 M 21.0 M 0.792 0.93 0.93 13.82 200 1.20 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/a24de28d-234f-4366-b325-e17136cadff0/@@download/cross_correlation_plot/ENCFF434PLOENCFF139SOU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB732NWZ michael-snyder:L-1697 "ENCFF139SOU,ENCFF434PLO" HiSeq 2000 2017-05-05T08:35:16.712342+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yqY003699xk39703jJkZb ENCSR807BGP https://www.encodeproject.org/experiments/ENCSR807BGP transcription factor MTA1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF647FZE https://www.encodeproject.org/files/ENCFF647FZE/@@download/ENCFF647FZE.bam ENCFF838ZKA https://www.encodeproject.org/files/ENCFF838ZKA/@@download/ENCFF838ZKA.bam 62.9 M 0 61.6 M 0.980 PE 100 100 native 26.9 M 0.0 M 25.1 M 0.799 0.93 0.93 14.74 200 1.11 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/49315ab0-381f-454c-a4c1-0cd40665b04f/@@download/cross_correlation_plot/ENCFF638OLJENCFF032QDB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB573EWI michael-snyder:L-1701 "ENCFF032QDB,ENCFF638OLJ" HiSeq 2000 2017-05-05T09:48:28.882695+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yqfQ0369JxZVj70Jj069f ENCSR113LAS https://www.encodeproject.org/experiments/ENCSR113LAS transcription factor MTA2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF254IUH https://www.encodeproject.org/files/ENCFF254IUH/@@download/ENCFF254IUH.bam ENCFF509PAP https://www.encodeproject.org/files/ENCFF509PAP/@@download/ENCFF509PAP.bam 41.2 M 0 40.0 M 0.971 PE 100 100 native 17.5 M 0.0 M 16.0 M 0.776 0.92 0.92 11.76 185 1.25 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fbcdb00a-9cc9-431e-bc87-f18107384e1f/@@download/cross_correlation_plot/ENCFF697STRENCFF766QOB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB281FLC michael-snyder:L-166 "ENCFF697STR,ENCFF766QOB" HiSeq 2000 2016-10-09T17:34:16.851188+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv629j0jv1Zx550yGy68YYv ENCSR113LAS https://www.encodeproject.org/experiments/ENCSR113LAS transcription factor MTA2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF167NVK https://www.encodeproject.org/files/ENCFF167NVK/@@download/ENCFF167NVK.bam ENCFF158BEJ https://www.encodeproject.org/files/ENCFF158BEJ/@@download/ENCFF158BEJ.bam 38.1 M 0 37.3 M 0.980 PE 100 100 native 16.5 M 0.0 M 15.6 M 0.819 0.95 0.95 19.46 185 1.29 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/67e86ed3-4c7a-476d-acef-d3c6c576231d/@@download/cross_correlation_plot/ENCFF887TWQENCFF374EZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB820SCT michael-snyder:L-183 "ENCFF374EZV,ENCFF887TWQ" HiSeq 2000 2016-10-09T17:34:38.865708+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62G00jv1k8yv12k9xk5gv ENCSR162IEM https://www.encodeproject.org/experiments/ENCSR162IEM transcription factor MYBL2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF298ZEH https://www.encodeproject.org/files/ENCFF298ZEH/@@download/ENCFF298ZEH.bam ENCFF246FRM https://www.encodeproject.org/files/ENCFF246FRM/@@download/ENCFF246FRM.bam 202.3 M 0 195.1 M 0.965 PE 100 100 native 84.3 M 0.0 M 74.9 M 0.741 0.89 0.89 9.03 195 1.04 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/6451c28b-84c4-4fdf-bd94-6a0bb3bffe5b/@@download/cross_correlation_plot/ENCFF329ODSENCFF765DMW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB966CLO michael-snyder:L-2012 "ENCFF765DMW,ENCFF329ODS" HiSeq 4000 2016-10-27T22:40:58.837576+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bZV80369PQyG3V5B4500v ENCSR162IEM https://www.encodeproject.org/experiments/ENCSR162IEM transcription factor MYBL2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF591ADX https://www.encodeproject.org/files/ENCFF591ADX/@@download/ENCFF591ADX.bam ENCFF614RJJ https://www.encodeproject.org/files/ENCFF614RJJ/@@download/ENCFF614RJJ.bam 50.1 M 0 45.7 M 0.913 PE 100 100 native 19.9 M 0.0 M 14.8 M 0.591 0.75 0.74 3.88 210 1.18 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff9cfff0-d670-4502-af16-cdb7bb03c784/@@download/cross_correlation_plot/ENCFF570QCNENCFF591FAA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB305QSD michael-snyder:L-1773 "ENCFF591FAA,ENCFF570QCN" HiSeq 4000 2016-10-27T22:28:16.353461+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bZf0036923z1QYVBPp80V ENCSR425THE https://www.encodeproject.org/experiments/ENCSR425THE transcription factor MYBL2-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR000EGJ https://www.encodeproject.org/experiments/ENCSR000EGJ transcription factor MYC-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF641HZR https://www.encodeproject.org/files/ENCFF641HZR/@@download/ENCFF641HZR.bam ENCFF191PXA https://www.encodeproject.org/files/ENCFF191PXA/@@download/ENCFF191PXA.bam 24.1 M 0 21.8 M 0.904 SE 36 36 native 0.0 M 17.0 M 15.7 M 0.651 0.92 0.92 13.45 105 1.46 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/62756ed7-05bb-4e5b-b61a-b7841952e682/@@download/cross_correlation_plot/ENCFF000YKO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOY ENCFF000YKO Illumina Genome Analyzer 2016-12-11T03:22:04.880541+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Y8j0369GF0YB1zjPf6bz ENCSR000EGJ https://www.encodeproject.org/experiments/ENCSR000EGJ transcription factor MYC-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF006GQZ https://www.encodeproject.org/files/ENCFF006GQZ/@@download/ENCFF006GQZ.bam ENCFF936GCU https://www.encodeproject.org/files/ENCFF936GCU/@@download/ENCFF936GCU.bam 28.5 M 0 26.8 M 0.940 SE 36 36 native 0.0 M 20.9 M 19.2 M 0.674 0.92 0.92 12.85 110 1.19 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/184c467b-a72f-4177-9fcd-5e1a0318252b/@@download/cross_correlation_plot/ENCFF000YKR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEQ ENCFF000YKR Illumina Genome Analyzer 2016-12-11T03:28:33.465778+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164YJj03693J2XX63yZ7F08 ENCSR000EGS https://www.encodeproject.org/experiments/ENCSR000EGS transcription factor MYC-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF239WGU https://www.encodeproject.org/files/ENCFF239WGU/@@download/ENCFF239WGU.bam ENCFF207JFR https://www.encodeproject.org/files/ENCFF207JFR/@@download/ENCFF207JFR.bam 26.8 M 0 19.8 M 0.738 SE 36 27 27 0.0 M 13.3 M 12.7 M 0.474 0.96 0.96 24.25 100 1.24 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/34c5ee94-9135-47dc-9a79-59c6f90bd9e0/@@download/cross_correlation_plot/ENCFF000YKZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOK ENCFF000YKZ Illumina Genome Analyzer 2017-02-24T16:17:24.692959+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gb84803691jF9jFjv0J0z9 ENCSR000EGS https://www.encodeproject.org/experiments/ENCSR000EGS transcription factor MYC-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF836IMK https://www.encodeproject.org/files/ENCFF836IMK/@@download/ENCFF836IMK.bam ENCFF229LOS https://www.encodeproject.org/files/ENCFF229LOS/@@download/ENCFF229LOS.bam 23.9 M 0 22.2 M 0.927 SE 36 27 27 0.0 M 16.3 M 15.1 M 0.632 0.93 0.94 18.00 110 1.87 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab74972f-1f70-4c59-912d-5db2a29e27a7/@@download/cross_correlation_plot/ENCFF000YLA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEH ENCFF000YLA Illumina Genome Analyzer 2017-02-24T16:17:49.609017+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gb8BQ03695fz0jGqG6g2G8 ENCSR085QEV https://www.encodeproject.org/experiments/ENCSR085QEV transcription factor NBN-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF397LNB https://www.encodeproject.org/files/ENCFF397LNB/@@download/ENCFF397LNB.bam ENCFF732ZCF https://www.encodeproject.org/files/ENCFF732ZCF/@@download/ENCFF732ZCF.bam 49.2 M 0 48.4 M 0.983 PE 100 100 native 21.2 M 0.0 M 19.1 M 0.778 0.90 0.90 10.22 205 1.12 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb255ec2-61ab-4dd0-948c-bf19ca206aa5/@@download/cross_correlation_plot/ENCFF854CCCENCFF881JDL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB619XMM michael-snyder:L-287 "ENCFF854CCC,ENCFF881JDL" HiSeq 2000 2016-10-09T17:06:01.674613+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4K300jv1XvFGkBjjfjQfZ ENCSR085QEV https://www.encodeproject.org/experiments/ENCSR085QEV transcription factor NBN-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF700WSI https://www.encodeproject.org/files/ENCFF700WSI/@@download/ENCFF700WSI.bam ENCFF106JJJ https://www.encodeproject.org/files/ENCFF106JJJ/@@download/ENCFF106JJJ.bam 77.8 M 0 76.2 M 0.980 PE 100 100 native 33.0 M 0.0 M 29.2 M 0.751 0.89 0.89 8.58 190 1.08 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/36e07950-338c-4924-8609-61c144676636/@@download/cross_correlation_plot/ENCFF321LCCENCFF581MDG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB817KEF michael-snyder:L-291 "ENCFF321LCC,ENCFF581MDG" HiSeq 2000 2016-10-09T17:11:34.046311+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4K4Q0jv1zBYbxYJ5zzzQ6 ENCSR658WFQ https://www.encodeproject.org/experiments/ENCSR658WFQ transcription factor NCOA1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF897GZC https://www.encodeproject.org/files/ENCFF897GZC/@@download/ENCFF897GZC.bam ENCFF905LTM https://www.encodeproject.org/files/ENCFF905LTM/@@download/ENCFF905LTM.bam 59.8 M 0 53.8 M 0.900 PE 100 100 native 23.4 M 0.0 M 19.2 M 0.641 0.82 0.82 5.49 215 1.12 2.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8c1ad63-78c3-4be8-abe9-659116bad4ac/@@download/cross_correlation_plot/ENCFF560UZFENCFF399SYU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB200LBX michael-snyder:L-1982 "ENCFF399SYU,ENCFF560UZF" HiSeq 2000 2016-10-09T17:35:24.355363+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63G80jv1YFyQ90J3z9yYg ENCSR658WFQ https://www.encodeproject.org/experiments/ENCSR658WFQ transcription factor NCOA1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF681JLI https://www.encodeproject.org/files/ENCFF681JLI/@@download/ENCFF681JLI.bam ENCFF558JEK https://www.encodeproject.org/files/ENCFF558JEK/@@download/ENCFF558JEK.bam 61.7 M 0 52.1 M 0.843 PE 100 100 native 22.7 M 0.0 M 20.0 M 0.647 0.89 0.89 8.92 215 1.15 2.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0727f37-2b05-489a-ba4f-89a066d8aa97/@@download/cross_correlation_plot/ENCFF907WUTENCFF730DID.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB023RUL michael-snyder:L-1983 "ENCFF730DID,ENCFF907WUT" HiSeq 2000 2016-10-09T17:31:50.901909+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63KQ0jv1x3KYJK9kQ04f2 ENCSR711SNW https://www.encodeproject.org/experiments/ENCSR711SNW transcription factor NCOA1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF354JLP https://www.encodeproject.org/files/ENCFF354JLP/@@download/ENCFF354JLP.bam ENCFF228HJT https://www.encodeproject.org/files/ENCFF228HJT/@@download/ENCFF228HJT.bam 43.8 M 0 41.9 M 0.957 PE 100 100 native 18.6 M 0.0 M 13.4 M 0.612 0.72 0.72 3.58 205 1.11 6.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/66e16153-52c7-4894-a31c-9be28a717181/@@download/cross_correlation_plot/ENCFF738HHZENCFF009IPS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB813IKJ michael-snyder:L-288 "ENCFF009IPS,ENCFF738HHZ" HiSeq 2000 2016-10-09T17:12:04.325680+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qJ00jv1f60PxyZ9JGKvQ ENCSR711SNW https://www.encodeproject.org/experiments/ENCSR711SNW transcription factor NCOA1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF146PDA https://www.encodeproject.org/files/ENCFF146PDA/@@download/ENCFF146PDA.bam ENCFF425PAF https://www.encodeproject.org/files/ENCFF425PAF/@@download/ENCFF425PAF.bam 56.2 M 0 54.2 M 0.964 PE 100 100 native 23.9 M 0.0 M 18.6 M 0.661 0.78 0.77 4.34 205 1.09 5.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/06482fa0-a1c6-42b5-ad72-40762fc77217/@@download/cross_correlation_plot/ENCFF042FDUENCFF343AWT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB670OJE michael-snyder:L-292 "ENCFF343AWT,ENCFF042FDU" HiSeq 2000 2016-10-09T17:13:24.938688+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qKQ0jv1XYYX2Fxk3f4g2 ENCSR803EKW https://www.encodeproject.org/experiments/ENCSR803EKW transcription factor NCOA2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF941ENT https://www.encodeproject.org/files/ENCFF941ENT/@@download/ENCFF941ENT.bam ENCFF689ZPF https://www.encodeproject.org/files/ENCFF689ZPF/@@download/ENCFF689ZPF.bam 100.5 M 0 96.9 M 0.964 PE 100 100 native 42.2 M 0.0 M 39.3 M 0.781 0.93 0.93 14.46 210 1.07 3.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/8995807b-4e13-41ce-8de6-ec9eb08c5f8f/@@download/cross_correlation_plot/ENCFF385CVMENCFF838ILR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB685IQU michael-snyder:L-2635 "ENCFF838ILR,ENCFF385CVM" HiSeq 4000 2016-09-16T03:20:44.838319+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyjg003691J6Q87Vq89p6z ENCSR803EKW https://www.encodeproject.org/experiments/ENCSR803EKW transcription factor NCOA2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF495HQQ https://www.encodeproject.org/files/ENCFF495HQQ/@@download/ENCFF495HQQ.bam ENCFF716BLV https://www.encodeproject.org/files/ENCFF716BLV/@@download/ENCFF716BLV.bam 106.6 M 0 101.3 M 0.950 PE 100 100 native 43.8 M 0.0 M 37.4 M 0.701 0.85 0.85 6.69 205 1.07 3.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/b80f7b2b-115d-4cf7-902d-489f7ce8bebf/@@download/cross_correlation_plot/ENCFF144MVRENCFF549XBX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB962PNK michael-snyder:L-2636 "ENCFF144MVR,ENCFF549XBX" HiSeq 4000 2016-09-16T03:21:59.366300+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyjpj0369Bp4j9gvg75j5Z ENCSR119ULQ https://www.encodeproject.org/experiments/ENCSR119ULQ transcription factor NCOA4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF894WFT https://www.encodeproject.org/files/ENCFF894WFT/@@download/ENCFF894WFT.bam ENCFF296ZSW https://www.encodeproject.org/files/ENCFF296ZSW/@@download/ENCFF296ZSW.bam 89.8 M 0 80.5 M 0.896 PE 100 100 native 34.9 M 0.0 M 32.6 M 0.726 0.93 0.93 15.00 190 1.06 3.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d03b697-5539-4335-a0fe-4ba0eab28946/@@download/cross_correlation_plot/ENCFF425OTYENCFF432ECI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB356ZNT michael-snyder:L-2929 "ENCFF425OTY,ENCFF432ECI" HiSeq 2000 2017-01-28T05:09:19.677927+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k2z803695Q259664kQvyQ ENCSR119ULQ https://www.encodeproject.org/experiments/ENCSR119ULQ transcription factor NCOA4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF958FJQ https://www.encodeproject.org/files/ENCFF958FJQ/@@download/ENCFF958FJQ.bam ENCFF891FDY https://www.encodeproject.org/files/ENCFF891FDY/@@download/ENCFF891FDY.bam 70.4 M 0 65.0 M 0.923 PE 100 100 native 28.6 M 0.0 M 25.3 M 0.719 0.89 0.88 8.42 185 1.07 4.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c93c656-5a26-4c9c-9ecf-766644f90461/@@download/cross_correlation_plot/ENCFF403AARENCFF783FQX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB536NKD michael-snyder:L-2930 "ENCFF783FQX,ENCFF403AAR" HiSeq 2000 2017-01-28T05:05:16.250214+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k35Q03690vp9f14546jqk ENCSR168CEE https://www.encodeproject.org/experiments/ENCSR168CEE transcription factor NCOA6-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF910GRL https://www.encodeproject.org/files/ENCFF910GRL/@@download/ENCFF910GRL.bam ENCFF036PMT https://www.encodeproject.org/files/ENCFF036PMT/@@download/ENCFF036PMT.bam 103.3 M 0 85.8 M 0.830 PE 100 100 native 37.0 M 0.0 M 32.2 M 0.623 0.87 0.87 7.63 205 1.07 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bd4faca-932c-496a-a3d7-a3c9381274c4/@@download/cross_correlation_plot/ENCFF956KKUENCFF957QWK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB969PLT michael-snyder:L-2885 "ENCFF957QWK,ENCFF956KKU" HiSeq 4000 2016-09-16T03:22:08.547479+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyV2Q036994Jx4PVBXKXq5 ENCSR168CEE https://www.encodeproject.org/experiments/ENCSR168CEE transcription factor NCOA6-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF362KOB https://www.encodeproject.org/files/ENCFF362KOB/@@download/ENCFF362KOB.bam ENCFF847DHJ https://www.encodeproject.org/files/ENCFF847DHJ/@@download/ENCFF847DHJ.bam 94.9 M 0 80.9 M 0.852 PE 100 100 native 34.9 M 0.0 M 29.1 M 0.614 0.84 0.83 5.87 220 1.07 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/de6ff0c4-d60d-437e-99cc-5ac9ad916bc0/@@download/cross_correlation_plot/ENCFF666XKIENCFF059NSA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB082ZYY michael-snyder:L-2886 "ENCFF666XKI,ENCFF059NSA" HiSeq 4000 2016-09-16T03:21:44.604741+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyV5Q0369BvpJbQkBjPZFz ENCSR298JCG https://www.encodeproject.org/experiments/ENCSR298JCG "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF488BQX https://www.encodeproject.org/files/ENCFF488BQX/@@download/ENCFF488BQX.bam ENCFF905LBF https://www.encodeproject.org/files/ENCFF905LBF/@@download/ENCFF905LBF.bam 51.2 M 0 50.1 M 0.979 PE 100 100 native 22.2 M 0.0 M 20.7 M 0.810 0.94 0.94 15.29 220 1.08 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/b172f29d-5e17-473c-901b-a8686d132f77/@@download/cross_correlation_plot/ENCFF979ZZFENCFF253UMC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB229LKR michael-snyder:L-1857 "ENCFF979ZZF,ENCFF253UMC" HiSeq 2000 2016-10-27T22:25:39.436792+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bgQj03697KPkyX9BPQF2q ENCSR298JCG https://www.encodeproject.org/experiments/ENCSR298JCG "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF247FGI https://www.encodeproject.org/files/ENCFF247FGI/@@download/ENCFF247FGI.bam ENCFF456UFJ https://www.encodeproject.org/files/ENCFF456UFJ/@@download/ENCFF456UFJ.bam 46.7 M 0 45.6 M 0.976 PE 100 100 native 20.2 M 0.0 M 18.7 M 0.801 0.93 0.93 13.54 220 1.08 3.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bf2fcee-0fe8-4c7d-a746-1ade81162fc6/@@download/cross_correlation_plot/ENCFF417KCIENCFF241ADB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB844VLU michael-snyder:L-1858 "ENCFF241ADB,ENCFF417KCI" HiSeq 2000 2016-10-27T22:25:04.625132+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bgZ00369GJ6xQfbB7F5vf ENCSR798ILC https://www.encodeproject.org/experiments/ENCSR798ILC "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF033JFM https://www.encodeproject.org/files/ENCFF033JFM/@@download/ENCFF033JFM.bam ENCFF059UBN https://www.encodeproject.org/files/ENCFF059UBN/@@download/ENCFF059UBN.bam 41.4 M 0 40.5 M 0.978 PE 100 100 native 17.9 M 0.0 M 16.4 M 0.791 0.92 0.92 12.06 210 1.40 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/600d2ec8-aa01-4409-a054-ca93b357164e/@@download/cross_correlation_plot/ENCFF455UQAENCFF714KWX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB829ZPM michael-snyder:L-1726 "ENCFF455UQA,ENCFF714KWX" HiSeq 2000 2016-09-07T16:34:15.625909+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz7bjv00369K8fzV21yYP237 ENCSR798ILC https://www.encodeproject.org/experiments/ENCSR798ILC "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF072KEJ https://www.encodeproject.org/files/ENCFF072KEJ/@@download/ENCFF072KEJ.bam ENCFF694HJF https://www.encodeproject.org/files/ENCFF694HJF/@@download/ENCFF694HJF.bam 48.2 M 0 47.3 M 0.982 PE 100 100 native 20.8 M 0.0 M 18.8 M 0.781 0.91 0.91 10.42 210 1.43 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/d79755bb-c9f5-4ff9-bf75-4261eef1d7f3/@@download/cross_correlation_plot/ENCFF268XRYENCFF642TLW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB732JMK michael-snyder:L-1727 "ENCFF268XRY,ENCFF642TLW" HiSeq 2000 2016-09-07T16:34:48.005276+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz7bjz803693JjKQB1yzv775 ENCSR051OUX https://www.encodeproject.org/experiments/ENCSR051OUX transcription factor NFATC3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF221GWS https://www.encodeproject.org/files/ENCFF221GWS/@@download/ENCFF221GWS.bam ENCFF918GZF https://www.encodeproject.org/files/ENCFF918GZF/@@download/ENCFF918GZF.bam 53.1 M 0 52.4 M 0.987 PE 100 100 native 23.1 M 0.0 M 21.3 M 0.803 0.93 0.92 13.08 230 1.14 2.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d7d9757-cbae-4cc6-ad67-2768320bbf2e/@@download/cross_correlation_plot/ENCFF163AGAENCFF352NWK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB320CKB michael-snyder:L-211 "ENCFF163AGA,ENCFF352NWK" HiSeq 2000 2016-10-09T17:03:03.046766+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Fx80jv1XYYX2Fxk3f5F9 ENCSR051OUX https://www.encodeproject.org/experiments/ENCSR051OUX transcription factor NFATC3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF059NNP https://www.encodeproject.org/files/ENCFF059NNP/@@download/ENCFF059NNP.bam ENCFF758AFU https://www.encodeproject.org/files/ENCFF758AFU/@@download/ENCFF758AFU.bam 56.1 M 0 54.9 M 0.978 PE 100 100 native 24.0 M 0.0 M 21.3 M 0.758 0.89 0.89 8.76 220 1.13 2.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/c095c0b9-6ea3-4cbf-aa98-101967ee9d2e/@@download/cross_correlation_plot/ENCFF007RQDENCFF106LFT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB833ZRT michael-snyder:L-215 "ENCFF007RQD,ENCFF106LFT" HiSeq 2000 2016-10-09T17:03:02.506997+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Fyj0jv1XYYX2Fxk3f5FX ENCSR657EOF https://www.encodeproject.org/experiments/ENCSR657EOF transcription factor NFRKB-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF437UWB https://www.encodeproject.org/files/ENCFF437UWB/@@download/ENCFF437UWB.bam ENCFF949DRZ https://www.encodeproject.org/files/ENCFF949DRZ/@@download/ENCFF949DRZ.bam 37.2 M 0 36.5 M 0.981 PE 100 100 native 15.8 M 0.0 M 15.3 M 0.822 0.97 0.97 28.54 210 1.16 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1085698-f2f2-4bf2-b5db-1f98d26aec15/@@download/cross_correlation_plot/ENCFF705WPLENCFF139VNK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB364GTX michael-snyder:L-1776 "ENCFF705WPL,ENCFF139VNK" HiSeq 2000 2016-10-09T17:34:31.735256+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61000jv1f60PxyZ9JGPbj ENCSR657EOF https://www.encodeproject.org/experiments/ENCSR657EOF transcription factor NFRKB-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF530UEA https://www.encodeproject.org/files/ENCFF530UEA/@@download/ENCFF530UEA.bam ENCFF608FVU https://www.encodeproject.org/files/ENCFF608FVU/@@download/ENCFF608FVU.bam 31.6 M 0 30.9 M 0.980 PE 100 100 native 13.6 M 0.0 M 13.2 M 0.836 0.97 0.97 33.82 210 1.16 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b48bbfe-e6fc-4517-9bbc-0170f88d5dd0/@@download/cross_correlation_plot/ENCFF340VHIENCFF710XSY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB547SPX michael-snyder:L-1777 "ENCFF710XSY,ENCFF340VHI" HiSeq 2000 2016-10-09T17:34:17.397868+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61280jv1XYYX2Fxk3f69b ENCSR000EGR https://www.encodeproject.org/experiments/ENCSR000EGR transcription factor NFYA-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF818QIJ https://www.encodeproject.org/files/ENCFF818QIJ/@@download/ENCFF818QIJ.bam ENCFF485LHB https://www.encodeproject.org/files/ENCFF485LHB/@@download/ENCFF485LHB.bam 20.6 M 0 13.0 M 0.632 SE 34 27 27 0.0 M 9.0 M 7.1 M 0.343 0.79 0.79 4.96 105 1.43 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/490eb879-8904-4fc6-a179-6610da40355c/@@download/cross_correlation_plot/ENCFF000YUV-ENCFF000YUU_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATR "ENCFF000YUV,ENCFF000YUU" Illumina Genome Analyzer 2017-07-11T21:26:34.963283+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5XXXXj03691X1jJ2b5gyg11 ENCSR000EGR https://www.encodeproject.org/experiments/ENCSR000EGR transcription factor NFYA-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF363BPK https://www.encodeproject.org/files/ENCFF363BPK/@@download/ENCFF363BPK.bam ENCFF332TEB https://www.encodeproject.org/files/ENCFF332TEB/@@download/ENCFF332TEB.bam 17.5 M 0 8.3 M 0.476 SE 34 27 27 0.0 M 4.6 M 3.8 M 0.219 0.84 0.84 6.08 90 1.32 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/9373ea2b-2ff3-4c88-86eb-5feb43e01ae8/@@download/cross_correlation_plot/ENCFF000YVR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALC ENCFF000YVR Illumina Genome Analyzer 2017-07-11T21:16:34.387162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5XXXbj0369K8BqF2fFFg18F ENCSR197VWN https://www.encodeproject.org/experiments/ENCSR197VWN RNA binding protein NKRF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF301TQN https://www.encodeproject.org/files/ENCFF301TQN/@@download/ENCFF301TQN.bam ENCFF627SNC https://www.encodeproject.org/files/ENCFF627SNC/@@download/ENCFF627SNC.bam 88.4 M 0 85.8 M 0.970 PE 100 100 native 37.3 M 0.0 M 34.1 M 0.772 0.92 0.92 11.80 185 1.08 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/8fd04163-902c-4d47-9a07-be0a55d471b5/@@download/cross_correlation_plot/ENCFF138NTBENCFF447VWZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB854SIS michael-snyder:L-2272 "ENCFF138NTB,ENCFF447VWZ" HiSeq 4000 2016-09-16T03:20:25.334481+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyjPj0369BvpJbQkBjPZQq ENCSR197VWN https://www.encodeproject.org/experiments/ENCSR197VWN RNA binding protein NKRF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF319YZO https://www.encodeproject.org/files/ENCFF319YZO/@@download/ENCFF319YZO.bam ENCFF019STM https://www.encodeproject.org/files/ENCFF019STM/@@download/ENCFF019STM.bam 106.2 M 0 102.5 M 0.965 PE 100 100 native 44.8 M 0.0 M 36.8 M 0.692 0.82 0.82 5.39 165 1.11 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/d014c3a8-858b-4fde-8e2d-082a36a68ac0/@@download/cross_correlation_plot/ENCFF715KETENCFF134LVW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB492QIJ michael-snyder:L-2273 "ENCFF715KET,ENCFF134LVW" HiSeq 4000 2016-09-16T03:21:25.355302+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyjYj0369J6bkz8ZJ7qyJq ENCSR331BDJ https://www.encodeproject.org/experiments/ENCSR331BDJ RNA binding protein NKRF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF887MQT https://www.encodeproject.org/files/ENCFF887MQT/@@download/ENCFF887MQT.bam ENCFF311QZG https://www.encodeproject.org/files/ENCFF311QZG/@@download/ENCFF311QZG.bam 52.5 M 0 50.3 M 0.958 PE 100 100 native 21.9 M 0.0 M 21.3 M 0.811 0.97 0.97 35.09 195 1.08 3.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/48c6c6c0-ad51-4d77-93c4-30359f8cab9a/@@download/cross_correlation_plot/ENCFF735DMNENCFF708VCO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB437YKX michael-snyder:L-2037 "ENCFF708VCO,ENCFF735DMN" HiSeq 2000 2016-10-09T17:37:49.927708+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5p980jv1YvGVzF100Zf5P ENCSR331BDJ https://www.encodeproject.org/experiments/ENCSR331BDJ RNA binding protein NKRF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF543IWP https://www.encodeproject.org/files/ENCFF543IWP/@@download/ENCFF543IWP.bam ENCFF425ZWU https://www.encodeproject.org/files/ENCFF425ZWU/@@download/ENCFF425ZWU.bam 72.4 M 0 69.5 M 0.960 PE 100 100 native 30.4 M 0.0 M 29.2 M 0.807 0.96 0.96 25.72 215 1.10 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ebfc58a-e4f0-4b3b-972c-62c966611e1c/@@download/cross_correlation_plot/ENCFF599KBSENCFF259JYL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB457YMV michael-snyder:L-2038 "ENCFF259JYL,ENCFF599KBS" HiSeq 2000 2016-10-09T17:41:45.106269+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5pFQ0jv1QkfFX8V1vJb93 ENCSR842CJQ https://www.encodeproject.org/experiments/ENCSR842CJQ transcription factor NR0B1-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR325DER https://www.encodeproject.org/experiments/ENCSR325DER transcription factor NR3C1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF196MMQ https://www.encodeproject.org/files/ENCFF196MMQ/@@download/ENCFF196MMQ.bam ENCFF293GOS https://www.encodeproject.org/files/ENCFF293GOS/@@download/ENCFF293GOS.bam 51.6 M 0 51.0 M 0.988 PE 100 100 native 22.9 M 0.0 M 15.3 M 0.591 0.67 0.65 2.72 220 1.11 6.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac2ca721-4412-49b7-9197-ce543308dd57/@@download/cross_correlation_plot/ENCFF628HBLENCFF114TJN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB516EPQ michael-snyder:L-289 "ENCFF114TJN,ENCFF628HBL" HiSeq 2000 2017-03-01T18:03:34.904579+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pqv7j03698f2g35f9kf0y1 ENCSR325DER https://www.encodeproject.org/experiments/ENCSR325DER transcription factor NR3C1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF228UIL https://www.encodeproject.org/files/ENCFF228UIL/@@download/ENCFF228UIL.bam ENCFF967QRJ https://www.encodeproject.org/files/ENCFF967QRJ/@@download/ENCFF967QRJ.bam 56.5 M 0 55.6 M 0.985 PE 100 100 native 24.9 M 0.0 M 20.0 M 0.708 0.80 0.80 4.74 215 1.08 5.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/ea0a8895-6dc6-42c1-b8d8-7150c83e09c8/@@download/cross_correlation_plot/ENCFF940DHIENCFF798AFN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB310FIV michael-snyder:L-293 "ENCFF798AFN,ENCFF940DHI" HiSeq 2000 2017-03-01T18:04:08.499538+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pqvV803698KKzv82Y6BYFb ENCSR494UQJ https://www.encodeproject.org/experiments/ENCSR494UQJ transcription factor NR3C1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF768DLZ https://www.encodeproject.org/files/ENCFF768DLZ/@@download/ENCFF768DLZ.bam ENCFF060FAH https://www.encodeproject.org/files/ENCFF060FAH/@@download/ENCFF060FAH.bam 50.2 M 0 46.0 M 0.917 PE 100 100 native 19.8 M 0.0 M 18.0 M 0.718 0.91 0.91 10.83 225 1.07 4.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1a45408-6434-40c2-9999-fdedbaf9f993/@@download/cross_correlation_plot/ENCFF349XHHENCFF998XOV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB515YKR michael-snyder:L-2029 "ENCFF349XHH,ENCFF998XOV" HiSeq 2000 2016-10-09T17:06:48.686085+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6F3Q0jv1vY92b0GYjVGGb ENCSR494UQJ https://www.encodeproject.org/experiments/ENCSR494UQJ transcription factor NR3C1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF887EIG https://www.encodeproject.org/files/ENCFF887EIG/@@download/ENCFF887EIG.bam ENCFF919WAX https://www.encodeproject.org/files/ENCFF919WAX/@@download/ENCFF919WAX.bam 59.5 M 0 55.0 M 0.925 PE 100 100 native 23.8 M 0.0 M 21.8 M 0.732 0.92 0.92 11.70 215 1.07 4.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/fea162ad-ac8c-400b-9a37-80186f1bd712/@@download/cross_correlation_plot/ENCFF703FVJENCFF195DWB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB008DQB michael-snyder:L-2030 "ENCFF703FVJ,ENCFF195DWB" HiSeq 2000 2016-10-09T17:07:23.688983+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6F5Q0jv1f60PxyZ9JGPfY ENCSR000EHH https://www.encodeproject.org/experiments/ENCSR000EHH transcription factor NRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF084WSP https://www.encodeproject.org/files/ENCFF084WSP/@@download/ENCFF084WSP.bam ENCFF733NCK https://www.encodeproject.org/files/ENCFF733NCK/@@download/ENCFF733NCK.bam 27.5 M 0 21.8 M 0.793 SE 36 36 native 0.0 M 16.0 M 14.4 M 0.523 0.90 0.90 9.87 105 1.12 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/d230ae01-485d-4694-b7dc-6e1e9ebe38ee/@@download/cross_correlation_plot/ENCFF000YWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUV ENCFF000YWC Illumina Genome Analyzer 2016-12-10T17:50:34.199164+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162BJ0036993F1b953B4P9f ENCSR574XEO https://www.encodeproject.org/experiments/ENCSR574XEO transcription factor NUFIP1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF379VLE https://www.encodeproject.org/files/ENCFF379VLE/@@download/ENCFF379VLE.bam ENCFF400HJN https://www.encodeproject.org/files/ENCFF400HJN/@@download/ENCFF400HJN.bam 62.5 M 0 56.2 M 0.899 PE 100 100 native 24.0 M 0.0 M 22.3 M 0.715 0.93 0.93 14.41 190 1.08 3.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/c016fd6e-39f1-427b-a29e-d649355888d0/@@download/cross_correlation_plot/ENCFF025YQVENCFF572GPA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB132LZR michael-snyder:L-2941 "ENCFF025YQV,ENCFF572GPA" HiSeq 2000 2017-02-22T05:24:31.766545+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Zqj0369459y43pYZzx6G ENCSR574XEO https://www.encodeproject.org/experiments/ENCSR574XEO transcription factor NUFIP1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF702BVO https://www.encodeproject.org/files/ENCFF702BVO/@@download/ENCFF702BVO.bam ENCFF666KMW https://www.encodeproject.org/files/ENCFF666KMW/@@download/ENCFF666KMW.bam 70.8 M 0 64.9 M 0.918 PE 100 100 native 27.8 M 0.0 M 25.6 M 0.724 0.92 0.92 13.00 190 1.07 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/500c5e62-c6ff-492c-8bdf-d537e8f89007/@@download/cross_correlation_plot/ENCFF732PVDENCFF098JPF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB428VPJ michael-snyder:L-2942 "ENCFF732PVD,ENCFF098JPF" HiSeq 2000 2017-02-22T05:25:06.392347+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Zz8036947ykV3q51f3J5 ENCSR924GXX https://www.encodeproject.org/experiments/ENCSR924GXX transcription factor PHB2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF229VMU https://www.encodeproject.org/files/ENCFF229VMU/@@download/ENCFF229VMU.bam ENCFF828ZBV https://www.encodeproject.org/files/ENCFF828ZBV/@@download/ENCFF828ZBV.bam 64.6 M 0 60.3 M 0.934 PE 100 100 native 26.0 M 0.0 M 24.4 M 0.756 0.94 0.94 15.83 205 1.07 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/05811db4-23da-4613-882c-aa7acdc577a2/@@download/cross_correlation_plot/ENCFF499ADGENCFF005PFF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB218JFX michael-snyder:L-2033 "ENCFF005PFF,ENCFF499ADG" HiSeq 2000 2016-09-07T16:36:51.689762+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz7bjY00369K8fzV21yYP22Z ENCSR924GXX https://www.encodeproject.org/experiments/ENCSR924GXX transcription factor PHB2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF802CIM https://www.encodeproject.org/files/ENCFF802CIM/@@download/ENCFF802CIM.bam ENCFF383RGH https://www.encodeproject.org/files/ENCFF383RGH/@@download/ENCFF383RGH.bam 54.5 M 0 46.2 M 0.848 PE 100 100 native 20.0 M 0.0 M 18.9 M 0.692 0.95 0.95 18.20 210 1.10 3.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/6932cc48-321e-4063-b610-b6584ae90a3f/@@download/cross_correlation_plot/ENCFF672NIZENCFF513NXC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB733EMZ michael-snyder:L-2034 "ENCFF513NXC,ENCFF672NIZ" HiSeq 2000 2016-09-07T16:35:53.078505+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz7bjg80369BfbpV39ypQbp9 ENCSR594SMP https://www.encodeproject.org/experiments/ENCSR594SMP transcription factor PHF20-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF090FVY https://www.encodeproject.org/files/ENCFF090FVY/@@download/ENCFF090FVY.bam ENCFF861VRE https://www.encodeproject.org/files/ENCFF861VRE/@@download/ENCFF861VRE.bam 69.1 M 0 64.0 M 0.927 PE 100 100 native 27.8 M 0.0 M 26.8 M 0.774 0.96 0.96 26.04 185 1.09 3.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/036ced02-0dcf-4f9e-ba62-aedb703c4f0a/@@download/cross_correlation_plot/ENCFF841SWRENCFF124AQZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB252HFL michael-snyder:L-2933 "ENCFF841SWR,ENCFF124AQZ" HiSeq 2000 2017-02-22T05:24:22.050782+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5ZY80369B35pQ3K5v4f29 ENCSR594SMP https://www.encodeproject.org/experiments/ENCSR594SMP transcription factor PHF20-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF287IHQ https://www.encodeproject.org/files/ENCFF287IHQ/@@download/ENCFF287IHQ.bam ENCFF409AIZ https://www.encodeproject.org/files/ENCFF409AIZ/@@download/ENCFF409AIZ.bam 66.0 M 0 60.8 M 0.921 PE 100 100 native 26.6 M 0.0 M 25.4 M 0.770 0.96 0.96 23.24 195 1.13 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/d45e912a-3159-4f9c-98f2-d9c713d979d7/@@download/cross_correlation_plot/ENCFF413ICFENCFF744BML.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB490ONR michael-snyder:L-2934 "ENCFF744BML,ENCFF413ICF" HiSeq 2000 2017-02-22T05:24:40.469511+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Zg803699xZQ11gXX3YX0 ENCSR119VCX https://www.encodeproject.org/experiments/ENCSR119VCX transcription factor PHF21A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF357AUM https://www.encodeproject.org/files/ENCFF357AUM/@@download/ENCFF357AUM.bam ENCFF815FDI https://www.encodeproject.org/files/ENCFF815FDI/@@download/ENCFF815FDI.bam 72.7 M 0 71.2 M 0.979 PE 100 100 native 30.9 M 0.0 M 28.8 M 0.792 0.93 0.93 14.34 180 1.08 2.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/a89c8d9e-65a0-4224-ac39-2128355b41a5/@@download/cross_correlation_plot/ENCFF282GILENCFF356VYM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB431QCU michael-snyder:L-2951 "ENCFF282GIL,ENCFF356VYM" HiSeq 2000 2017-02-22T05:25:39.418858+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5ZFQ03694kPfQKJ90GY5X ENCSR119VCX https://www.encodeproject.org/experiments/ENCSR119VCX transcription factor PHF21A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF118SOA https://www.encodeproject.org/files/ENCFF118SOA/@@download/ENCFF118SOA.bam ENCFF828EAF https://www.encodeproject.org/files/ENCFF828EAF/@@download/ENCFF828EAF.bam 50.0 M 0 48.7 M 0.974 PE 100 100 native 20.9 M 0.0 M 19.4 M 0.778 0.93 0.93 14.19 190 1.09 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/36fae66d-4fca-469d-9e2d-ac4af08bc05c/@@download/cross_correlation_plot/ENCFF025MOIENCFF608JOK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB298JJW michael-snyder:L-2952 "ENCFF025MOI,ENCFF608JOK" HiSeq 2000 2017-02-22T05:23:01.895200+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5ZKQ03694kPfQKJ90GY5p ENCSR115SMW https://www.encodeproject.org/experiments/ENCSR115SMW transcription factor PKNOX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF636IGK https://www.encodeproject.org/files/ENCFF636IGK/@@download/ENCFF636IGK.bam ENCFF672RSD https://www.encodeproject.org/files/ENCFF672RSD/@@download/ENCFF672RSD.bam 72.8 M 0 71.5 M 0.983 PE 100 100 native 31.7 M 0.0 M 29.0 M 0.797 0.91 0.91 11.61 205 1.88 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/20722e04-1769-46d6-8c61-1a1bbcdc4b95/@@download/cross_correlation_plot/ENCFF755HHMENCFF292YNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB968GQF michael-snyder:L-290 "ENCFF755HHM,ENCFF292YNE" HiSeq 2000 2016-10-09T17:07:04.738734+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6J780jv1f6Kg8jbGjKZP3 ENCSR115SMW https://www.encodeproject.org/experiments/ENCSR115SMW transcription factor PKNOX1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF494OJC https://www.encodeproject.org/files/ENCFF494OJC/@@download/ENCFF494OJC.bam ENCFF653BMD https://www.encodeproject.org/files/ENCFF653BMD/@@download/ENCFF653BMD.bam 65.4 M 0 64.3 M 0.984 PE 100 100 native 28.7 M 0.0 M 26.6 M 0.812 0.93 0.93 13.96 225 2.27 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c8a4e20-d652-40e4-8eb7-67f9d2d3762c/@@download/cross_correlation_plot/ENCFF921VOKENCFF871SUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB342XMG michael-snyder:L-294 "ENCFF871SUI,ENCFF921VOK" HiSeq 2000 2016-10-09T17:06:08.929191+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6J9Q0jv1x3KYJK9kQ04jj ENCSR364SNE https://www.encodeproject.org/experiments/ENCSR364SNE "RNA binding protein,transcription factor" POU5F1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF178ZLZ https://www.encodeproject.org/files/ENCFF178ZLZ/@@download/ENCFF178ZLZ.bam ENCFF412BMV https://www.encodeproject.org/files/ENCFF412BMV/@@download/ENCFF412BMV.bam 26.8 M 0 25.4 M 0.946 SE 36 36 native 0.0 M 19.2 M 18.1 M 0.673 0.94 0.94 17.63 120 1.04 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/1aeba77f-e883-4369-a613-5e93144cc273/@@download/cross_correlation_plot/ENCFF002EEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB950WMS michael-snyder:Oct4_2750_K562_Rep1 ENCFF002EEQ Illumina Genome Analyzer IIx 2016-10-29T18:01:14.103262+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B23580jv1zQyG3V5B45f13 ENCSR364SNE https://www.encodeproject.org/experiments/ENCSR364SNE "RNA binding protein,transcription factor" POU5F1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF645RWA https://www.encodeproject.org/files/ENCFF645RWA/@@download/ENCFF645RWA.bam ENCFF613SVQ https://www.encodeproject.org/files/ENCFF613SVQ/@@download/ENCFF613SVQ.bam 21.2 M 0 19.9 M 0.936 SE 36 36 native 0.0 M 15.0 M 13.0 M 0.612 0.87 0.87 7.47 120 1.05 2.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/409e0199-338b-4b26-8889-04689f0f411f/@@download/cross_correlation_plot/ENCFF002EEN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB521VLD michael-snyder:Oct4_2750_K562_Rep2 ENCFF002EEN Illumina Genome Analyzer IIx 2016-10-29T18:00:28.842634+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B237j0jv1zQyG3V5B45f1F ENCSR120MPG https://www.encodeproject.org/experiments/ENCSR120MPG transcription factor PRDM10-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF983MYK https://www.encodeproject.org/files/ENCFF983MYK/@@download/ENCFF983MYK.bam ENCFF452WBT https://www.encodeproject.org/files/ENCFF452WBT/@@download/ENCFF452WBT.bam 76.9 M 0 70.2 M 0.913 PE 100 100 native 30.0 M 0.0 M 27.2 M 0.709 0.92 0.93 14.85 210 1.54 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/78c5c2ff-7dc8-402c-b12c-216775b8a43b/@@download/cross_correlation_plot/ENCFF275AJEENCFF939BBH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB481MNK michael-snyder:L-2943 "ENCFF939BBH,ENCFF275AJE" HiSeq 2000 2017-02-22T05:26:24.638734+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5QZQ03699BJ8f3PbkYB0b ENCSR120MPG https://www.encodeproject.org/experiments/ENCSR120MPG transcription factor PRDM10-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF509AXN https://www.encodeproject.org/files/ENCFF509AXN/@@download/ENCFF509AXN.bam ENCFF384LZB https://www.encodeproject.org/files/ENCFF384LZB/@@download/ENCFF384LZB.bam 72.3 M 0 64.1 M 0.887 PE 100 100 native 27.4 M 0.0 M 25.0 M 0.692 0.91 0.92 12.86 215 1.59 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2ddd1bb-c434-4679-a47d-4c2b534708fa/@@download/cross_correlation_plot/ENCFF758VSSENCFF234PZS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB459FUL michael-snyder:L-2944 "ENCFF758VSS,ENCFF234PZS" HiSeq 2000 2017-02-22T05:25:26.988606+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5V48036979pgj3P6Zfkzp ENCSR431XGJ https://www.encodeproject.org/experiments/ENCSR431XGJ transcription factor PYGO2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF293PYL https://www.encodeproject.org/files/ENCFF293PYL/@@download/ENCFF293PYL.bam ENCFF830UYZ https://www.encodeproject.org/files/ENCFF830UYZ/@@download/ENCFF830UYZ.bam 61.3 M 0 60.2 M 0.982 PE 100 100 native 26.1 M 0.0 M 24.6 M 0.804 0.95 0.94 18.01 205 1.07 3.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f91b64e-27a6-492c-847e-9b5b94a177c1/@@download/cross_correlation_plot/ENCFF492UOJENCFF165JGK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB545MFG michael-snyder:L-203 "ENCFF165JGK,ENCFF492UOJ" HiSeq 2000 2016-10-09T17:05:34.534398+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6QgQ0jv1g5yGjfvVx0PX9 ENCSR431XGJ https://www.encodeproject.org/experiments/ENCSR431XGJ transcription factor PYGO2-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF198WIX https://www.encodeproject.org/files/ENCFF198WIX/@@download/ENCFF198WIX.bam ENCFF135PKG https://www.encodeproject.org/files/ENCFF135PKG/@@download/ENCFF135PKG.bam 42.6 M 0 41.9 M 0.984 PE 100 100 native 18.6 M 0.0 M 17.1 M 0.805 0.93 0.93 13.41 210 1.11 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e296c77-478e-4920-ac94-3659c766a9e7/@@download/cross_correlation_plot/ENCFF113QZVENCFF891LJI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB210KUL michael-snyder:L-319 "ENCFF113QZV,ENCFF891LJI" HiSeq 2000 2016-10-09T17:03:19.772710+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Qkj0jv1f60PxyZ9JGPj4 ENCSR670JDQ https://www.encodeproject.org/experiments/ENCSR670JDQ transcription factor RB1-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF706XFF https://www.encodeproject.org/files/ENCFF706XFF/@@download/ENCFF706XFF.bam ENCFF621VLS https://www.encodeproject.org/files/ENCFF621VLS/@@download/ENCFF621VLS.bam 76.7 M 0 51.0 M 0.666 PE 100 100 native 22.5 M 0.0 M 19.5 M 0.508 0.87 0.87 7.36 150 1.13 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a38f588-1f0d-4b1b-b8c1-9c04bf88645b/@@download/cross_correlation_plot/ENCFF615SOFENCFF656UEH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB457CJU michael-snyder:L-3129 "ENCFF615SOF,ENCFF656UEH" HiSeq 2000 2017-03-04T18:11:49.940032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv2b00369Jvq8g82Pv828Y ENCSR670JDQ https://www.encodeproject.org/experiments/ENCSR670JDQ transcription factor RB1-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF459MNI https://www.encodeproject.org/files/ENCFF459MNI/@@download/ENCFF459MNI.bam ENCFF023AOR https://www.encodeproject.org/files/ENCFF023AOR/@@download/ENCFF023AOR.bam 64.0 M 0 49.0 M 0.766 PE 100 100 native 21.8 M 0.0 M 20.7 M 0.648 0.95 0.95 19.81 155 1.17 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e587359-260c-4a71-8772-5f37de4d1d4e/@@download/cross_correlation_plot/ENCFF935GDUENCFF268JOY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB661JJB michael-snyder:L-3130 "ENCFF935GDU,ENCFF268JOY" HiSeq 2000 2017-03-04T18:11:03.911304+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv2qQ0369PGfpQ3jZKZG47 ENCSR000EGC https://www.encodeproject.org/experiments/ENCSR000EGC transcription factor RCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF623TAD https://www.encodeproject.org/files/ENCFF623TAD/@@download/ENCFF623TAD.bam ENCFF796EJK https://www.encodeproject.org/files/ENCFF796EJK/@@download/ENCFF796EJK.bam 24.9 M 0 23.3 M 0.933 SE 36 36 native 0.0 M 17.2 M 16.7 M 0.671 0.98 0.98 42.51 95 1.08 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/88178e9d-ed05-40bf-b9b1-c0b0a75d6857/@@download/cross_correlation_plot/ENCFF000YLF-ENCFF000YLC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALM "ENCFF000YLF,ENCFF000YLC" Illumina Genome Analyzer 2016-12-11T05:03:51.297213+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164qy00369PJ8BP63qf1Fgq ENCSR000EGC https://www.encodeproject.org/experiments/ENCSR000EGC transcription factor RCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF112DFJ https://www.encodeproject.org/files/ENCFF112DFJ/@@download/ENCFF112DFJ.bam ENCFF694BOP https://www.encodeproject.org/files/ENCFF694BOP/@@download/ENCFF694BOP.bam 31.7 M 0 31.3 M 0.989 SE 36 36 native 0.0 M 23.9 M 23.1 M 0.729 0.97 0.97 30.94 110 1.03 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/bebec6c7-f68c-45d9-98c5-9ee62a557cea/@@download/cross_correlation_plot/ENCFF000YLH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGF ENCFF000YLH Illumina Genome Analyzer 2016-12-11T04:01:08.274368+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164v300369KQ3Yk1yz1kgYQ ENCSR000EGG https://www.encodeproject.org/experiments/ENCSR000EGG transcription factor RCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF444OMB https://www.encodeproject.org/files/ENCFF444OMB/@@download/ENCFF444OMB.bam ENCFF167HUG https://www.encodeproject.org/files/ENCFF167HUG/@@download/ENCFF167HUG.bam 25.1 M 0 24.3 M 0.968 SE 36 36 native 0.0 M 18.7 M 18.1 M 0.720 0.97 0.97 37.52 105 1.38 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/674e38a2-7f2e-437f-a1b2-1529a96f7cf0/@@download/cross_correlation_plot/ENCFF000YLO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKJ ENCFF000YLO Illumina Genome Analyzer 2016-12-11T05:00:21.404125+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166J6Q0369BgG8x1ygv1Xj2 ENCSR000EGG https://www.encodeproject.org/experiments/ENCSR000EGG transcription factor RCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF523QGZ https://www.encodeproject.org/files/ENCFF523QGZ/@@download/ENCFF523QGZ.bam ENCFF755IVD https://www.encodeproject.org/files/ENCFF755IVD/@@download/ENCFF755IVD.bam 21.9 M 0 20.7 M 0.948 SE 36 36 native 0.0 M 15.7 M 15.2 M 0.696 0.97 0.97 38.53 100 1.28 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/b318ea0a-d069-452d-b682-f41978a7600d/@@download/cross_correlation_plot/ENCFF000YLQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKL ENCFF000YLQ Illumina Genome Analyzer 2016-12-11T05:00:51.988544+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166JG803695Kj1j8qPQgkk9 ENCSR137ZMQ https://www.encodeproject.org/experiments/ENCSR137ZMQ "transcription factor,chromatin remodeller" REST-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF253JTJ https://www.encodeproject.org/files/ENCFF253JTJ/@@download/ENCFF253JTJ.bam ENCFF481VHS https://www.encodeproject.org/files/ENCFF481VHS/@@download/ENCFF481VHS.bam 95.3 M 0 94.1 M 0.988 PE 100 100 native 42.7 M 0.0 M 34.2 M 0.717 0.80 0.80 4.79 205 1.66 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/d751fd11-dbe7-4131-be60-1a7fad13dcbe/@@download/cross_correlation_plot/ENCFF002EJCENCFF002EIZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB693QTZ michael-snyder:818_B_truseq_ATCACG "ENCFF002EJC,ENCFF002EIZ" HiSeq 2000 2016-10-29T18:09:18.561729+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B298Q0jv1xYX7855VG0JBb ENCSR137ZMQ https://www.encodeproject.org/experiments/ENCSR137ZMQ "transcription factor,chromatin remodeller" REST-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF268CBK https://www.encodeproject.org/files/ENCFF268CBK/@@download/ENCFF268CBK.bam ENCFF369DNX https://www.encodeproject.org/files/ENCFF369DNX/@@download/ENCFF369DNX.bam 100.7 M 0 99.3 M 0.987 PE 100 100 native 44.7 M 0.0 M 41.8 M 0.830 0.93 0.94 15.53 195 1.30 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/530f33a2-acd1-4ae6-ba4d-29a2a6a96e36/@@download/cross_correlation_plot/ENCFF002EJEENCFF002EJH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB077NGB michael-snyder:818_B_truseq_CGATGT "ENCFF002EJH,ENCFF002EJE" HiSeq 2000 2016-10-29T18:09:46.076272+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29G00jv1X3z1QYVBPppZ4 ENCSR000EGO https://www.encodeproject.org/experiments/ENCSR000EGO transcription factor RFX5-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF230AXK https://www.encodeproject.org/files/ENCFF230AXK/@@download/ENCFF230AXK.bam ENCFF050AHY https://www.encodeproject.org/files/ENCFF050AHY/@@download/ENCFF050AHY.bam 25.9 M 0 24.9 M 0.959 SE 36 36 native 0.0 M 19.1 M 15.5 M 0.599 0.82 0.82 5.36 115 1.08 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/97fb1c2c-e6fe-464d-9f76-34c46c51f8b7/@@download/cross_correlation_plot/ENCFF000YYD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACY ENCFF000YYD Illumina Genome Analyzer 2016-12-11T04:01:28.123184+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1650P003697yz601ypVJ3Vp ENCSR000EGO https://www.encodeproject.org/experiments/ENCSR000EGO transcription factor RFX5-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF524SJJ https://www.encodeproject.org/files/ENCFF524SJJ/@@download/ENCFF524SJJ.bam ENCFF841IIA https://www.encodeproject.org/files/ENCFF841IIA/@@download/ENCFF841IIA.bam 32.6 M 0 29.7 M 0.913 SE 36 36 native 0.0 M 22.9 M 20.4 M 0.627 0.89 0.90 10.14 110 1.06 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/da1ba9a1-cef9-4765-a566-f5a2ea2efe56/@@download/cross_correlation_plot/ENCFF000YYI-ENCFF000YYF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKF "ENCFF000YYF,ENCFF000YYI" Illumina Genome Analyzer 2016-12-11T08:41:24.042033+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1650Yj03697yz601ypVJ3X4 ENCSR718SDE https://www.encodeproject.org/experiments/ENCSR718SDE transcription factor RLF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF317PBJ https://www.encodeproject.org/files/ENCFF317PBJ/@@download/ENCFF317PBJ.bam ENCFF025AZR https://www.encodeproject.org/files/ENCFF025AZR/@@download/ENCFF025AZR.bam 61.4 M 0 60.5 M 0.985 PE 100 100 native 26.6 M 0.0 M 25.0 M 0.815 0.94 0.94 16.89 210 1.07 3.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/00bae4c2-954e-4e0b-aec0-3d09a6f845a3/@@download/cross_correlation_plot/ENCFF640JQIENCFF765ZNI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB278GNJ michael-snyder:L-233 "ENCFF765ZNI,ENCFF640JQI" HiSeq 2000 2017-03-17T16:51:02.278316+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X1y80369GG4vP2xGv00P8 ENCSR718SDE https://www.encodeproject.org/experiments/ENCSR718SDE transcription factor RLF-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF852XUO https://www.encodeproject.org/files/ENCFF852XUO/@@download/ENCFF852XUO.bam ENCFF026NYG https://www.encodeproject.org/files/ENCFF026NYG/@@download/ENCFF026NYG.bam 48.2 M 0 47.0 M 0.973 PE 100 100 native 20.7 M 0.0 M 19.7 M 0.815 0.95 0.95 20.00 235 1.08 4.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0e1b20f-f0f8-4979-8be9-90b617b03bcb/@@download/cross_correlation_plot/ENCFF812LUVENCFF324OEM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB430LRT michael-snyder:L-1881 "ENCFF324OEM,ENCFF812LUV" HiSeq 2000 2017-03-17T16:49:40.322049+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X27j036935X062JF169Vp ENCSR414TYY https://www.encodeproject.org/experiments/ENCSR414TYY transcription factor RUNX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF548STV https://www.encodeproject.org/files/ENCFF548STV/@@download/ENCFF548STV.bam ENCFF289BJO https://www.encodeproject.org/files/ENCFF289BJO/@@download/ENCFF289BJO.bam 65.1 M 0 63.8 M 0.979 PE 100 100 native 28.8 M 0.0 M 20.0 M 0.613 0.69 0.68 2.95 185 1.12 10.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/c299d734-dfa8-4bb2-bfa0-7b9575472b90/@@download/cross_correlation_plot/ENCFF002DOZENCFF002EGE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB991KIJ michael-snyder:672_B_TruSeq_ATCACG "ENCFF002DOZ,ENCFF002EGE" HiSeq 2000 2016-10-09T17:05:25.543652+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Q180jv1XvFGkBjjfjQgp ENCSR414TYY https://www.encodeproject.org/experiments/ENCSR414TYY transcription factor RUNX1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF350NUJ https://www.encodeproject.org/files/ENCFF350NUJ/@@download/ENCFF350NUJ.bam ENCFF659VBT https://www.encodeproject.org/files/ENCFF659VBT/@@download/ENCFF659VBT.bam 70.7 M 0 69.3 M 0.981 PE 100 100 native 31.3 M 0.0 M 27.4 M 0.775 0.87 0.87 7.77 175 1.09 7.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1424c63-a0e0-4448-b1c5-992e5b092f61/@@download/cross_correlation_plot/ENCFF002EGDENCFF002DPH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB240LOR michael-snyder:672_B_TruSeq_CGATGT "ENCFF002EGD,ENCFF002DPH" HiSeq 2000 2016-10-09T17:06:31.760266+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Q300jv1QxJBfj5Zb2q2Y ENCSR920BLG https://www.encodeproject.org/experiments/ENCSR920BLG transcription factor SIN3A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF315DZX https://www.encodeproject.org/files/ENCFF315DZX/@@download/ENCFF315DZX.bam ENCFF706HJC https://www.encodeproject.org/files/ENCFF706HJC/@@download/ENCFF706HJC.bam 27.2 M 0 25.9 M 0.952 SE 36 36 native 0.0 M 19.4 M 19.0 M 0.696 0.98 0.98 41.62 115 1.07 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/51441994-269b-4316-b79d-33a509d6fad1/@@download/cross_correlation_plot/ENCFF002EWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB932WDR michael-snyder:SIN3A_NB600-1263_K562_Rep1 ENCFF002EWE Illumina Genome Analyzer IIx 2016-10-09T17:01:33.797722+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KFQ0jv1QxJBfj5Zb2q98 ENCSR920BLG https://www.encodeproject.org/experiments/ENCSR920BLG transcription factor SIN3A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF385PRZ https://www.encodeproject.org/files/ENCFF385PRZ/@@download/ENCFF385PRZ.bam ENCFF900RPG https://www.encodeproject.org/files/ENCFF900RPG/@@download/ENCFF900RPG.bam 25.5 M 0 25.0 M 0.978 SE 36 36 native 0.0 M 19.0 M 10.7 M 0.420 0.57 0.52 1.82 105 1.07 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/b31ca8e8-d574-4e27-bb11-bec8d05874dd/@@download/cross_correlation_plot/ENCFF002EWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB698ZHC michael-snyder:SIN3A_NB600-1263_K562_Rep2 ENCFF002EWJ Illumina Genome Analyzer IIx 2016-10-09T17:01:26.335819+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KJ80jv1zBYbxYJ5zzzvB ENCSR336DXE https://www.encodeproject.org/experiments/ENCSR336DXE transcription factor SKIL-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF141XAC https://www.encodeproject.org/files/ENCFF141XAC/@@download/ENCFF141XAC.bam ENCFF606QOR https://www.encodeproject.org/files/ENCFF606QOR/@@download/ENCFF606QOR.bam 85.3 M 0 81.8 M 0.960 PE 100 100 native 36.6 M 0.0 M 32.5 M 0.761 0.89 0.89 8.78 250 1.08 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/4080d0c2-6811-453d-a2e1-c2c283c04058/@@download/cross_correlation_plot/ENCFF493LNWENCFF310DAJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB491EZI michael-snyder:L-473 "ENCFF493LNW,ENCFF310DAJ" HiSeq 2000 2016-10-09T17:16:03.452427+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40y80jv1xPyfX78Yz4gj0 ENCSR336DXE https://www.encodeproject.org/experiments/ENCSR336DXE transcription factor SKIL-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF995IZW https://www.encodeproject.org/files/ENCFF995IZW/@@download/ENCFF995IZW.bam ENCFF824GQY https://www.encodeproject.org/files/ENCFF824GQY/@@download/ENCFF824GQY.bam 72.0 M 0 70.6 M 0.981 PE 100 100 native 31.2 M 0.0 M 28.2 M 0.783 0.90 0.90 10.20 185 1.09 3.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/853df21d-73d7-4560-aaa1-983abbd32189/@@download/cross_correlation_plot/ENCFF411JNOENCFF138KRI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB295RTL michael-snyder:L-148 "ENCFF138KRI,ENCFF411JNO" HiSeq 2000 2016-10-09T17:13:42.843108+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40zj0jv1XvFGkBjjfjQ6b ENCSR038DJJ https://www.encodeproject.org/experiments/ENCSR038DJJ transcription factor SMAD1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF720GSG https://www.encodeproject.org/files/ENCFF720GSG/@@download/ENCFF720GSG.bam ENCFF120SAO https://www.encodeproject.org/files/ENCFF120SAO/@@download/ENCFF120SAO.bam 29.4 M 0 28.3 M 0.963 SE 36 36 native 0.0 M 21.3 M 20.0 M 0.681 0.94 0.94 17.43 120 1.05 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5502155-2b7c-4f41-b94a-01ebf1dc6e7a/@@download/cross_correlation_plot/ENCFF002EBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB711TFY michael-snyder:SMAD1_600-401-B29_K562_Rep1 ENCFF002EBF Illumina Genome Analyzer IIx 2016-10-29T18:00:27.622786+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B26Bj0jv1jB80B4kPK217y ENCSR038DJJ https://www.encodeproject.org/experiments/ENCSR038DJJ transcription factor SMAD1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF098FBI https://www.encodeproject.org/files/ENCFF098FBI/@@download/ENCFF098FBI.bam ENCFF750NWO https://www.encodeproject.org/files/ENCFF750NWO/@@download/ENCFF750NWO.bam 27.2 M 0 26.4 M 0.970 SE 36 36 native 0.0 M 20.2 M 18.2 M 0.667 0.91 0.91 10.51 120 1.06 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/1790a8aa-3981-4790-8583-640d225f3442/@@download/cross_correlation_plot/ENCFF002EBM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB114XYD michael-snyder:SMAD1_600-401-B29_Rb_K562_Rep2 ENCFF002EBM Illumina Genome Analyzer IIx 2016-10-29T18:00:20.119405+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B26J80jv1pj2bF0JP9K2bx ENCSR189PYJ https://www.encodeproject.org/experiments/ENCSR189PYJ transcription factor SMAD2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF257QQX https://www.encodeproject.org/files/ENCFF257QQX/@@download/ENCFF257QQX.bam ENCFF939IYF https://www.encodeproject.org/files/ENCFF939IYF/@@download/ENCFF939IYF.bam 24.8 M 0 22.6 M 0.910 SE 36 36 native 0.0 M 17.0 M 15.8 M 0.638 0.94 0.94 15.66 125 1.03 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/f34402ef-66af-4556-ba25-12a792ab0e80/@@download/cross_correlation_plot/ENCFF002EBP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB583AAU michael-snyder:SMAD2_600-401-A59_K562_Rep1 ENCFF002EBP Illumina Genome Analyzer IIx 2016-10-09T17:09:37.403163+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3q980jv1xPyfX78Yz4gXZ ENCSR189PYJ https://www.encodeproject.org/experiments/ENCSR189PYJ transcription factor SMAD2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF925CYF https://www.encodeproject.org/files/ENCFF925CYF/@@download/ENCFF925CYF.bam ENCFF610XND https://www.encodeproject.org/files/ENCFF610XND/@@download/ENCFF610XND.bam 30.5 M 0 29.8 M 0.977 SE 36 36 native 0.0 M 22.7 M 19.8 M 0.650 0.88 0.88 7.89 130 1.03 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/6cf41183-6b89-4029-9270-370c94b59709/@@download/cross_correlation_plot/ENCFF002EBV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB009VYH michael-snyder:SMAD2_600-401-A59_Rb_K562_Rep2 ENCFF002EBV Illumina Genome Analyzer IIx 2016-10-09T17:09:59.557837+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qBQ0jv1XYYX2Fxk3f4fj ENCSR104AZQ https://www.encodeproject.org/experiments/ENCSR104AZQ transcription factor SMARCA2-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR587OQL https://www.encodeproject.org/experiments/ENCSR587OQL transcription factor SMARCA4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF350FCE https://www.encodeproject.org/files/ENCFF350FCE/@@download/ENCFF350FCE.bam ENCFF286YAW https://www.encodeproject.org/files/ENCFF286YAW/@@download/ENCFF286YAW.bam 51.0 M 0 50.0 M 0.981 PE 100 100 native 22.2 M 0.0 M 20.2 M 0.793 0.91 0.91 10.92 205 1.33 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/85b04088-91dc-4a14-9522-3e75bef10e36/@@download/cross_correlation_plot/ENCFF793GYQENCFF444MWP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB798DKB michael-snyder:L-1839 "ENCFF793GYQ,ENCFF444MWP" HiSeq 2000 2016-10-09T17:06:00.537619+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Fqj0jv1XvFGkBjjfjV0g ENCSR587OQL https://www.encodeproject.org/experiments/ENCSR587OQL transcription factor SMARCA4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF744TCZ https://www.encodeproject.org/files/ENCFF744TCZ/@@download/ENCFF744TCZ.bam ENCFF936WLL https://www.encodeproject.org/files/ENCFF936WLL/@@download/ENCFF936WLL.bam 64.2 M 0 62.8 M 0.978 PE 100 100 native 27.7 M 0.0 M 26.5 M 0.826 0.96 0.96 23.07 190 1.15 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cad5735-98cb-4884-8c27-c767b8974bb1/@@download/cross_correlation_plot/ENCFF310JLMENCFF670FTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB243QBC michael-snyder:L-1840 "ENCFF670FTR,ENCFF310JLM" HiSeq 2000 2016-10-09T17:07:05.218363+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Fy00jv1xPyfX78Yz4jY6 ENCSR643VTW https://www.encodeproject.org/experiments/ENCSR643VTW transcription factor SMARCA4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF606LUD https://www.encodeproject.org/files/ENCFF606LUD/@@download/ENCFF606LUD.bam ENCFF228IMW https://www.encodeproject.org/files/ENCFF228IMW/@@download/ENCFF228IMW.bam 68.3 M 0 67.1 M 0.983 PE 100 100 native 29.6 M 0.0 M 28.6 M 0.837 0.97 0.97 28.76 195 1.10 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/279aee57-7db6-4a3d-990e-dcdf21ddbd5a/@@download/cross_correlation_plot/ENCFF281JRRENCFF538IMN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB019JZA michael-snyder:L-1756 "ENCFF538IMN,ENCFF281JRR" HiSeq 2000 2016-10-09T17:14:32.284008+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yB80jv1QxJBfj5Zb2pQY ENCSR643VTW https://www.encodeproject.org/experiments/ENCSR643VTW transcription factor SMARCA4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF157HYJ https://www.encodeproject.org/files/ENCFF157HYJ/@@download/ENCFF157HYJ.bam ENCFF773FLB https://www.encodeproject.org/files/ENCFF773FLB/@@download/ENCFF773FLB.bam 50.8 M 0 49.1 M 0.966 PE 100 100 native 21.4 M 0.0 M 20.5 M 0.808 0.96 0.96 23.34 205 1.18 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/8abbd713-76dd-4544-932c-af8bcdc6e0e9/@@download/cross_correlation_plot/ENCFF218VUSENCFF890WRL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB242HBT michael-snyder:L-1757 "ENCFF890WRL,ENCFF218VUS" HiSeq 2000 2016-10-09T17:12:59.838900+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yFj0jv1XvFGkBjjfjQ4b ENCSR000EHN https://www.encodeproject.org/experiments/ENCSR000EHN transcription factor SMARCB1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF009UJV https://www.encodeproject.org/files/ENCFF009UJV/@@download/ENCFF009UJV.bam ENCFF498WIP https://www.encodeproject.org/files/ENCFF498WIP/@@download/ENCFF498WIP.bam 18.7 M 0 17.1 M 0.917 SE 28 28 28 0.0 M 12.7 M 12.0 M 0.641 0.94 0.94 16.94 90 1.03 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/7079b924-c10e-455c-af7b-580f13a1b3ce/@@download/cross_correlation_plot/ENCFF000YQK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGT ENCFF000YQK Illumina Genome Analyzer 2017-01-05T21:21:13.186568+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7qv003699GG65G542pjbB ENCSR000EHN https://www.encodeproject.org/experiments/ENCSR000EHN transcription factor SMARCB1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF172VKS https://www.encodeproject.org/files/ENCFF172VKS/@@download/ENCFF172VKS.bam ENCFF202MXB https://www.encodeproject.org/files/ENCFF202MXB/@@download/ENCFF202MXB.bam 18.9 M 0 17.7 M 0.934 SE 28 28 28 0.0 M 13.4 M 12.7 M 0.671 0.95 0.95 18.54 90 1.03 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/210657a7-3008-42d1-8354-75ecf15fb7bb/@@download/cross_correlation_plot/ENCFF000YQL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGU ENCFF000YQL Illumina Genome Analyzer 2017-01-05T21:21:10.006483+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7v2003697FPkPG58gbpbv ENCSR519WMW https://www.encodeproject.org/experiments/ENCSR519WMW transcription factor SMARCC2-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR157TCS https://www.encodeproject.org/experiments/ENCSR157TCS transcription factor SMARCE1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF387BDW https://www.encodeproject.org/files/ENCFF387BDW/@@download/ENCFF387BDW.bam ENCFF269YDC https://www.encodeproject.org/files/ENCFF269YDC/@@download/ENCFF269YDC.bam 62.0 M 0 56.2 M 0.906 PE 100 100 native 24.6 M 0.0 M 22.0 M 0.710 0.90 0.90 9.79 210 1.22 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/3015a078-d7b8-4ee6-8c66-856f1d46a9b3/@@download/cross_correlation_plot/ENCFF034ESFENCFF668WFT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB611UDM michael-snyder:L-1984 "ENCFF034ESF,ENCFF668WFT" HiSeq 2000 2016-10-09T17:03:53.703067+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Y000jv1QxJBfj5Zb2q56 ENCSR157TCS https://www.encodeproject.org/experiments/ENCSR157TCS transcription factor SMARCE1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF294UTM https://www.encodeproject.org/files/ENCFF294UTM/@@download/ENCFF294UTM.bam ENCFF816RJG https://www.encodeproject.org/files/ENCFF816RJG/@@download/ENCFF816RJG.bam 57.6 M 0 53.2 M 0.922 PE 100 100 native 23.4 M 0.0 M 21.9 M 0.760 0.94 0.94 15.34 210 1.15 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/653f1e1a-1da3-4594-94d5-a92b0fd6a282/@@download/cross_correlation_plot/ENCFF615EVJENCFF531SYI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB108AIV michael-snyder:L-1985 "ENCFF615EVJ,ENCFF531SYI" HiSeq 2000 2016-10-09T17:03:24.840212+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Y1Q0jv1zBYbxYJ5zzzZb ENCSR000EGW https://www.encodeproject.org/experiments/ENCSR000EGW transcription factor SMC3-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF355PQK https://www.encodeproject.org/files/ENCFF355PQK/@@download/ENCFF355PQK.bam ENCFF353WBI https://www.encodeproject.org/files/ENCFF353WBI/@@download/ENCFF353WBI.bam 14.5 M 0 12.7 M 0.874 SE 36 36 native 0.0 M 9.5 M 9.2 M 0.630 0.97 0.97 40.13 115 1.35 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5c303e4-b18b-4d9b-a9f0-b7e1a692b7df/@@download/cross_correlation_plot/ENCFF000YZX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOU ENCFF000YZX Illumina Genome Analyzer 2016-12-10T21:09:25.524175+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1638XQ03697K4B1J71pxzj4 ENCSR000EGW https://www.encodeproject.org/experiments/ENCSR000EGW transcription factor SMC3-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF365BCR https://www.encodeproject.org/files/ENCFF365BCR/@@download/ENCFF365BCR.bam ENCFF271XMG https://www.encodeproject.org/files/ENCFF271XMG/@@download/ENCFF271XMG.bam 16.3 M 0 15.1 M 0.922 SE 36 36 native 0.0 M 11.4 M 11.2 M 0.685 0.98 0.98 60.22 115 1.22 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/363bd809-2a1a-4496-a85f-e455c1433e70/@@download/cross_correlation_plot/ENCFF000YZY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOH ENCFF000YZY Illumina Genome Analyzer 2016-12-10T21:26:26.667143+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1638gQ03697K4B1J71pxzjJ ENCSR654CQU https://www.encodeproject.org/experiments/ENCSR654CQU "RNA binding protein,transcription factor" SNIP1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF519OGB https://www.encodeproject.org/files/ENCFF519OGB/@@download/ENCFF519OGB.bam ENCFF998KXK https://www.encodeproject.org/files/ENCFF998KXK/@@download/ENCFF998KXK.bam 54.8 M 0 52.2 M 0.953 PE 100 100 native 21.8 M 0.0 M 19.0 M 0.693 0.87 0.87 7.53 190 1.12 3.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/80244040-b3a4-400a-8bf5-da945ccf4e97/@@download/cross_correlation_plot/ENCFF165NMWENCFF411TJB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB035RSS michael-snyder:L-156 "ENCFF411TJB,ENCFF165NMW" HiSeq 2000 2016-10-09T17:13:13.888496+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yX80jv1XYYX2Fxk3f4pq ENCSR654CQU https://www.encodeproject.org/experiments/ENCSR654CQU "RNA binding protein,transcription factor" SNIP1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF883BFY https://www.encodeproject.org/files/ENCFF883BFY/@@download/ENCFF883BFY.bam ENCFF203EVC https://www.encodeproject.org/files/ENCFF203EVC/@@download/ENCFF203EVC.bam 59.2 M 0 57.2 M 0.966 PE 100 100 native 24.7 M 0.0 M 21.0 M 0.708 0.85 0.85 6.44 170 1.12 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/52068409-1ba8-4bdb-8fed-6b3435b2bdfb/@@download/cross_correlation_plot/ENCFF663NBIENCFF667DGY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB996ZEB michael-snyder:L-169 "ENCFF663NBI,ENCFF667DGY" HiSeq 2000 2016-10-09T17:14:11.713791+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yYj0jv1XYYX2Fxk3f4q3 ENCSR788RSW https://www.encodeproject.org/experiments/ENCSR788RSW transcription factor SOX6-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF508MVS https://www.encodeproject.org/files/ENCFF508MVS/@@download/ENCFF508MVS.bam ENCFF158AUC https://www.encodeproject.org/files/ENCFF158AUC/@@download/ENCFF158AUC.bam 97.6 M 0 93.6 M 0.960 PE 100 100 native 42.2 M 0.0 M 36.3 M 0.744 0.86 0.86 6.90 170 1.14 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fb72496-9956-4042-ac70-35fc0e19f731/@@download/cross_correlation_plot/ENCFF002DPJENCFF002EGF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB788HDH michael-snyder:734_A_TruSeq_CAGATC "ENCFF002EGF,ENCFF002DPJ" HiSeq 2000 2016-10-29T18:09:34.207951+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B27X80jv1pX1xqb1B8192B ENCSR788RSW https://www.encodeproject.org/experiments/ENCSR788RSW transcription factor SOX6-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF022LJH https://www.encodeproject.org/files/ENCFF022LJH/@@download/ENCFF022LJH.bam ENCFF244NNS https://www.encodeproject.org/files/ENCFF244NNS/@@download/ENCFF244NNS.bam 88.9 M 0 85.5 M 0.962 PE 100 100 native 38.6 M 0.0 M 33.1 M 0.745 0.86 0.86 6.79 190 1.21 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5e75ee0-2be5-4c3f-87ed-41daf9aeba55/@@download/cross_correlation_plot/ENCFF002DUAENCFF002DPM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB134QRS michael-snyder:734_A_TruSeq_GATCAG "ENCFF002DUA,ENCFF002DPM" HiSeq 2000 2016-10-29T18:10:10.697433+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B27bQ0jv1vJ6xQfbB7FXbj ENCSR815ZDS https://www.encodeproject.org/experiments/ENCSR815ZDS transcription factor SREBF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF623PVZ https://www.encodeproject.org/files/ENCFF623PVZ/@@download/ENCFF623PVZ.bam ENCFF252IYG https://www.encodeproject.org/files/ENCFF252IYG/@@download/ENCFF252IYG.bam 14.9 M 0 14.2 M 0.957 SE 36 36 native 0.0 M 10.7 M 10.2 M 0.683 0.96 0.96 23.07 90 1.04 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/d4f7641f-aff2-4692-866d-ccbf2a28137d/@@download/cross_correlation_plot/ENCFF002EEL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB820QPG michael-snyder:SREBP1_sc-8984_K562_Rep1 ENCFF002EEL Illumina Genome Analyzer IIx 2016-10-09T17:33:06.597601+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ZXQ0jv1XvFGkBjjfjQvk ENCSR815ZDS https://www.encodeproject.org/experiments/ENCSR815ZDS transcription factor SREBF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF405EME https://www.encodeproject.org/files/ENCFF405EME/@@download/ENCFF405EME.bam ENCFF012STR https://www.encodeproject.org/files/ENCFF012STR/@@download/ENCFF012STR.bam 26.0 M 0 24.4 M 0.936 SE 36 36 native 0.0 M 18.2 M 17.5 M 0.672 0.97 0.97 30.21 90 1.04 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/30a3c809-f31b-49a0-9464-71163dffb60f/@@download/cross_correlation_plot/ENCFF002EEP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB187NCV michael-snyder:SREBP1_sc-8984_K562_Rep2 ENCFF002EEP Illumina Genome Analyzer IIx 2016-10-09T17:34:10.959230+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ZYj0jv1XvFGkBjjfjQx2 ENCSR000EHK https://www.encodeproject.org/experiments/ENCSR000EHK transcription factor STAT1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF339BJP https://www.encodeproject.org/files/ENCFF339BJP/@@download/ENCFF339BJP.bam ENCFF263NHR https://www.encodeproject.org/files/ENCFF263NHR/@@download/ENCFF263NHR.bam 21.4 M 0 15.9 M 0.741 SE 27 27 27 0.0 M 10.0 M 9.8 M 0.456 0.98 0.98 55.53 105 1.11 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4d240d8-15c7-4b42-bf9d-a7c152e22031/@@download/cross_correlation_plot/ENCFF000ZBF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUJ ENCFF000ZBF Illumina Genome Analyzer 2017-02-24T16:24:01.018553+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbGYQ0369F6YF1Fkffzy3y ENCSR000EHK https://www.encodeproject.org/experiments/ENCSR000EHK transcription factor STAT1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF470IST https://www.encodeproject.org/files/ENCFF470IST/@@download/ENCFF470IST.bam ENCFF740GXI https://www.encodeproject.org/files/ENCFF740GXI/@@download/ENCFF740GXI.bam 11.5 M 0 9.3 M 0.806 SE 34 27 27 0.0 M 5.3 M 5.3 M 0.461 0.99 0.99 150.57 100 1.10 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/ece1ef9d-b122-4bc7-b42d-3cda38fb037b/@@download/cross_correlation_plot/ENCFF000ZAE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUI ENCFF000ZAE Illumina Genome Analyzer 2017-02-24T16:23:43.643858+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbGk80369F6bVG18GpzkzY ENCSR894CGX https://www.encodeproject.org/experiments/ENCSR894CGX "RNA binding protein,transcription factor" SUPT5H-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF079TBV https://www.encodeproject.org/files/ENCFF079TBV/@@download/ENCFF079TBV.bam ENCFF625EVD https://www.encodeproject.org/files/ENCFF625EVD/@@download/ENCFF625EVD.bam 58.1 M 0 57.3 M 0.985 PE 100 100 native 25.3 M 0.0 M 24.7 M 0.849 0.97 0.97 39.61 215 1.23 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/d65346cb-9a70-48f3-8715-7db48f7180c5/@@download/cross_correlation_plot/ENCFF086VLIENCFF397FZD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB054IOO michael-snyder:L-2065 "ENCFF086VLI,ENCFF397FZD" HiSeq 2000 2016-10-09T17:08:56.249130+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Bgj0jv1XYYX2Fxk3f6B7 ENCSR894CGX https://www.encodeproject.org/experiments/ENCSR894CGX "RNA binding protein,transcription factor" SUPT5H-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF772XIR https://www.encodeproject.org/files/ENCFF772XIR/@@download/ENCFF772XIR.bam ENCFF256DMO https://www.encodeproject.org/files/ENCFF256DMO/@@download/ENCFF256DMO.bam 62.2 M 0 61.3 M 0.986 PE 100 100 native 27.1 M 0.0 M 26.2 M 0.843 0.97 0.97 31.32 210 1.25 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/acb66124-539a-43d1-89f2-45ad600f5cac/@@download/cross_correlation_plot/ENCFF383EJJENCFF077SPQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB477XAS michael-snyder:L-2066 "ENCFF383EJJ,ENCFF077SPQ" HiSeq 2000 2016-10-09T17:09:17.802241+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Bkj0jv1xPyfX78Yz4jX8 ENCSR412CTM https://www.encodeproject.org/experiments/ENCSR412CTM "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF986KSB https://www.encodeproject.org/files/ENCFF986KSB/@@download/ENCFF986KSB.bam ENCFF455NNI https://www.encodeproject.org/files/ENCFF455NNI/@@download/ENCFF455NNI.bam 30.9 M 0 30.6 M 0.992 SE 36 36 native 0.0 M 23.7 M 23.0 M 0.746 0.97 0.97 38.30 115 1.04 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b67cfdb-8d0a-4bb0-9263-195928954403/@@download/cross_correlation_plot/ENCFF002EWO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB432TRR michael-snyder:SUZ12_3737_K562_Rep1 ENCFF002EWO Illumina Genome Analyzer IIx 2016-10-09T17:01:23.777594+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Q8j0jv1QxJBfj5Zb2q2v ENCSR412CTM https://www.encodeproject.org/experiments/ENCSR412CTM "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF614RBF https://www.encodeproject.org/files/ENCFF614RBF/@@download/ENCFF614RBF.bam ENCFF328YTB https://www.encodeproject.org/files/ENCFF328YTB/@@download/ENCFF328YTB.bam 27.1 M 0 26.9 M 0.990 SE 36 36 native 0.0 M 20.5 M 18.3 M 0.673 0.90 0.90 9.34 125 1.05 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e83b0d7-d224-4336-bc25-3f3f1ef2ebd0/@@download/cross_correlation_plot/ENCFF002EWP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB909AKQ michael-snyder:SUZ12_3737_K562_Rep2 ENCFF002EWP Illumina Genome Analyzer IIx 2016-10-09T17:01:24.658503+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4QB00jv1XYYX2Fxk3f5V4 ENCSR000EHB https://www.encodeproject.org/experiments/ENCSR000EHB transcription factor TAL1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF346VYS https://www.encodeproject.org/files/ENCFF346VYS/@@download/ENCFF346VYS.bam ENCFF737NMZ https://www.encodeproject.org/files/ENCFF737NMZ/@@download/ENCFF737NMZ.bam 32.1 M 0 30.1 M 0.936 SE 36 28 28 0.0 M 21.8 M 19.9 M 0.619 0.91 0.94 20.73 115 1.67 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/5399e8a1-4382-47ca-b1c7-614a9364cec9/@@download/cross_correlation_plot/ENCFF000ZBX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIZ ENCFF000ZBX Illumina Genome Analyzer 2017-01-05T21:26:11.959986+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7kb80369P4Vg0G4JKxZY5 ENCSR000EHB https://www.encodeproject.org/experiments/ENCSR000EHB transcription factor TAL1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF067SPF https://www.encodeproject.org/files/ENCFF067SPF/@@download/ENCFF067SPF.bam ENCFF688PJI https://www.encodeproject.org/files/ENCFF688PJI/@@download/ENCFF688PJI.bam 21.8 M 0 20.1 M 0.921 SE 36 28 28 0.0 M 14.5 M 13.3 M 0.607 0.91 0.95 25.89 115 2.31 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb4e6805-4c83-4c50-a9f6-79d9a5aa245f/@@download/cross_correlation_plot/ENCFF000ZBR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIY ENCFF000ZBR Illumina Genome Analyzer 2017-01-05T21:26:03.005815+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7kq00369Pyf0JG49f334b ENCSR106FRG https://www.encodeproject.org/experiments/ENCSR106FRG transcription factor TAL1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF695TZQ https://www.encodeproject.org/files/ENCFF695TZQ/@@download/ENCFF695TZQ.bam ENCFF829RRK https://www.encodeproject.org/files/ENCFF829RRK/@@download/ENCFF829RRK.bam 53.9 M 0 52.6 M 0.977 PE 100 100 native 23.3 M 0.0 M 20.5 M 0.761 0.88 0.88 8.14 205 1.58 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb63d7e8-d30c-4302-946f-92c4bbb48a2d/@@download/cross_correlation_plot/ENCFF793WFYENCFF145TXO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB983GRU michael-snyder:L-301 "ENCFF145TXO,ENCFF793WFY" HiSeq 2000 2016-10-09T17:34:35.755145+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5q000jv1x3KYJK9kQ04Yk ENCSR106FRG https://www.encodeproject.org/experiments/ENCSR106FRG transcription factor TAL1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF525CPA https://www.encodeproject.org/files/ENCFF525CPA/@@download/ENCFF525CPA.bam ENCFF793XCW https://www.encodeproject.org/files/ENCFF793XCW/@@download/ENCFF793XCW.bam 57.1 M 0 55.7 M 0.976 PE 100 100 native 24.7 M 0.0 M 22.7 M 0.794 0.92 0.92 11.83 195 2.12 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8cbb4a2-ae15-42d4-ae82-019695c7ac8a/@@download/cross_correlation_plot/ENCFF998YDAENCFF768SQO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB709SXN michael-snyder:L-302 "ENCFF998YDA,ENCFF768SQO" HiSeq 2000 2016-10-09T17:33:52.746140+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5q200jv1b6Q2yZ51Zb5GZ ENCSR033VAZ https://www.encodeproject.org/experiments/ENCSR033VAZ "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF263MBV https://www.encodeproject.org/files/ENCFF263MBV/@@download/ENCFF263MBV.bam ENCFF145DUR https://www.encodeproject.org/files/ENCFF145DUR/@@download/ENCFF145DUR.bam 80.1 M 0 78.3 M 0.977 PE 100 100 native 35.3 M 0.0 M 32.8 M 0.818 0.93 0.93 14.13 210 1.07 4.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/292aab57-99af-418b-986a-d546c9b098ae/@@download/cross_correlation_plot/ENCFF996BVXENCFF654EXQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB224WPQ michael-snyder:L-422 "ENCFF654EXQ,ENCFF996BVX" HiSeq 2000 2016-10-09T17:15:51.193168+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3z1j0jv1XYYX2Fxk3f4qX ENCSR033VAZ https://www.encodeproject.org/experiments/ENCSR033VAZ "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF860IRS https://www.encodeproject.org/files/ENCFF860IRS/@@download/ENCFF860IRS.bam ENCFF642SQY https://www.encodeproject.org/files/ENCFF642SQY/@@download/ENCFF642SQY.bam 74.7 M 0 73.9 M 0.989 PE 100 100 native 32.9 M 0.0 M 30.9 M 0.826 0.94 0.94 16.23 185 1.08 5.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/49457b9c-002d-4802-9593-e878b95b3597/@@download/cross_correlation_plot/ENCFF922VLOENCFF228EWB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB166HWY michael-snyder:L-147 "ENCFF922VLO,ENCFF228EWB" HiSeq 2000 2016-10-09T17:14:11.046409+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3z380jv1g5yGjfvVx0KqY ENCSR000EGA https://www.encodeproject.org/experiments/ENCSR000EGA transcription factor TBL1XR1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF946HWT https://www.encodeproject.org/files/ENCFF946HWT/@@download/ENCFF946HWT.bam ENCFF397AQJ https://www.encodeproject.org/files/ENCFF397AQJ/@@download/ENCFF397AQJ.bam 30.6 M 0 29.6 M 0.967 SE 36 36 native 0.0 M 21.9 M 21.4 M 0.700 0.98 0.98 51.88 115 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4773515-a0d3-4630-98b3-73783be5a227/@@download/cross_correlation_plot/ENCFF000ZAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANH ENCFF000ZAY Illumina Genome Analyzer 2016-12-10T19:14:54.933257+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16294Q03697xKX68qyy2k3b ENCSR000EGA https://www.encodeproject.org/experiments/ENCSR000EGA transcription factor TBL1XR1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF964COC https://www.encodeproject.org/files/ENCFF964COC/@@download/ENCFF964COC.bam ENCFF769NEJ https://www.encodeproject.org/files/ENCFF769NEJ/@@download/ENCFF769NEJ.bam 27.0 M 0 26.0 M 0.962 SE 36 36 native 0.0 M 18.9 M 18.6 M 0.690 0.98 0.98 66.63 90 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b514e27-afbe-4a53-880c-022268f1eb09/@@download/cross_correlation_plot/ENCFF000ZBA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQR ENCFF000ZBA Illumina Genome Analyzer 2016-12-10T17:48:43.362018+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1629900369Bxb30J6x5bYyF ENCSR189TRZ https://www.encodeproject.org/experiments/ENCSR189TRZ transcription factor TCF12-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF283SLJ https://www.encodeproject.org/files/ENCFF283SLJ/@@download/ENCFF283SLJ.bam ENCFF362IGC https://www.encodeproject.org/files/ENCFF362IGC/@@download/ENCFF362IGC.bam 60.2 M 0 57.1 M 0.948 PE 100 100 native 24.9 M 0.0 M 23.6 M 0.783 0.95 0.95 18.86 215 1.13 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/d22a1a13-3e3e-4403-b3b4-ba90a9c38a74/@@download/cross_correlation_plot/ENCFF043MCWENCFF520WVU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB631MXP michael-snyder:L-2165 "ENCFF520WVU,ENCFF043MCW" HiSeq 2000 2017-01-26T00:01:52.173432+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB280369F2pz096jxpg9j ENCSR189TRZ https://www.encodeproject.org/experiments/ENCSR189TRZ transcription factor TCF12-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF532BVM https://www.encodeproject.org/files/ENCFF532BVM/@@download/ENCFF532BVM.bam ENCFF413MNX https://www.encodeproject.org/files/ENCFF413MNX/@@download/ENCFF413MNX.bam 72.7 M 0 68.2 M 0.939 PE 100 100 native 29.4 M 0.0 M 27.5 M 0.757 0.94 0.94 15.80 200 1.14 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/33a0ba29-da2e-41b4-970f-991bdad6532e/@@download/cross_correlation_plot/ENCFF007HDSENCFF873EXA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB547ZUO michael-snyder:L-2166 "ENCFF873EXA,ENCFF007HDS" HiSeq 2000 2017-01-26T01:05:13.943280+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBy00369BQ3qg2vYVZ66Y ENCSR888XZK https://www.encodeproject.org/experiments/ENCSR888XZK transcription factor TCF7L2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF425MJK https://www.encodeproject.org/files/ENCFF425MJK/@@download/ENCFF425MJK.bam ENCFF362LTA https://www.encodeproject.org/files/ENCFF362LTA/@@download/ENCFF362LTA.bam 35.2 M 0 31.0 M 0.878 SE 36 36 native 0.0 M 23.5 M 15.9 M 0.452 0.69 0.67 2.81 125 1.11 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/3faca8f7-2ebf-4839-ba26-ffb4ea64d69e/@@download/cross_correlation_plot/ENCFF002EWU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB897EPQ michael-snyder:TCF4_2569_K562_Rep1 ENCFF002EWU Illumina Genome Analyzer IIx 2016-10-09T17:00:10.086091+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XGj0jv1xPyfX78Yz4jGQ ENCSR888XZK https://www.encodeproject.org/experiments/ENCSR888XZK transcription factor TCF7L2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF600TNR https://www.encodeproject.org/files/ENCFF600TNR/@@download/ENCFF600TNR.bam ENCFF127SRR https://www.encodeproject.org/files/ENCFF127SRR/@@download/ENCFF127SRR.bam 29.5 M 0 23.5 M 0.798 SE 36 36 native 0.0 M 18.0 M 16.3 M 0.555 0.91 0.91 11.23 120 1.05 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d14a898-65aa-4b47-a958-398f9a203a33/@@download/cross_correlation_plot/ENCFF002EWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB687QGX michael-snyder:TCF4_2569_K562_Rep2 ENCFF002EWK Illumina Genome Analyzer IIx 2016-10-09T16:59:46.274356+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XK00jv1f60PxyZ9JGPVK ENCSR264CZJ https://www.encodeproject.org/experiments/ENCSR264CZJ transcription factor THRA-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF574EKT https://www.encodeproject.org/files/ENCFF574EKT/@@download/ENCFF574EKT.bam ENCFF244GIS https://www.encodeproject.org/files/ENCFF244GIS/@@download/ENCFF244GIS.bam 74.7 M 0 66.6 M 0.891 PE 100 100 native 28.7 M 0.0 M 20.3 M 0.543 0.71 0.71 3.39 230 1.07 5.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf7a6dff-797f-44e5-b1b7-b622a122d0f7/@@download/cross_correlation_plot/ENCFF695OJNENCFF405EAB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB921LQN michael-snyder:L-2027 "ENCFF695OJN,ENCFF405EAB" HiSeq 4000 2016-09-16T03:19:55.727127+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZY00369Fb155KvKP919v ENCSR264CZJ https://www.encodeproject.org/experiments/ENCSR264CZJ transcription factor THRA-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF749BVC https://www.encodeproject.org/files/ENCFF749BVC/@@download/ENCFF749BVC.bam ENCFF446AVI https://www.encodeproject.org/files/ENCFF446AVI/@@download/ENCFF446AVI.bam 116.6 M 0 105.9 M 0.909 PE 100 100 native 45.8 M 0.0 M 34.6 M 0.593 0.76 0.76 4.06 220 1.05 3.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb891660-79cd-472f-8e8e-6b68b6c99d1e/@@download/cross_correlation_plot/ENCFF097JYZENCFF499VMV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB304OIE michael-snyder:L-2028 "ENCFF499VMV,ENCFF097JYZ" HiSeq 4000 2016-09-16T03:21:18.927872+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZfQ0369Fb155KvKP91B7 ENCSR583BSY https://www.encodeproject.org/experiments/ENCSR583BSY "RNA binding protein,transcription factor" THRAP3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF859FSV https://www.encodeproject.org/files/ENCFF859FSV/@@download/ENCFF859FSV.bam ENCFF262BAM https://www.encodeproject.org/files/ENCFF262BAM/@@download/ENCFF262BAM.bam 99.6 M 0 92.3 M 0.926 PE 100 100 native 39.9 M 0.0 M 28.5 M 0.572 0.72 0.71 3.42 240 1.05 4.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e986a96-4e99-4ee8-950d-f6e235f429cf/@@download/cross_correlation_plot/ENCFF906YWYENCFF407NOV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB962PPR michael-snyder:L-2213 "ENCFF407NOV,ENCFF906YWY" HiSeq 4000 2016-09-16T03:19:29.913511+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyzYQ0369JzPBF2JXk4PZ2 ENCSR583BSY https://www.encodeproject.org/experiments/ENCSR583BSY "RNA binding protein,transcription factor" THRAP3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF622JEB https://www.encodeproject.org/files/ENCFF622JEB/@@download/ENCFF622JEB.bam ENCFF525ICG https://www.encodeproject.org/files/ENCFF525ICG/@@download/ENCFF525ICG.bam 200.6 M 0 155.8 M 0.777 PE 100 100 native 67.5 M 0.0 M 52.4 M 0.523 0.78 0.77 4.37 215 1.04 2.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f0da181-e86d-4dc4-af9c-a2ba2daa31c7/@@download/cross_correlation_plot/ENCFF872KBIENCFF917NEI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB829TKM michael-snyder:L-2214 "ENCFF872KBI,ENCFF917NEI" HiSeq 4000 2016-09-16T03:24:46.409523+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyzgQ0369JzPBF2JXk4Pb6 ENCSR213HBY https://www.encodeproject.org/experiments/ENCSR213HBY RNA binding protein TOE1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF988ZHP https://www.encodeproject.org/files/ENCFF988ZHP/@@download/ENCFF988ZHP.bam ENCFF511LLL https://www.encodeproject.org/files/ENCFF511LLL/@@download/ENCFF511LLL.bam 118.7 M 0 112.9 M 0.951 PE 100 100 native 49.2 M 0.0 M 39.9 M 0.672 0.81 0.81 5.07 230 1.14 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/8887102b-f441-4a09-8d38-f384a3e2ff73/@@download/cross_correlation_plot/ENCFF831SWKENCFF738RCP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB963MXU michael-snyder:L-2242 "ENCFF831SWK,ENCFF738RCP" HiSeq 4000 2016-11-02T23:13:52.301587+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Gbg7Q0369G2j95P4QbpbpP ENCSR213HBY https://www.encodeproject.org/experiments/ENCSR213HBY RNA binding protein TOE1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF618GRR https://www.encodeproject.org/files/ENCFF618GRR/@@download/ENCFF618GRR.bam ENCFF076FAM https://www.encodeproject.org/files/ENCFF076FAM/@@download/ENCFF076FAM.bam 103.0 M 0 100.3 M 0.974 PE 100 100 native 43.8 M 0.0 M 27.2 M 0.529 0.62 0.63 2.77 220 1.10 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/65e39626-ba20-433d-9cdf-548f992917da/@@download/cross_correlation_plot/ENCFF640ZCMENCFF011GIB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB811RXM michael-snyder:L-2289 "ENCFF011GIB,ENCFF640ZCM" HiSeq 4000 2016-11-02T23:11:39.282770+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbgF80369F27BX7Gp08ybz ENCSR907MZR https://www.encodeproject.org/experiments/ENCSR907MZR transcription factor TRIM24-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF551IFV https://www.encodeproject.org/files/ENCFF551IFV/@@download/ENCFF551IFV.bam ENCFF545YDJ https://www.encodeproject.org/files/ENCFF545YDJ/@@download/ENCFF545YDJ.bam 69.8 M 0 66.7 M 0.956 PE 100 100 native 29.4 M 0.0 M 27.7 M 0.794 0.94 0.94 16.91 205 1.17 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/35ded8ea-7dcb-46e4-99ed-f7de964e26f4/@@download/cross_correlation_plot/ENCFF107WKNENCFF950QCU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB465YBO michael-snyder:L-2167 "ENCFF107WKN,ENCFF950QCU" HiSeq 2000 2016-10-09T17:13:38.835608+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41680jv1QxJBfj5Zb2pXz ENCSR907MZR https://www.encodeproject.org/experiments/ENCSR907MZR transcription factor TRIM24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF923LMN https://www.encodeproject.org/files/ENCFF923LMN/@@download/ENCFF923LMN.bam ENCFF071CRE https://www.encodeproject.org/files/ENCFF071CRE/@@download/ENCFF071CRE.bam 59.0 M 0 56.0 M 0.951 PE 100 100 native 24.7 M 0.0 M 23.4 M 0.795 0.95 0.95 20.04 210 1.22 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d8e40a5-d2cf-48b1-b0c7-ab117e2a2c55/@@download/cross_correlation_plot/ENCFF334HNSENCFF300IMG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB447SXG michael-snyder:L-2168 "ENCFF300IMG,ENCFF334HNS" HiSeq 2000 2016-10-09T17:05:51.436454+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv417Q0jv1xPyfX78Yz4gjB ENCSR213VUI https://www.encodeproject.org/experiments/ENCSR213VUI RNA binding protein TRIM25-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF541OEZ https://www.encodeproject.org/files/ENCFF541OEZ/@@download/ENCFF541OEZ.bam ENCFF054HRS https://www.encodeproject.org/files/ENCFF054HRS/@@download/ENCFF054HRS.bam 58.9 M 0 54.6 M 0.926 PE 100 100 native 23.6 M 0.0 M 21.4 M 0.725 0.91 0.91 10.49 215 1.07 4.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/88f644a9-6169-4af4-8e53-27b3ad5a10ac/@@download/cross_correlation_plot/ENCFF973JIIENCFF553CSZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB502JVC michael-snyder:L-2031 "ENCFF973JII,ENCFF553CSZ" HiSeq 2000 2016-10-09T17:36:31.872547+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63680jv1YvGVzF100Zf7B ENCSR213VUI https://www.encodeproject.org/experiments/ENCSR213VUI RNA binding protein TRIM25-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF063VLB https://www.encodeproject.org/files/ENCFF063VLB/@@download/ENCFF063VLB.bam ENCFF575UDJ https://www.encodeproject.org/files/ENCFF575UDJ/@@download/ENCFF575UDJ.bam 69.1 M 0 64.4 M 0.931 PE 100 100 native 27.7 M 0.0 M 26.2 M 0.758 0.95 0.95 19.09 205 1.06 4.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/85cbb5d5-0d0d-4483-ac0e-848d46bff5a9/@@download/cross_correlation_plot/ENCFF133ABTENCFF082ZXS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB609TDY michael-snyder:L-2032 "ENCFF082ZXS,ENCFF133ABT" HiSeq 2000 2016-10-09T17:36:49.690011+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv638Q0jv1fXGPZpVVpjYQg ENCSR474CVP https://www.encodeproject.org/experiments/ENCSR474CVP transcription factor TRIM28-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR154EIH https://www.encodeproject.org/experiments/ENCSR154EIH transcription factor TRIP13-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF923ISY https://www.encodeproject.org/files/ENCFF923ISY/@@download/ENCFF923ISY.bam ENCFF085XSB https://www.encodeproject.org/files/ENCFF085XSB/@@download/ENCFF085XSB.bam 48.0 M 0 45.2 M 0.941 PE 100 100 native 19.7 M 0.0 M 14.8 M 0.618 0.75 0.74 3.75 220 1.11 6.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/9dc2a511-38f9-4a93-bcd7-ae3633a4781f/@@download/cross_correlation_plot/ENCFF451CTAENCFF008APY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB739RDM michael-snyder:L-198 "ENCFF451CTA,ENCFF008APY" HiSeq 2000 2017-03-01T18:05:34.910865+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pqpJ803694qzYk5PF5yKqp ENCSR154EIH https://www.encodeproject.org/experiments/ENCSR154EIH transcription factor TRIP13-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF942SZJ https://www.encodeproject.org/files/ENCFF942SZJ/@@download/ENCFF942SZJ.bam ENCFF563NRA https://www.encodeproject.org/files/ENCFF563NRA/@@download/ENCFF563NRA.bam 72.9 M 0 70.9 M 0.973 PE 100 100 native 30.6 M 0.0 M 27.4 M 0.752 0.90 0.90 9.53 205 1.06 4.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/d368f3a6-53a7-4dd7-9652-f3d154faa881/@@download/cross_correlation_plot/ENCFF387SYYENCFF050QIO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB953OAM michael-snyder:L-206 "ENCFF050QIO,ENCFF387SYY" HiSeq 2000 2017-03-01T18:06:51.011438+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pqpYQ0369FZq3f5Q148qz8 ENCSR136LVJ https://www.encodeproject.org/experiments/ENCSR136LVJ transcription factor TRIP4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF190YPD https://www.encodeproject.org/files/ENCFF190YPD/@@download/ENCFF190YPD.bam ENCFF893EFO https://www.encodeproject.org/files/ENCFF893EFO/@@download/ENCFF893EFO.bam 84.6 M 0 75.8 M 0.897 PE 100 100 native 32.7 M 0.0 M 29.6 M 0.699 0.91 0.91 10.45 215 1.05 4.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/61460425-d144-4e56-ae8e-d036bf5e9498/@@download/cross_correlation_plot/ENCFF788TBMENCFF737HSZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB691WPZ michael-snyder:L-2877 "ENCFF737HSZ,ENCFF788TBM" HiSeq 4000 2016-09-16T03:19:10.105687+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyzGj0369J6bkz8ZJ7qyPV ENCSR136LVJ https://www.encodeproject.org/experiments/ENCSR136LVJ transcription factor TRIP4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF220ETO https://www.encodeproject.org/files/ENCFF220ETO/@@download/ENCFF220ETO.bam ENCFF750FKU https://www.encodeproject.org/files/ENCFF750FKU/@@download/ENCFF750FKU.bam 95.7 M 0 81.2 M 0.848 PE 100 100 native 35.2 M 0.0 M 29.4 M 0.613 0.84 0.83 5.90 215 1.06 4.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f1375e9-e07f-4594-a920-248c01a465b8/@@download/cross_correlation_plot/ENCFF829ATAENCFF679TNA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB424ZOY michael-snyder:L-2878 "ENCFF829ATA,ENCFF679TNA" HiSeq 4000 2016-09-16T03:19:07.816997+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyzPQ0369BvpJbQkBjPZXJ ENCSR000EHG https://www.encodeproject.org/experiments/ENCSR000EHG transcription factor USF2-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF434RFX https://www.encodeproject.org/files/ENCFF434RFX/@@download/ENCFF434RFX.bam ENCFF241NUY https://www.encodeproject.org/files/ENCFF241NUY/@@download/ENCFF241NUY.bam 25.5 M 0 21.3 M 0.836 SE 36 36 native 0.0 M 15.3 M 15.2 M 0.596 0.99 0.99 99.10 110 1.04 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/acd9b064-d8a2-4d32-a0db-dd900fd3086d/@@download/cross_correlation_plot/ENCFF000ZDJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIX ENCFF000ZDJ Illumina Genome Analyzer 2016-12-10T21:30:22.499987+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16377j036969X0jJ6p3ffZ4 ENCSR000EHG https://www.encodeproject.org/experiments/ENCSR000EHG transcription factor USF2-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF420ZVF https://www.encodeproject.org/files/ENCFF420ZVF/@@download/ENCFF420ZVF.bam ENCFF424FKD https://www.encodeproject.org/files/ENCFF424FKD/@@download/ENCFF424FKD.bam 24.2 M 0 21.0 M 0.869 SE 36 36 native 0.0 M 15.2 M 15.0 M 0.620 0.99 0.99 86.77 110 1.06 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/9dfe05f3-5ea0-47f1-b1b2-39b061f112e6/@@download/cross_correlation_plot/ENCFF000ZDK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABI ENCFF000ZDK Illumina Genome Analyzer 2016-12-10T21:28:20.419157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1637GQ036933PVVJ7Qq01Bp ENCSR139SGQ https://www.encodeproject.org/experiments/ENCSR139SGQ "transcription factor,chromatin remodeller" UTY-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF740CMK https://www.encodeproject.org/files/ENCFF740CMK/@@download/ENCFF740CMK.bam ENCFF773LND https://www.encodeproject.org/files/ENCFF773LND/@@download/ENCFF773LND.bam 81.2 M 0 77.9 M 0.959 PE 100 100 native 35.1 M 0.0 M 24.4 M 0.601 0.70 0.68 2.89 225 1.08 6.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f52c536-75e8-46f1-af7c-d5091e9f9dea/@@download/cross_correlation_plot/ENCFF447QDLENCFF381MRU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB866QNM michael-snyder:L-461 "ENCFF381MRU,ENCFF447QDL" HiSeq 2000 2016-10-09T16:58:40.621201+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47F80jv1f60PxyZ9JGP6j ENCSR139SGQ https://www.encodeproject.org/experiments/ENCSR139SGQ "transcription factor,chromatin remodeller" UTY-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF925ACL https://www.encodeproject.org/files/ENCFF925ACL/@@download/ENCFF925ACL.bam ENCFF424SBS https://www.encodeproject.org/files/ENCFF424SBS/@@download/ENCFF424SBS.bam 70.5 M 0 68.9 M 0.977 PE 100 100 native 30.6 M 0.0 M 24.4 M 0.692 0.80 0.79 4.66 170 1.10 4.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/78b19a00-b6a4-4b67-a11b-fd1c6a444dc5/@@download/cross_correlation_plot/ENCFF473JPBENCFF697TXZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB371WMV michael-snyder:L-143 "ENCFF697TXZ,ENCFF473JPB" HiSeq 2000 2016-10-09T17:06:20.363633+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47J00jv1XvFGkBjjfjQP2 ENCSR107RHZ https://www.encodeproject.org/experiments/ENCSR107RHZ "RNA binding protein,transcription factor" YBX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF195WOK https://www.encodeproject.org/files/ENCFF195WOK/@@download/ENCFF195WOK.bam ENCFF473THN https://www.encodeproject.org/files/ENCFF473THN/@@download/ENCFF473THN.bam 64.2 M 0 60.6 M 0.944 PE 100 100 native 25.2 M 0.0 M 22.2 M 0.691 0.88 0.88 8.03 170 1.09 4.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/73d24c16-8151-4199-852d-1ae0b9c145a0/@@download/cross_correlation_plot/ENCFF011GGXENCFF183DJQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB651CYS michael-snyder:L-157 "ENCFF183DJQ,ENCFF011GGX" HiSeq 2000 2016-10-09T17:09:37.780965+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69GQ0jv1QkfFX8V1vJbGx ENCSR107RHZ https://www.encodeproject.org/experiments/ENCSR107RHZ "RNA binding protein,transcription factor" YBX1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF715AMR https://www.encodeproject.org/files/ENCFF715AMR/@@download/ENCFF715AMR.bam ENCFF502QIV https://www.encodeproject.org/files/ENCFF502QIV/@@download/ENCFF502QIV.bam 59.4 M 0 57.5 M 0.968 PE 100 100 native 25.0 M 0.0 M 22.9 M 0.770 0.92 0.91 11.56 190 1.08 4.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1827c50-4924-475d-b5a5-3d20c5a99368/@@download/cross_correlation_plot/ENCFF909OVDENCFF079PYC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB344DXR michael-snyder:L-170 "ENCFF909OVD,ENCFF079PYC" HiSeq 2000 2016-10-09T17:09:21.101746+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69KQ0jv1QZp37BGvK2BPp ENCSR567JEU https://www.encodeproject.org/experiments/ENCSR567JEU "RNA binding protein,transcription factor" YBX3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF954HWS https://www.encodeproject.org/files/ENCFF954HWS/@@download/ENCFF954HWS.bam ENCFF887DZF https://www.encodeproject.org/files/ENCFF887DZF/@@download/ENCFF887DZF.bam 60.4 M 0 58.8 M 0.973 PE 100 100 native 25.9 M 0.0 M 23.4 M 0.777 0.91 0.90 10.24 210 1.06 5.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/cad829e2-fcb8-4898-b4a7-e952642d6c9c/@@download/cross_correlation_plot/ENCFF276AYDENCFF519SRC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB315RYQ michael-snyder:L-1824 "ENCFF519SRC,ENCFF276AYD" HiSeq 2000 2016-10-09T17:13:57.985904+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv407Q0jv1g5yGjfvVx0Kvz ENCSR567JEU https://www.encodeproject.org/experiments/ENCSR567JEU "RNA binding protein,transcription factor" YBX3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF124RUL https://www.encodeproject.org/files/ENCFF124RUL/@@download/ENCFF124RUL.bam ENCFF416CRZ https://www.encodeproject.org/files/ENCFF416CRZ/@@download/ENCFF416CRZ.bam 64.8 M 0 63.7 M 0.984 PE 100 100 native 28.2 M 0.0 M 27.4 M 0.846 0.97 0.97 36.93 200 1.06 4.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/fde67dad-f992-4369-8e8b-abef8135cfd7/@@download/cross_correlation_plot/ENCFF590TAHENCFF504AIH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB538QJH michael-snyder:L-1825 "ENCFF504AIH,ENCFF590TAH" HiSeq 2000 2016-10-09T17:14:17.428953+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40980jv1g5yGjfvVx0Kx7 ENCSR230PTV https://www.encodeproject.org/experiments/ENCSR230PTV transcription factor ZBTB2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF273NVY https://www.encodeproject.org/files/ENCFF273NVY/@@download/ENCFF273NVY.bam ENCFF793MDW https://www.encodeproject.org/files/ENCFF793MDW/@@download/ENCFF793MDW.bam 48.5 M 0 47.9 M 0.989 PE 100 100 native 21.4 M 0.0 M 20.5 M 0.846 0.96 0.96 24.44 210 1.13 2.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/987a68e9-d7a6-43ca-ab4e-e6b481dc7c78/@@download/cross_correlation_plot/ENCFF223BRRENCFF839NSQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB585GFN michael-snyder:L-2151 "ENCFF839NSQ,ENCFF223BRR" HiSeq 2000 2016-10-09T17:13:53.894341+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kG00jv1zBYbxYJ5zzyyg ENCSR230PTV https://www.encodeproject.org/experiments/ENCSR230PTV transcription factor ZBTB2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF555QMG https://www.encodeproject.org/files/ENCFF555QMG/@@download/ENCFF555QMG.bam ENCFF273SUG https://www.encodeproject.org/files/ENCFF273SUG/@@download/ENCFF273SUG.bam 61.4 M 0 60.5 M 0.987 PE 100 100 native 26.7 M 0.0 M 25.7 M 0.837 0.96 0.96 25.81 210 1.10 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd38b632-ff5e-49d0-8fbc-406df57bd07e/@@download/cross_correlation_plot/ENCFF796XXQENCFF920GKJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB314ILV michael-snyder:L-2152 "ENCFF920GKJ,ENCFF796XXQ" HiSeq 2000 2016-10-09T17:13:10.745804+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kJQ0jv1xPyfX78Yz4gQf ENCSR876GXA https://www.encodeproject.org/experiments/ENCSR876GXA transcription factor ZBTB33-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF226IAA https://www.encodeproject.org/files/ENCFF226IAA/@@download/ENCFF226IAA.bam ENCFF775SSR https://www.encodeproject.org/files/ENCFF775SSR/@@download/ENCFF775SSR.bam 51.8 M 0 50.7 M 0.980 PE 100 100 native 22.1 M 0.0 M 20.5 M 0.791 0.93 0.93 13.92 215 1.22 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/f612ba30-baf4-4934-9cb7-f3cda4b0ecd3/@@download/cross_correlation_plot/ENCFF332XKOENCFF189UUN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB005VWE michael-snyder:L-1764 "ENCFF189UUN,ENCFF332XKO" HiSeq 2000 2016-10-09T17:08:30.079591+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69k80jv1Y68V4KG8yz395 ENCSR876GXA https://www.encodeproject.org/experiments/ENCSR876GXA transcription factor ZBTB33-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF632WSK https://www.encodeproject.org/files/ENCFF632WSK/@@download/ENCFF632WSK.bam ENCFF073OVL https://www.encodeproject.org/files/ENCFF073OVL/@@download/ENCFF073OVL.bam 43.5 M 0 42.5 M 0.978 PE 100 100 native 18.1 M 0.0 M 17.6 M 0.808 0.97 0.97 38.79 225 1.35 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/797f0137-e6e2-4367-940d-acf2259139f9/@@download/cross_correlation_plot/ENCFF094FKHENCFF968SHS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB699RIE michael-snyder:L-1765 "ENCFF968SHS,ENCFF094FKH" HiSeq 2000 2016-10-09T17:07:42.014994+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69qQ0jv1bJQB62j8VV6Pq ENCSR237VLT https://www.encodeproject.org/experiments/ENCSR237VLT transcription factor ZBTB40-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF873BRB https://www.encodeproject.org/files/ENCFF873BRB/@@download/ENCFF873BRB.bam ENCFF789ZEC https://www.encodeproject.org/files/ENCFF789ZEC/@@download/ENCFF789ZEC.bam 50.3 M 0 49.7 M 0.988 PE 100 100 native 22.1 M 0.0 M 21.2 M 0.841 0.96 0.96 23.35 230 2.08 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/1257b88e-aab5-4cd9-b3fa-3401e93e839b/@@download/cross_correlation_plot/ENCFF673KNXENCFF297TMP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB215DSK michael-snyder:L-264 "ENCFF673KNX,ENCFF297TMP" HiSeq 2000 2016-10-09T17:02:26.769663+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4G5Q0jv1xPyfX78Yz4j6f ENCSR237VLT https://www.encodeproject.org/experiments/ENCSR237VLT transcription factor ZBTB40-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF149LTH https://www.encodeproject.org/files/ENCFF149LTH/@@download/ENCFF149LTH.bam ENCFF775MLD https://www.encodeproject.org/files/ENCFF775MLD/@@download/ENCFF775MLD.bam 68.2 M 0 66.9 M 0.981 PE 100 100 native 28.8 M 0.0 M 26.7 M 0.783 0.93 0.93 13.67 200 1.73 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1e9aea7-dd2f-47d3-917d-7f8f4b4bfaac/@@download/cross_correlation_plot/ENCFF520UHFENCFF687MII.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB908SMN michael-snyder:L-265 "ENCFF520UHF,ENCFF687MII" HiSeq 2000 2016-10-09T17:04:21.227501+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4G700jv1QxJBfj5Zb2pyf ENCSR389PWB https://www.encodeproject.org/experiments/ENCSR389PWB transcription factor ZBTB5-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF731WSZ https://www.encodeproject.org/files/ENCFF731WSZ/@@download/ENCFF731WSZ.bam ENCFF189DCP https://www.encodeproject.org/files/ENCFF189DCP/@@download/ENCFF189DCP.bam 68.6 M 0 67.3 M 0.981 PE 100 100 native 29.6 M 0.0 M 29.2 M 0.850 0.99 0.99 70.50 195 1.07 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/32d559d7-2b7f-4aa1-860c-a9faf73a43d0/@@download/cross_correlation_plot/ENCFF845NICENCFF428KVQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB275UYF michael-snyder:L-2641 "ENCFF845NIC,ENCFF428KVQ" HiSeq 2000 2016-10-09T17:06:48.672490+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48X00jv1xPyfX78Yz4j3V ENCSR389PWB https://www.encodeproject.org/experiments/ENCSR389PWB transcription factor ZBTB5-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF066FOE https://www.encodeproject.org/files/ENCFF066FOE/@@download/ENCFF066FOE.bam ENCFF912XZY https://www.encodeproject.org/files/ENCFF912XZY/@@download/ENCFF912XZY.bam 60.7 M 0 59.3 M 0.977 PE 100 100 native 25.9 M 0.0 M 25.5 M 0.840 0.98 0.98 61.44 190 1.07 3.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/f336f4e5-d0b3-45e5-a81f-616937532290/@@download/cross_correlation_plot/ENCFF813FAXENCFF637DCS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB091OYE michael-snyder:L-2642 "ENCFF813FAX,ENCFF637DCS" HiSeq 2000 2016-10-09T17:05:26.319210+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48YQ0jv1QxJBfj5Zb2pp4 ENCSR786OQY https://www.encodeproject.org/experiments/ENCSR786OQY transcription factor ZBTB5-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF872TUO https://www.encodeproject.org/files/ENCFF872TUO/@@download/ENCFF872TUO.bam ENCFF248KAG https://www.encodeproject.org/files/ENCFF248KAG/@@download/ENCFF248KAG.bam 64.4 M 0 61.4 M 0.953 PE 100 100 native 25.8 M 0.0 M 23.4 M 0.728 0.91 0.91 10.61 200 1.08 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/b041bd8f-43af-4ec0-9273-48e7415d1b1c/@@download/cross_correlation_plot/ENCFF865YPRENCFF543AIK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB902XHD michael-snyder:L-2234 "ENCFF543AIK,ENCFF865YPR" HiSeq 2000 2016-10-09T17:06:38.373111+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6K600jv1g5yGjfvVx0PVb ENCSR786OQY https://www.encodeproject.org/experiments/ENCSR786OQY transcription factor ZBTB5-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF329MCT https://www.encodeproject.org/files/ENCFF329MCT/@@download/ENCFF329MCT.bam ENCFF934QDZ https://www.encodeproject.org/files/ENCFF934QDZ/@@download/ENCFF934QDZ.bam 53.4 M 0 52.3 M 0.979 PE 100 100 native 23.0 M 0.0 M 22.6 M 0.846 0.99 0.99 67.29 200 1.09 2.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/4eb1d148-817f-443d-a322-bd57b2863478/@@download/cross_correlation_plot/ENCFF730YIKENCFF861REO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB567SCE michael-snyder:L-2281 "ENCFF861REO,ENCFF730YIK" HiSeq 2000 2016-10-09T17:05:51.389373+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6K800jv1f60PxyZ9JGPgb ENCSR000EFR https://www.encodeproject.org/experiments/ENCSR000EFR "RNA binding protein,transcription factor" ZC3H11A-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF718SZZ https://www.encodeproject.org/files/ENCFF718SZZ/@@download/ENCFF718SZZ.bam ENCFF235TXF https://www.encodeproject.org/files/ENCFF235TXF/@@download/ENCFF235TXF.bam 31.2 M 0 30.5 M 0.977 SE 36 36 native 0.0 M 23.2 M 22.1 M 0.708 0.95 0.95 21.90 100 1.02 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/9398705e-2081-4dce-99bc-69bc794575d3/@@download/cross_correlation_plot/ENCFF000ZDS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKV ENCFF000ZDS Illumina Genome Analyzer 2016-12-11T04:06:21.018864+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1652200369KbxV61z4GFvVj ENCSR000EFR https://www.encodeproject.org/experiments/ENCSR000EFR "RNA binding protein,transcription factor" ZC3H11A-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF161ZFC https://www.encodeproject.org/files/ENCFF161ZFC/@@download/ENCFF161ZFC.bam ENCFF537UFC https://www.encodeproject.org/files/ENCFF537UFC/@@download/ENCFF537UFC.bam 24.9 M 0 23.6 M 0.950 SE 36 36 native 0.0 M 18.1 M 17.4 M 0.700 0.97 0.97 28.77 95 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/d11c8e09-add3-458c-a8b8-14f3b8508331/@@download/cross_correlation_plot/ENCFF000ZDU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKW ENCFF000ZDU Illumina Genome Analyzer 2016-12-11T04:02:00.730956+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16526j03697yz601ypVJ3Xv ENCSR143CEO https://www.encodeproject.org/experiments/ENCSR143CEO RNA binding protein ZC3H8-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF009UWA https://www.encodeproject.org/files/ENCFF009UWA/@@download/ENCFF009UWA.bam ENCFF706VFX https://www.encodeproject.org/files/ENCFF706VFX/@@download/ENCFF706VFX.bam 51.0 M 0 50.2 M 0.984 PE 100 100 native 22.2 M 0.0 M 20.0 M 0.785 0.90 0.90 10.11 195 1.10 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f90b1a4-3d74-4bbb-979d-1b86847cbce0/@@download/cross_correlation_plot/ENCFF031OAXENCFF901OGE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB393QPV michael-snyder:L-2159 "ENCFF901OGE,ENCFF031OAX" HiSeq 2000 2016-10-09T17:05:20.389371+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47PQ0jv1XYYX2Fxk3f55x ENCSR143CEO https://www.encodeproject.org/experiments/ENCSR143CEO RNA binding protein ZC3H8-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF766PNT https://www.encodeproject.org/files/ENCFF766PNT/@@download/ENCFF766PNT.bam ENCFF564IZS https://www.encodeproject.org/files/ENCFF564IZS/@@download/ENCFF564IZS.bam 54.6 M 0 53.7 M 0.983 PE 100 100 native 23.7 M 0.0 M 21.9 M 0.804 0.93 0.92 13.21 190 1.09 3.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/82623cf6-fdcc-4c91-8e65-1333b7c6c42f/@@download/cross_correlation_plot/ENCFF832AWUENCFF354CCL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB049SKA michael-snyder:L-2160 "ENCFF354CCL,ENCFF832AWU" HiSeq 2000 2016-10-09T17:06:32.113454+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47V00jv1f60PxyZ9JGP71 ENCSR322CFO https://www.encodeproject.org/experiments/ENCSR322CFO transcription factor ZEB2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF500YYZ https://www.encodeproject.org/files/ENCFF500YYZ/@@download/ENCFF500YYZ.bam ENCFF682MBJ https://www.encodeproject.org/files/ENCFF682MBJ/@@download/ENCFF682MBJ.bam 55.7 M 0 54.8 M 0.985 PE 100 100 native 24.2 M 0.0 M 22.1 M 0.795 0.93 0.93 14.86 210 1.12 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ec90a00-5b01-47e7-9f8f-cf3ae6f5af72/@@download/cross_correlation_plot/ENCFF845FIVENCFF349FIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB572FFJ michael-snyder:L-236 "ENCFF349FIQ,ENCFF845FIV" HiSeq 2000 2016-10-09T17:13:22.123800+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qb00jv1vY92b0GYjVFYb ENCSR322CFO https://www.encodeproject.org/experiments/ENCSR322CFO transcription factor ZEB2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF717OYW https://www.encodeproject.org/files/ENCFF717OYW/@@download/ENCFF717OYW.bam ENCFF924RVG https://www.encodeproject.org/files/ENCFF924RVG/@@download/ENCFF924RVG.bam 66.5 M 0 65.3 M 0.983 PE 100 100 native 28.4 M 0.0 M 25.4 M 0.765 0.91 0.91 10.87 200 1.13 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a171781-c97e-4455-9b05-7b20e61c5f54/@@download/cross_correlation_plot/ENCFF776VECENCFF824ADC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB962QOX michael-snyder:L-238 "ENCFF776VEC,ENCFF824ADC" HiSeq 2000 2016-10-09T17:14:40.986552+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qfj0jv1XvFGkBjjfjQ12 ENCSR776CYN https://www.encodeproject.org/experiments/ENCSR776CYN "RNA binding protein,transcription factor" ZFP36-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF200KSU https://www.encodeproject.org/files/ENCFF200KSU/@@download/ENCFF200KSU.bam ENCFF866SCT https://www.encodeproject.org/files/ENCFF866SCT/@@download/ENCFF866SCT.bam 30.6 M 0 28.9 M 0.944 SE 36 36 native 0.0 M 22.1 M 21.3 M 0.695 0.97 0.97 33.79 105 1.15 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fd96ddf-de1a-4701-8e8c-332b09843520/@@download/cross_correlation_plot/ENCFF002EWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB824DZN michael-snyder:ZFP36_T5327_K562_Rep1 ENCFF002EWV Illumina Genome Analyzer IIx 2016-10-09T17:33:38.359020+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Yz00jv1g5yGjfvVx0PK5 ENCSR776CYN https://www.encodeproject.org/experiments/ENCSR776CYN "RNA binding protein,transcription factor" ZFP36-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF444QTA https://www.encodeproject.org/files/ENCFF444QTA/@@download/ENCFF444QTA.bam ENCFF091NTA https://www.encodeproject.org/files/ENCFF091NTA/@@download/ENCFF091NTA.bam 22.1 M 0 21.1 M 0.956 SE 36 36 native 0.0 M 16.4 M 15.7 M 0.708 0.95 0.96 30.12 95 1.37 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/df7fc46b-3e3f-447d-9438-d7a9dddd2c0a/@@download/cross_correlation_plot/ENCFF002EWM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB335PLH michael-snyder:ZFP36_T5327_K562_Rep2 ENCFF002EWM Illumina Genome Analyzer IIx 2016-10-09T17:33:28.386002+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Z0Q0jv1XvFGkBjjfjQv2 ENCSR557RVF https://www.encodeproject.org/experiments/ENCSR557RVF transcription factor ZHX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF723QZO https://www.encodeproject.org/files/ENCFF723QZO/@@download/ENCFF723QZO.bam ENCFF373KYE https://www.encodeproject.org/files/ENCFF373KYE/@@download/ENCFF373KYE.bam 29.8 M 0 27.1 M 0.910 SE 36 36 native 0.0 M 20.5 M 19.6 M 0.657 0.96 0.96 22.17 110 1.03 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/51a018ed-cb5a-4a6c-b66b-9ae81d290b00/@@download/cross_correlation_plot/ENCFF002EES.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB028HUL michael-snyder:ZHX1_NB600-244A_K562_Rep1 ENCFF002EES Illumina Genome Analyzer IIx 2016-10-09T17:09:39.867600+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3x780jv1g5yGjfvVx0Kky ENCSR557RVF https://www.encodeproject.org/experiments/ENCSR557RVF transcription factor ZHX1-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF019PLG https://www.encodeproject.org/files/ENCFF019PLG/@@download/ENCFF019PLG.bam ENCFF573IUA https://www.encodeproject.org/files/ENCFF573IUA/@@download/ENCFF573IUA.bam 32.3 M 0 31.7 M 0.981 SE 36 36 native 0.0 M 24.3 M 23.4 M 0.723 0.96 0.96 27.72 95 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/07b0e1b7-0f15-4ef9-9dff-dbf3e5c4af77/@@download/cross_correlation_plot/ENCFF002EET.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB288VUN michael-snyder:ZHX1_NB600-244A_K562_Rep3 ENCFF002EET Illumina Genome Analyzer IIx 2016-10-09T17:09:47.505730+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3x8j0jv1xPyfX78Yz4gZp ENCSR882ERE https://www.encodeproject.org/experiments/ENCSR882ERE transcription factor ZKSCAN1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF071KOM https://www.encodeproject.org/files/ENCFF071KOM/@@download/ENCFF071KOM.bam ENCFF752RHL https://www.encodeproject.org/files/ENCFF752RHL/@@download/ENCFF752RHL.bam 24.1 M 0 23.7 M 0.981 SE 36 36 native 0.0 M 18.1 M 17.5 M 0.725 0.97 0.97 37.02 110 1.12 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/6a21f2f7-18ab-4b8d-bd5b-eadc1a8c3c32/@@download/cross_correlation_plot/ENCFF002EWL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB149OES michael-snyder:ZKSCAN1_HPA006672_K562_Rep1 ENCFF002EWL Illumina Genome Analyzer IIx 2016-10-09T17:00:43.766008+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42580jv1XvFGkBjjfjQ7x ENCSR882ERE https://www.encodeproject.org/experiments/ENCSR882ERE transcription factor ZKSCAN1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF236ZUN https://www.encodeproject.org/files/ENCFF236ZUN/@@download/ENCFF236ZUN.bam ENCFF359UJQ https://www.encodeproject.org/files/ENCFF359UJQ/@@download/ENCFF359UJQ.bam 23.8 M 0 22.8 M 0.957 SE 36 36 native 0.0 M 16.9 M 16.3 M 0.683 0.96 0.96 26.68 105 1.10 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e6bf660-dbe0-4e51-a2a9-ba1f87d2e760/@@download/cross_correlation_plot/ENCFF002EWQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB149FYM michael-snyder:ZKSCAN1_HPA006672_K562_Rep2 ENCFF002EWQ Illumina Genome Analyzer IIx 2016-10-09T17:00:58.144176+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv426j0jv1vY92b0GYjVFp5 ENCSR907JPB https://www.encodeproject.org/experiments/ENCSR907JPB transcription factor ZMIZ1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF417HNM https://www.encodeproject.org/files/ENCFF417HNM/@@download/ENCFF417HNM.bam ENCFF844AWP https://www.encodeproject.org/files/ENCFF844AWP/@@download/ENCFF844AWP.bam 25.3 M 0 23.6 M 0.933 SE 36 36 native 0.0 M 18.3 M 14.5 M 0.573 0.80 0.79 4.51 70 1.09 2.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/19b3f019-23ea-4d09-9354-df2dedc1cfd5/@@download/cross_correlation_plot/ENCFF002EWF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB392IDM michael-snyder:MIZ1_sc-136985_K562_Rep1 ENCFF002EWF Illumina Genome Analyzer IIx 2016-10-09T16:59:20.657444+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FVQ0jv1zBYbxYJ5zzzKZ ENCSR907JPB https://www.encodeproject.org/experiments/ENCSR907JPB transcription factor ZMIZ1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF384WCY https://www.encodeproject.org/files/ENCFF384WCY/@@download/ENCFF384WCY.bam ENCFF577XSW https://www.encodeproject.org/files/ENCFF577XSW/@@download/ENCFF577XSW.bam 30.2 M 0 29.2 M 0.969 SE 36 36 native 0.0 M 22.3 M 19.6 M 0.651 0.88 0.88 8.10 110 1.05 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/325b546f-83d2-499a-8eca-8dbc9d3f64a3/@@download/cross_correlation_plot/ENCFF002EWG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB323UAT michael-snyder:MIZ1_sc-136985_K562_Rep2 ENCFF002EWG Illumina Genome Analyzer IIx 2016-10-09T16:59:28.033921+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FXj0jv1XYYX2Fxk3f5BX ENCSR546IHU https://www.encodeproject.org/experiments/ENCSR546IHU transcription factor ZNF184-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF068UWU https://www.encodeproject.org/files/ENCFF068UWU/@@download/ENCFF068UWU.bam ENCFF354TFR https://www.encodeproject.org/files/ENCFF354TFR/@@download/ENCFF354TFR.bam 74.6 M 0 67.3 M 0.902 PE 100 100 native 28.7 M 0.0 M 27.5 M 0.736 0.96 0.96 23.13 200 1.07 4.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/a578c098-0c47-4bef-ae11-d484158b0f95/@@download/cross_correlation_plot/ENCFF880UNPENCFF264CHQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB801CGH michael-snyder:L-2227 "ENCFF880UNP,ENCFF264CHQ" HiSeq 2000 2016-10-09T17:10:02.530629+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43980jv1XYYX2Fxk3f50B ENCSR546IHU https://www.encodeproject.org/experiments/ENCSR546IHU transcription factor ZNF184-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF648LXV https://www.encodeproject.org/files/ENCFF648LXV/@@download/ENCFF648LXV.bam ENCFF078FTA https://www.encodeproject.org/files/ENCFF078FTA/@@download/ENCFF078FTA.bam 68.3 M 0 61.2 M 0.896 PE 100 100 native 26.1 M 0.0 M 24.8 M 0.725 0.95 0.95 19.72 210 1.09 3.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/60554f97-f806-431f-bea4-3cb9e11ea469/@@download/cross_correlation_plot/ENCFF118URYENCFF082KHS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB252ESN michael-snyder:L-2228 "ENCFF082KHS,ENCFF118URY" HiSeq 2000 2016-10-09T17:05:12.190037+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43F00jv1xPyfX78Yz4gkx ENCSR452WEB https://www.encodeproject.org/experiments/ENCSR452WEB transcription factor ZNF207-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF797PJL https://www.encodeproject.org/files/ENCFF797PJL/@@download/ENCFF797PJL.bam ENCFF749NAU https://www.encodeproject.org/files/ENCFF749NAU/@@download/ENCFF749NAU.bam 66.0 M 0 64.8 M 0.982 PE 100 100 native 28.3 M 0.0 M 27.3 M 0.828 0.97 0.97 31.74 205 1.07 3.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/99885c84-998a-42db-b31e-2da70e156b02/@@download/cross_correlation_plot/ENCFF082VMQENCFF417KWR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB484PGF michael-snyder:L-1699 "ENCFF417KWR,ENCFF082VMQ" HiSeq 2000 2017-05-05T22:27:20.898604+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469y70036911Q6zKVv5090g ENCSR452WEB https://www.encodeproject.org/experiments/ENCSR452WEB transcription factor ZNF207-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF738TZF https://www.encodeproject.org/files/ENCFF738TZF/@@download/ENCFF738TZF.bam ENCFF801JCC https://www.encodeproject.org/files/ENCFF801JCC/@@download/ENCFF801JCC.bam 72.9 M 0 71.5 M 0.980 PE 100 100 native 31.0 M 0.0 M 30.0 M 0.823 0.97 0.97 31.91 200 1.06 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/14f007b9-faa6-4209-99af-1d7865997364/@@download/cross_correlation_plot/ENCFF962QTCENCFF562KAU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB462KNH michael-snyder:L-1703 "ENCFF562KAU,ENCFF962QTC" HiSeq 2000 2017-05-05T23:07:11.850874+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469yF00369KZg6P1gzFxqV3 ENCSR385AHH https://www.encodeproject.org/experiments/ENCSR385AHH transcription factor ZNF24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF786MHJ https://www.encodeproject.org/files/ENCFF786MHJ/@@download/ENCFF786MHJ.bam ENCFF593RXC https://www.encodeproject.org/files/ENCFF593RXC/@@download/ENCFF593RXC.bam 88.7 M 0 87.8 M 0.989 PE 100 100 native 39.3 M 0.0 M 38.3 M 0.863 0.98 0.98 39.96 175 1.11 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/107a9cde-fb4d-437a-a59a-86c7a34fadb5/@@download/cross_correlation_plot/ENCFF931UCZENCFF965QBT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB212UPD michael-snyder:L-105 "ENCFF931UCZ,ENCFF965QBT" HiSeq 2000 2016-10-09T17:17:53.642493+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3y6Q0jv1XYYX2Fxk3f4p9 ENCSR385AHH https://www.encodeproject.org/experiments/ENCSR385AHH transcription factor ZNF24-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF686ZIH https://www.encodeproject.org/files/ENCFF686ZIH/@@download/ENCFF686ZIH.bam ENCFF707ZKL https://www.encodeproject.org/files/ENCFF707ZKL/@@download/ENCFF707ZKL.bam 81.7 M 0 80.0 M 0.979 PE 100 100 native 35.4 M 0.0 M 33.1 M 0.810 0.94 0.94 17.01 180 1.12 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/121b4514-5e39-4190-aaab-d603aa2360d6/@@download/cross_correlation_plot/ENCFF546WQOENCFF294CYY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB778WXY michael-snyder:L-145 "ENCFF546WQO,ENCFF294CYY" HiSeq 2000 2016-10-09T17:17:37.670000+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3y800jv1f60PxyZ9JGKzY ENCSR695EQB https://www.encodeproject.org/experiments/ENCSR695EQB transcription factor ZNF24-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF657TZQ https://www.encodeproject.org/files/ENCFF657TZQ/@@download/ENCFF657TZQ.bam ENCFF953ORJ https://www.encodeproject.org/files/ENCFF953ORJ/@@download/ENCFF953ORJ.bam 75.7 M 0 73.7 M 0.974 PE 100 100 native 31.9 M 0.0 M 30.4 M 0.802 0.95 0.95 20.82 195 1.23 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/20475001-e701-4b0d-a229-e5db3d6cb0b9/@@download/cross_correlation_plot/ENCFF241YMFENCFF941CCE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB385HNK michael-snyder:L-1758 "ENCFF941CCE,ENCFF241YMF" HiSeq 2000 2016-10-09T17:06:33.099230+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48BQ0jv1XYYX2Fxk3f578 ENCSR695EQB https://www.encodeproject.org/experiments/ENCSR695EQB transcription factor ZNF24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF738AVH https://www.encodeproject.org/files/ENCFF738AVH/@@download/ENCFF738AVH.bam ENCFF998BKX https://www.encodeproject.org/files/ENCFF998BKX/@@download/ENCFF998BKX.bam 74.2 M 0 72.7 M 0.980 PE 100 100 native 31.8 M 0.0 M 30.4 M 0.820 0.96 0.96 23.45 200 1.26 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/9df4a602-511b-4e72-9101-54b7d57e1e3c/@@download/cross_correlation_plot/ENCFF292TZEENCFF710ZBC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB952HQO michael-snyder:L-1759 "ENCFF292TZE,ENCFF710ZBC" HiSeq 2000 2016-10-09T17:07:09.128607+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48G00jv1g5yGjfvVx0P2Z ENCSR742TMU https://www.encodeproject.org/experiments/ENCSR742TMU transcription factor ZNF282-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF584VYO https://www.encodeproject.org/files/ENCFF584VYO/@@download/ENCFF584VYO.bam ENCFF139YNO https://www.encodeproject.org/files/ENCFF139YNO/@@download/ENCFF139YNO.bam 88.0 M 0 85.1 M 0.967 PE 100 100 native 38.0 M 0.0 M 30.3 M 0.689 0.80 0.80 4.79 200 1.07 4.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/43aca352-e84b-40ed-9038-f51b6d787393/@@download/cross_correlation_plot/ENCFF908NRMENCFF222CTH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB365BOC michael-snyder:L-42 "ENCFF908NRM,ENCFF222CTH" HiSeq 2000 2016-10-09T17:16:47.623139+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3j200jv1zBYbxYJ5zzyx8 ENCSR742TMU https://www.encodeproject.org/experiments/ENCSR742TMU transcription factor ZNF282-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF553FEG https://www.encodeproject.org/files/ENCFF553FEG/@@download/ENCFF553FEG.bam ENCFF085YVB https://www.encodeproject.org/files/ENCFF085YVB/@@download/ENCFF085YVB.bam 69.0 M 0 66.0 M 0.956 PE 100 100 native 29.5 M 0.0 M 25.2 M 0.729 0.85 0.85 6.57 205 1.11 3.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/88740682-5e20-4f08-b5a2-11bd2b0bf75d/@@download/cross_correlation_plot/ENCFF899JCNENCFF455ZRR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB311VSR michael-snyder:L-43 "ENCFF455ZRR,ENCFF899JCN" HiSeq 2000 2016-10-09T17:15:54.563981+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3j3j0jv1vY92b0GYjVFPX ENCSR167KBO https://www.encodeproject.org/experiments/ENCSR167KBO transcription factor ZNF316-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF267EEY https://www.encodeproject.org/files/ENCFF267EEY/@@download/ENCFF267EEY.bam ENCFF325LLQ https://www.encodeproject.org/files/ENCFF325LLQ/@@download/ENCFF325LLQ.bam 84.3 M 0 78.1 M 0.927 PE 100 100 native 34.1 M 0.0 M 33.2 M 0.787 0.99 0.99 67.93 210 1.52 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/670ba8d3-fdd9-4866-bd65-a8183348ab1b/@@download/cross_correlation_plot/ENCFF387RWUENCFF107ZQT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB683FVA michael-snyder:L-2225 "ENCFF387RWU,ENCFF107ZQT" HiSeq 2000 2016-10-09T17:10:05.547864+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Ky80jv1g5yGjfvVx0P9Q ENCSR167KBO https://www.encodeproject.org/experiments/ENCSR167KBO transcription factor ZNF316-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF908CYX https://www.encodeproject.org/files/ENCFF908CYX/@@download/ENCFF908CYX.bam ENCFF750YXZ https://www.encodeproject.org/files/ENCFF750YXZ/@@download/ENCFF750YXZ.bam 90.0 M 0 84.7 M 0.941 PE 100 100 native 36.8 M 0.0 M 35.3 M 0.784 0.98 0.98 47.26 215 1.49 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/71e1449d-6ca0-4c35-a377-53577d6b8073/@@download/cross_correlation_plot/ENCFF228VARENCFF739VNU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB825JJI michael-snyder:L-2226 "ENCFF739VNU,ENCFF228VAR" HiSeq 2000 2016-10-09T17:11:26.754340+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Kzj0jv1g5yGjfvVx0P9j ENCSR200JYP https://www.encodeproject.org/experiments/ENCSR200JYP transcription factor ZNF316-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF303ICH https://www.encodeproject.org/files/ENCFF303ICH/@@download/ENCFF303ICH.bam ENCFF480PKB https://www.encodeproject.org/files/ENCFF480PKB/@@download/ENCFF480PKB.bam 72.0 M 0 69.0 M 0.957 PE 100 100 native 29.9 M 0.0 M 23.2 M 0.645 0.78 0.77 4.35 230 1.10 3.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0a24747-7686-478d-8443-c612048ef6be/@@download/cross_correlation_plot/ENCFF121HAMENCFF890FRG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB320WIE michael-snyder:L-2221 "ENCFF890FRG,ENCFF121HAM" HiSeq 4000 2016-10-27T22:29:44.184385+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bZkj0369GJ6xQfbB7F5q8 ENCSR200JYP https://www.encodeproject.org/experiments/ENCSR200JYP transcription factor ZNF316-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF041ZVD https://www.encodeproject.org/files/ENCFF041ZVD/@@download/ENCFF041ZVD.bam ENCFF611FON https://www.encodeproject.org/files/ENCFF611FON/@@download/ENCFF611FON.bam 182.1 M 0 137.2 M 0.753 PE 100 100 native 59.0 M 0.0 M 46.7 M 0.513 0.79 0.79 4.75 210 1.15 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/de192c1b-790b-466c-a62f-848cb1d82832/@@download/cross_correlation_plot/ENCFF308CZXENCFF786NXV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB822CTA michael-snyder:L-2222 "ENCFF786NXV,ENCFF308CZX" HiSeq 4000 2016-10-27T22:35:16.538137+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bZx003694q32PPxBJ6ZxF ENCSR334HSW https://www.encodeproject.org/experiments/ENCSR334HSW transcription factor ZNF318-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF304KSV https://www.encodeproject.org/files/ENCFF304KSV/@@download/ENCFF304KSV.bam ENCFF637TXA https://www.encodeproject.org/files/ENCFF637TXA/@@download/ENCFF637TXA.bam 131.9 M 0 127.9 M 0.969 PE 100 100 native 55.3 M 0.0 M 29.5 M 0.448 0.54 0.54 2.15 225 1.06 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/3712ea69-2289-4893-9028-ad23b52d7286/@@download/cross_correlation_plot/ENCFF610TGHENCFF976NWF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB421OCV michael-snyder:L-2010 "ENCFF610TGH,ENCFF976NWF" HiSeq 4000 2016-09-16T03:24:15.283969+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZ6j03690qG5Zzk84B8X8 ENCSR334HSW https://www.encodeproject.org/experiments/ENCSR334HSW transcription factor ZNF318-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF373YTD https://www.encodeproject.org/files/ENCFF373YTD/@@download/ENCFF373YTD.bam ENCFF897DYL https://www.encodeproject.org/files/ENCFF897DYL/@@download/ENCFF897DYL.bam 108.9 M 0 104.9 M 0.964 PE 100 100 native 45.7 M 0.0 M 34.7 M 0.638 0.76 0.76 4.07 210 1.05 3.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/aec26c0a-0f1e-422d-926d-b9f7863f828b/@@download/cross_correlation_plot/ENCFF187NIJENCFF252HPP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB294QSB michael-snyder:L-2011 "ENCFF187NIJ,ENCFF252HPP" HiSeq 4000 2016-09-16T03:21:07.207314+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZ9j03695XjQpy58BVxZ0 ENCSR352BJL https://www.encodeproject.org/experiments/ENCSR352BJL transcription factor ZNF318-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF019RWB https://www.encodeproject.org/files/ENCFF019RWB/@@download/ENCFF019RWB.bam ENCFF616JGV https://www.encodeproject.org/files/ENCFF616JGV/@@download/ENCFF616JGV.bam 33.3 M 0 32.9 M 0.986 PE 100 100 native 14.6 M 0.0 M 12.7 M 0.762 0.87 0.87 7.77 220 1.13 3.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/536a0a08-5d14-4066-a08d-940d35686a07/@@download/cross_correlation_plot/ENCFF370TGNENCFF328DHW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB268TBX michael-snyder:L-2008 "ENCFF328DHW,ENCFF370TGN" HiSeq 2000 2016-10-09T17:09:19.745761+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k7j0jv1zBYbxYJ5zzyyJ ENCSR352BJL https://www.encodeproject.org/experiments/ENCSR352BJL transcription factor ZNF318-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF353EFN https://www.encodeproject.org/files/ENCFF353EFN/@@download/ENCFF353EFN.bam ENCFF696EGT https://www.encodeproject.org/files/ENCFF696EGT/@@download/ENCFF696EGT.bam 43.7 M 0 43.1 M 0.986 PE 100 100 native 19.1 M 0.0 M 17.5 M 0.804 0.92 0.92 12.53 220 1.10 3.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6c99df9-a5dd-4d98-8140-9d9dca2dfed9/@@download/cross_correlation_plot/ENCFF186WPXENCFF165TPB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB371YXR michael-snyder:L-2009 "ENCFF186WPX,ENCFF165TPB" HiSeq 2000 2016-10-09T17:10:19.745208+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k9Q0jv1vY92b0GYjVFVY ENCSR000EFP https://www.encodeproject.org/experiments/ENCSR000EFP transcription factor ZNF384-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF140ZMN https://www.encodeproject.org/files/ENCFF140ZMN/@@download/ENCFF140ZMN.bam ENCFF576HJC https://www.encodeproject.org/files/ENCFF576HJC/@@download/ENCFF576HJC.bam 25.1 M 0 24.4 M 0.969 SE 36 36 native 0.0 M 18.0 M 17.3 M 0.689 0.96 0.97 32.03 90 1.17 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a39e975-d2a2-4c45-8b43-b835419140b6/@@download/cross_correlation_plot/ENCFF000ZFB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKB ENCFF000ZFB Illumina Genome Analyzer 2016-12-11T01:35:42.515451+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163fGQ03695Kj1j8qPQgkXf ENCSR000EFP https://www.encodeproject.org/experiments/ENCSR000EFP transcription factor ZNF384-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF171VBC https://www.encodeproject.org/files/ENCFF171VBC/@@download/ENCFF171VBC.bam ENCFF920KZH https://www.encodeproject.org/files/ENCFF920KZH/@@download/ENCFF920KZH.bam 23.5 M 0 22.9 M 0.973 SE 36 36 native 0.0 M 17.0 M 16.4 M 0.698 0.97 0.97 36.78 100 1.24 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1881b0c-10c7-4954-b94a-bc3cba6a9a05/@@download/cross_correlation_plot/ENCFF000ZFD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABK ENCFF000ZFD Illumina Genome Analyzer 2016-12-11T01:51:12.018406+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163fV80369F4yf5544b19G9 ENCSR439OCL https://www.encodeproject.org/experiments/ENCSR439OCL transcription factor ZNF407-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF410WYJ https://www.encodeproject.org/files/ENCFF410WYJ/@@download/ENCFF410WYJ.bam ENCFF655NYQ https://www.encodeproject.org/files/ENCFF655NYQ/@@download/ENCFF655NYQ.bam 57.9 M 0 55.6 M 0.961 PE 100 100 native 24.2 M 0.0 M 22.2 M 0.767 0.92 0.92 12.01 230 1.25 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a259243-97dc-41c4-bde7-689064cf1b74/@@download/cross_correlation_plot/ENCFF645KUFENCFF065DPP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB968LBD michael-snyder:L-2229 "ENCFF645KUF,ENCFF065DPP" HiSeq 2000 2016-10-09T17:41:20.705267+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5jk80jv1VK5GXJx08X4V8 ENCSR439OCL https://www.encodeproject.org/experiments/ENCSR439OCL transcription factor ZNF407-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF951IVR https://www.encodeproject.org/files/ENCFF951IVR/@@download/ENCFF951IVR.bam ENCFF413DVA https://www.encodeproject.org/files/ENCFF413DVA/@@download/ENCFF413DVA.bam 48.7 M 0 46.5 M 0.954 PE 100 100 native 20.3 M 0.0 M 17.8 M 0.733 0.88 0.88 8.01 230 1.28 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3ea67d4-0373-4b3d-80fb-c714f330895e/@@download/cross_correlation_plot/ENCFF202KVAENCFF235SEI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB523DLK michael-snyder:L-2230 "ENCFF235SEI,ENCFF202KVA" HiSeq 2000 2016-10-09T17:37:09.605848+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5jqQ0jv1kK69v90ZyPZVq ENCSR249BHQ https://www.encodeproject.org/experiments/ENCSR249BHQ transcription factor ZNF592-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF119ZDI https://www.encodeproject.org/files/ENCFF119ZDI/@@download/ENCFF119ZDI.bam ENCFF414QKE https://www.encodeproject.org/files/ENCFF414QKE/@@download/ENCFF414QKE.bam 87.2 M 0 86.0 M 0.986 PE 100 100 native 38.1 M 0.0 M 33.0 M 0.756 0.87 0.86 7.25 180 1.12 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee9a9ec0-eeda-464d-9a44-29fcc3d47d32/@@download/cross_correlation_plot/ENCFF283GNMENCFF451RCX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB939TSV michael-snyder:L-3394 "ENCFF451RCX,ENCFF283GNM" HiSeq 4000 2017-04-19T10:54:44.727884+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q80XQ0369Pq0zYPpqJvbPg ENCSR249BHQ https://www.encodeproject.org/experiments/ENCSR249BHQ transcription factor ZNF592-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF437IVZ https://www.encodeproject.org/files/ENCFF437IVZ/@@download/ENCFF437IVZ.bam ENCFF323QDU https://www.encodeproject.org/files/ENCFF323QDU/@@download/ENCFF323QDU.bam 78.8 M 0 77.4 M 0.983 PE 100 100 native 33.9 M 0.0 M 28.9 M 0.734 0.85 0.85 6.67 195 1.16 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d08153a-af77-445d-88a5-869b02b492bf/@@download/cross_correlation_plot/ENCFF706KLPENCFF669OSV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB291MXB michael-snyder:L-3395 "ENCFF669OSV,ENCFF706KLP" HiSeq 4000 2017-04-19T10:54:43.592441+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q80x803692qXj74GK1Gvbg ENCSR566JDT https://www.encodeproject.org/experiments/ENCSR566JDT transcription factor ZNF592-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF536DXM https://www.encodeproject.org/files/ENCFF536DXM/@@download/ENCFF536DXM.bam ENCFF888BHC https://www.encodeproject.org/files/ENCFF888BHC/@@download/ENCFF888BHC.bam 77.3 M 0 76.3 M 0.987 PE 100 100 native 33.3 M 0.0 M 30.9 M 0.800 0.93 0.93 13.69 180 1.07 6.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/d746b3e6-c88b-45f6-96ad-fddeb1f7c143/@@download/cross_correlation_plot/ENCFF445LKTENCFF929VLY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB659HCJ michael-snyder:L-3405 "ENCFF445LKT,ENCFF929VLY" HiSeq 4000 2017-04-19T10:54:14.749162+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q7vPQ0369B30JzPPqz8xP8 ENCSR566JDT https://www.encodeproject.org/experiments/ENCSR566JDT transcription factor ZNF592-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF830ISI https://www.encodeproject.org/files/ENCFF830ISI/@@download/ENCFF830ISI.bam ENCFF021OJK https://www.encodeproject.org/files/ENCFF021OJK/@@download/ENCFF021OJK.bam 91.7 M 0 90.1 M 0.983 PE 100 100 native 39.3 M 0.0 M 33.6 M 0.733 0.86 0.85 6.76 170 1.08 2.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2bf00bf-f054-4973-860a-1cb78b163776/@@download/cross_correlation_plot/ENCFF878JANENCFF943XNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB482VZS michael-snyder:L-3407 "ENCFF878JAN,ENCFF943XNE" HiSeq 4000 2017-04-19T10:55:15.735413+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q7vbj03692362PBZ95x08b ENCSR497VFH https://www.encodeproject.org/experiments/ENCSR497VFH transcription factor ZNF639-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF411KAB https://www.encodeproject.org/files/ENCFF411KAB/@@download/ENCFF411KAB.bam ENCFF682PQT https://www.encodeproject.org/files/ENCFF682PQT/@@download/ENCFF682PQT.bam 50.5 M 0 48.2 M 0.955 PE 100 100 native 21.1 M 0.0 M 19.3 M 0.763 0.91 0.91 11.14 215 1.07 3.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfcaf424-ce89-4aed-b69d-8fda047b5188/@@download/cross_correlation_plot/ENCFF300NMVENCFF187CTD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB685IPG michael-snyder:L-2219 "ENCFF187CTD,ENCFF300NMV" HiSeq 2000 2016-10-09T17:13:31.353163+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gp00jv1zBYbxYJ5zzyvq ENCSR497VFH https://www.encodeproject.org/experiments/ENCSR497VFH transcription factor ZNF639-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF240BDN https://www.encodeproject.org/files/ENCFF240BDN/@@download/ENCFF240BDN.bam ENCFF830YWS https://www.encodeproject.org/files/ENCFF830YWS/@@download/ENCFF830YWS.bam 58.5 M 0 54.3 M 0.929 PE 100 100 native 23.6 M 0.0 M 22.5 M 0.769 0.95 0.95 21.17 210 1.08 3.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/844d9500-14ce-42af-8497-c69999f336c5/@@download/cross_correlation_plot/ENCFF124FJOENCFF497YJP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB610WMP michael-snyder:L-2220 "ENCFF497YJP,ENCFF124FJO" HiSeq 2000 2016-10-09T17:12:26.267355+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gq80jv1QxJBfj5Zb2pG6 ENCSR411KGI https://www.encodeproject.org/experiments/ENCSR411KGI transcription factor ZNF687-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF059TEW https://www.encodeproject.org/files/ENCFF059TEW/@@download/ENCFF059TEW.bam ENCFF024MOY https://www.encodeproject.org/files/ENCFF024MOY/@@download/ENCFF024MOY.bam 97.1 M 0 95.6 M 0.985 PE 100 100 native 41.8 M 0.0 M 37.9 M 0.781 0.91 0.91 10.67 170 1.06 3.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/bccb5411-3c6e-436b-a5e9-48c53b780505/@@download/cross_correlation_plot/ENCFF107GKGENCFF983LKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB648ICX michael-snyder:L-3408 "ENCFF983LKZ,ENCFF107GKG" HiSeq 4000 2017-04-19T10:56:00.983635+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q85b803696XFbgBYVz5bv4 ENCSR411KGI https://www.encodeproject.org/experiments/ENCSR411KGI transcription factor ZNF687-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF901DDD https://www.encodeproject.org/files/ENCFF901DDD/@@download/ENCFF901DDD.bam ENCFF568QFM https://www.encodeproject.org/files/ENCFF568QFM/@@download/ENCFF568QFM.bam 89.1 M 0 87.3 M 0.980 PE 100 100 native 38.5 M 0.0 M 33.6 M 0.753 0.87 0.87 7.71 160 1.09 2.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/37d585db-ed98-440e-8628-35af11ac04d6/@@download/cross_correlation_plot/ENCFF981IQIENCFF587IZC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB965JBP michael-snyder:L-3409 "ENCFF981IQI,ENCFF587IZC" HiSeq 4000 2017-04-19T10:54:35.539206+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q85qj03696XFbgBYVz5bvP ENCSR033NQK https://www.encodeproject.org/experiments/ENCSR033NQK transcription factor ZNF830-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF239JHG https://www.encodeproject.org/files/ENCFF239JHG/@@download/ENCFF239JHG.bam ENCFF498FBX https://www.encodeproject.org/files/ENCFF498FBX/@@download/ENCFF498FBX.bam 104.7 M 0 100.3 M 0.958 PE 100 100 native 43.3 M 0.0 M 27.5 M 0.526 0.64 0.64 2.75 230 1.07 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/e785aa5b-91da-4b37-958e-d2efdfebabe8/@@download/cross_correlation_plot/ENCFF415BMNENCFF073TIY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB504KOE michael-snyder:L-2006 "ENCFF073TIY,ENCFF415BMN" HiSeq 4000 2016-09-16T03:21:04.113626+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyfP80369BvpJbQkBjPZP1 ENCSR033NQK https://www.encodeproject.org/experiments/ENCSR033NQK transcription factor ZNF830-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF181NHZ https://www.encodeproject.org/files/ENCFF181NHZ/@@download/ENCFF181NHZ.bam ENCFF873PDP https://www.encodeproject.org/files/ENCFF873PDP/@@download/ENCFF873PDP.bam 114.6 M 0 111.1 M 0.969 PE 100 100 native 48.0 M 0.0 M 36.5 M 0.637 0.76 0.76 4.08 215 1.06 2.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/c878e58d-7eca-43f3-bb7a-73de8932bfc6/@@download/cross_correlation_plot/ENCFF556XCJENCFF886VXN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB231DNX michael-snyder:L-2007 "ENCFF886VXN,ENCFF556XCJ" HiSeq 4000 2016-09-16T03:22:51.022266+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyfX003696x9VJV48y49xj ENCSR851XLW https://www.encodeproject.org/experiments/ENCSR851XLW transcription factor ZNF830-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF470CJT https://www.encodeproject.org/files/ENCFF470CJT/@@download/ENCFF470CJT.bam ENCFF987QNU https://www.encodeproject.org/files/ENCFF987QNU/@@download/ENCFF987QNU.bam 137.8 M 0 109.2 M 0.793 PE 100 100 native 47.7 M 0.0 M 27.6 M 0.401 0.58 0.58 2.38 240 1.05 4.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/2193921b-efd4-4cff-8cfc-a3e7b7bcb5d5/@@download/cross_correlation_plot/ENCFF340GSUENCFF167GOB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB166JDU michael-snyder:L-2019 "ENCFF167GOB,ENCFF340GSU" HiSeq 4000 2016-09-16T03:21:35.740368+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyz58036954vKPp0b3gGXv ENCSR851XLW https://www.encodeproject.org/experiments/ENCSR851XLW transcription factor ZNF830-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF866BCZ https://www.encodeproject.org/files/ENCFF866BCZ/@@download/ENCFF866BCZ.bam ENCFF169MTD https://www.encodeproject.org/files/ENCFF169MTD/@@download/ENCFF169MTD.bam 134.8 M 0 115.1 M 0.854 PE 100 100 native 50.1 M 0.0 M 39.0 M 0.579 0.78 0.78 4.40 245 1.04 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce8c2e6f-36f7-477f-bdea-be40e6a61815/@@download/cross_correlation_plot/ENCFF502MLYENCFF921RGY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB757HCL michael-snyder:L-2020 "ENCFF502MLY,ENCFF921RGY" HiSeq 4000 2016-09-16T03:23:40.185254+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyz900369GZQjPPJb6P0pK ENCSR175SZH https://www.encodeproject.org/experiments/ENCSR175SZH transcription factor ZSCAN29-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF122RSM https://www.encodeproject.org/files/ENCFF122RSM/@@download/ENCFF122RSM.bam ENCFF527NNL https://www.encodeproject.org/files/ENCFF527NNL/@@download/ENCFF527NNL.bam 47.8 M 0 47.0 M 0.983 PE 100 100 native 20.6 M 0.0 M 19.0 M 0.796 0.92 0.92 12.52 225 1.13 2.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/80c9732b-fe4d-49c3-9067-a7b36cec7a0f/@@download/cross_correlation_plot/ENCFF959OBEENCFF846BUV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB425FBF michael-snyder:L-2103 "ENCFF959OBE,ENCFF846BUV" HiSeq 2000 2016-10-09T17:02:13.316330+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46YQ0jv1XvFGkBjjfjQJV ENCSR175SZH https://www.encodeproject.org/experiments/ENCSR175SZH transcription factor ZSCAN29-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF450TNG https://www.encodeproject.org/files/ENCFF450TNG/@@download/ENCFF450TNG.bam ENCFF685DTH https://www.encodeproject.org/files/ENCFF685DTH/@@download/ENCFF685DTH.bam 49.4 M 0 48.2 M 0.977 PE 100 100 native 21.3 M 0.0 M 19.5 M 0.791 0.92 0.92 11.65 215 1.19 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd39dd23-f315-4064-b920-249ee8c5f53b/@@download/cross_correlation_plot/ENCFF368UTNENCFF025FSC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB217HKQ michael-snyder:L-2104 "ENCFF025FSC,ENCFF368UTN" HiSeq 2000 2016-10-09T17:02:01.783242+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46b00jv1f60PxyZ9JGP60 ENCSR635EXI https://www.encodeproject.org/experiments/ENCSR635EXI transcription factor ZSCAN29-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR780BBJ https://www.encodeproject.org/experiments/ENCSR780BBJ transcription factor ZZZ3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF566EXS https://www.encodeproject.org/files/ENCFF566EXS/@@download/ENCFF566EXS.bam ENCFF653MWT https://www.encodeproject.org/files/ENCFF653MWT/@@download/ENCFF653MWT.bam 108.4 M 0 99.0 M 0.913 PE 100 100 native 43.1 M 0.0 M 33.5 M 0.617 0.78 0.78 4.39 235 1.06 3.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e170db7-2489-479c-af3d-7d6f475f98a2/@@download/cross_correlation_plot/ENCFF960PELENCFF491EOP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB662OQQ michael-snyder:L-2241 "ENCFF491EOP,ENCFF960PEL" HiSeq 4000 2016-09-16T03:20:19.435335+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyq900369JzPBF2JXk4PX2 ENCSR780BBJ https://www.encodeproject.org/experiments/ENCSR780BBJ transcription factor ZZZ3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF548YYR https://www.encodeproject.org/files/ENCFF548YYR/@@download/ENCFF548YYR.bam ENCFF520QTI https://www.encodeproject.org/files/ENCFF520QTI/@@download/ENCFF520QTI.bam 61.8 M 0 59.8 M 0.968 PE 100 100 native 26.1 M 0.0 M 24.3 M 0.787 0.93 0.93 14.54 220 1.07 3.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/37f615f4-53e0-4219-b7a2-70f8cbf4571d/@@download/cross_correlation_plot/ENCFF233HVBENCFF778PUP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB154WSS michael-snyder:L-2288 "ENCFF233HVB,ENCFF778PUP" HiSeq 4000 2016-09-16T03:17:15.358087+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyqG0036903vFQkJzV6PqQ ENCSR881UOO https://www.encodeproject.org/experiments/ENCSR881UOO transcription factor ATF2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF045IAN https://www.encodeproject.org/files/ENCFF045IAN/@@download/ENCFF045IAN.bam ENCFF157YTE https://www.encodeproject.org/files/ENCFF157YTE/@@download/ENCFF157YTE.bam 39.0 M 0 38.4 M 0.983 PE 100 100 native 17.0 M 0.0 M 14.4 M 0.739 0.85 0.85 6.46 255 1.21 2.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b57ca1d-d083-4ef3-a3d3-fb0f5191d25d/@@download/cross_correlation_plot/ENCFF164ZYBENCFF431EXX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB666XRF michael-snyder:L-1914 "ENCFF164ZYB,ENCFF431EXX" HiSeq 2000 2017-01-26T00:23:32.779816+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB1003695JvXVBgKgJgXQ ENCSR881UOO https://www.encodeproject.org/experiments/ENCSR881UOO transcription factor ATF2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF603DZF https://www.encodeproject.org/files/ENCFF603DZF/@@download/ENCFF603DZF.bam ENCFF105WNL https://www.encodeproject.org/files/ENCFF105WNL/@@download/ENCFF105WNL.bam 51.8 M 0 50.6 M 0.977 PE 100 100 native 22.2 M 0.0 M 21.1 M 0.816 0.95 0.95 20.98 235 1.07 3.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/160d79f4-8564-4bf1-bd67-d6e4028f7ffa/@@download/cross_correlation_plot/ENCFF478QIYENCFF763LUK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB551WDL michael-snyder:L-1915 "ENCFF478QIY,ENCFF763LUK" HiSeq 2000 2017-01-25T23:28:59.446174+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBXQ0369345F196JqzXKK ENCSR866QPZ https://www.encodeproject.org/experiments/ENCSR866QPZ transcription factor ATF7-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF720FQJ https://www.encodeproject.org/files/ENCFF720FQJ/@@download/ENCFF720FQJ.bam ENCFF751CGH https://www.encodeproject.org/files/ENCFF751CGH/@@download/ENCFF751CGH.bam 43.5 M 0 42.2 M 0.971 PE 100 100 native 18.5 M 0.0 M 16.5 M 0.760 0.90 0.89 9.36 245 1.22 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/a78a527f-e69c-40a4-a419-4cd6da84de33/@@download/cross_correlation_plot/ENCFF140LSMENCFF120ALM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB946TFG michael-snyder:L-1744 "ENCFF140LSM,ENCFF120ALM" HiSeq 2000 2017-01-26T00:24:04.897689+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K96j03698k8BZGpKx02xP ENCSR866QPZ https://www.encodeproject.org/experiments/ENCSR866QPZ transcription factor ATF7-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF898MXH https://www.encodeproject.org/files/ENCFF898MXH/@@download/ENCFF898MXH.bam ENCFF885XJT https://www.encodeproject.org/files/ENCFF885XJT/@@download/ENCFF885XJT.bam 54.4 M 0 52.9 M 0.972 PE 100 100 native 23.0 M 0.0 M 22.1 M 0.811 0.96 0.96 26.15 220 1.11 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/878f1f25-abbc-4915-863a-663e90474f3f/@@download/cross_correlation_plot/ENCFF439BDUENCFF233XOC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB236MYS michael-snyder:L-1745 "ENCFF233XOC,ENCFF439BDU" HiSeq 2000 2017-01-25T23:41:06.350187+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB6803695ZBFgGYGy9pk2 ENCSR443VRS https://www.encodeproject.org/experiments/ENCSR443VRS transcription factor CEBPB-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF613UTH https://www.encodeproject.org/files/ENCFF613UTH/@@download/ENCFF613UTH.bam ENCFF028FUX https://www.encodeproject.org/files/ENCFF028FUX/@@download/ENCFF028FUX.bam 96.9 M 0 91.7 M 0.947 PE 100 100 native 38.7 M 0.0 M 34.8 M 0.719 0.90 0.90 9.88 220 1.04 3.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/482dd534-2245-40dc-8e29-14deaacdfa41/@@download/cross_correlation_plot/ENCFF240IIDENCFF018QNM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB085OMO michael-snyder:L-2869 "ENCFF240IID,ENCFF018QNM" HiSeq 4000 2016-09-16T03:20:02.027332+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz03Q0369JzPBF2JXk4Pbp ENCSR443VRS https://www.encodeproject.org/experiments/ENCSR443VRS transcription factor CEBPB-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF744XAM https://www.encodeproject.org/files/ENCFF744XAM/@@download/ENCFF744XAM.bam ENCFF184OHK https://www.encodeproject.org/files/ENCFF184OHK/@@download/ENCFF184OHK.bam 105.5 M 0 101.2 M 0.960 PE 100 100 native 43.1 M 0.0 M 37.1 M 0.703 0.86 0.86 6.97 210 1.04 3.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/377e3e2e-4d6c-4e87-ad51-426bebe9dd1a/@@download/cross_correlation_plot/ENCFF299MGJENCFF729RMI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB286LGT michael-snyder:L-2870 "ENCFF299MGJ,ENCFF729RMI" HiSeq 4000 2016-09-16T03:19:33.498103+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz0900369Fb155KvKP91PB ENCSR100PKF https://www.encodeproject.org/experiments/ENCSR100PKF "RNA binding protein,transcription factor" CHD2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF776LUN https://www.encodeproject.org/files/ENCFF776LUN/@@download/ENCFF776LUN.bam ENCFF470TBR https://www.encodeproject.org/files/ENCFF470TBR/@@download/ENCFF470TBR.bam 65.7 M 0 65.0 M 0.990 PE 100 100 native 29.3 M 0.0 M 19.7 M 0.601 0.67 0.65 2.68 270 1.06 9.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/22d6d81c-2bfd-433e-a1e1-5c5c575d811c/@@download/cross_correlation_plot/ENCFF431FZMENCFF658AFP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB660TTA michael-snyder:L-512 "ENCFF658AFP,ENCFF431FZM" HiSeq 2000 2017-04-19T03:16:12.324425+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q7v1j0369B30JzPPqz8xKk ENCSR100PKF https://www.encodeproject.org/experiments/ENCSR100PKF "RNA binding protein,transcription factor" CHD2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF948ERX https://www.encodeproject.org/files/ENCFF948ERX/@@download/ENCFF948ERX.bam ENCFF651MGE https://www.encodeproject.org/files/ENCFF651MGE/@@download/ENCFF651MGE.bam 71.4 M 0 69.6 M 0.976 PE 100 100 native 31.3 M 0.0 M 27.5 M 0.770 0.88 0.87 7.78 270 1.18 3.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/adcced23-48dc-4c6b-8f83-4e1fe6759c13/@@download/cross_correlation_plot/ENCFF148WNKENCFF839EZM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB617OOM michael-snyder:L-513 "ENCFF148WNK,ENCFF839EZM" HiSeq 2000 2017-04-19T10:56:42.992907+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q7v8803696XFbgBYVz5bkY ENCSR620DUQ https://www.encodeproject.org/experiments/ENCSR620DUQ transcription factor CREB1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF950DAI https://www.encodeproject.org/files/ENCFF950DAI/@@download/ENCFF950DAI.bam ENCFF138ZAX https://www.encodeproject.org/files/ENCFF138ZAX/@@download/ENCFF138ZAX.bam 71.5 M 0 69.7 M 0.975 PE 100 100 native 29.8 M 0.0 M 29.4 M 0.821 0.99 0.99 88.44 215 1.48 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/836c2dae-d1f8-4967-84ad-e29ce198cce3/@@download/cross_correlation_plot/ENCFF424SGOENCFF104MAP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB084HOP michael-snyder:L-2653 "ENCFF104MAP,ENCFF424SGO" HiSeq 2000 2017-01-31T17:53:03.663737+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xkF003696P60X14GXy8G9 ENCSR620DUQ https://www.encodeproject.org/experiments/ENCSR620DUQ transcription factor CREB1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF618RFZ https://www.encodeproject.org/files/ENCFF618RFZ/@@download/ENCFF618RFZ.bam ENCFF663OKZ https://www.encodeproject.org/files/ENCFF663OKZ/@@download/ENCFF663OKZ.bam 65.1 M 0 62.9 M 0.967 PE 100 100 native 26.0 M 0.0 M 25.0 M 0.768 0.99 0.99 91.21 205 1.88 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/e86bc2e6-c5e3-485f-b2c2-510841a0d4e3/@@download/cross_correlation_plot/ENCFF843CJYENCFF548UJE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB178SSI michael-snyder:L-2654 "ENCFF843CJY,ENCFF548UJE" HiSeq 2000 2017-01-31T17:51:54.723356+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xkQQ03697kzvVJ0zQFj5K ENCSR897JAS https://www.encodeproject.org/experiments/ENCSR897JAS transcription factor CREB1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF520GWV https://www.encodeproject.org/files/ENCFF520GWV/@@download/ENCFF520GWV.bam ENCFF306ADO https://www.encodeproject.org/files/ENCFF306ADO/@@download/ENCFF306ADO.bam 76.5 M 0 74.3 M 0.971 PE 100 100 native 31.3 M 0.0 M 30.2 M 0.790 0.98 0.98 60.85 205 1.69 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a9eef9d-5d42-4853-8015-108e6a50f2a0/@@download/cross_correlation_plot/ENCFF220OFMENCFF653KYN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830CNH michael-snyder:L-1788 "ENCFF220OFM,ENCFF653KYN" HiSeq 2000 2017-01-26T01:21:54.847529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB100369424qKP3Yf7xbp ENCSR897JAS https://www.encodeproject.org/experiments/ENCSR897JAS transcription factor CREB1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF184EQF https://www.encodeproject.org/files/ENCFF184EQF/@@download/ENCFF184EQF.bam ENCFF206CHM https://www.encodeproject.org/files/ENCFF206CHM/@@download/ENCFF206CHM.bam 68.3 M 0 66.4 M 0.972 PE 100 100 native 28.7 M 0.0 M 27.3 M 0.799 0.95 0.95 21.60 210 1.56 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/cad6bcb8-72d0-4eed-971e-17e72acfdd7d/@@download/cross_correlation_plot/ENCFF841EZYENCFF804SDU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB295WCE michael-snyder:L-1789 "ENCFF841EZY,ENCFF804SDU" HiSeq 2000 2017-01-26T00:19:53.521241+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBQQ03694XqP2KpQJZpB6 ENCSR116QUR https://www.encodeproject.org/experiments/ENCSR116QUR RNA binding protein CSDE1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF185MXR https://www.encodeproject.org/files/ENCFF185MXR/@@download/ENCFF185MXR.bam ENCFF615DEK https://www.encodeproject.org/files/ENCFF615DEK/@@download/ENCFF615DEK.bam 106.2 M 0 101.3 M 0.954 PE 100 100 native 44.5 M 0.0 M 35.7 M 0.673 0.80 0.80 4.87 195 1.04 4.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8d34d4e-ae89-41bf-a4dc-78a4be5fbba1/@@download/cross_correlation_plot/ENCFF065UKLENCFF840TOI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB249QHK michael-snyder:L-3460 "ENCFF065UKL,ENCFF840TOI" HiSeq 4000 2017-06-06T18:23:20.163802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3QGQ0369BkKBG9095vxyp ENCSR116QUR https://www.encodeproject.org/experiments/ENCSR116QUR RNA binding protein CSDE1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF331CAE https://www.encodeproject.org/files/ENCFF331CAE/@@download/ENCFF331CAE.bam ENCFF685LMX https://www.encodeproject.org/files/ENCFF685LMX/@@download/ENCFF685LMX.bam 107.5 M 0 105.3 M 0.979 PE 100 100 native 45.7 M 0.0 M 35.6 M 0.662 0.78 0.77 4.31 210 1.05 5.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/16993a80-3ce6-453f-a54d-e0dbe7bff9dc/@@download/cross_correlation_plot/ENCFF715UPTENCFF036IDQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB455KAV michael-snyder:L-3461 "ENCFF036IDQ,ENCFF715UPT" HiSeq 4000 2017-06-06T18:24:20.190806+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3QKQ0369P28ZF91J6pJ5y ENCSR017CEO https://www.encodeproject.org/experiments/ENCSR017CEO transcription factor CUX1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF628FHG https://www.encodeproject.org/files/ENCFF628FHG/@@download/ENCFF628FHG.bam ENCFF133VVN https://www.encodeproject.org/files/ENCFF133VVN/@@download/ENCFF133VVN.bam 68.2 M 0 66.8 M 0.980 PE 100 100 native 29.9 M 0.0 M 25.1 M 0.735 0.84 0.83 5.76 240 1.08 4.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/686dd51e-6113-42bd-8ef5-a85c7130e361/@@download/cross_correlation_plot/ENCFF841SOAENCFF615YUR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB656YGH michael-snyder:L-515 "ENCFF615YUR,ENCFF841SOA" HiSeq 2000 2016-10-09T16:59:02.285119+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv473j0jv1XvFGkBjjfjQKP ENCSR017CEO https://www.encodeproject.org/experiments/ENCSR017CEO transcription factor CUX1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF096WSH https://www.encodeproject.org/files/ENCFF096WSH/@@download/ENCFF096WSH.bam ENCFF440WSC https://www.encodeproject.org/files/ENCFF440WSC/@@download/ENCFF440WSC.bam 72.5 M 0 71.0 M 0.979 PE 100 100 native 30.8 M 0.0 M 30.1 M 0.829 0.98 0.98 42.33 190 1.12 3.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/43cd0922-2241-47ca-8795-89d6eccbdbc2/@@download/cross_correlation_plot/ENCFF558UNFENCFF979GWR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB924UKO michael-snyder:L-138 "ENCFF979GWR,ENCFF558UNF" HiSeq 2000 2016-10-09T17:00:13.860178+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47580jv1XvFGkBjjfjQKg ENCSR330ADN https://www.encodeproject.org/experiments/ENCSR330ADN "RNA binding protein,transcription factor" DDX20-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF633BMT https://www.encodeproject.org/files/ENCFF633BMT/@@download/ENCFF633BMT.bam ENCFF758MYQ https://www.encodeproject.org/files/ENCFF758MYQ/@@download/ENCFF758MYQ.bam 70.4 M 0 66.6 M 0.946 PE 100 100 native 28.4 M 0.0 M 26.8 M 0.762 0.94 0.94 17.51 130 1.09 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/f884ceac-f916-480e-abff-44102c175df9/@@download/cross_correlation_plot/ENCFF299PPEENCFF388IIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB580EOY michael-snyder:L-3470 "ENCFF388IIQ,ENCFF299PPE" HiSeq 4000 2017-06-16T02:19:24.407938+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KKb803696X40G53k6G8Xg ENCSR330ADN https://www.encodeproject.org/experiments/ENCSR330ADN "RNA binding protein,transcription factor" DDX20-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF682IXJ https://www.encodeproject.org/files/ENCFF682IXJ/@@download/ENCFF682IXJ.bam ENCFF724SSE https://www.encodeproject.org/files/ENCFF724SSE/@@download/ENCFF724SSE.bam 95.3 M 0 82.4 M 0.865 PE 100 100 native 34.1 M 0.0 M 29.2 M 0.613 0.86 0.86 6.83 135 1.10 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/74b038f3-de53-421a-b87e-a59c772d6713/@@download/cross_correlation_plot/ENCFF964JRVENCFF064JDQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB775IYV michael-snyder:L-3471 "ENCFF964JRV,ENCFF064JDQ" HiSeq 4000 2017-06-16T05:23:01.674537+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KKjQ0369J56xV165K4GZ8 ENCSR234VCE https://www.encodeproject.org/experiments/ENCSR234VCE transcription factor DPF2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF024GIB https://www.encodeproject.org/files/ENCFF024GIB/@@download/ENCFF024GIB.bam ENCFF970HIB https://www.encodeproject.org/files/ENCFF970HIB/@@download/ENCFF970HIB.bam 54.3 M 0 53.2 M 0.981 PE 100 100 native 23.5 M 0.0 M 22.5 M 0.828 0.96 0.96 22.52 200 1.13 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5e4e0b5-1ed2-4077-8ce1-5c579e0042db/@@download/cross_correlation_plot/ENCFF875MOPENCFF105UNR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB862XAX michael-snyder:L-1922 "ENCFF105UNR,ENCFF875MOP" HiSeq 2000 2016-10-09T17:12:18.395198+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3g2j0jv1zBYbxYJ5zzyqF ENCSR234VCE https://www.encodeproject.org/experiments/ENCSR234VCE transcription factor DPF2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF411XGJ https://www.encodeproject.org/files/ENCFF411XGJ/@@download/ENCFF411XGJ.bam ENCFF232FAS https://www.encodeproject.org/files/ENCFF232FAS/@@download/ENCFF232FAS.bam 72.3 M 0 70.7 M 0.978 PE 100 100 native 31.0 M 0.0 M 29.7 M 0.821 0.96 0.96 24.09 200 1.08 2.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/41521f24-fdcb-4001-89fe-5303e2051118/@@download/cross_correlation_plot/ENCFF056SPKENCFF958CWG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB037QBB michael-snyder:L-1923 "ENCFF056SPK,ENCFF958CWG" HiSeq 2000 2016-10-09T17:13:50.483406+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3g400jv1g5yGjfvVx0KYp ENCSR525TYE https://www.encodeproject.org/experiments/ENCSR525TYE transcription factor DPF2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF542QDQ https://www.encodeproject.org/files/ENCFF542QDQ/@@download/ENCFF542QDQ.bam ENCFF847ZZV https://www.encodeproject.org/files/ENCFF847ZZV/@@download/ENCFF847ZZV.bam 71.7 M 0 65.1 M 0.908 PE 100 100 native 28.3 M 0.0 M 23.9 M 0.667 0.84 0.84 6.15 200 1.06 7.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7b8ee1e-7eb2-4fcc-bbe9-dbf78d8fc112/@@download/cross_correlation_plot/ENCFF430WKRENCFF747IVQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB589EVG michael-snyder:L-3462 "ENCFF747IVQ,ENCFF430WKR" HiSeq 4000 2017-05-05T22:02:44.655009+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469x6Q036911Q6zKVv5090B ENCSR525TYE https://www.encodeproject.org/experiments/ENCSR525TYE transcription factor DPF2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF674VNJ https://www.encodeproject.org/files/ENCFF674VNJ/@@download/ENCFF674VNJ.bam ENCFF935IXM https://www.encodeproject.org/files/ENCFF935IXM/@@download/ENCFF935IXM.bam 75.2 M 0 73.5 M 0.978 PE 100 100 native 31.5 M 0.0 M 27.4 M 0.730 0.87 0.87 7.59 195 1.05 4.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/e73d0e87-4082-459c-af35-aa42807fae2f/@@download/cross_correlation_plot/ENCFF241ZPYENCFF403CMM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB433XNU michael-snyder:L-3463 "ENCFF403CMM,ENCFF241ZPY" HiSeq 4000 2017-05-05T22:45:57.583566+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469xB803698KGf370q9771Q ENCSR897ZXU https://www.encodeproject.org/experiments/ENCSR897ZXU transcription factor E2F8-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF758PTP https://www.encodeproject.org/files/ENCFF758PTP/@@download/ENCFF758PTP.bam ENCFF257GMW https://www.encodeproject.org/files/ENCFF257GMW/@@download/ENCFF257GMW.bam 52.7 M 0 51.8 M 0.983 PE 100 100 native 22.9 M 0.0 M 20.9 M 0.792 0.91 0.91 11.16 245 1.06 4.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/27cd0674-01bd-4b91-a97e-a0e266e8e920/@@download/cross_correlation_plot/ENCFF738QTEENCFF272CZX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB126MSR michael-snyder:L-1930 "ENCFF272CZX,ENCFF738QTE" HiSeq 2000 2016-10-09T17:09:36.389476+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pkj0jv1vY92b0GYjVFY6 ENCSR897ZXU https://www.encodeproject.org/experiments/ENCSR897ZXU transcription factor E2F8-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF998TMI https://www.encodeproject.org/files/ENCFF998TMI/@@download/ENCFF998TMI.bam ENCFF787GDV https://www.encodeproject.org/files/ENCFF787GDV/@@download/ENCFF787GDV.bam 51.2 M 0 50.2 M 0.980 PE 100 100 native 22.1 M 0.0 M 20.1 M 0.786 0.91 0.91 11.05 260 1.06 5.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/009b35e7-afce-4db0-bb5d-7904659f3c33/@@download/cross_correlation_plot/ENCFF251YCFENCFF152QAM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB181EOK michael-snyder:L-1931 "ENCFF251YCF,ENCFF152QAM" HiSeq 2000 2016-10-09T17:08:50.320320+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pq80jv1g5yGjfvVx0Kg1 ENCSR841YWU https://www.encodeproject.org/experiments/ENCSR841YWU transcription factor E4F1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF807KMB https://www.encodeproject.org/files/ENCFF807KMB/@@download/ENCFF807KMB.bam ENCFF670NKM https://www.encodeproject.org/files/ENCFF670NKM/@@download/ENCFF670NKM.bam 60.6 M 0 58.5 M 0.966 PE 100 100 native 25.1 M 0.0 M 24.2 M 0.798 0.97 0.97 28.81 205 1.08 3.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/108d321c-9ed1-441a-a857-4dbf071894a7/@@download/cross_correlation_plot/ENCFF170QQMENCFF376TGF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB213XGU michael-snyder:L-2210 "ENCFF170QQM,ENCFF376TGF" HiSeq 2000 2016-10-09T17:14:42.752782+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3z9Q0jv1g5yGjfvVx0Kqy ENCSR841YWU https://www.encodeproject.org/experiments/ENCSR841YWU transcription factor E4F1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF842HOT https://www.encodeproject.org/files/ENCFF842HOT/@@download/ENCFF842HOT.bam ENCFF362XWJ https://www.encodeproject.org/files/ENCFF362XWJ/@@download/ENCFF362XWJ.bam 60.4 M 0 58.2 M 0.963 PE 100 100 native 25.1 M 0.0 M 23.6 M 0.781 0.94 0.94 16.53 195 1.09 2.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/a91d626f-0ad7-426c-a251-a9cccb3ce940/@@download/cross_correlation_plot/ENCFF064YHZENCFF794GSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB210VJS michael-snyder:L-2269 "ENCFF794GSX,ENCFF064YHZ" HiSeq 2000 2016-10-09T17:13:29.850519+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zF00jv1f60PxyZ9JGP18 ENCSR502NRF https://www.encodeproject.org/experiments/ENCSR502NRF transcription factor ELF1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF558UMD https://www.encodeproject.org/files/ENCFF558UMD/@@download/ENCFF558UMD.bam ENCFF603PYG https://www.encodeproject.org/files/ENCFF603PYG/@@download/ENCFF603PYG.bam 95.7 M 0 91.3 M 0.954 PE 100 100 native 39.8 M 0.0 M 36.1 M 0.755 0.91 0.91 10.52 170 1.10 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb0d0b8b-abf1-4a38-9a0d-2abf06b0ac40/@@download/cross_correlation_plot/ENCFF071LVJENCFF932LBZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB690UAL michael-snyder:L-3525 "ENCFF932LBZ,ENCFF071LVJ" HiSeq 4000 2017-06-23T02:14:23.921408+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Y8Q036946VJy6YKjBJpg ENCSR502NRF https://www.encodeproject.org/experiments/ENCSR502NRF transcription factor ELF1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF629RTF https://www.encodeproject.org/files/ENCFF629RTF/@@download/ENCFF629RTF.bam ENCFF153MOU https://www.encodeproject.org/files/ENCFF153MOU/@@download/ENCFF153MOU.bam 119.2 M 0 106.2 M 0.891 PE 100 100 native 46.5 M 0.0 M 39.3 M 0.660 0.85 0.84 6.33 165 1.25 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb7f210d-90f4-44fd-979c-52339f414998/@@download/cross_correlation_plot/ENCFF159PHGENCFF216PTG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB782CIR michael-snyder:L-3526 "ENCFF159PHG,ENCFF216PTG" HiSeq 4000 2017-06-23T03:46:26.884727+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560YFj0369Bx4kZ6Y9vzGV2 ENCSR337NQP https://www.encodeproject.org/experiments/ENCSR337NQP transcription factor ESRRA-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF340MAJ https://www.encodeproject.org/files/ENCFF340MAJ/@@download/ENCFF340MAJ.bam ENCFF545PED https://www.encodeproject.org/files/ENCFF545PED/@@download/ENCFF545PED.bam 54.2 M 0 52.6 M 0.971 PE 100 100 native 22.8 M 0.0 M 21.5 M 0.792 0.94 0.94 16.26 200 1.07 4.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/937c1046-18cc-47f9-b154-e6a1b74a1919/@@download/cross_correlation_plot/ENCFF659LDKENCFF034NND.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB128PEL michael-snyder:L-2867 "ENCFF034NND,ENCFF659LDK" HiSeq 2000 2017-01-31T17:44:12.988238+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2800Pj0369FyB7213b82gpP ENCSR337NQP https://www.encodeproject.org/experiments/ENCSR337NQP transcription factor ESRRA-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF915PJM https://www.encodeproject.org/files/ENCFF915PJM/@@download/ENCFF915PJM.bam ENCFF228NIW https://www.encodeproject.org/files/ENCFF228NIW/@@download/ENCFF228NIW.bam 57.7 M 0 52.8 M 0.915 PE 100 100 native 22.9 M 0.0 M 21.9 M 0.758 0.95 0.95 21.29 175 1.08 3.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/da64c7db-be90-41d2-aead-f2b26761a272/@@download/cross_correlation_plot/ENCFF704VXZENCFF312PYR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB246AXW michael-snyder:L-2868 "ENCFF312PYR,ENCFF704VXZ" HiSeq 2000 2017-01-31T17:44:11.903984+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2800bQ0369FB2f75bZ9VbV4 ENCSR465VLK https://www.encodeproject.org/experiments/ENCSR465VLK transcription factor FOXK2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF060DER https://www.encodeproject.org/files/ENCFF060DER/@@download/ENCFF060DER.bam ENCFF508WTA https://www.encodeproject.org/files/ENCFF508WTA/@@download/ENCFF508WTA.bam 53.5 M 0 51.9 M 0.969 PE 100 100 native 22.4 M 0.0 M 21.1 M 0.790 0.94 0.94 17.42 205 1.08 4.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/361a5d6c-eb2a-4ad9-a04f-ffe15b157818/@@download/cross_correlation_plot/ENCFF404XXIENCFF580UJW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB772BAJ michael-snyder:L-2211 "ENCFF580UJW,ENCFF404XXI" HiSeq 2000 2016-10-09T17:03:26.575078+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ByQ0jv1XYYX2Fxk3f59j ENCSR465VLK https://www.encodeproject.org/experiments/ENCSR465VLK transcription factor FOXK2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF357QWW https://www.encodeproject.org/files/ENCFF357QWW/@@download/ENCFF357QWW.bam ENCFF958MLY https://www.encodeproject.org/files/ENCFF958MLY/@@download/ENCFF958MLY.bam 69.1 M 0 67.5 M 0.976 PE 100 100 native 29.3 M 0.0 M 28.8 M 0.833 0.98 0.98 55.07 195 1.06 4.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2166bff-762a-4df5-9459-31e7b82474da/@@download/cross_correlation_plot/ENCFF791NQCENCFF645TLG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB400SMX michael-snyder:L-2270 "ENCFF645TLG,ENCFF791NQC" HiSeq 2000 2016-10-09T17:04:16.846114+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4F000jv1XYYX2Fxk3f5B1 ENCSR423RTK https://www.encodeproject.org/experiments/ENCSR423RTK transcription factor GATA3-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF143HRA https://www.encodeproject.org/files/ENCFF143HRA/@@download/ENCFF143HRA.bam ENCFF762XBT https://www.encodeproject.org/files/ENCFF762XBT/@@download/ENCFF762XBT.bam 218.1 M 0 177.1 M 0.812 PE 100 100 native 76.6 M 0.0 M 54.4 M 0.499 0.71 0.70 3.28 230 1.32 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/87ab9cc6-3230-49d5-8b39-b48700ed9654/@@download/cross_correlation_plot/ENCFF623RJMENCFF498UGH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB702DPT michael-snyder:L-2740 "ENCFF498UGH,ENCFF623RJM" HiSeq 4000 2016-09-16T03:27:46.385041+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXZ803696yyJ91JYf9pGj ENCSR423RTK https://www.encodeproject.org/experiments/ENCSR423RTK transcription factor GATA3-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF523QZM https://www.encodeproject.org/files/ENCFF523QZM/@@download/ENCFF523QZM.bam ENCFF258QKU https://www.encodeproject.org/files/ENCFF258QKU/@@download/ENCFF258QKU.bam 128.8 M 0 108.1 M 0.839 PE 100 100 native 46.8 M 0.0 M 20.8 M 0.323 0.44 0.44 1.77 235 1.33 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7af1e8e-5178-483d-9f0a-668fb43e19b5/@@download/cross_correlation_plot/ENCFF044ZEJENCFF067SVP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB595WYZ michael-snyder:L-2741 "ENCFF067SVP,ENCFF044ZEJ" HiSeq 4000 2016-09-16T03:22:19.969101+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXgQ03690qG5Zzk84B8VQ ENCSR389BLX https://www.encodeproject.org/experiments/ENCSR389BLX transcription factor GATAD2B-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF763DOU https://www.encodeproject.org/files/ENCFF763DOU/@@download/ENCFF763DOU.bam ENCFF852QTA https://www.encodeproject.org/files/ENCFF852QTA/@@download/ENCFF852QTA.bam 86.5 M 0 75.8 M 0.876 PE 100 100 native 32.2 M 0.0 M 29.3 M 0.678 0.91 0.91 11.06 220 1.05 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bf456b8-7872-4b03-9038-9336ab10ec06/@@download/cross_correlation_plot/ENCFF281DBVENCFF059WXQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB057JGF michael-snyder:L-2875 "ENCFF059WXQ,ENCFF281DBV" HiSeq 4000 2016-09-16T03:21:26.249996+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyf8j03695XjQpy58BVxZY ENCSR389BLX https://www.encodeproject.org/experiments/ENCSR389BLX transcription factor GATAD2B-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF003ETE https://www.encodeproject.org/files/ENCFF003ETE/@@download/ENCFF003ETE.bam ENCFF988WOM https://www.encodeproject.org/files/ENCFF988WOM/@@download/ENCFF988WOM.bam 109.5 M 0 100.6 M 0.918 PE 100 100 native 42.7 M 0.0 M 39.1 M 0.713 0.91 0.91 11.42 225 1.04 3.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/656aca4a-9a34-407d-a0f4-66721f460dfa/@@download/cross_correlation_plot/ENCFF402TFMENCFF612WBL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB955XMX michael-snyder:L-2876 "ENCFF402TFM,ENCFF612WBL" HiSeq 4000 2016-09-16T03:23:13.100034+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyfFQ0369PzXj14kJK8P1g ENCSR557JTZ https://www.encodeproject.org/experiments/ENCSR557JTZ "RNA binding protein,transcription factor" GTF2F1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF662RWY https://www.encodeproject.org/files/ENCFF662RWY/@@download/ENCFF662RWY.bam ENCFF643FMV https://www.encodeproject.org/files/ENCFF643FMV/@@download/ENCFF643FMV.bam 62.9 M 0 61.1 M 0.972 PE 100 100 native 26.3 M 0.0 M 25.2 M 0.800 0.96 0.96 23.36 195 1.09 6.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f89f6d5-6bca-44c7-9966-e44a7fba8761/@@download/cross_correlation_plot/ENCFF002DPOENCFF002EGK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB087GPC michael-snyder:653_A_Tru-seq_ATCACG "ENCFF002EGK,ENCFF002DPO" HiSeq 2000 2016-10-09T17:04:28.682453+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43100jv1QxJBfj5Zb2pb8 ENCSR557JTZ https://www.encodeproject.org/experiments/ENCSR557JTZ "RNA binding protein,transcription factor" GTF2F1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF069WYM https://www.encodeproject.org/files/ENCFF069WYM/@@download/ENCFF069WYM.bam ENCFF790CWC https://www.encodeproject.org/files/ENCFF790CWC/@@download/ENCFF790CWC.bam 90.4 M 0 88.7 M 0.982 PE 100 100 native 39.5 M 0.0 M 37.7 M 0.834 0.95 0.95 21.61 195 1.07 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c0338fe-b438-47ad-8351-c3b25162790d/@@download/cross_correlation_plot/ENCFF002EGSENCFF002DPS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB579DPE michael-snyder:653_B_Tru-seq_ATCACG "ENCFF002EGS,ENCFF002DPS" HiSeq 2000 2016-10-09T17:08:50.400983+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv432j0jv1XvFGkBjjfjQ94 ENCSR697CUP https://www.encodeproject.org/experiments/ENCSR697CUP transcription factor HCFC1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF170NQD https://www.encodeproject.org/files/ENCFF170NQD/@@download/ENCFF170NQD.bam ENCFF320IFH https://www.encodeproject.org/files/ENCFF320IFH/@@download/ENCFF320IFH.bam 68.6 M 0 67.8 M 0.989 PE 100 100 native 30.4 M 0.0 M 28.3 M 0.825 0.93 0.93 14.33 250 1.25 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5ad183b-35d3-4e1f-8b42-8cd492bdd0c0/@@download/cross_correlation_plot/ENCFF489ABLENCFF373VCW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB510IZB michael-snyder:L-375 "ENCFF373VCW,ENCFF489ABL" HiSeq 2000 2016-10-09T17:30:54.442322+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67GQ0jv1xFKXGVbpg0QGJ ENCSR697CUP https://www.encodeproject.org/experiments/ENCSR697CUP transcription factor HCFC1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF516CKJ https://www.encodeproject.org/files/ENCFF516CKJ/@@download/ENCFF516CKJ.bam ENCFF944MAN https://www.encodeproject.org/files/ENCFF944MAN/@@download/ENCFF944MAN.bam 94.4 M 0 91.5 M 0.969 PE 100 100 native 39.9 M 0.0 M 34.1 M 0.722 0.85 0.85 6.59 205 1.24 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe868092-714b-4e5b-b49a-3f94d2f51f30/@@download/cross_correlation_plot/ENCFF884TDTENCFF961XAS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB713RQL michael-snyder:L-132 "ENCFF961XAS,ENCFF884TDT" HiSeq 2000 2016-10-09T17:31:14.904363+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67P00jv1XQK7ZK9053Xgg ENCSR200CUA https://www.encodeproject.org/experiments/ENCSR200CUA "RNA binding protein,transcription factor" HDGF-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF106SIO https://www.encodeproject.org/files/ENCFF106SIO/@@download/ENCFF106SIO.bam ENCFF413NHT https://www.encodeproject.org/files/ENCFF413NHT/@@download/ENCFF413NHT.bam 75.9 M 0 74.2 M 0.978 PE 100 100 native 32.4 M 0.0 M 32.2 M 0.848 0.99 0.99 153.47 210 1.05 3.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc01e4ff-d34b-40e5-b945-b78ad79f69d7/@@download/cross_correlation_plot/ENCFF592NQIENCFF287QDK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB212QXI michael-snyder:L-2260 "ENCFF592NQI,ENCFF287QDK" HiSeq 2000 2016-10-09T17:31:31.902001+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv65Fj0jv1YFyQ90J3z9yZQ ENCSR200CUA https://www.encodeproject.org/experiments/ENCSR200CUA "RNA binding protein,transcription factor" HDGF-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF552YQY https://www.encodeproject.org/files/ENCFF552YQY/@@download/ENCFF552YQY.bam ENCFF495FDI https://www.encodeproject.org/files/ENCFF495FDI/@@download/ENCFF495FDI.bam 73.0 M 0 71.4 M 0.978 PE 100 100 native 31.1 M 0.0 M 30.9 M 0.845 0.99 0.99 139.24 210 1.05 4.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/7426fc38-75fa-4b23-8456-f2b6ad230dc9/@@download/cross_correlation_plot/ENCFF217CEAENCFF094RKI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB761YGZ michael-snyder:L-2261 "ENCFF094RKI,ENCFF217CEA" HiSeq 2000 2016-10-09T17:31:13.583919+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv65K00jv1fvz446Zf2J5v8 ENCSR109ODF https://www.encodeproject.org/experiments/ENCSR109ODF transcription factor HES1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF989MGN https://www.encodeproject.org/files/ENCFF989MGN/@@download/ENCFF989MGN.bam ENCFF372IXY https://www.encodeproject.org/files/ENCFF372IXY/@@download/ENCFF372IXY.bam 90.8 M 0 87.8 M 0.967 PE 100 100 native 38.0 M 0.0 M 36.3 M 0.799 0.95 0.95 21.43 205 1.04 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee0c17eb-9993-4662-9faa-f037bc279bcd/@@download/cross_correlation_plot/ENCFF039DVLENCFF103YIS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB764GBS michael-snyder:L-2262 "ENCFF103YIS,ENCFF039DVL" HiSeq 2000 2017-04-09T00:04:52.521060+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z06K80369PXf8XFKXjzZJ7 ENCSR109ODF https://www.encodeproject.org/experiments/ENCSR109ODF transcription factor HES1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF967SQJ https://www.encodeproject.org/files/ENCFF967SQJ/@@download/ENCFF967SQJ.bam ENCFF806ZMX https://www.encodeproject.org/files/ENCFF806ZMX/@@download/ENCFF806ZMX.bam 89.6 M 0 86.3 M 0.963 PE 100 100 native 37.3 M 0.0 M 36.4 M 0.812 0.98 0.98 43.66 185 1.05 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf48605b-39b4-499f-b6fe-0c186cd2ef31/@@download/cross_correlation_plot/ENCFF064WNXENCFF753IGR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB007RMT michael-snyder:L-2263 "ENCFF064WNX,ENCFF753IGR" HiSeq 2000 2017-04-09T00:05:36.789214+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z06Y80369PG2Y6FPBfKqKb ENCSR062HDL https://www.encodeproject.org/experiments/ENCSR062HDL transcription factor HSF1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF752IEK https://www.encodeproject.org/files/ENCFF752IEK/@@download/ENCFF752IEK.bam ENCFF037FUA https://www.encodeproject.org/files/ENCFF037FUA/@@download/ENCFF037FUA.bam 55.8 M 0 54.9 M 0.985 PE 100 100 native 24.6 M 0.0 M 22.6 M 0.810 0.92 0.92 11.69 190 1.10 10.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/76d013be-834a-4a56-a8d6-104eff0a1920/@@download/cross_correlation_plot/ENCFF002DPNENCFF002EGL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB452EKC michael-snyder:640_A_Tru-seq_ATCACG "ENCFF002EGL,ENCFF002DPN" HiSeq 2000 2016-10-09T17:02:53.452247+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Xv00jv1xPyfX78Yz4jJ1 ENCSR062HDL https://www.encodeproject.org/experiments/ENCSR062HDL transcription factor HSF1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF860ZZO https://www.encodeproject.org/files/ENCFF860ZZO/@@download/ENCFF860ZZO.bam ENCFF452ZIX https://www.encodeproject.org/files/ENCFF452ZIX/@@download/ENCFF452ZIX.bam 92.7 M 0 90.8 M 0.980 PE 100 100 native 40.8 M 0.0 M 34.4 M 0.742 0.84 0.84 6.19 210 1.06 5.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5c3d259-6e55-4a1d-b5f7-48eb5a19fe23/@@download/cross_correlation_plot/ENCFF002EGTENCFF002DPU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB724CXF michael-snyder:677_A_TruSeq_ATCACG "ENCFF002EGT,ENCFF002DPU" HiSeq 2000 2016-10-09T17:07:05.655954+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XxQ0jv1vY92b0GYjVG8X ENCSR176EXN https://www.encodeproject.org/experiments/ENCSR176EXN transcription factor JUN-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF126FTH https://www.encodeproject.org/files/ENCFF126FTH/@@download/ENCFF126FTH.bam ENCFF114RER https://www.encodeproject.org/files/ENCFF114RER/@@download/ENCFF114RER.bam 57.2 M 0 55.9 M 0.978 PE 100 100 native 25.0 M 0.0 M 19.5 M 0.683 0.78 0.77 4.26 220 1.10 7.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ae5b684-2427-4745-8452-0d7e77e6a562/@@download/cross_correlation_plot/ENCFF002DPKENCFF002DUD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB720CSU michael-snyder:635_A_Tru-seq_TTAGGC "ENCFF002DUD,ENCFF002DPK" HiSeq 2000 2016-10-29T18:04:04.323364+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B28Qj0jv1X3z1QYVBPppYp ENCSR176EXN https://www.encodeproject.org/experiments/ENCSR176EXN transcription factor JUN-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF008AZP https://www.encodeproject.org/files/ENCFF008AZP/@@download/ENCFF008AZP.bam ENCFF015TAN https://www.encodeproject.org/files/ENCFF015TAN/@@download/ENCFF015TAN.bam 83.2 M 0 81.3 M 0.977 PE 100 100 native 36.5 M 0.0 M 33.8 M 0.812 0.92 0.92 12.91 205 1.06 6.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/955092a7-b4f1-489a-90dd-716b789ee1e4/@@download/cross_correlation_plot/ENCFF002EGNENCFF002DPR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB508LER michael-snyder:694_A_TruSeq_CGATGT "ENCFF002DPR,ENCFF002EGN" HiSeq 2000 2016-10-29T18:07:19.562550+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B28Z00jv1vJ6xQfbB7FXf5 ENCSR725ELR https://www.encodeproject.org/experiments/ENCSR725ELR RNA binding protein LARP7-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF946OVU https://www.encodeproject.org/files/ENCFF946OVU/@@download/ENCFF946OVU.bam ENCFF998NZU https://www.encodeproject.org/files/ENCFF998NZU/@@download/ENCFF998NZU.bam 68.5 M 0 61.0 M 0.890 PE 100 100 native 26.5 M 0.0 M 24.4 M 0.711 0.92 0.92 12.37 200 1.06 7.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/59fc7045-f9e8-4704-8238-dd35977260b1/@@download/cross_correlation_plot/ENCFF665APOENCFF969AXP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB649CZS michael-snyder:L-3464 "ENCFF665APO,ENCFF969AXP" HiSeq 4000 2017-05-05T21:56:44.223904+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469z0Q0369GBq3P37KJ0Kbf ENCSR725ELR https://www.encodeproject.org/experiments/ENCSR725ELR RNA binding protein LARP7-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF768VYD https://www.encodeproject.org/files/ENCFF768VYD/@@download/ENCFF768VYD.bam ENCFF504BOV https://www.encodeproject.org/files/ENCFF504BOV/@@download/ENCFF504BOV.bam 73.6 M 0 72.0 M 0.977 PE 100 100 native 31.2 M 0.0 M 28.5 M 0.773 0.91 0.91 11.45 195 1.05 7.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/052bbeeb-a7cb-457b-a218-1deadb179294/@@download/cross_correlation_plot/ENCFF911IYJENCFF526GZO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB143FKD michael-snyder:L-3465 "ENCFF911IYJ,ENCFF526GZO" HiSeq 4000 2017-05-05T22:37:12.294328+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469z480369GBq3P37KJ0Kbz ENCSR427BBI https://www.encodeproject.org/experiments/ENCSR427BBI transcription factor MLLT1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF266ROF https://www.encodeproject.org/files/ENCFF266ROF/@@download/ENCFF266ROF.bam ENCFF115ODC https://www.encodeproject.org/files/ENCFF115ODC/@@download/ENCFF115ODC.bam 59.9 M 0 58.2 M 0.973 PE 100 100 native 25.2 M 0.0 M 24.5 M 0.818 0.97 0.97 36.95 200 1.07 3.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/61b905bf-5611-4a04-9ae9-bd3bb976d301/@@download/cross_correlation_plot/ENCFF684TOLENCFF099ZTK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB082HVP michael-snyder:L-2209 "ENCFF099ZTK,ENCFF684TOL" HiSeq 2000 2016-10-09T17:04:14.807136+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43JQ0jv1zBYbxYJ5zzz8K ENCSR427BBI https://www.encodeproject.org/experiments/ENCSR427BBI transcription factor MLLT1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF953GQZ https://www.encodeproject.org/files/ENCFF953GQZ/@@download/ENCFF953GQZ.bam ENCFF527PRI https://www.encodeproject.org/files/ENCFF527PRI/@@download/ENCFF527PRI.bam 57.6 M 0 55.9 M 0.971 PE 100 100 native 24.2 M 0.0 M 23.7 M 0.823 0.98 0.98 49.42 205 1.08 3.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ceba346-fb2f-448c-96b8-a545891c2e7b/@@download/cross_correlation_plot/ENCFF085NFEENCFF214JGI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB047FRN michael-snyder:L-2268 "ENCFF214JGI,ENCFF085NFE" HiSeq 2000 2016-10-09T17:04:02.906755+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43P00jv1zBYbxYJ5zzz8g ENCSR348JOJ https://www.encodeproject.org/experiments/ENCSR348JOJ transcription factor MTA1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF742QMN https://www.encodeproject.org/files/ENCFF742QMN/@@download/ENCFF742QMN.bam ENCFF123XST https://www.encodeproject.org/files/ENCFF123XST/@@download/ENCFF123XST.bam 81.2 M 0 80.3 M 0.989 PE 100 100 native 36.0 M 0.0 M 33.1 M 0.814 0.92 0.92 12.17 215 1.09 4.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/30f49073-6e1a-4c7b-a43d-03a5fe5b06af/@@download/cross_correlation_plot/ENCFF002EGVENCFF002EHC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285GDH michael-snyder:652_A_Tru-seq_CGATGT "ENCFF002EGV,ENCFF002EHC" HiSeq 2000 2016-10-09T17:11:58.446021+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv689Q0jv1YFyQ90J3z9ybF ENCSR348JOJ https://www.encodeproject.org/experiments/ENCSR348JOJ transcription factor MTA1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF316XFC https://www.encodeproject.org/files/ENCFF316XFC/@@download/ENCFF316XFC.bam ENCFF171UMF https://www.encodeproject.org/files/ENCFF171UMF/@@download/ENCFF171UMF.bam 74.1 M 0 73.2 M 0.987 PE 100 100 native 32.7 M 0.0 M 30.3 M 0.817 0.93 0.93 13.47 240 1.09 5.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/ccc1bf2a-75e9-4f23-8a33-34e5c0c08633/@@download/cross_correlation_plot/ENCFF002EGZENCFF002DTQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB434ZBI michael-snyder:652_B_Tru-seq_CGATGT "ENCFF002DTQ,ENCFF002EGZ" HiSeq 2000 2016-10-09T17:11:51.506825+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv68Fj0jv1x3KYJK9kQ04gJ ENCSR551ZDZ https://www.encodeproject.org/experiments/ENCSR551ZDZ transcription factor MTA2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF525RIY https://www.encodeproject.org/files/ENCFF525RIY/@@download/ENCFF525RIY.bam ENCFF658IOY https://www.encodeproject.org/files/ENCFF658IOY/@@download/ENCFF658IOY.bam 57.7 M 0 56.1 M 0.973 PE 100 100 native 24.3 M 0.0 M 23.1 M 0.800 0.95 0.95 18.90 195 1.07 4.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/83e10e60-a2ba-4eff-b03a-93a0af3f0cce/@@download/cross_correlation_plot/ENCFF863ZBOENCFF604CSF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB960HVE michael-snyder:L-2212 "ENCFF604CSF,ENCFF863ZBO" HiSeq 2000 2016-10-09T17:10:15.756461+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pX80jv1XYYX2Fxk3f4f0 ENCSR551ZDZ https://www.encodeproject.org/experiments/ENCSR551ZDZ transcription factor MTA2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF167ASQ https://www.encodeproject.org/files/ENCFF167ASQ/@@download/ENCFF167ASQ.bam ENCFF186DXS https://www.encodeproject.org/files/ENCFF186DXS/@@download/ENCFF186DXS.bam 87.1 M 0 85.1 M 0.977 PE 100 100 native 37.1 M 0.0 M 36.4 M 0.836 0.98 0.98 49.66 200 1.05 3.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c9e8a75-62ae-40c0-ab6d-91749b2c914c/@@download/cross_correlation_plot/ENCFF215BOJENCFF416JNG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB866CIU michael-snyder:L-2271 "ENCFF416JNG,ENCFF215BOJ" HiSeq 2000 2016-10-09T17:14:13.671483+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pYj0jv1vY92b0GYjVFXy ENCSR391KQC https://www.encodeproject.org/experiments/ENCSR391KQC transcription factor MTA3-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF025NCE https://www.encodeproject.org/files/ENCFF025NCE/@@download/ENCFF025NCE.bam ENCFF255ZLF https://www.encodeproject.org/files/ENCFF255ZLF/@@download/ENCFF255ZLF.bam 53.9 M 0 52.5 M 0.973 PE 100 100 native 22.7 M 0.0 M 22.0 M 0.816 0.97 0.97 31.72 210 1.07 3.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/230c8f20-cf30-4555-b276-d5f0e6e23999/@@download/cross_correlation_plot/ENCFF993ZYNENCFF911VAQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB442SWD michael-snyder:L-1746 "ENCFF911VAQ,ENCFF993ZYN" HiSeq 2000 2016-10-09T17:33:31.123115+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5x100jv1YFyQ90J3z9yX5 ENCSR391KQC https://www.encodeproject.org/experiments/ENCSR391KQC transcription factor MTA3-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF608ERF https://www.encodeproject.org/files/ENCFF608ERF/@@download/ENCFF608ERF.bam ENCFF348TXA https://www.encodeproject.org/files/ENCFF348TXA/@@download/ENCFF348TXA.bam 59.3 M 0 57.1 M 0.962 PE 100 100 native 24.5 M 0.0 M 23.6 M 0.795 0.96 0.96 28.18 185 1.07 3.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/853fa34a-99de-479a-8ba7-f2b7242552cf/@@download/cross_correlation_plot/ENCFF158FFUENCFF646AFJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB515SII michael-snyder:L-1747 "ENCFF158FFU,ENCFF646AFJ" HiSeq 2000 2016-10-09T17:33:51.806159+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5x380jv1fvz446Zf2J5pK ENCSR573OJP https://www.encodeproject.org/experiments/ENCSR573OJP transcription factor NCOA3-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF078ZTO https://www.encodeproject.org/files/ENCFF078ZTO/@@download/ENCFF078ZTO.bam ENCFF952RLL https://www.encodeproject.org/files/ENCFF952RLL/@@download/ENCFF952RLL.bam 67.1 M 0 65.1 M 0.971 PE 100 100 native 28.3 M 0.0 M 26.5 M 0.790 0.94 0.94 15.63 155 1.14 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2b4d96d-2570-4e14-8d9c-261dc7c74bda/@@download/cross_correlation_plot/ENCFF281DBSENCFF509BWO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB328RKT michael-snyder:L-2651 "ENCFF509BWO,ENCFF281DBS" HiSeq 2000 2017-01-31T17:52:24.650231+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xkf80369FY0gqGqz3qB30 ENCSR573OJP https://www.encodeproject.org/experiments/ENCSR573OJP transcription factor NCOA3-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF106HDQ https://www.encodeproject.org/files/ENCFF106HDQ/@@download/ENCFF106HDQ.bam ENCFF816DGV https://www.encodeproject.org/files/ENCFF816DGV/@@download/ENCFF816DGV.bam 71.9 M 0 70.2 M 0.976 PE 100 100 native 30.4 M 0.0 M 30.0 M 0.836 0.99 0.99 80.15 215 1.07 3.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc3a6292-946a-457f-adcc-06b98926577d/@@download/cross_correlation_plot/ENCFF175BPLENCFF517STJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB786OUA michael-snyder:L-2652 "ENCFF517STJ,ENCFF175BPL" HiSeq 2000 2017-01-31T17:52:25.732097+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xkqQ03692z6825GGykKjV ENCSR686SOV https://www.encodeproject.org/experiments/ENCSR686SOV transcription factor NCOA3-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF542LVJ https://www.encodeproject.org/files/ENCFF542LVJ/@@download/ENCFF542LVJ.bam ENCFF422VCP https://www.encodeproject.org/files/ENCFF422VCP/@@download/ENCFF422VCP.bam 59.4 M 0 57.5 M 0.969 PE 100 100 native 24.8 M 0.0 M 24.3 M 0.818 0.98 0.98 47.25 210 1.06 4.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/587861ad-ebf9-443f-874e-fa4fb32c3887/@@download/cross_correlation_plot/ENCFF771ONEENCFF840RUR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB726GJD michael-snyder:L-2649 "ENCFF840RUR,ENCFF771ONE" HiSeq 2000 2017-01-31T17:51:03.835259+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xp1j0369Fj1jXFYqzy0xp ENCSR686SOV https://www.encodeproject.org/experiments/ENCSR686SOV transcription factor NCOA3-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF188HPV https://www.encodeproject.org/files/ENCFF188HPV/@@download/ENCFF188HPV.bam ENCFF504RBI https://www.encodeproject.org/files/ENCFF504RBI/@@download/ENCFF504RBI.bam 69.5 M 0 67.6 M 0.974 PE 100 100 native 29.1 M 0.0 M 28.8 M 0.828 0.99 0.99 76.20 205 1.05 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/49c86a01-47de-45b5-ad36-12e9ed6c88b5/@@download/cross_correlation_plot/ENCFF899JCPENCFF722QNA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB812PJM michael-snyder:L-2650 "ENCFF722QNA,ENCFF899JCP" HiSeq 2000 2017-01-31T17:46:26.415185+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xp7j03690kQ9YFZ8Jf4kQ ENCSR006WUS https://www.encodeproject.org/experiments/ENCSR006WUS transcription factor NEUROD1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF309ZZR https://www.encodeproject.org/files/ENCFF309ZZR/@@download/ENCFF309ZZR.bam ENCFF243KJI https://www.encodeproject.org/files/ENCFF243KJI/@@download/ENCFF243KJI.bam 72.2 M 0 70.4 M 0.976 PE 100 100 native 30.5 M 0.0 M 28.9 M 0.800 0.95 0.95 18.32 195 1.07 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/c48d82b9-d6cc-4b25-8a6c-fb9b2200ef6f/@@download/cross_correlation_plot/ENCFF291XCZENCFF202GQI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB272RXD michael-snyder:L-1689 "ENCFF202GQI,ENCFF291XCZ" HiSeq 2000 2016-10-09T17:34:12.678068+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5x700jv1f6Kg8jbGjKZFq ENCSR006WUS https://www.encodeproject.org/experiments/ENCSR006WUS transcription factor NEUROD1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF721HMO https://www.encodeproject.org/files/ENCFF721HMO/@@download/ENCFF721HMO.bam ENCFF771NAV https://www.encodeproject.org/files/ENCFF771NAV/@@download/ENCFF771NAV.bam 41.5 M 0 40.4 M 0.974 PE 100 100 native 17.6 M 0.0 M 17.0 M 0.817 0.96 0.96 27.90 200 1.09 3.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/86cd3902-0e5d-4cd8-80bd-0c6970ddada6/@@download/cross_correlation_plot/ENCFF498MQFENCFF156UAQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB089AQO michael-snyder:L-1693 "ENCFF498MQF,ENCFF156UAQ" HiSeq 2000 2016-10-09T17:05:44.168825+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5x980jv1fvz446Zf2J5pp ENCSR582ZOA https://www.encodeproject.org/experiments/ENCSR582ZOA transcription factor NFIB-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF540GWM https://www.encodeproject.org/files/ENCFF540GWM/@@download/ENCFF540GWM.bam ENCFF950DZO https://www.encodeproject.org/files/ENCFF950DZO/@@download/ENCFF950DZO.bam 100.9 M 0 98.5 M 0.976 PE 100 100 native 42.5 M 0.0 M 41.1 M 0.815 0.97 0.97 30.42 210 1.12 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/af2b023a-55bc-4e9e-9e6f-c724ef650aa4/@@download/cross_correlation_plot/ENCFF091COJENCFF892KUR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB638RAR michael-snyder:L-2785 "ENCFF091COJ,ENCFF892KUR" HiSeq 2000 2017-01-31T17:49:58.476777+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28018Q036955b55FY24X5J6 ENCSR582ZOA https://www.encodeproject.org/experiments/ENCSR582ZOA transcription factor NFIB-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF565AIC https://www.encodeproject.org/files/ENCFF565AIC/@@download/ENCFF565AIC.bam ENCFF254TQA https://www.encodeproject.org/files/ENCFF254TQA/@@download/ENCFF254TQA.bam 73.9 M 0 71.9 M 0.973 PE 100 100 native 31.0 M 0.0 M 30.4 M 0.822 0.98 0.98 51.82 210 1.14 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac8bcc1f-36bd-4fd5-893c-24d896c4e5e7/@@download/cross_correlation_plot/ENCFF402HLRENCFF803NZA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB658QMK michael-snyder:L-2786 "ENCFF803NZA,ENCFF402HLR" HiSeq 2000 2017-01-31T17:46:09.450302+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2801K00369FB2f75bZ9VbVZ ENCSR248IMH https://www.encodeproject.org/experiments/ENCSR248IMH transcription factor NFRKB-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF422MGR https://www.encodeproject.org/files/ENCFF422MGR/@@download/ENCFF422MGR.bam ENCFF397HOV https://www.encodeproject.org/files/ENCFF397HOV/@@download/ENCFF397HOV.bam 67.9 M 0 66.5 M 0.980 PE 100 100 native 28.6 M 0.0 M 27.1 M 0.797 0.95 0.95 18.41 175 1.07 11.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ad5f39f-1364-498d-943b-388e649f259b/@@download/cross_correlation_plot/ENCFF616IVUENCFF157OJP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB421POK michael-snyder:L-3430 "ENCFF157OJP,ENCFF616IVU" HiSeq 4000 2017-05-05T22:00:28.827129+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469v5003698bkBg707zYXpX ENCSR248IMH https://www.encodeproject.org/experiments/ENCSR248IMH transcription factor NFRKB-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF276FCZ https://www.encodeproject.org/files/ENCFF276FCZ/@@download/ENCFF276FCZ.bam ENCFF042FPM https://www.encodeproject.org/files/ENCFF042FPM/@@download/ENCFF042FPM.bam 115.5 M 0 113.5 M 0.983 PE 100 100 native 49.4 M 0.0 M 44.5 M 0.771 0.90 0.90 9.89 160 1.05 5.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/76d1a41b-78b4-45c3-83f2-e423ff20c45c/@@download/cross_correlation_plot/ENCFF038CZCENCFF307UWA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB132WQV michael-snyder:L-3431 "ENCFF307UWA,ENCFF038CZC" HiSeq 4000 2017-05-06T01:40:10.112923+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469v8Q03698bkBg707zYXpx ENCSR135ANT https://www.encodeproject.org/experiments/ENCSR135ANT transcription factor NRF1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF132SYW https://www.encodeproject.org/files/ENCFF132SYW/@@download/ENCFF132SYW.bam ENCFF241NLT https://www.encodeproject.org/files/ENCFF241NLT/@@download/ENCFF241NLT.bam 52.3 M 0 51.2 M 0.978 PE 100 100 native 22.9 M 0.0 M 21.7 M 0.829 0.95 0.95 18.71 210 1.13 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f980f07-1ea6-439b-b259-40118cbe7014/@@download/cross_correlation_plot/ENCFF163OQMENCFF633IRT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB139AGY michael-snyder:L-359 "ENCFF163OQM,ENCFF633IRT" HiSeq 2000 2016-10-09T17:13:00.591058+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yxj0jv1f60PxyZ9JGP0P ENCSR135ANT https://www.encodeproject.org/experiments/ENCSR135ANT transcription factor NRF1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF767EZN https://www.encodeproject.org/files/ENCFF767EZN/@@download/ENCFF767EZN.bam ENCFF388CCA https://www.encodeproject.org/files/ENCFF388CCA/@@download/ENCFF388CCA.bam 81.6 M 0 79.3 M 0.971 PE 100 100 native 35.0 M 0.0 M 32.1 M 0.786 0.92 0.92 11.95 210 1.08 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/140c6649-9520-41df-a577-62f320da4a2c/@@download/cross_correlation_plot/ENCFF539DMVENCFF484GUE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB212AIR michael-snyder:L-153 "ENCFF484GUE,ENCFF539DMV" HiSeq 2000 2016-10-09T17:15:35.250311+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yz80jv1vY92b0GYjVFfP ENCSR442VBJ https://www.encodeproject.org/experiments/ENCSR442VBJ transcription factor RAD51-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF228WYN https://www.encodeproject.org/files/ENCFF228WYN/@@download/ENCFF228WYN.bam ENCFF619EIQ https://www.encodeproject.org/files/ENCFF619EIQ/@@download/ENCFF619EIQ.bam 74.2 M 0 55.3 M 0.745 PE 100 100 native 24.1 M 0.0 M 17.8 M 0.479 0.74 0.73 3.62 230 1.16 2.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/92539a4b-2ed8-43d4-b198-a42068edceac/@@download/cross_correlation_plot/ENCFF687ONIENCFF501ZOW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB885SCC michael-snyder:L-2716 "ENCFF687ONI,ENCFF501ZOW" HiSeq 2000 2017-04-09T00:00:40.740320+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z065Q0369KzxVxFKjfpJ7x ENCSR442VBJ https://www.encodeproject.org/experiments/ENCSR442VBJ transcription factor RAD51-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF351FEV https://www.encodeproject.org/files/ENCFF351FEV/@@download/ENCFF351FEV.bam ENCFF715ZZI https://www.encodeproject.org/files/ENCFF715ZZI/@@download/ENCFF715ZZI.bam 75.9 M 0 57.8 M 0.761 PE 100 100 native 25.2 M 0.0 M 18.8 M 0.494 0.74 0.74 3.65 230 1.14 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/d52446b2-2b95-4d39-8399-2f7bea34800e/@@download/cross_correlation_plot/ENCFF540YVRENCFF005ZXV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB907QEV michael-snyder:L-2717 "ENCFF005ZXV,ENCFF540YVR" HiSeq 2000 2017-04-09T00:00:59.614305+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z069j0369KzxVxFKjfpJ88 ENCSR788XNX https://www.encodeproject.org/experiments/ENCSR788XNX transcription factor RFX1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF804LEF https://www.encodeproject.org/files/ENCFF804LEF/@@download/ENCFF804LEF.bam ENCFF807YXR https://www.encodeproject.org/files/ENCFF807YXR/@@download/ENCFF807YXR.bam 76.2 M 0 49.2 M 0.645 PE 100 100 native 21.5 M 0.0 M 21.0 M 0.551 0.98 0.98 46.72 215 1.44 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/b54f4e93-8095-4338-948e-26d404f3b787/@@download/cross_correlation_plot/ENCFF364UFNENCFF601NHF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB614MWF michael-snyder:L-1812 "ENCFF364UFN,ENCFF601NHF" HiSeq 2000 2016-10-08T07:44:51.413811+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbK880jv1qz5v4z8X7v4xF ENCSR788XNX https://www.encodeproject.org/experiments/ENCSR788XNX transcription factor RFX1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF717YUB https://www.encodeproject.org/files/ENCFF717YUB/@@download/ENCFF717YUB.bam ENCFF430ZSU https://www.encodeproject.org/files/ENCFF430ZSU/@@download/ENCFF430ZSU.bam 45.2 M 0 44.0 M 0.974 PE 100 100 native 19.3 M 0.0 M 18.8 M 0.831 0.97 0.97 36.97 220 1.47 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f9b0e0a-59b7-42b3-99d9-69cb61214328/@@download/cross_correlation_plot/ENCFF806WBEENCFF541INS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB401WOW michael-snyder:L-1811 "ENCFF541INS,ENCFF806WBE" HiSeq 2000 2016-10-08T07:43:13.119357+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbKBQ0jv1k8Jzvv9Z4ZY2X ENCSR924TVL https://www.encodeproject.org/experiments/ENCSR924TVL transcription factor RFX5-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF243OVT https://www.encodeproject.org/files/ENCFF243OVT/@@download/ENCFF243OVT.bam ENCFF234MEE https://www.encodeproject.org/files/ENCFF234MEE/@@download/ENCFF234MEE.bam 69.1 M 0 67.3 M 0.975 PE 100 100 native 29.1 M 0.0 M 27.6 M 0.801 0.95 0.95 20.31 200 1.18 2.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/7217cc98-e007-436c-97d8-637c814a3e06/@@download/cross_correlation_plot/ENCFF002EHGENCFF002EHA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB797PRV michael-snyder:653_A_Tru-seq_CGATGT "ENCFF002EHG,ENCFF002EHA" HiSeq 2000 2016-10-29T18:06:33.748108+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29180jv1f68063VP6bfY4 ENCSR924TVL https://www.encodeproject.org/experiments/ENCSR924TVL transcription factor RFX5-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF689GLS https://www.encodeproject.org/files/ENCFF689GLS/@@download/ENCFF689GLS.bam ENCFF028JDJ https://www.encodeproject.org/files/ENCFF028JDJ/@@download/ENCFF028JDJ.bam 86.6 M 0 84.8 M 0.980 PE 100 100 native 38.0 M 0.0 M 36.1 M 0.834 0.95 0.95 20.12 200 1.15 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/72cbe719-f53c-43e8-b446-3152e767c8d0/@@download/cross_correlation_plot/ENCFF002DTWENCFF002DUG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB488YKU michael-snyder:653_B_Tru-seq_CGATGT "ENCFF002DUG,ENCFF002DTW" HiSeq 2000 2016-10-29T18:08:54.771052+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29400jv1pj2bF0JP9K2g0 ENCSR468LUO https://www.encodeproject.org/experiments/ENCSR468LUO transcription factor SIN3A-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF091EBR https://www.encodeproject.org/files/ENCFF091EBR/@@download/ENCFF091EBR.bam ENCFF933XIC https://www.encodeproject.org/files/ENCFF933XIC/@@download/ENCFF933XIC.bam 69.7 M 0 67.5 M 0.969 PE 100 100 native 29.1 M 0.0 M 28.3 M 0.812 0.97 0.97 36.67 210 1.14 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a754aa3-9282-4e91-9fee-cfe4fd425e42/@@download/cross_correlation_plot/ENCFF733YZZENCFF354HNG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB170VAD michael-snyder:L-391 "ENCFF354HNG,ENCFF733YZZ" HiSeq 2000 2016-10-09T17:08:34.785384+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Px80jv1zBYbxYJ5zzzVv ENCSR468LUO https://www.encodeproject.org/experiments/ENCSR468LUO transcription factor SIN3A-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF801GXY https://www.encodeproject.org/files/ENCFF801GXY/@@download/ENCFF801GXY.bam ENCFF007SAN https://www.encodeproject.org/files/ENCFF007SAN/@@download/ENCFF007SAN.bam 90.1 M 0 88.1 M 0.978 PE 100 100 native 38.8 M 0.0 M 37.0 M 0.822 0.96 0.96 22.14 170 1.13 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e6970bd-1317-48d1-97bf-c21f551c9a0a/@@download/cross_correlation_plot/ENCFF175HFFENCFF543HLG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB362YTD michael-snyder:L-133 "ENCFF175HFF,ENCFF543HLG" HiSeq 2000 2016-10-09T17:10:14.117276+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Pz00jv1zBYbxYJ5zzzX5 ENCSR487ASM https://www.encodeproject.org/experiments/ENCSR487ASM transcription factor SMARCA5-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF387SQL https://www.encodeproject.org/files/ENCFF387SQL/@@download/ENCFF387SQL.bam ENCFF476SLO https://www.encodeproject.org/files/ENCFF476SLO/@@download/ENCFF476SLO.bam 81.7 M 0 79.7 M 0.976 PE 100 100 native 34.5 M 0.0 M 31.9 M 0.781 0.92 0.92 12.79 140 1.07 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d5572dc-9d50-475c-b017-1f13f41d21d3/@@download/cross_correlation_plot/ENCFF316YEKENCFF512ION.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB091XAR michael-snyder:L-3494 "ENCFF512ION,ENCFF316YEK" HiSeq 4000 2017-06-06T18:18:39.425334+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Vj80369BkKBG9095vy1b ENCSR487ASM https://www.encodeproject.org/experiments/ENCSR487ASM transcription factor SMARCA5-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF800LNC https://www.encodeproject.org/files/ENCFF800LNC/@@download/ENCFF800LNC.bam ENCFF458MYQ https://www.encodeproject.org/files/ENCFF458MYQ/@@download/ENCFF458MYQ.bam 91.5 M 0 87.6 M 0.957 PE 100 100 native 37.3 M 0.0 M 33.9 M 0.742 0.91 0.91 10.73 135 1.07 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/08bc5c0b-2a4b-43fe-b797-db6e09f45547/@@download/cross_correlation_plot/ENCFF509CBVENCFF399MEA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB835DDD michael-snyder:L-3495 "ENCFF399MEA,ENCFF509CBV" HiSeq 4000 2017-06-06T18:19:27.930481+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Vp80369479pZ90bg9V0X ENCSR431TLD https://www.encodeproject.org/experiments/ENCSR431TLD transcription factor SMARCE1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF983CUE https://www.encodeproject.org/files/ENCFF983CUE/@@download/ENCFF983CUE.bam ENCFF477QAO https://www.encodeproject.org/files/ENCFF477QAO/@@download/ENCFF477QAO.bam 107.1 M 0 81.0 M 0.756 PE 100 100 native 33.4 M 0.0 M 23.8 M 0.445 0.71 0.71 3.27 130 1.11 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/a963416f-d229-40c5-8c74-f8df48dabb3a/@@download/cross_correlation_plot/ENCFF609XEGENCFF047GWH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB801SHR michael-snyder:L-3519 "ENCFF609XEG,ENCFF047GWH" HiSeq 4000 2017-06-23T02:11:14.256703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560YfQ0369Bx4kZ6Y9vzGVp ENCSR431TLD https://www.encodeproject.org/experiments/ENCSR431TLD transcription factor SMARCE1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF119JZC https://www.encodeproject.org/files/ENCFF119JZC/@@download/ENCFF119JZC.bam ENCFF912HMV https://www.encodeproject.org/files/ENCFF912HMV/@@download/ENCFF912HMV.bam 104.8 M 0 93.3 M 0.890 PE 100 100 native 40.1 M 0.0 M 25.9 M 0.495 0.65 0.63 2.56 155 1.10 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fa29b07-7905-472b-aed0-9c4213bce491/@@download/cross_correlation_plot/ENCFF734WRAENCFF600VBR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB707EET michael-snyder:L-3520 "ENCFF734WRA,ENCFF600VBR" HiSeq 4000 2017-06-23T02:19:01.906226+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Yp00369FxjJB131Zqf4v ENCSR042TWZ https://www.encodeproject.org/experiments/ENCSR042TWZ "RNA binding protein,transcription factor" SNIP1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF322EWP https://www.encodeproject.org/files/ENCFF322EWP/@@download/ENCFF322EWP.bam ENCFF515MJS https://www.encodeproject.org/files/ENCFF515MJS/@@download/ENCFF515MJS.bam 71.3 M 0 49.4 M 0.692 PE 100 100 native 20.9 M 0.0 M 14.1 M 0.397 0.68 0.67 2.94 225 1.12 4.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/6baaae54-7266-4c5c-9c93-a5794ea7474c/@@download/cross_correlation_plot/ENCFF801JGPENCFF671RFK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB091BWC michael-snyder:L-2722 "ENCFF671RFK,ENCFF801JGP" HiSeq 4000 2016-09-16T03:18:24.790402+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyp8Q036903vFQkJzV6Pq3 ENCSR042TWZ https://www.encodeproject.org/experiments/ENCSR042TWZ "RNA binding protein,transcription factor" SNIP1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF942GSX https://www.encodeproject.org/files/ENCFF942GSX/@@download/ENCFF942GSX.bam ENCFF186TEA https://www.encodeproject.org/files/ENCFF186TEA/@@download/ENCFF186TEA.bam 93.4 M 0 81.3 M 0.870 PE 100 100 native 34.7 M 0.0 M 29.3 M 0.628 0.85 0.84 6.26 230 1.06 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/2acba4b1-2af4-4123-bdda-a0b3ad2541ff/@@download/cross_correlation_plot/ENCFF418JIMENCFF088PAW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB844GWF michael-snyder:L-2723 "ENCFF088PAW,ENCFF418JIM" HiSeq 4000 2016-09-16T03:20:34.812879+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypF803690qG5Zzk84B8Yf ENCSR729LGA https://www.encodeproject.org/experiments/ENCSR729LGA transcription factor SP1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF924HNJ https://www.encodeproject.org/files/ENCFF924HNJ/@@download/ENCFF924HNJ.bam ENCFF069JDL https://www.encodeproject.org/files/ENCFF069JDL/@@download/ENCFF069JDL.bam 61.0 M 0 59.5 M 0.976 PE 100 100 native 25.9 M 0.0 M 24.5 M 0.805 0.95 0.95 19.24 210 1.06 4.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1d74a56-fbff-45e7-b4e2-e62d55bbee26/@@download/cross_correlation_plot/ENCFF957SQSENCFF582IOZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB637LZP michael-snyder:L-1714 "ENCFF957SQS,ENCFF582IOZ" HiSeq 2000 2016-10-09T17:10:55.568777+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pK80jv1vY92b0GYjVFXb ENCSR729LGA https://www.encodeproject.org/experiments/ENCSR729LGA transcription factor SP1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF063JBE https://www.encodeproject.org/files/ENCFF063JBE/@@download/ENCFF063JBE.bam ENCFF702CUS https://www.encodeproject.org/files/ENCFF702CUS/@@download/ENCFF702CUS.bam 60.0 M 0 58.6 M 0.976 PE 100 100 native 25.2 M 0.0 M 23.9 M 0.796 0.95 0.95 18.65 220 1.06 4.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/c53b9def-26ba-448e-b36a-f00b37673677/@@download/cross_correlation_plot/ENCFF330MCZENCFF293YFE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB568IYX michael-snyder:L-1715 "ENCFF293YFE,ENCFF330MCZ" HiSeq 2000 2016-10-09T17:10:24.127621+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pQ00jv1xPyfX78Yz4gVZ ENCSR197DJH https://www.encodeproject.org/experiments/ENCSR197DJH transcription factor SREBF1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF774XPS https://www.encodeproject.org/files/ENCFF774XPS/@@download/ENCFF774XPS.bam ENCFF302QWW https://www.encodeproject.org/files/ENCFF302QWW/@@download/ENCFF302QWW.bam 67.3 M 0 66.6 M 0.990 PE 100 100 native 29.9 M 0.0 M 26.8 M 0.798 0.90 0.90 9.46 245 1.07 7.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bc5fae8-6e49-4d6e-b060-bda9dadb9b5f/@@download/cross_correlation_plot/ENCFF424HPQENCFF217JJM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB496FAI michael-snyder:L-374 "ENCFF217JJM,ENCFF424HPQ" HiSeq 2000 2016-10-09T17:10:50.205866+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3p6Q0jv1QxJBfj5Zb2pJP ENCSR197DJH https://www.encodeproject.org/experiments/ENCSR197DJH transcription factor SREBF1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF008QCI https://www.encodeproject.org/files/ENCFF008QCI/@@download/ENCFF008QCI.bam ENCFF117PKO https://www.encodeproject.org/files/ENCFF117PKO/@@download/ENCFF117PKO.bam 97.2 M 0 95.8 M 0.985 PE 100 100 native 42.9 M 0.0 M 38.7 M 0.796 0.90 0.90 10.13 215 1.06 4.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bdf9d39-eff6-42dd-969a-1ee5d5f60eb9/@@download/cross_correlation_plot/ENCFF829LELENCFF168ZLV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB133NHZ michael-snyder:L-378 "ENCFF168ZLV,ENCFF829LEL" HiSeq 2000 2016-10-09T17:14:29.066303+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3p800jv1XvFGkBjjfjPzv ENCSR757EMK https://www.encodeproject.org/experiments/ENCSR757EMK "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF215SUP https://www.encodeproject.org/files/ENCFF215SUP/@@download/ENCFF215SUP.bam ENCFF438QZX https://www.encodeproject.org/files/ENCFF438QZX/@@download/ENCFF438QZX.bam 84.6 M 0 82.1 M 0.970 PE 100 100 native 35.2 M 0.0 M 33.8 M 0.798 0.96 0.96 24.80 195 1.11 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae0e51b9-55c2-48e0-8a1c-6bef0ba79f92/@@download/cross_correlation_plot/ENCFF833EZXENCFF161HBP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB552ACZ michael-snyder:L-1704 "ENCFF161HBP,ENCFF833EZX" HiSeq 2000 2017-05-05T11:49:01.628095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvV803698KGf370q972jp ENCSR757EMK https://www.encodeproject.org/experiments/ENCSR757EMK "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF661TCZ https://www.encodeproject.org/files/ENCFF661TCZ/@@download/ENCFF661TCZ.bam ENCFF176PAY https://www.encodeproject.org/files/ENCFF176PAY/@@download/ENCFF176PAY.bam 73.8 M 0 71.8 M 0.974 PE 100 100 native 30.7 M 0.0 M 29.8 M 0.809 0.97 0.97 34.26 205 1.07 3.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/312ad034-4556-48e3-b5af-2b9e84741d72/@@download/cross_correlation_plot/ENCFF776KZUENCFF119KHM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB872TQR michael-snyder:L-1705 "ENCFF776KZU,ENCFF119KHM" HiSeq 2000 2017-05-05T10:48:27.826699+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvb00369JxZVj70Jj06G2 ENCSR801SWX https://www.encodeproject.org/experiments/ENCSR801SWX "RNA binding protein,transcription factor" TARDBP-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF401VIW https://www.encodeproject.org/files/ENCFF401VIW/@@download/ENCFF401VIW.bam ENCFF986CIE https://www.encodeproject.org/files/ENCFF986CIE/@@download/ENCFF986CIE.bam 64.9 M 0 58.7 M 0.905 PE 100 100 native 25.3 M 0.0 M 24.2 M 0.748 0.96 0.96 23.86 215 1.06 3.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ffa3e33-50a0-406e-b16d-be4c69fb0c9a/@@download/cross_correlation_plot/ENCFF608KPIENCFF247EXO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB525YCO michael-snyder:L-2742 "ENCFF247EXO,ENCFF608KPI" HiSeq 2000 2017-01-31T17:44:52.936271+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2802G0036916Fvj5gQ7X6ZQ ENCSR801SWX https://www.encodeproject.org/experiments/ENCSR801SWX "RNA binding protein,transcription factor" TARDBP-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF369JAU https://www.encodeproject.org/files/ENCFF369JAU/@@download/ENCFF369JAU.bam ENCFF550GMK https://www.encodeproject.org/files/ENCFF550GMK/@@download/ENCFF550GMK.bam 63.5 M 0 55.0 M 0.866 PE 100 100 native 23.7 M 0.0 M 22.2 M 0.699 0.94 0.94 15.72 200 1.09 2.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/1afe559f-4d9f-4a20-8ac2-f4be911f4ce7/@@download/cross_correlation_plot/ENCFF651TLLENCFF598JRF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285IQF michael-snyder:L-2743 "ENCFF651TLL,ENCFF598JRF" HiSeq 2000 2017-01-31T17:44:20.574598+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2802XQ0369654jBFY5X6zZz ENCSR810WXH https://www.encodeproject.org/experiments/ENCSR810WXH RNA binding protein TOE1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF469VIO https://www.encodeproject.org/files/ENCFF469VIO/@@download/ENCFF469VIO.bam ENCFF524GMH https://www.encodeproject.org/files/ENCFF524GMH/@@download/ENCFF524GMH.bam 91.8 M 0 85.0 M 0.926 PE 100 100 native 37.0 M 0.0 M 28.2 M 0.613 0.76 0.76 3.97 170 1.13 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8187ea0-0afe-492a-bc84-6b5518f37597/@@download/cross_correlation_plot/ENCFF090VYSENCFF615TCI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB113WLR michael-snyder:L-3521 "ENCFF615TCI,ENCFF090VYS" HiSeq 4000 2017-06-23T02:13:33.574898+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Yy003690pK5y12gF63pj ENCSR810WXH https://www.encodeproject.org/experiments/ENCSR810WXH RNA binding protein TOE1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF369YRT https://www.encodeproject.org/files/ENCFF369YRT/@@download/ENCFF369YRT.bam ENCFF248JTU https://www.encodeproject.org/files/ENCFF248JTU/@@download/ENCFF248JTU.bam 99.7 M 0 95.7 M 0.960 PE 100 100 native 42.0 M 0.0 M 31.0 M 0.621 0.74 0.73 3.55 180 1.15 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/21a09c78-a4b4-4a90-881f-ff09ea8309c5/@@download/cross_correlation_plot/ENCFF300ZSDENCFF361XMH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB804MJB michael-snyder:L-3522 "ENCFF361XMH,ENCFF300ZSD" HiSeq 4000 2017-06-23T02:45:16.544401+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Z18036926gYv12YX8qZ6 ENCSR875PEI https://www.encodeproject.org/experiments/ENCSR875PEI transcription factor TRIM22-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF488QXW https://www.encodeproject.org/files/ENCFF488QXW/@@download/ENCFF488QXW.bam ENCFF471MSL https://www.encodeproject.org/files/ENCFF471MSL/@@download/ENCFF471MSL.bam 116.2 M 0 88.1 M 0.758 PE 100 100 native 37.8 M 0.0 M 27.1 M 0.466 0.72 0.72 3.48 225 1.10 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/2208d3f6-4037-4abb-b3eb-dd3d50ce32ad/@@download/cross_correlation_plot/ENCFF245FGQENCFF687NYU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB434BNT michael-snyder:L-2724 "ENCFF687NYU,ENCFF245FGQ" HiSeq 4000 2016-09-16T03:23:19.576711+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyb08036903vFQkJzV6PkZ ENCSR875PEI https://www.encodeproject.org/experiments/ENCSR875PEI transcription factor TRIM22-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF487INY https://www.encodeproject.org/files/ENCFF487INY/@@download/ENCFF487INY.bam ENCFF872QZS https://www.encodeproject.org/files/ENCFF872QZS/@@download/ENCFF872QZS.bam 129.8 M 0 122.2 M 0.942 PE 100 100 native 52.1 M 0.0 M 49.9 M 0.769 0.96 0.96 23.90 195 1.04 2.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/61629b96-eda6-4b7a-a53a-574a0046fe91/@@download/cross_correlation_plot/ENCFF757IFMENCFF741DCI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB794GWZ michael-snyder:L-2725 "ENCFF757IFM,ENCFF741DCI" HiSeq 4000 2016-09-16T03:25:55.588110+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyb380369B06vx3GQPgx77 ENCSR454DRR https://www.encodeproject.org/experiments/ENCSR454DRR "transcription factor,chromatin remodeller" UTY-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF208DCW https://www.encodeproject.org/files/ENCFF208DCW/@@download/ENCFF208DCW.bam ENCFF860DQH https://www.encodeproject.org/files/ENCFF860DQH/@@download/ENCFF860DQH.bam 184.2 M 0 174.4 M 0.947 PE 100 100 native 74.3 M 0.0 M 70.6 M 0.767 0.95 0.95 19.94 235 1.03 2.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/00f271d6-3905-4bc4-8787-2646c74e4f4e/@@download/cross_correlation_plot/ENCFF773JUAENCFF155FVF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB326HTI michael-snyder:L-2744 "ENCFF155FVF,ENCFF773JUA" HiSeq 4000 2016-09-16T03:30:15.406870+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGykYQ0369BP06Yb0qGVZJx ENCSR454DRR https://www.encodeproject.org/experiments/ENCSR454DRR "transcription factor,chromatin remodeller" UTY-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF108XJU https://www.encodeproject.org/files/ENCFF108XJU/@@download/ENCFF108XJU.bam ENCFF511HAN https://www.encodeproject.org/files/ENCFF511HAN/@@download/ENCFF511HAN.bam 97.7 M 0 82.4 M 0.843 PE 100 100 native 34.8 M 0.0 M 30.3 M 0.621 0.87 0.87 7.52 240 1.05 3.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7ccb68d-8ea7-4fa2-824a-b872ca088491/@@download/cross_correlation_plot/ENCFF935RYLENCFF989DMG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB689OTJ michael-snyder:L-2745 "ENCFF989DMG,ENCFF935RYL" HiSeq 4000 2016-09-16T03:20:09.952302+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGykf00369JpJK47VQg9x47 ENCSR864KNH https://www.encodeproject.org/experiments/ENCSR864KNH "RNA binding protein,transcription factor" YBX1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF864YTK https://www.encodeproject.org/files/ENCFF864YTK/@@download/ENCFF864YTK.bam ENCFF177PYK https://www.encodeproject.org/files/ENCFF177PYK/@@download/ENCFF177PYK.bam 129.1 M 0 118.3 M 0.917 PE 100 100 native 49.7 M 0.0 M 46.3 M 0.718 0.93 0.93 14.82 220 1.04 2.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/740ccdb1-e40c-4af4-993c-14447b6b5e15/@@download/cross_correlation_plot/ENCFF590KVSENCFF447OXS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB933MVO michael-snyder:L-2746 "ENCFF447OXS,ENCFF590KVS" HiSeq 4000 2016-09-16T03:23:56.083214+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypvj03696Pxzk584jfj50 ENCSR864KNH https://www.encodeproject.org/experiments/ENCSR864KNH "RNA binding protein,transcription factor" YBX1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF931LRP https://www.encodeproject.org/files/ENCFF931LRP/@@download/ENCFF931LRP.bam ENCFF874VDD https://www.encodeproject.org/files/ENCFF874VDD/@@download/ENCFF874VDD.bam 119.5 M 0 109.8 M 0.919 PE 100 100 native 46.3 M 0.0 M 43.5 M 0.728 0.94 0.94 16.21 220 1.04 2.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a8dcaa1-acb0-4b4b-acd2-43fd8d6a5c13/@@download/cross_correlation_plot/ENCFF577YSBENCFF562IQT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB127POU michael-snyder:L-2747 "ENCFF577YSB,ENCFF562IQT" HiSeq 4000 2016-09-16T03:23:00.923801+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypzj036954vKPp0b3gGV3 ENCSR056SZJ https://www.encodeproject.org/experiments/ENCSR056SZJ transcription factor ZBTB2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF618ZWQ https://www.encodeproject.org/files/ENCFF618ZWQ/@@download/ENCFF618ZWQ.bam ENCFF942SNI https://www.encodeproject.org/files/ENCFF942SNI/@@download/ENCFF942SNI.bam 82.5 M 0 80.0 M 0.970 PE 100 100 native 34.6 M 0.0 M 32.8 M 0.795 0.95 0.95 18.59 140 1.09 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5dd0f30-c309-4f1f-8d5d-aeb0fa5afa82/@@download/cross_correlation_plot/ENCFF344WVGENCFF512TIZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB627HJP michael-snyder:L-3474 "ENCFF344WVG,ENCFF512TIZ" HiSeq 4000 2017-06-16T03:16:38.633531+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KGy003697YG8J159078XP ENCSR056SZJ https://www.encodeproject.org/experiments/ENCSR056SZJ transcription factor ZBTB2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF041KVP https://www.encodeproject.org/files/ENCFF041KVP/@@download/ENCFF041KVP.bam ENCFF942UHR https://www.encodeproject.org/files/ENCFF942UHR/@@download/ENCFF942UHR.bam 108.4 M 0 104.5 M 0.963 PE 100 100 native 45.5 M 0.0 M 41.3 M 0.762 0.91 0.91 10.65 155 1.19 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/088a19bf-042a-45ef-ab33-0e118f714160/@@download/cross_correlation_plot/ENCFF628ZGRENCFF796TZT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB327RTK michael-snyder:L-3475 "ENCFF628ZGR,ENCFF796TZT" HiSeq 4000 2017-06-16T06:10:23.466024+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KJ1Q0369J56xV165K4GYJ ENCSR902IZF https://www.encodeproject.org/experiments/ENCSR902IZF transcription factor ZBTB21-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF042RFI https://www.encodeproject.org/files/ENCFF042RFI/@@download/ENCFF042RFI.bam ENCFF283VIA https://www.encodeproject.org/files/ENCFF283VIA/@@download/ENCFF283VIA.bam 106.0 M 0 79.9 M 0.754 PE 100 100 native 34.2 M 0.0 M 31.9 M 0.601 0.93 0.93 14.79 210 1.10 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/02f7848f-bc64-43ac-a39c-b6ab1cfb8097/@@download/cross_correlation_plot/ENCFF725JQJENCFF777XUU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB151BMX michael-snyder:L-2249 "ENCFF725JQJ,ENCFF777XUU" HiSeq 4000 2016-09-16T03:21:13.446570+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXJj0369F7KPkXGKbg6PJ ENCSR902IZF https://www.encodeproject.org/experiments/ENCSR902IZF transcription factor ZBTB21-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF091KRN https://www.encodeproject.org/files/ENCFF091KRN/@@download/ENCFF091KRN.bam ENCFF213MNH https://www.encodeproject.org/files/ENCFF213MNH/@@download/ENCFF213MNH.bam 121.5 M 0 114.5 M 0.943 PE 100 100 native 48.4 M 0.0 M 20.8 M 0.343 0.43 0.45 1.87 255 1.08 4.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c8d8343-5d52-47e4-9122-5bde60bb970f/@@download/cross_correlation_plot/ENCFF761NHPENCFF567CAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB955NXL michael-snyder:L-2250 "ENCFF761NHP,ENCFF567CAY" HiSeq 4000 2016-09-16T03:21:38.455870+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXQQ036945x1X1GjJQPyb ENCSR231YFE https://www.encodeproject.org/experiments/ENCSR231YFE transcription factor ZBTB33-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF696RXB https://www.encodeproject.org/files/ENCFF696RXB/@@download/ENCFF696RXB.bam ENCFF093IGV https://www.encodeproject.org/files/ENCFF093IGV/@@download/ENCFF093IGV.bam 53.6 M 0 51.7 M 0.964 PE 100 100 native 21.4 M 0.0 M 20.8 M 0.778 0.97 0.97 36.47 190 1.08 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a4045cf-ab73-4b0a-8b19-43912ae053c2/@@download/cross_correlation_plot/ENCFF279UPHENCFF031HGS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB020AHW michael-snyder:L-3028 "ENCFF279UPH,ENCFF031HGS" HiSeq 2000 2016-10-27T22:30:39.506025+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bf6Q0369BX1xqb1B80vQG ENCSR231YFE https://www.encodeproject.org/experiments/ENCSR231YFE transcription factor ZBTB33-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF455ZKM https://www.encodeproject.org/files/ENCFF455ZKM/@@download/ENCFF455ZKM.bam ENCFF426VJL https://www.encodeproject.org/files/ENCFF426VJL/@@download/ENCFF426VJL.bam 90.8 M 0 87.3 M 0.961 PE 100 100 native 36.1 M 0.0 M 34.3 M 0.754 0.95 0.95 19.75 180 1.06 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/9875e233-5fb3-4040-a470-231954aa90b5/@@download/cross_correlation_plot/ENCFF748NXLENCFF030BFQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB455BDY michael-snyder:L-3029 "ENCFF748NXL,ENCFF030BFQ" HiSeq 2000 2016-10-27T22:34:53.060919+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfB00369PQyG3V5B4502V ENCSR277BXW https://www.encodeproject.org/experiments/ENCSR277BXW transcription factor ZBTB7B-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF338ZSU https://www.encodeproject.org/files/ENCFF338ZSU/@@download/ENCFF338ZSU.bam ENCFF934IMS https://www.encodeproject.org/files/ENCFF934IMS/@@download/ENCFF934IMS.bam 60.4 M 0 59.0 M 0.976 PE 100 100 native 25.6 M 0.0 M 25.1 M 0.833 0.98 0.98 54.46 235 1.05 3.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/3753678e-5d2a-4dec-bd59-15e0df233771/@@download/cross_correlation_plot/ENCFF605PXJENCFF815CWB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB310LPG michael-snyder:L-1876 "ENCFF605PXJ,ENCFF815CWB" HiSeq 2000 2016-10-09T17:31:31.916095+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64PQ0jv1q5825v91XY30v ENCSR277BXW https://www.encodeproject.org/experiments/ENCSR277BXW transcription factor ZBTB7B-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF962EFL https://www.encodeproject.org/files/ENCFF962EFL/@@download/ENCFF962EFL.bam ENCFF896ZIV https://www.encodeproject.org/files/ENCFF896ZIV/@@download/ENCFF896ZIV.bam 63.6 M 0 62.1 M 0.976 PE 100 100 native 27.0 M 0.0 M 26.0 M 0.817 0.96 0.96 28.01 225 1.06 3.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc40d83e-0da8-4172-8331-433d9c0f23db/@@download/cross_correlation_plot/ENCFF662WYCENCFF527JAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB425YMK michael-snyder:L-1877 "ENCFF662WYC,ENCFF527JAY" HiSeq 2000 2016-10-09T17:31:15.495261+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64Vj0jv1Y68V4KG8yz38b ENCSR435OQD https://www.encodeproject.org/experiments/ENCSR435OQD transcription factor ZFX-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF975MPZ https://www.encodeproject.org/files/ENCFF975MPZ/@@download/ENCFF975MPZ.bam ENCFF328JLG https://www.encodeproject.org/files/ENCFF328JLG/@@download/ENCFF328JLG.bam 135.7 M 0 132.3 M 0.975 PE 100 100 native 56.0 M 0.0 M 53.6 M 0.789 0.96 0.96 22.87 280 1.07 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6d16758-fcd2-484a-ad50-179e97a11019/@@download/cross_correlation_plot/ENCFF803FBHENCFF935CXJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830EDJ michael-snyder:L-2691 "ENCFF935CXJ,ENCFF803FBH" HiSeq 2000 2017-03-23T18:22:08.334843+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QBBj0369864P9PK7v9G8F ENCSR435OQD https://www.encodeproject.org/experiments/ENCSR435OQD transcription factor ZFX-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF357KDK https://www.encodeproject.org/files/ENCFF357KDK/@@download/ENCFF357KDK.bam ENCFF240MZI https://www.encodeproject.org/files/ENCFF240MZI/@@download/ENCFF240MZI.bam 121.2 M 0 118.4 M 0.977 PE 100 100 native 49.5 M 0.0 M 47.1 M 0.777 0.95 0.95 20.55 325 1.18 2.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/498653d3-8409-455c-b9b6-f830251259b0/@@download/cross_correlation_plot/ENCFF857WNFENCFF855KRX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB914ZWE michael-snyder:L-3092 "ENCFF855KRX,ENCFF857WNF" HiSeq 2000 2017-03-23T18:20:10.620254+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QBf00369B0FK23GVp4K7b ENCSR449UFF https://www.encodeproject.org/experiments/ENCSR449UFF transcription factor ZKSCAN1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF442WFR https://www.encodeproject.org/files/ENCFF442WFR/@@download/ENCFF442WFR.bam ENCFF571UYJ https://www.encodeproject.org/files/ENCFF571UYJ/@@download/ENCFF571UYJ.bam 52.5 M 0 50.9 M 0.970 PE 100 100 native 21.9 M 0.0 M 21.6 M 0.823 0.99 0.99 86.65 200 1.07 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/d666edb0-4594-445f-961e-3b9edf80697b/@@download/cross_correlation_plot/ENCFF019YFWENCFF904VSC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB393KRV michael-snyder:L-1780 "ENCFF904VSC,ENCFF019YFW" HiSeq 2000 2016-10-09T17:03:26.099883+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BY00jv1zBYbxYJ5zzzK3 ENCSR449UFF https://www.encodeproject.org/experiments/ENCSR449UFF transcription factor ZKSCAN1-human MCF-7 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF023VUT https://www.encodeproject.org/files/ENCFF023VUT/@@download/ENCFF023VUT.bam ENCFF346ZCU https://www.encodeproject.org/files/ENCFF346ZCU/@@download/ENCFF346ZCU.bam 67.4 M 0 65.6 M 0.973 PE 100 100 native 28.2 M 0.0 M 27.9 M 0.827 0.99 0.99 96.63 185 1.07 3.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c3fa3c0-1bb9-476b-b509-78b526fb102b/@@download/cross_correlation_plot/ENCFF133BYLENCFF173ENM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB834TZE michael-snyder:L-1781 "ENCFF173ENM,ENCFF133BYL" HiSeq 2000 2016-10-09T17:04:04.117691+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BZQ0jv1xPyfX78Yz4j5f ENCSR096KWU https://www.encodeproject.org/experiments/ENCSR096KWU transcription factor ZNF207-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF796TBS https://www.encodeproject.org/files/ENCFF796TBS/@@download/ENCFF796TBS.bam ENCFF844SGC https://www.encodeproject.org/files/ENCFF844SGC/@@download/ENCFF844SGC.bam 55.4 M 0 53.6 M 0.967 PE 100 100 native 23.1 M 0.0 M 22.7 M 0.819 0.98 0.98 65.29 195 1.07 2.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/c339f8bf-df58-4025-8954-e6ba5052af6f/@@download/cross_correlation_plot/ENCFF233LBLENCFF724EXA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB364HTU michael-snyder:L-1782 "ENCFF233LBL,ENCFF724EXA" HiSeq 2000 2016-10-09T17:36:54.804852+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5xzQ0jv1Y68V4KG8yz380 ENCSR096KWU https://www.encodeproject.org/experiments/ENCSR096KWU transcription factor ZNF207-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF116HSG https://www.encodeproject.org/files/ENCFF116HSG/@@download/ENCFF116HSG.bam ENCFF866FUF https://www.encodeproject.org/files/ENCFF866FUF/@@download/ENCFF866FUF.bam 57.9 M 0 56.7 M 0.978 PE 100 100 native 24.5 M 0.0 M 24.3 M 0.840 0.99 0.99 135.27 210 1.06 3.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/88bb9f15-d099-415f-9293-d957da02b480/@@download/cross_correlation_plot/ENCFF563WERENCFF371HTE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB512EHJ michael-snyder:L-1783 "ENCFF371HTE,ENCFF563WER" HiSeq 2000 2016-10-09T17:37:05.533127+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5y1j0jv1X056bqGfgGfb8 ENCSR465XQW https://www.encodeproject.org/experiments/ENCSR465XQW transcription factor ZNF217-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF199VCV https://www.encodeproject.org/files/ENCFF199VCV/@@download/ENCFF199VCV.bam ENCFF588LHY https://www.encodeproject.org/files/ENCFF588LHY/@@download/ENCFF588LHY.bam 99.9 M 0 76.5 M 0.766 PE 100 100 native 31.8 M 0.0 M 25.4 M 0.509 0.80 0.80 4.91 255 1.13 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/d48cb8d9-1948-4d60-8dbb-ec253bd99ddc/@@download/cross_correlation_plot/ENCFF601NIYENCFF888GKN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB723ZDU michael-snyder:L-2255 "ENCFF888GKN,ENCFF601NIY" HiSeq 4000 2016-09-16T03:15:50.732022+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz16Q036994Jx4PVBXKY3b ENCSR465XQW https://www.encodeproject.org/experiments/ENCSR465XQW transcription factor ZNF217-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF759ASI https://www.encodeproject.org/files/ENCFF759ASI/@@download/ENCFF759ASI.bam ENCFF715SDB https://www.encodeproject.org/files/ENCFF715SDB/@@download/ENCFF715SDB.bam 136.4 M 0 103.1 M 0.756 PE 100 100 native 43.4 M 0.0 M 34.4 M 0.504 0.79 0.79 4.73 230 1.14 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/61592627-cccb-4648-a360-c9316d120e8f/@@download/cross_correlation_plot/ENCFF263XLBENCFF064VKS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB704GUZ michael-snyder:L-2248 "ENCFF263XLB,ENCFF064VKS" HiSeq 4000 2016-09-16T03:19:38.655596+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz1980369Fv9Fbyj2z3Q90 ENCSR912ATU https://www.encodeproject.org/experiments/ENCSR912ATU transcription factor ZNF217-human MCF-7 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR503VTG https://www.encodeproject.org/experiments/ENCSR503VTG transcription factor ZNF24-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF639VBS https://www.encodeproject.org/files/ENCFF639VBS/@@download/ENCFF639VBS.bam ENCFF595KXD https://www.encodeproject.org/files/ENCFF595KXD/@@download/ENCFF595KXD.bam 80.7 M 0 78.5 M 0.973 PE 100 100 native 33.9 M 0.0 M 26.3 M 0.651 0.77 0.77 4.26 195 1.09 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b2f2317-d4e8-4a9b-ac85-e88aa8138560/@@download/cross_correlation_plot/ENCFF278ZXIENCFF280IXK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB748LRN michael-snyder:L-3523 "ENCFF280IXK,ENCFF278ZXI" HiSeq 4000 2017-06-23T01:31:00.406981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Z58036926gYv12YX8qZZ ENCSR503VTG https://www.encodeproject.org/experiments/ENCSR503VTG transcription factor ZNF24-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF618WHB https://www.encodeproject.org/files/ENCFF618WHB/@@download/ENCFF618WHB.bam ENCFF065WCR https://www.encodeproject.org/files/ENCFF065WCR/@@download/ENCFF065WCR.bam 77.4 M 0 72.3 M 0.934 PE 100 100 native 31.2 M 0.0 M 24.8 M 0.642 0.80 0.79 4.73 165 1.13 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/44d9e636-d695-4ccb-885b-5d69cb4526af/@@download/cross_correlation_plot/ENCFF037HQZENCFF720YIW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB321RWL michael-snyder:L-3524 "ENCFF720YIW,ENCFF037HQZ" HiSeq 4000 2017-06-23T01:26:20.470102+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Z8Q03693K5yx0Yf7v9vZ ENCSR835ESB https://www.encodeproject.org/experiments/ENCSR835ESB transcription factor ZNF444-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF667XAK https://www.encodeproject.org/files/ENCFF667XAK/@@download/ENCFF667XAK.bam ENCFF193JRE https://www.encodeproject.org/files/ENCFF193JRE/@@download/ENCFF193JRE.bam 135.1 M 0 105.6 M 0.782 PE 100 100 native 45.3 M 0.0 M 43.3 M 0.641 0.96 0.96 22.51 220 1.05 2.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae27cf21-ed7a-41d0-ae77-9c686d176164/@@download/cross_correlation_plot/ENCFF762MTEENCFF224VNC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB622SCV michael-snyder:L-2243 "ENCFF762MTE,ENCFF224VNC" HiSeq 4000 2016-09-16T03:18:33.822139+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz100036994Jx4PVBXKY3B ENCSR835ESB https://www.encodeproject.org/experiments/ENCSR835ESB transcription factor ZNF444-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF854PVW https://www.encodeproject.org/files/ENCFF854PVW/@@download/ENCFF854PVW.bam ENCFF876MDP https://www.encodeproject.org/files/ENCFF876MDP/@@download/ENCFF876MDP.bam 101.3 M 0 96.1 M 0.948 PE 100 100 native 40.8 M 0.0 M 16.5 M 0.326 0.40 0.43 1.87 260 1.09 5.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6133c82-8cd0-432b-b4ea-3b6cabdeba46/@@download/cross_correlation_plot/ENCFF184PNRENCFF855UDR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB519HGB michael-snyder:L-2244 "ENCFF184PNR,ENCFF855UDR" HiSeq 4000 2016-09-16T03:14:08.351769+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz1300369BvpJbQkBjPZZY ENCSR419ODQ https://www.encodeproject.org/experiments/ENCSR419ODQ transcription factor ZNF507-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF742OPD https://www.encodeproject.org/files/ENCFF742OPD/@@download/ENCFF742OPD.bam ENCFF770FZZ https://www.encodeproject.org/files/ENCFF770FZZ/@@download/ENCFF770FZZ.bam 97.7 M 0 91.5 M 0.936 PE 100 100 native 39.2 M 0.0 M 10.8 M 0.222 0.28 0.30 1.53 245 1.16 4.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/77e9a3a1-c797-4f6d-a58f-564fec7a77e0/@@download/cross_correlation_plot/ENCFF449ZXLENCFF393VCX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB990PKB michael-snyder:L-2254 "ENCFF393VCX,ENCFF449ZXL" HiSeq 4000 2016-09-16T03:18:24.306910+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyk4j03696Pxzk584jfj49 ENCSR419ODQ https://www.encodeproject.org/experiments/ENCSR419ODQ transcription factor ZNF507-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF413DPP https://www.encodeproject.org/files/ENCFF413DPP/@@download/ENCFF413DPP.bam ENCFF433UQY https://www.encodeproject.org/files/ENCFF433UQY/@@download/ENCFF433UQY.bam 85.6 M 0 82.2 M 0.960 PE 100 100 native 35.2 M 0.0 M 32.4 M 0.758 0.92 0.92 12.84 220 1.08 2.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/836932f7-908f-425a-823e-6f530d5f3711/@@download/cross_correlation_plot/ENCFF732NSKENCFF808UIH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB719YVP michael-snyder:L-2630 "ENCFF732NSK,ENCFF808UIH" HiSeq 4000 2016-09-16T03:20:07.875285+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyk880369GZQjPPJb6P0gZ ENCSR555DCF https://www.encodeproject.org/experiments/ENCSR555DCF transcription factor ZNF512B-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF306BMN https://www.encodeproject.org/files/ENCFF306BMN/@@download/ENCFF306BMN.bam ENCFF560RDP https://www.encodeproject.org/files/ENCFF560RDP/@@download/ENCFF560RDP.bam 70.7 M 0 68.8 M 0.974 PE 100 100 native 29.7 M 0.0 M 28.9 M 0.818 0.97 0.97 39.08 205 1.06 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbe9138c-3522-4870-8c68-73c1ca6e2ca7/@@download/cross_correlation_plot/ENCFF244ELKENCFF906WRW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB139PGE michael-snyder:L-2783 "ENCFF244ELK,ENCFF906WRW" HiSeq 2000 2017-01-31T17:45:56.439181+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2801ZQ03698PJpF5b3Y6PG0 ENCSR555DCF https://www.encodeproject.org/experiments/ENCSR555DCF transcription factor ZNF512B-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF952DYI https://www.encodeproject.org/files/ENCFF952DYI/@@download/ENCFF952DYI.bam ENCFF847QUI https://www.encodeproject.org/files/ENCFF847QUI/@@download/ENCFF847QUI.bam 70.3 M 0 68.4 M 0.974 PE 100 100 native 29.5 M 0.0 M 28.8 M 0.820 0.98 0.98 47.34 210 1.05 5.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/b364972b-b779-4add-b887-d491ff9042a1/@@download/cross_correlation_plot/ENCFF530PUUENCFF285SFC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB163BSG michael-snyder:L-2784 "ENCFF285SFC,ENCFF530PUU" HiSeq 2000 2017-01-31T17:45:40.402704+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2801p803697q099FYYVZQP5 ENCSR402JAC https://www.encodeproject.org/experiments/ENCSR402JAC transcription factor ZNF574-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF991OZB https://www.encodeproject.org/files/ENCFF991OZB/@@download/ENCFF991OZB.bam ENCFF496CNA https://www.encodeproject.org/files/ENCFF496CNA/@@download/ENCFF496CNA.bam 113.7 M 0 92.9 M 0.817 PE 100 100 native 39.0 M 0.0 M 28.9 M 0.508 0.74 0.74 3.78 255 1.20 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe45aa28-f231-4b57-88af-5a8757752a28/@@download/cross_correlation_plot/ENCFF905VYBENCFF391TLW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB453YCR michael-snyder:L-2259 "ENCFF391TLW,ENCFF905VYB" HiSeq 4000 2016-09-16T03:21:28.627410+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyjy00369G2Yz4yQjpqfGY ENCSR402JAC https://www.encodeproject.org/experiments/ENCSR402JAC transcription factor ZNF574-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF933BBF https://www.encodeproject.org/files/ENCFF933BBF/@@download/ENCFF933BBF.bam ENCFF138KFR https://www.encodeproject.org/files/ENCFF138KFR/@@download/ENCFF138KFR.bam 122.3 M 0 117.1 M 0.957 PE 100 100 native 49.7 M 0.0 M 46.7 M 0.764 0.94 0.94 16.57 205 1.11 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/4bbd43f9-a79c-4887-87ad-26533f25a625/@@download/cross_correlation_plot/ENCFF653JCPENCFF277TPF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB267OPY michael-snyder:L-2634 "ENCFF277TPF,ENCFF653JCP" HiSeq 4000 2016-09-16T03:23:05.474695+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyk1j03696Pxzk584jfj40 ENCSR018MQH https://www.encodeproject.org/experiments/ENCSR018MQH transcription factor ZNF579-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF117CDU https://www.encodeproject.org/files/ENCFF117CDU/@@download/ENCFF117CDU.bam ENCFF682TFP https://www.encodeproject.org/files/ENCFF682TFP/@@download/ENCFF682TFP.bam 94.8 M 0 90.6 M 0.956 PE 100 100 native 38.5 M 0.0 M 30.7 M 0.648 0.80 0.80 4.91 240 1.05 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ba51a6e-25cc-4493-9a2c-974fa8f22e5f/@@download/cross_correlation_plot/ENCFF950ZQEENCFF645XNK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB608TWG michael-snyder:L-2251 "ENCFF645XNK,ENCFF950ZQE" HiSeq 4000 2016-10-27T22:32:48.070299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bQF80369GJ6xQfbB7F5kB ENCSR018MQH https://www.encodeproject.org/experiments/ENCSR018MQH transcription factor ZNF579-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF916MHZ https://www.encodeproject.org/files/ENCFF916MHZ/@@download/ENCFF916MHZ.bam ENCFF373GHL https://www.encodeproject.org/files/ENCFF373GHL/@@download/ENCFF373GHL.bam 148.9 M 0 110.7 M 0.743 PE 100 100 native 47.0 M 0.0 M 37.3 M 0.501 0.79 0.79 4.65 250 1.06 2.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/d42ce179-3636-4d92-84c2-1fbc0233b045/@@download/cross_correlation_plot/ENCFF970ANDENCFF359DZE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB630TJT michael-snyder:L-2252 "ENCFF359DZE,ENCFF970AND" HiSeq 4000 2016-10-27T22:38:55.148049+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bQVj03694q32PPxBJ6ZvJ ENCSR028NUR https://www.encodeproject.org/experiments/ENCSR028NUR transcription factor ZNF592-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF521YRB https://www.encodeproject.org/files/ENCFF521YRB/@@download/ENCFF521YRB.bam ENCFF033ITL https://www.encodeproject.org/files/ENCFF033ITL/@@download/ENCFF033ITL.bam 43.9 M 0 42.9 M 0.976 PE 100 100 native 18.9 M 0.0 M 17.9 M 0.818 0.95 0.95 19.50 230 1.09 6.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/fde5aa22-e18f-492f-8f9e-33e023a7a13f/@@download/cross_correlation_plot/ENCFF308IIPENCFF724LAL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB375OHG michael-snyder:L-1859 "ENCFF724LAL,ENCFF308IIP" HiSeq 2000 2016-10-09T17:34:21.576642+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62q80jv1fXGPZpVVpjYQ7 ENCSR028NUR https://www.encodeproject.org/experiments/ENCSR028NUR transcription factor ZNF592-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF014OEB https://www.encodeproject.org/files/ENCFF014OEB/@@download/ENCFF014OEB.bam ENCFF998NFM https://www.encodeproject.org/files/ENCFF998NFM/@@download/ENCFF998NFM.bam 43.2 M 0 41.6 M 0.963 PE 100 100 native 18.2 M 0.0 M 17.2 M 0.798 0.95 0.95 19.73 240 1.07 5.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba047d2b-9f9d-4b27-bac9-30615eaae8c3/@@download/cross_correlation_plot/ENCFF460NQXENCFF085YNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB882HUK michael-snyder:L-1860 "ENCFF085YNE,ENCFF460NQX" HiSeq 2000 2016-10-09T17:32:05.660906+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62x80jv1jG2Qk7JXpxvYf ENCSR701AQS https://www.encodeproject.org/experiments/ENCSR701AQS transcription factor ZNF592-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF745LPJ https://www.encodeproject.org/files/ENCFF745LPJ/@@download/ENCFF745LPJ.bam ENCFF302LHZ https://www.encodeproject.org/files/ENCFF302LHZ/@@download/ENCFF302LHZ.bam 58.8 M 0 57.3 M 0.975 PE 100 100 native 24.9 M 0.0 M 23.9 M 0.811 0.96 0.96 24.71 220 1.06 4.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/6be7a152-c98a-4340-b76b-0762817104eb/@@download/cross_correlation_plot/ENCFF264ZQHENCFF998JJX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB257LYY michael-snyder:L-1832 "ENCFF264ZQH,ENCFF998JJX" HiSeq 2000 2016-10-09T17:08:38.782435+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JgQ0jv1XvFGkBjjfjQbg ENCSR701AQS https://www.encodeproject.org/experiments/ENCSR701AQS transcription factor ZNF592-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF037WYA https://www.encodeproject.org/files/ENCFF037WYA/@@download/ENCFF037WYA.bam ENCFF862RZJ https://www.encodeproject.org/files/ENCFF862RZJ/@@download/ENCFF862RZJ.bam 52.5 M 0 50.9 M 0.968 PE 100 100 native 22.1 M 0.0 M 20.3 M 0.773 0.92 0.92 11.94 220 1.07 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee1e74ad-5457-498d-bb18-fc5f83821242/@@download/cross_correlation_plot/ENCFF630BDUENCFF847AWQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB358DLC michael-snyder:L-1833 "ENCFF630BDU,ENCFF847AWQ" HiSeq 2000 2016-10-09T17:07:33.031894+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Jk80jv1xPyfX78Yz4j8P ENCSR899BKM https://www.encodeproject.org/experiments/ENCSR899BKM transcription factor ZNF687-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF409PPI https://www.encodeproject.org/files/ENCFF409PPI/@@download/ENCFF409PPI.bam ENCFF053LCK https://www.encodeproject.org/files/ENCFF053LCK/@@download/ENCFF053LCK.bam 65.6 M 0 63.9 M 0.975 PE 100 100 native 27.7 M 0.0 M 27.2 M 0.828 0.98 0.98 52.87 215 1.08 2.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/73ad88fe-1b5a-465d-9554-88501a9cc439/@@download/cross_correlation_plot/ENCFF764PRLENCFF317PWU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB669OLV michael-snyder:L-2645 "ENCFF317PWU,ENCFF764PRL" HiSeq 2000 2016-10-09T17:04:42.396927+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BF80jv1xPyfX78Yz4j5J ENCSR899BKM https://www.encodeproject.org/experiments/ENCSR899BKM transcription factor ZNF687-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF503QVH https://www.encodeproject.org/files/ENCFF503QVH/@@download/ENCFF503QVH.bam ENCFF528GXO https://www.encodeproject.org/files/ENCFF528GXO/@@download/ENCFF528GXO.bam 60.3 M 0 58.9 M 0.976 PE 100 100 native 25.6 M 0.0 M 25.2 M 0.836 0.99 0.99 67.00 215 1.09 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a6d4b87-d048-424a-a70a-eea65d586177/@@download/cross_correlation_plot/ENCFF543WLXENCFF481RYD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB653XWX michael-snyder:L-2646 "ENCFF481RYD,ENCFF543WLX" HiSeq 2000 2016-10-09T17:04:51.423372+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BGj0jv1f60PxyZ9JGPBJ ENCSR785UCD https://www.encodeproject.org/experiments/ENCSR785UCD transcription factor ZNF8-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF010LCB https://www.encodeproject.org/files/ENCFF010LCB/@@download/ENCFF010LCB.bam ENCFF226YSY https://www.encodeproject.org/files/ENCFF226YSY/@@download/ENCFF226YSY.bam 56.7 M 0 55.1 M 0.973 PE 100 100 native 23.6 M 0.0 M 22.9 M 0.808 0.97 0.97 31.88 210 1.06 4.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/e97cd21e-b781-4072-9d79-4d5fc84dec48/@@download/cross_correlation_plot/ENCFF839WCBENCFF615EAA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB329NCM michael-snyder:L-2787 "ENCFF615EAA,ENCFF839WCB" HiSeq 2000 2017-01-31T17:44:47.282794+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28020803697q099FYYVZQPP ENCSR785UCD https://www.encodeproject.org/experiments/ENCSR785UCD transcription factor ZNF8-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF175WBA https://www.encodeproject.org/files/ENCFF175WBA/@@download/ENCFF175WBA.bam ENCFF100JTY https://www.encodeproject.org/files/ENCFF100JTY/@@download/ENCFF100JTY.bam 63.6 M 0 61.6 M 0.970 PE 100 100 native 26.4 M 0.0 M 25.4 M 0.798 0.96 0.96 25.00 215 1.05 5.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/a3c15b68-892d-47ea-95fd-f923af8459a1/@@download/cross_correlation_plot/ENCFF548RDNENCFF870PPB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB069QCF michael-snyder:L-2788 "ENCFF548RDN,ENCFF870PPB" HiSeq 2000 2017-01-31T17:45:25.552983+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28026003692z6825GGyp4kG ENCSR595LAM https://www.encodeproject.org/experiments/ENCSR595LAM transcription factor ZSCAN29-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF408WES https://www.encodeproject.org/files/ENCFF408WES/@@download/ENCFF408WES.bam ENCFF344FCB https://www.encodeproject.org/files/ENCFF344FCB/@@download/ENCFF344FCB.bam 88.2 M 0 84.0 M 0.952 PE 100 100 native 35.9 M 0.0 M 30.2 M 0.685 0.84 0.84 6.16 140 1.07 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ad8a8c1-32f6-47c8-95c8-83cb524ff8d7/@@download/cross_correlation_plot/ENCFF791EMPENCFF066RQU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB839RLF michael-snyder:L-3436 "ENCFF066RQU,ENCFF791EMP" HiSeq 4000 2017-05-05T23:29:40.223405+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469yPQ03698KGf370q9772F ENCSR595LAM https://www.encodeproject.org/experiments/ENCSR595LAM transcription factor ZSCAN29-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF037YVN https://www.encodeproject.org/files/ENCFF037YVN/@@download/ENCFF037YVN.bam ENCFF967OUM https://www.encodeproject.org/files/ENCFF967OUM/@@download/ENCFF967OUM.bam 106.4 M 0 101.2 M 0.952 PE 100 100 native 43.2 M 0.0 M 32.6 M 0.614 0.76 0.75 4.02 135 1.07 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7e78c45-3cfe-4dd5-9bf6-bb40665979c7/@@download/cross_correlation_plot/ENCFF987HWFENCFF012XMS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB544TWL michael-snyder:L-3437 "ENCFF987HWF,ENCFF012XMS" HiSeq 4000 2017-05-06T01:06:12.562161+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469yY80369KZg6P1gzFxqVG ENCSR809BYY https://www.encodeproject.org/experiments/ENCSR809BYY transcription factor ZZZ3-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF442FHE https://www.encodeproject.org/files/ENCFF442FHE/@@download/ENCFF442FHE.bam ENCFF860WQD https://www.encodeproject.org/files/ENCFF860WQD/@@download/ENCFF860WQD.bam 97.6 M 0 93.7 M 0.960 PE 100 100 native 40.3 M 0.0 M 34.6 M 0.709 0.86 0.86 6.90 155 1.06 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec20d05e-ed68-4c2c-aa6c-bd987287b234/@@download/cross_correlation_plot/ENCFF420UGFENCFF181UEE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB653HNZ michael-snyder:L-3438 "ENCFF420UGF,ENCFF181UEE" HiSeq 4000 2017-05-06T00:17:18.487482+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469ygj03696QBPJBQ1X7GB9 ENCSR809BYY https://www.encodeproject.org/experiments/ENCSR809BYY transcription factor ZZZ3-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF862TML https://www.encodeproject.org/files/ENCFF862TML/@@download/ENCFF862TML.bam ENCFF505KIP https://www.encodeproject.org/files/ENCFF505KIP/@@download/ENCFF505KIP.bam 106.5 M 0 99.8 M 0.937 PE 100 100 native 42.3 M 0.0 M 38.5 M 0.723 0.91 0.91 11.05 130 1.06 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/e131883e-b7c2-42bf-acc2-c1a9e8f01288/@@download/cross_correlation_plot/ENCFF513NCXENCFF855IYZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB786OFR michael-snyder:L-3439 "ENCFF513NCX,ENCFF855IYZ" HiSeq 4000 2017-05-06T01:07:06.036202+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469yqj0369GBq3P37KJ0KbK ENCSR000EHS https://www.encodeproject.org/experiments/ENCSR000EHS transcription factor MAX-human NB4 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR670HMY https://www.encodeproject.org/experiments/ENCSR670HMY transcription factor CEBPB-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF194YSJ https://www.encodeproject.org/files/ENCFF194YSJ/@@download/ENCFF194YSJ.bam ENCFF820NZV https://www.encodeproject.org/files/ENCFF820NZV/@@download/ENCFF820NZV.bam 26.2 M 0 25.2 M 0.962 SE 36 36 native 0.0 M 19.4 M 18.6 M 0.710 0.96 0.96 26.09 105 1.08 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3df8bc2-3cc4-42a9-88a0-1818f002652a/@@download/cross_correlation_plot/ENCFF002ECC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB845LLG michael-snyder:CEBPbeta_sc-150_SK-N-SH_Rep1 ENCFF002ECC Illumina Genome Analyzer IIx 2016-08-30T17:55:29.702691+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ1Jj03695qVFpfJBXYkFq ENCSR670HMY https://www.encodeproject.org/experiments/ENCSR670HMY transcription factor CEBPB-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF043INT https://www.encodeproject.org/files/ENCFF043INT/@@download/ENCFF043INT.bam ENCFF154ISG https://www.encodeproject.org/files/ENCFF154ISG/@@download/ENCFF154ISG.bam 34.0 M 0 33.3 M 0.979 SE 36 36 native 0.0 M 26.2 M 23.4 M 0.689 0.90 0.90 9.39 125 1.10 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/77ae72b1-869e-4043-9b45-1704967f814c/@@download/cross_correlation_plot/ENCFF002ECF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB392PYN michael-snyder:CEBPbeta_sc-150_SK-N-SH_Rep2 ENCFF002ECF Illumina Genome Analyzer IIx 2016-08-30T17:55:15.020511+00:00 in progress requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ1Q80369P2yGzP5BYGypX ENCSR274SLQ https://www.encodeproject.org/experiments/ENCSR274SLQ "RNA binding protein,transcription factor" CHD2-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF542OXT https://www.encodeproject.org/files/ENCFF542OXT/@@download/ENCFF542OXT.bam ENCFF072JKI https://www.encodeproject.org/files/ENCFF072JKI/@@download/ENCFF072JKI.bam 30.0 M 0 29.3 M 0.977 SE 36 36 native 0.0 M 22.6 M 21.6 M 0.722 0.96 0.97 38.64 110 1.20 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/020c8257-da08-4351-a25d-113b3820275b/@@download/cross_correlation_plot/ENCFF002ECE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB203HEW michael-snyder:CHD2_ab68301_SK-N-SH_Rep1 ENCFF002ECE Illumina Genome Analyzer IIx 2016-08-30T17:49:16.188039+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ4G003695Q6VfV1Bpzxg8 ENCSR274SLQ https://www.encodeproject.org/experiments/ENCSR274SLQ "RNA binding protein,transcription factor" CHD2-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF464EBS https://www.encodeproject.org/files/ENCFF464EBS/@@download/ENCFF464EBS.bam ENCFF053EOK https://www.encodeproject.org/files/ENCFF053EOK/@@download/ENCFF053EOK.bam 32.5 M 0 32.2 M 0.992 SE 36 36 native 0.0 M 26.0 M 23.8 M 0.733 0.92 0.93 15.23 115 1.24 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/a58b41a5-b433-4add-9f79-cd13e8195941/@@download/cross_correlation_plot/ENCFF002EBZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB857MKV michael-snyder:CHD2_ab68301_SK-N-SH_Rep2 ENCFF002EBZ Illumina Genome Analyzer IIx 2016-08-30T17:48:51.179840+00:00 in progress pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ4KQ0369Px4J5b5BzZf0B ENCSR000EHV https://www.encodeproject.org/experiments/ENCSR000EHV transcription factor EP300-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF466XEY https://www.encodeproject.org/files/ENCFF466XEY/@@download/ENCFF466XEY.bam ENCFF067AKD https://www.encodeproject.org/files/ENCFF067AKD/@@download/ENCFF067AKD.bam 31.7 M 0 30.5 M 0.963 SE 36 36 native 0.0 M 24.2 M 22.4 M 0.708 0.93 0.93 13.59 130 1.16 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1fb1874-b4ea-4431-9d71-2099010276f0/@@download/cross_correlation_plot/ENCFF000ZRV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOP ENCFF000ZRV Illumina Genome Analyzer 2016-12-11T08:37:21.708108+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166X500369GF0YB1zjPf794 ENCSR000EHV https://www.encodeproject.org/experiments/ENCSR000EHV transcription factor EP300-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF099HWJ https://www.encodeproject.org/files/ENCFF099HWJ/@@download/ENCFF099HWJ.bam ENCFF244VAK https://www.encodeproject.org/files/ENCFF244VAK/@@download/ENCFF244VAK.bam 32.6 M 0 31.3 M 0.961 SE 36 36 native 0.0 M 25.5 M 23.2 M 0.712 0.91 0.92 12.11 140 1.44 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/be262c6e-49be-4154-aef3-292567e924ab/@@download/cross_correlation_plot/ENCFF000ZRX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAU ENCFF000ZRX Illumina Genome Analyzer 2016-12-11T08:35:59.681485+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166XF003697yz601ypVJ3yp ENCSR422ZAO https://www.encodeproject.org/experiments/ENCSR422ZAO transcription factor IRF3-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF040MDB https://www.encodeproject.org/files/ENCFF040MDB/@@download/ENCFF040MDB.bam ENCFF052THM https://www.encodeproject.org/files/ENCFF052THM/@@download/ENCFF052THM.bam 26.9 M 0 24.7 M 0.921 SE 36 36 native 0.0 M 18.7 M 16.2 M 0.603 0.87 0.87 7.27 125 1.04 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/69154770-c26a-43b1-a9cf-8bd0c9c2babf/@@download/cross_correlation_plot/ENCFF002EWT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB406QGW michael-snyder:IRF3_sc-9082_SK-N-SH_Rep2 ENCFF002EWT Illumina Genome Analyzer IIx 2016-08-30T17:48:28.766895+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ4VQ0369F710GX9Bgbg35 ENCSR422ZAO https://www.encodeproject.org/experiments/ENCSR422ZAO transcription factor IRF3-human SK-N-SH immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF808EIJ https://www.encodeproject.org/files/ENCFF808EIJ/@@download/ENCFF808EIJ.bam ENCFF621LCK https://www.encodeproject.org/files/ENCFF621LCK/@@download/ENCFF621LCK.bam 26.8 M 0 25.7 M 0.956 SE 36 36 native 0.0 M 20.1 M 17.9 M 0.666 0.89 0.89 9.13 135 1.05 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/529bfeee-a2fd-43d0-9464-ee84e7028568/@@download/cross_correlation_plot/ENCFF002EWN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB086FNB michael-snyder:IRF3_sc-9082_SK-N-SH_Rep3 ENCFF002EWN Illumina Genome Analyzer IIx 2016-08-30T17:48:08.318465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ4Z00369P2yGzP5BYGyxJ ENCSR000EIB https://www.encodeproject.org/experiments/ENCSR000EIB transcription factor JUND-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF655YHQ https://www.encodeproject.org/files/ENCFF655YHQ/@@download/ENCFF655YHQ.bam ENCFF394ZFD https://www.encodeproject.org/files/ENCFF394ZFD/@@download/ENCFF394ZFD.bam 28.2 M 0 26.8 M 0.953 SE 36 36 native 0.0 M 20.9 M 19.7 M 0.701 0.95 0.95 18.50 125 1.14 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/81fbc67f-85b6-42e8-bb63-8db45ecb7a8e/@@download/cross_correlation_plot/ENCFF000ZQV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKD ENCFF000ZQV Illumina Genome Analyzer 2016-11-30T18:11:28.377808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4Vg00369KGzVG4GJz9Fkp ENCSR000EIB https://www.encodeproject.org/experiments/ENCSR000EIB transcription factor JUND-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF017ICG https://www.encodeproject.org/files/ENCFF017ICG/@@download/ENCFF017ICG.bam ENCFF392FUM https://www.encodeproject.org/files/ENCFF392FUM/@@download/ENCFF392FUM.bam 27.8 M 0 26.1 M 0.937 SE 36 36 native 0.0 M 20.0 M 18.5 M 0.665 0.93 0.93 13.88 125 1.27 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/f76bb594-81b8-4c79-adfe-cab1cc61d366/@@download/cross_correlation_plot/ENCFF000ZQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKC ENCFF000ZQY Illumina Genome Analyzer 2016-11-30T18:11:31.799053+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4VqQ036985fFbV0Z7XfJy ENCSR000EIA https://www.encodeproject.org/experiments/ENCSR000EIA transcription factor MXI1-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF955PGN https://www.encodeproject.org/files/ENCFF955PGN/@@download/ENCFF955PGN.bam ENCFF828EYM https://www.encodeproject.org/files/ENCFF828EYM/@@download/ENCFF828EYM.bam 33.0 M 0 32.4 M 0.982 SE 36 36 native 0.0 M 26.3 M 23.4 M 0.709 0.89 0.89 9.33 115 1.29 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/009666f2-f337-4bae-82a9-dcdd3468c250/@@download/cross_correlation_plot/ENCFF000ZRE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEL ENCFF000ZRE Illumina Genome Analyzer 2016-12-11T04:14:17.148421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165BQ80369GF0YB1zjPf6vq ENCSR000EIA https://www.encodeproject.org/experiments/ENCSR000EIA transcription factor MXI1-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF349TVK https://www.encodeproject.org/files/ENCFF349TVK/@@download/ENCFF349TVK.bam ENCFF277EQB https://www.encodeproject.org/files/ENCFF277EQB/@@download/ENCFF277EQB.bam 27.9 M 0 26.5 M 0.949 SE 36 36 native 0.0 M 21.0 M 18.7 M 0.669 0.89 0.89 8.68 125 1.16 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/07a09ed6-b229-4735-9136-777ac9f0a08d/@@download/cross_correlation_plot/ENCFF000ZRG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGI ENCFF000ZRG Illumina Genome Analyzer 2016-12-11T04:11:04.649571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Bb80369PvYp91zK1PxVB ENCSR000EHZ https://www.encodeproject.org/experiments/ENCSR000EHZ transcription factor NRF1-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF854WDA https://www.encodeproject.org/files/ENCFF854WDA/@@download/ENCFF854WDA.bam ENCFF540OFL https://www.encodeproject.org/files/ENCFF540OFL/@@download/ENCFF540OFL.bam 29.6 M 0 27.4 M 0.925 SE 36 36 native 0.0 M 21.3 M 19.1 M 0.644 0.90 0.90 10.38 110 1.30 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e92d5bf-8301-405c-a089-2a1368db17c7/@@download/cross_correlation_plot/ENCFF000ZRN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAW ENCFF000ZRN Illumina Genome Analyzer 2016-12-11T08:42:19.666735+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166XV00369BV55708G9qbbg ENCSR000EHZ https://www.encodeproject.org/experiments/ENCSR000EHZ transcription factor NRF1-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF677UDU https://www.encodeproject.org/files/ENCFF677UDU/@@download/ENCFF677UDU.bam ENCFF018AZV https://www.encodeproject.org/files/ENCFF018AZV/@@download/ENCFF018AZV.bam 20.7 M 0 16.8 M 0.810 SE 36 36 native 0.0 M 12.9 M 10.3 M 0.497 0.80 0.80 4.73 115 1.60 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/809dd7ea-6cb2-4460-9519-9d451c66a2e1/@@download/cross_correlation_plot/ENCFF000ZRP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALJ ENCFF000ZRP Illumina Genome Analyzer 2016-12-11T05:04:26.383591+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Xf80369KQ3Yk1yz1kj2y ENCSR000EHX https://www.encodeproject.org/experiments/ENCSR000EHX transcription factor RAD21-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF806TYP https://www.encodeproject.org/files/ENCFF806TYP/@@download/ENCFF806TYP.bam ENCFF833CKI https://www.encodeproject.org/files/ENCFF833CKI/@@download/ENCFF833CKI.bam 31.3 M 0 30.5 M 0.974 SE 36 36 native 0.0 M 24.6 M 21.9 M 0.698 0.89 0.91 12.87 115 2.05 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa9dd84d-bec5-46e3-b6f6-d141d9612779/@@download/cross_correlation_plot/ENCFF000ZSD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEG ENCFF000ZSD Illumina Genome Analyzer 2016-12-11T06:49:23.922112+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Q0003692yykb1zBpz860 ENCSR000EHX https://www.encodeproject.org/experiments/ENCSR000EHX transcription factor RAD21-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF502NTX https://www.encodeproject.org/files/ENCFF502NTX/@@download/ENCFF502NTX.bam ENCFF475FAR https://www.encodeproject.org/files/ENCFF475FAR/@@download/ENCFF475FAR.bam 33.1 M 0 32.9 M 0.993 SE 36 36 native 0.0 M 27.7 M 22.6 M 0.682 0.82 0.85 7.66 125 2.38 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/17346d6a-c779-469c-8247-16314701c022/@@download/cross_correlation_plot/ENCFF000ZSF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALK ENCFF000ZSF Illumina Genome Analyzer 2016-12-11T08:37:55.060907+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Q5j0369KbxV61z4GFx0X ENCSR009TKN https://www.encodeproject.org/experiments/ENCSR009TKN transcription factor RCOR1-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF782XEN https://www.encodeproject.org/files/ENCFF782XEN/@@download/ENCFF782XEN.bam ENCFF864QZM https://www.encodeproject.org/files/ENCFF864QZM/@@download/ENCFF864QZM.bam 32.3 M 0 31.3 M 0.970 SE 36 36 native 0.0 M 24.5 M 23.2 M 0.721 0.95 0.95 20.46 110 1.09 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdf51255-9c67-40ba-9cfe-1e5e7e048481/@@download/cross_correlation_plot/ENCFF002ECI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB147KXE michael-snyder:CoREST_sc-30189_SK-N-SH_Rep1 ENCFF002ECI Illumina Genome Analyzer IIx 2016-08-30T17:54:36.511933+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ1k00369BQ7VQPxBqP1Kg ENCSR009TKN https://www.encodeproject.org/experiments/ENCSR009TKN transcription factor RCOR1-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF341ZOE https://www.encodeproject.org/files/ENCFF341ZOE/@@download/ENCFF341ZOE.bam ENCFF731WRW https://www.encodeproject.org/files/ENCFF731WRW/@@download/ENCFF731WRW.bam 31.9 M 0 31.4 M 0.983 SE 36 36 native 0.0 M 24.9 M 23.5 M 0.736 0.95 0.95 18.35 120 1.20 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/10446a55-a923-40bf-9e2c-bb5f3a933608/@@download/cross_correlation_plot/ENCFF002ECK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB056NEL michael-snyder:CoREST_sc-30189_SK-N-SH_Rep2 ENCFF002ECK Illumina Genome Analyzer IIx 2016-08-30T17:54:28.692422+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ1q80369F710GX9Bgbg10 ENCSR000EHW https://www.encodeproject.org/experiments/ENCSR000EHW transcription factor SMC3-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF412VEJ https://www.encodeproject.org/files/ENCFF412VEJ/@@download/ENCFF412VEJ.bam ENCFF693KEX https://www.encodeproject.org/files/ENCFF693KEX/@@download/ENCFF693KEX.bam 26.5 M 0 25.5 M 0.962 SE 36 36 native 0.0 M 20.4 M 19.0 M 0.718 0.94 0.94 17.97 110 1.65 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/554cc434-a83b-4a8a-8fbf-ad5f9e435340/@@download/cross_correlation_plot/ENCFF000ZSS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APG ENCFF000ZSS Illumina Genome Analyzer 2016-12-11T04:01:48.236797+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1651JQ0369GF0YB1zjPf6kv ENCSR000EHW https://www.encodeproject.org/experiments/ENCSR000EHW transcription factor SMC3-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF276BPO https://www.encodeproject.org/files/ENCFF276BPO/@@download/ENCFF276BPO.bam ENCFF116QFT https://www.encodeproject.org/files/ENCFF116QFT/@@download/ENCFF116QFT.bam 25.1 M 0 23.8 M 0.951 SE 36 36 native 0.0 M 18.3 M 17.1 M 0.684 0.94 0.94 15.75 120 1.27 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9492386-bdde-4f87-8a04-f39faf7f5621/@@download/cross_correlation_plot/ENCFF000ZSU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AID ENCFF000ZSU Illumina Genome Analyzer 2016-12-11T04:01:13.643004+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1651X00369KbxV61z4GFvVJ