xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation= xmlns:fimo="http://noble.gs.washington.edu/schema/fimo" > fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_3 --bgfile ./background --motif 3-CGGTGATGHCGR streme_out/streme.xml ./all.fixed.TSS-upstream200bp.fa fimo_out_3 streme_out/streme.xml ./all.fixed.TSS-upstream200bp.fa ./background true true true false true 0.0001 p-value 100000 0.1 1 3-CGGTGATGHCGR 0.172 0.328 0.328 0.172 cisml.xml