xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation= xmlns:fimo="http://noble.gs.washington.edu/schema/fimo" > fimo --max-stored-scores 10000000000 --oc FIMO-appMEMECHIP_5.4.all.fixed.TSS-upstream200bp appMEMECHIP_5.4.all.fixed.TSS-upstream200bp/combined.meme /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/sequence/all.fa FIMO-appMEMECHIP_5.4.all.fixed.TSS-upstream200bp appMEMECHIP_5.4.all.fixed.TSS-upstream200bp/combined.meme /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Haloferax_volcanii_DS2_uid46845/sequence/all.fa --nrdb-- true true false false true 0.0001 p-value -2147483648 0.1 2 0.275 0.225 0.225 0.275 cisml.xml