Index of /kundaje/marinovg/oak/various/papers/2021_STARMethods_Maya_neuronal_ATAC/2021-03-31-figures
Name
Last modified
Size
Description
Parent Directory
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24_10_GFP_1_S3.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:54
7.9K
24_10_GFP_1_S3.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:22
13M
24_10_GFP_1_S3.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.2M
24_10_GFP_1_S3.2x36mers.mm10.unique.nochrM.dedup.TSS-1000bp.RPM
2021-07-10 00:37
1.8M
24_10_GFP_1_S3.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
24_10_GFP_1_S3.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.5K
24_10_GFP_1_S3.fastq.lines
2021-04-01 07:39
9
24_10_GFP_2_S4.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:56
8.1K
24_10_GFP_2_S4.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
12M
24_10_GFP_2_S4.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.2M
24_10_GFP_2_S4.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:25
164K
24_10_GFP_2_S4.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:36
2.5K
24_10_GFP_2_S4.fastq.lines
2021-04-01 07:40
9
24_10_None_1_S1.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:55
8.0K
24_10_None_1_S1.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:23
8.4M
24_10_None_1_S1.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
1.5M
24_10_None_1_S1.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
24_10_None_1_S1.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:36
2.5K
24_10_None_1_S1.fastq.lines
2021-04-01 07:40
9
24_10_None_2_S2.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:53
7.8K
24_10_None_2_S2.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
9.1M
24_10_None_2_S2.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:27
1.7M
24_10_None_2_S2.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:25
164K
24_10_None_2_S2.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.5K
24_10_None_2_S2.fastq.lines
2021-04-01 07:40
9
24_10_PR_1_S7.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:55
8.1K
24_10_PR_1_S7.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:29
12M
24_10_PR_1_S7.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.1M
24_10_PR_1_S7.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:25
164K
24_10_PR_1_S7.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:36
2.5K
24_10_PR_1_S7.fastq.lines
2021-04-01 07:40
9
24_10_PR_2_S8.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:53
7.9K
24_10_PR_2_S8.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
11M
24_10_PR_2_S8.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:27
2.0M
24_10_PR_2_S8.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:25
164K
24_10_PR_2_S8.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.5K
24_10_PR_2_S8.fastq.lines
2021-04-01 07:40
9
24_10_TDP_1_S5.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:54
7.9K
24_10_TDP_1_S5.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:21
12M
24_10_TDP_1_S5.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:27
2.2M
24_10_TDP_1_S5.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
24_10_TDP_1_S5.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.5K
24_10_TDP_1_S5.fastq.lines
2021-04-01 07:40
9
24_10_TDP_2_S6.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:53
8.0K
24_10_TDP_2_S6.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:21
10M
24_10_TDP_2_S6.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:27
1.9M
24_10_TDP_2_S6.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
24_10_TDP_2_S6.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.5K
24_10_TDP_2_S6.fastq.lines
2021-04-01 07:40
9
25_10_GFP_1_S11.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:53
8.1K
25_10_GFP_1_S11.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
13M
25_10_GFP_1_S11.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.2M
25_10_GFP_1_S11.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:25
164K
25_10_GFP_1_S11.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.6K
25_10_GFP_1_S11.fastq.lines
2021-04-01 07:40
9
25_10_GFP_2_S12.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:57
8.2K
25_10_GFP_2_S12.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:21
15M
25_10_GFP_2_S12.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:29
2.5M
25_10_GFP_2_S12.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
25_10_GFP_2_S12.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:36
2.5K
25_10_GFP_2_S12.fastq.lines
2021-04-01 07:40
9
25_10_None_1_S9.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:53
8.0K
25_10_None_1_S9.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
11M
25_10_None_1_S9.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:27
2.0M
25_10_None_1_S9.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
25_10_None_1_S9.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.5K
25_10_None_1_S9.fastq.lines
2021-04-01 07:40
9
25_10_None_2_S10.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:54
8.1K
25_10_None_2_S10.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
11M
25_10_None_2_S10.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.0M
25_10_None_2_S10.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
25_10_None_2_S10.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.5K
25_10_None_2_S10.fastq.lines
2021-04-01 07:40
9
25_10_PR_1_S15.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:54
8.2K
25_10_PR_1_S15.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
12M
25_10_PR_1_S15.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.2M
25_10_PR_1_S15.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
25_10_PR_1_S15.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.5K
25_10_PR_1_S15.fastq.lines
2021-04-01 07:40
9
25_10_PR_2_S16.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:52
8.0K
25_10_PR_2_S16.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
11M
25_10_PR_2_S16.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:27
1.9M
25_10_PR_2_S16.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
25_10_PR_2_S16.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.6K
25_10_PR_2_S16.fastq.lines
2021-04-01 07:40
9
25_10_TDP_1_S13.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:53
8.1K
25_10_TDP_1_S13.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
12M
25_10_TDP_1_S13.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.1M
25_10_TDP_1_S13.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
25_10_TDP_1_S13.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.6K
25_10_TDP_1_S13.fastq.lines
2021-04-01 07:40
9
25_10_TDP_2_S14.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:53
8.1K
25_10_TDP_2_S14.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
12M
25_10_TDP_2_S14.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.2M
25_10_TDP_2_S14.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:27
164K
25_10_TDP_2_S14.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.5K
25_10_TDP_2_S14.fastq.lines
2021-04-01 07:41
9
26_10_GFP_1_S19.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:55
8.0K
26_10_GFP_1_S19.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
15M
26_10_GFP_1_S19.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.5M
26_10_GFP_1_S19.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:27
164K
26_10_GFP_1_S19.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.5K
26_10_GFP_1_S19.fastq.lines
2021-04-01 07:41
9
26_10_GFP_2_S20.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:56
8.1K
26_10_GFP_2_S20.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
13M
26_10_GFP_2_S20.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.4M
26_10_GFP_2_S20.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:27
164K
26_10_GFP_2_S20.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.5K
26_10_GFP_2_S20.fastq.lines
2021-04-01 07:41
9
26_10_None_1_S17.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:56
8.0K
26_10_None_1_S17.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
14M
26_10_None_1_S17.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.5M
26_10_None_1_S17.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:27
164K
26_10_None_1_S17.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.5K
26_10_None_1_S17.fastq.lines
2021-04-01 07:41
9
26_10_None_2_S18.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:56
8.1K
26_10_None_2_S18.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
14M
26_10_None_2_S18.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.5M
26_10_None_2_S18.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
26_10_None_2_S18.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.5K
26_10_None_2_S18.fastq.lines
2021-04-01 07:41
9
26_10_PR_1_S23.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:54
8.0K
26_10_PR_1_S23.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
12M
26_10_PR_1_S23.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:28
2.2M
26_10_PR_1_S23.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:27
164K
26_10_PR_1_S23.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.5K
26_10_PR_1_S23.fastq.lines
2021-04-01 07:41
9
26_10_PR_2_S24.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:53
7.9K
26_10_PR_2_S24.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:19
9.8M
26_10_PR_2_S24.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:27
1.8M
26_10_PR_2_S24.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:26
164K
26_10_PR_2_S24.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:34
2.5K
26_10_PR_2_S24.fastq.lines
2021-04-01 07:41
9
26_10_TDP_1_S21.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:56
8.0K
26_10_TDP_1_S21.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
11M
26_10_TDP_1_S21.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:29
2.1M
26_10_TDP_1_S21.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:27
164K
26_10_TDP_1_S21.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:35
2.5K
26_10_TDP_1_S21.fastq.lines
2021-04-01 07:41
9
26_10_TDP_2_S22.2x36mers.mm10.unique.nochrM.dedup.InsLen
2021-04-01 13:56
8.1K
26_10_TDP_2_S22.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.RPM
2021-04-02 05:20
13M
26_10_TDP_2_S22.2x36mers.mm10.unique.nochrM.dedup.MACS2-PE_peaks.narrowPeak.gz
2021-04-02 01:29
2.2M
26_10_TDP_2_S22.2x36mers.mm10.unique.nochrM.dedup.TSS_profile
2021-04-02 01:27
164K
26_10_TDP_2_S22.2x36mers.mm10.unique.nochrM.dedup.metrics
2021-04-01 08:36
2.5K
26_10_TDP_2_S22.fastq.lines
2021-04-01 07:41
10
ATACTSSscore.txt
2021-04-02 05:16
2.9K
C2C12-60h-NRSF-IDR.ENCFF368VWJ.bed.gz
2021-03-12 12:24
57K
DESeq2/
2021-07-12 22:33
-
FIMO-CIS-BP-Mus_musculus.mm10.Ctcf
2021-07-14 23:12
83M
FIMO-CIS-BP-Mus_musculus.mm10.Ctcf-vsMEL-CTCF-IDR.ENCFF393REY-intersection1
2021-07-14 23:16
3.7M
FIMO-CIS-BP-Mus_musculus.mm10.Ctcf-vsMEL-CTCF-IDR.ENCFF393REY-outersection2
2021-07-14 23:16
161K
FIMO-CIS-BP-Mus_musculus.mm10.Rest
2021-07-14 23:12
121M
FIMO-CIS-BP-Mus_musculus.mm10.Rest-vs-C2C12-60h-NRSF-IDR.ENCFF368VWJ-intersection1
2021-07-14 23:16
366K
FIMO-CIS-BP-Mus_musculus.mm10.Rest-vs-C2C12-60h-NRSF-IDR.ENCFF368VWJ-outersection2
2021-07-14 23:16
92K
MACS.peaks.200merge.500bp.table
2021-07-12 03:16
15M
MACS.peaks.400merge.400bp.counts.files
2021-07-12 03:27
1.6K
MACS.peaks.400merge.400bp.counts.table
2021-07-12 03:27
27M
MACS.peaks.400merge.400bp.table
2021-07-12 03:16
13M
MACS.peaks.500merge.200bp.table
2021-07-12 03:16
13M
MACS.peaks.500merge.500bp.table
2021-07-12 03:16
13M
MACS2.peaks.RPM.files
2021-07-12 03:15
2.6K
MEL-CTCF-IDR.ENCFF393REY.bed.gz
2020-10-20 08:24
644K
SAMstats-files.tar.gz
2021-04-01 22:53
2.9K
SAMstats.chrM.table
2021-04-01 22:53
1.4K
SAMstats.files
2021-04-01 22:48
8.3K
SAMstats.table
2021-04-01 22:52
6.7K
SAMstats.unique.nochrM.dedup.table
2021-04-01 22:53
1.9K
SAMstats.unique.table
2021-04-01 22:53
1.7K
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